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  <front>
    <journal-meta>
<journal-id journal-id-type="publisher">BG</journal-id>
<journal-title-group>
<journal-title>Biogeosciences</journal-title>
<abbrev-journal-title abbrev-type="publisher">BG</abbrev-journal-title>
<abbrev-journal-title abbrev-type="nlm-ta">Biogeosciences</abbrev-journal-title>
</journal-title-group>
<issn pub-type="epub">1726-4189</issn>
<publisher><publisher-name>Copernicus Publications</publisher-name>
<publisher-loc>Göttingen, Germany</publisher-loc>
</publisher>
</journal-meta>

    <article-meta>
      <article-id pub-id-type="doi">10.5194/bg-13-1163-2016</article-id><title-group><article-title>Apparent increase in coccolithophore abundance in the subtropical North Atlantic from 1990 to 2014</article-title>
      </title-group><?xmltex \runningtitle{Coccolithophores in North Atlantic}?><?xmltex \runningauthor{K.~M. Krumhardt et al.}?>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1">
          <name><surname>Krumhardt</surname><given-names>Kristen M.</given-names></name>
          <email>kristen.krumhardt@colorado.edu</email>
        <ext-link>https://orcid.org/0000-0002-8980-056X</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Lovenduski</surname><given-names>Nicole S.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-5893-1009</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Freeman</surname><given-names>Natalie M.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-4718-5650</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Bates</surname><given-names>Nicholas R.</given-names></name>
          
        </contrib>
        <aff id="aff1"><label>1</label><institution>Environmental Studies Program and Institute of Arctic and Alpine Research, University of Colorado Boulder, Boulder, Colorado, USA</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>Department of Atmospheric and Oceanic Sciences and Institute of Arctic and Alpine Research, University of Colorado Boulder, Boulder, Colorado, USA</institution>
        </aff>
        <aff id="aff3"><label>3</label><institution>Bermuda Institute of Ocean Sciences, Ferry Reach, Bermuda</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Kristen M. Krumhardt (kristen.krumhardt@colorado.edu)</corresp></author-notes><pub-date><day>25</day><month>February</month><year>2016</year></pub-date>
      
      <volume>13</volume>
      <issue>4</issue>
      <fpage>1163</fpage><lpage>1177</lpage>
      <history>
        <date date-type="received"><day>5</day><month>November</month><year>2015</year></date>
           <date date-type="rev-request"><day>18</day><month>November</month><year>2015</year></date>
           <date date-type="rev-recd"><day>11</day><month>February</month><year>2016</year></date>
           <date date-type="accepted"><day>12</day><month>February</month><year>2016</year></date>
      </history>
      <permissions>
<license license-type="open-access">
<license-p>This work is licensed under a Creative Commons Attribution 3.0 Unported License. To view a copy of this license, visit <ext-link ext-link-type="uri" xlink:href="http://creativecommons.org/licenses/by/3.0/">http://creativecommons.org/licenses/by/3.0/</ext-link></license-p>
</license>
</permissions><self-uri xlink:href="https://bg.copernicus.org/articles/13/1163/2016/bg-13-1163-2016.html">This article is available from https://bg.copernicus.org/articles/13/1163/2016/bg-13-1163-2016.html</self-uri>
<self-uri xlink:href="https://bg.copernicus.org/articles/13/1163/2016/bg-13-1163-2016.pdf">The full text article is available as a PDF file from https://bg.copernicus.org/articles/13/1163/2016/bg-13-1163-2016.pdf</self-uri>


      <abstract>
    <p>As environmental conditions evolve with rapidly increasing atmospheric
CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>, biological communities will change as species reorient their
distributions, adapt, or alter their abundance. In the surface ocean,
dissolved inorganic carbon (DIC) has been increasing over the past several
decades as anthropogenic CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> dissolves into seawater, causing
acidification (decreases in pH and carbonate ion concentration). Calcifying
phytoplankton, such as coccolithophores, are thought to be especially
vulnerable to ocean acidification. How coccolithophores will respond to
increasing carbon input has been a subject of much speculation and inspired
numerous laboratory and mesocosm experiments, but how they are currently
responding in situ is less well documented. In this study, we use
coccolithophore (haptophyte) pigment data collected at the Bermuda Atlantic
Time-series Study (BATS) site together with satellite estimates (1998–2014)
of surface chlorophyll and particulate inorganic carbon (PIC) as a proxy for
coccolithophore abundance to show that coccolithophore populations in the
North Atlantic subtropical gyre have been increasing significantly over the
past 2 decades. Over 1990–2012, we observe a 37 % increase in euphotic
zone-integrated coccolithophore pigment abundance at BATS, though we note
that this is sensitive to the period being analyzed. We further demonstrate
that variability in coccolithophore chlorophyll <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> here is positively
