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<front>
<journal-meta>
<journal-id journal-id-type="publisher">BG</journal-id>
<journal-title-group>
<journal-title>Biogeosciences</journal-title>
<abbrev-journal-title abbrev-type="publisher">BG</abbrev-journal-title>
<abbrev-journal-title abbrev-type="nlm-ta">Biogeosciences</abbrev-journal-title>
</journal-title-group>
<issn pub-type="epub">1726-4189</issn>
<publisher><publisher-name>Copernicus Publications</publisher-name>
<publisher-loc>Göttingen, Germany</publisher-loc>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.5194/bg-10-6851-2013</article-id>
<title-group>
<article-title>Anammox, denitrification and dissimilatory nitrate reduction to ammonium in the East China Sea sediment</article-title>
</title-group>
<contrib-group><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Song</surname>
<given-names>G. D.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Liu</surname>
<given-names>S. M.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Marchant</surname>
<given-names>H.</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Kuypers</surname>
<given-names>M. M. M.</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Lavik</surname>
<given-names>G.</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
</contrib>
</contrib-group><aff id="aff1">
<label>1</label>
<addr-line>Key Laboratory of Marine Chemistry Theory and Technology, Ministry of Education, College of Chemistry and Chemical Engineering, Ocean University of China, 238 Songling Road, 266100 Qingdao, China</addr-line>
</aff>
<aff id="aff2">
<label>2</label>
<addr-line>Department of Biogeochemistry, Max Planck Institute for Marine Microbiology, Celsiusstrasse 1, 28359 Bremen, Germany</addr-line>
</aff>
<pub-date pub-type="epub">
<day>02</day>
<month>11</month>
<year>2013</year>
</pub-date>
<volume>10</volume>
<issue>11</issue>
<fpage>6851</fpage>
<lpage>6864</lpage>
<permissions>
<copyright-statement>Copyright: &#x000a9; 2013 G. D. Song et al.</copyright-statement>
<copyright-year>2013</copyright-year>
<license license-type="open-access">
<license-p>This work is licensed under the Creative Commons Attribution 3.0 Unported License. To view a copy of this licence, visit <ext-link ext-link-type="uri"  xlink:href="https://creativecommons.org/licenses/by/3.0/">https://creativecommons.org/licenses/by/3.0/</ext-link></license-p>
</license>
</permissions>
<self-uri xlink:href="https://bg.copernicus.org/articles/10/6851/2013/bg-10-6851-2013.html">This article is available from https://bg.copernicus.org/articles/10/6851/2013/bg-10-6851-2013.html</self-uri>
<self-uri xlink:href="https://bg.copernicus.org/articles/10/6851/2013/bg-10-6851-2013.pdf">The full text article is available as a PDF file from https://bg.copernicus.org/articles/10/6851/2013/bg-10-6851-2013.pdf</self-uri>
<abstract>
<p>Benthic nitrogen transformation pathways were investigated in the sediment
of the East China Sea (ECS) in June of 2010 using the &lt;sup&gt;15&lt;/sup&gt;N isotope
pairing technique. Slurry incubations indicated that denitrification,
anammox and dissimilatory nitrate reduction to ammonium (DNRA) as well as
intracellular nitrate release occurred in the ECS sediments. These four
processes did not exist independently, nitrate release therefore diluted the
&lt;sup&gt;15&lt;/sup&gt;N labeling fraction of NO&lt;sub&gt;3&lt;/sub&gt;&lt;sup&gt;&amp;minus;&lt;/sup&gt;, and a part of the
&lt;sup&gt;15&lt;/sup&gt;NH&lt;sub&gt;4&lt;/sub&gt;&lt;sup&gt;+&lt;/sup&gt; derived from DNRA also formed &lt;sup&gt;30&lt;/sup&gt;N&lt;sub&gt;2&lt;/sub&gt; via
anammox. Therefore, current methods of rate calculations led to over and
underestimations of anammox and denitrification respectively. Following the
procedure outlined in Thamdrup and Dalsgaard (2002), denitrification rates
were slightly underestimated by an average 6% without regard to the
effect of nitrate release, while this underestimation could be counteracted
by the presence of DNRA. On the contrary, anammox rates calculated from
&lt;sup&gt;15&lt;/sup&gt;NO&lt;sub&gt;3&lt;/sub&gt;&lt;sup&gt;&amp;minus;&lt;/sup&gt; experiment were significantly overestimated by 42%
without considering nitrate release. In our study, this overestimation could
only be compensated 14% by taking DNRA into consideration. In a parallel
experiment amended with &lt;sup&gt;15&lt;/sup&gt;NH&lt;sub&gt;4&lt;/sub&gt;&lt;sup&gt;+&lt;/sup&gt;+&lt;sup&gt;14&lt;/sup&gt;NO&lt;sub&gt;3&lt;/sub&gt;&lt;sup&gt;&amp;minus;&lt;/sup&gt;,
anammox rates were not significantly influenced by DNRA due to the high
background of &lt;sup&gt;15&lt;/sup&gt;NH&lt;sub&gt;4&lt;/sub&gt;&lt;sup&gt;+&lt;/sup&gt; addition. The significant correlation
between potential denitrification rate and sediment organic matter content
(&lt;i&gt;r&lt;/i&gt; = 0.68, &lt;i&gt;p&lt;/i&gt; &lt; 0.001, Pearson) indicated that denitrification was
regulated by organic matter, while, no such correlations were found for
anammox and DNRA. The relative contribution of anammox to the total N-loss
increased from 13% at the shallowest site near the Changjiang estuary to
50% at the deepest site on the outer shelf, implying the significant role
of anammox in benthic nitrogen cycling in the ECS sediments, especially on
the outer shelf. N-loss as N&lt;sub&gt;2&lt;/sub&gt; was the main pathway, while DNRA was also
an important pathway accounting for 20–31% of benthic nitrate reduction
in the ECS. Our study demonstrates the complicated interactions among
different benthic nitrogen transformations and the importance of considering
denitrification, DNRA, anammox and nitrate release together when designing
and interpreting future studies.</p>
</abstract>
<counts><page-count count="14"/></counts>
</article-meta>
</front>
<body/>
<back>
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