correlated with variability in nitrate and DIC (and especially the
bicarbonate ion) in the upper 30 m of the water column. Previous studies
have suggested that coccolithophore photosynthesis may benefit from
increasing CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>, but calcification may eventually be hindered by low
pH<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mi>T</mml:mi></mml:msub></mml:math></inline-formula> (<inline-formula><mml:math display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula> 7.7). Given that DIC has been increasing at BATS by <inline-formula><mml:math display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn>1.4</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>mol kg<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> yr<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> over the period of 1991–2012, we
speculate that coccolithophore photosynthesis and perhaps calcification may
have increased in response to anthropogenic CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> input.</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <title>Introduction</title>
      <p>Coccolithophores are the most abundant type of calcifying phytoplankton in
the ocean. Belonging to the phytoplankton group known as haptophytes,
coccolithophores generate a substantial fraction of the primary production in
many diverse marine environments from cold, sub-polar waters to warm,
tropical waters <xref ref-type="bibr" rid="bib1.bibx63" id="paren.1"/>. Coccolithophores produce calcium
carbonate (CaCO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula>) shells that sink to the deep ocean forming chalk
deposits and thus are important for global biogeochemical cycling of carbon
and climate feedbacks. Furthermore, coccolithophores comprise the base of
many marine food webs and are widespread throughout the world ocean
<xref ref-type="bibr" rid="bib1.bibx15" id="paren.2"/>. Changes in coccolithophore abundance could therefore
have far-reaching effects from the ecosystem level to global carbon cycling
<xref ref-type="bibr" rid="bib1.bibx15" id="paren.3"/>.</p>
      <p>Ocean acidification from the gradual oceanic absorption of anthropogenic
<inline-formula><mml:math display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> has been projected to impact future coccolithophore
populations, possibly disrupting the formation and/or dissolution of their
CaCO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> shells <xref ref-type="bibr" rid="bib1.bibx23 bib1.bibx42" id="paren.4"><named-content content-type="pre">e.g.,</named-content></xref>. As <inline-formula><mml:math display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> is
absorbed from the atmosphere, it reacts with water releasing hydrogen ions
(H<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>+</mml:mo></mml:msup></mml:math></inline-formula>) and increasing dissolved inorganic carbon (DIC). Excess H<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>+</mml:mo></mml:msup></mml:math></inline-formula>
ions and more DIC in the water column lead to a decrease in the carbonate ion
(CO<inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mi/><mml:mn mathvariant="normal">3</mml:mn><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mo>-</mml:mo></mml:mrow></mml:msubsup></mml:mrow></mml:math></inline-formula>) concentration in the ocean <xref ref-type="bibr" rid="bib1.bibx12" id="paren.5"><named-content content-type="pre">for an overview of
<inline-formula><mml:math display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>-carbonate chemistry see</named-content></xref>. Lower <inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mtext>CO</mml:mtext><mml:mn mathvariant="normal">3</mml:mn><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mo>-</mml:mo></mml:mrow></mml:msubsup></mml:mrow></mml:math></inline-formula> concentrations decrease the saturation state of CaCO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> and could
result in lower calcification rates in coccolithophores. Recently,
<xref ref-type="bibr" rid="bib1.bibx4" id="text.6"/> proposed that a substrate-inhibitor ratio may be a better
indicator of potential biocalcification rates. Bicarbonate ions (HCO<inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mi/><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>)
are the substrate for calcification in most calcifying organisms, but high
concentrations of <inline-formula><mml:math display="inline"><mml:mrow class="chem"><mml:msup><mml:mi mathvariant="normal">H</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> ions can limit calcification. Therefore,
a decreasing <inline-formula><mml:math display="inline"><mml:mrow><mml:mo>[</mml:mo><mml:mrow class="chem"><mml:msubsup><mml:mi mathvariant="normal">HCO</mml:mi><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mrow><mml:mo>[</mml:mo><mml:mrow class="chem"><mml:msup><mml:mi mathvariant="normal">H</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula> ratio may eventually
hinder calcification, rather than low <inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mtext>CO</mml:mtext><mml:mn mathvariant="normal">3</mml:mn><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mo>-</mml:mo></mml:mrow></mml:msubsup></mml:mrow></mml:math></inline-formula> concentrations.
Even so, other factors (e.g., nutrient and light limitation) could exert a
stronger control on calcification than carbonate chemistry
<xref ref-type="bibr" rid="bib1.bibx6" id="paren.7"/>. A CO<inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mi/><mml:mn mathvariant="normal">3</mml:mn><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mo>-</mml:mo></mml:mrow></mml:msubsup></mml:mrow></mml:math></inline-formula> saturation state of less than 1 would
still, however, cause the dissolution of CaCO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> shells. Speculation of how
coccolithophores will respond to increasing DIC and acidification (i.e., the
balance between CaCO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> production vs. dissolution) has been the subject of
many laboratory and mesocosm studies <xref ref-type="bibr" rid="bib1.bibx34 bib1.bibx58 bib1.bibx52" id="paren.8"><named-content content-type="pre">e.g.,</named-content></xref>. These, however, have yielded mixed results,
highlighting the complexity of biological responses to these changing oceanic
conditions.</p>
      <p>Numerous laboratory studies indicate that acidification of oceanic waters
leads to a decrease in calcification rates for coccolithophores
<xref ref-type="bibr" rid="bib1.bibx51 bib1.bibx59 bib1.bibx22" id="paren.9"/>. However, some recent
studies show that coccolithophores increase calcification in response to
increasing <inline-formula><mml:math display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> or restore calcification rates after an adaptation
period under increasing <inline-formula><mml:math display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and warming
<xref ref-type="bibr" rid="bib1.bibx34 bib1.bibx58" id="paren.10"><named-content content-type="pre">e.g.,</named-content></xref>. Indeed, responses to
elevated <inline-formula><mml:math display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> by different species of coccolithophores vary in all
directions, making the extrapolation of these laboratory results to natural
populations challenging. How calcifying phytoplankton will react to
continually increasing <inline-formula><mml:math display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> may vary from region to region in the
world's oceans, depending on phytoplankton assemblages (e.g., the dominant
species or strain of coccolithophore), available nutrients, and temperature
<xref ref-type="bibr" rid="bib1.bibx60" id="paren.11"/>. Coccolithophore responses to ocean acidification may be
species specific or even vary within species <xref ref-type="bibr" rid="bib1.bibx13" id="paren.12"><named-content content-type="pre">different
<italic>morphotype</italic> responses, see</named-content></xref>.</p>
      <p>Differences in physiological mechanisms could play an important role in
determining relative phytoplankton abundances under increasing DIC and
acidification. For instance, nutrient uptake rates vary between phytoplankton
species depending on the affinity of the transport mechanism for its
substrate (e.g., phosphate ion). Laboratory experiments on the widespread
coccolithophore <italic>Emiliania huxleyi</italic> have shown this species to have an
efficient phosphate uptake system with a low half-saturation constant for
phosphate, making it a superior competitor in phosphate-limited oceanic
regions <xref ref-type="bibr" rid="bib1.bibx53" id="paren.13"/>. These results have been supported by field
data from the subtropical Pacific Ocean <xref ref-type="bibr" rid="bib1.bibx20" id="paren.14"/> and through a
combination of field data and modeling in the northeast Atlantic Ocean
<xref ref-type="bibr" rid="bib1.bibx64" id="paren.15"/>. For inorganic carbon uptake for photosynthesis,
however, <italic>E. huxleyi</italic> displays a relatively high half-saturation
constant compared to other phytoplankton <xref ref-type="bibr" rid="bib1.bibx50 bib1.bibx55" id="paren.16"/>,
indicating that coccolithophores may benefit from increasing atmospheric
<inline-formula><mml:math display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> absorbed into the ocean. However, there are few in situ or
observational studies of coccolithophore responses to increasing
anthropogenic carbon <xref ref-type="bibr" rid="bib1.bibx24 bib1.bibx25" id="paren.17"><named-content content-type="pre">e.g.,</named-content></xref>.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F1" specific-use="star"><caption><p>Horizontal <bold>(a)</bold> and vertical <bold>(b)</bold> distribution of
pigment measurements taken at BATS (black dots) overlaid on a contour plot of
HPLC-measured Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> at BATS. The red box
in <bold>(a)</bold> shows the PIC grid cell containing the most BATS measurements
(PIC data shown in Fig. <xref ref-type="fig" rid="Ch1.F8"/>), while the black box
in <bold>(b)</bold> shows the upper 30 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">m</mml:mi></mml:math></inline-formula> of measurements used for
PIC-Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> correlations and correlations presented in
Fig. <xref ref-type="fig" rid="Ch1.F3"/>.</p></caption>
        <?xmltex \igopts{width=355.659449pt}?><graphic xlink:href="https://bg.copernicus.org/articles/13/1163/2016/bg-13-1163-2016-f01.pdf"/>

      </fig>

      <p>To test the hypothesis that coccolithophores may be responding positively to
additional <inline-formula><mml:math display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> inputs, we employed data from the Bermuda Atlantic
Time-series Study (BATS), a long-running oceanic time series in the North
Atlantic subtropical gyre (Sargasso Sea) located at approximately
31.7<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N, 64.2<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> W (Fig. <xref ref-type="fig" rid="Ch1.F1"/>). At this site,
twice-monthly and monthly hydrographic and biogeochemical measurements have
been made since the late 1980s
<xref ref-type="bibr" rid="bib1.bibx40 bib1.bibx12" id="paren.18"><named-content content-type="pre">Fig. <xref ref-type="fig" rid="Ch1.F1"/>;</named-content></xref>. The BATS environment
is characterized by Ekman downwelling and convergence, which results in an
oligotrophic setting <xref ref-type="bibr" rid="bib1.bibx57" id="paren.19"/>. While this area displays
strong summer stratification (mixed-layer depth <inline-formula><mml:math display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn>35</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula>),
seasonal overturning results in a deep mixing of the water column during
winter <xref ref-type="bibr" rid="bib1.bibx62 bib1.bibx38" id="paren.20"><named-content content-type="pre">mixed-layer depth <inline-formula><mml:math display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn>250</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula>;</named-content></xref>. Though oligotrophic oceanic
gyres have relatively low productivity compared to other areas of the oceans,
they cover vast areas and thus are important on a global scale
<xref ref-type="bibr" rid="bib1.bibx57" id="paren.21"/>. Furthermore, the strong summer stratification
experienced in these regions could be indicative of future trends, as
increased stratification of the water column is projected with global warming
<xref ref-type="bibr" rid="bib1.bibx30 bib1.bibx27 bib1.bibx17" id="paren.22"/>. Thus, understanding
phytoplankton dynamics subject to these environmental conditions is essential
for accurately forecasting future ocean biogeochemistry.</p>
      <p>Pigment analyses have been used to study the distribution, relative
abundance, and assemblages of natural phytoplankton populations. Using high
performance liquid chromatography (HPLC) to identify the presence and
concentration of signature pigments, researchers can obtain relative
components of chlorophyll <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> (Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>) from phytoplankton
<xref ref-type="bibr" rid="bib1.bibx36 bib1.bibx68 bib1.bibx65" id="paren.23"/>. Coccolithophores, a haptophyte
algae, are identified using signature pigments for haptophytes (mainly
19<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>′</mml:mo></mml:msup></mml:math></inline-formula>-hexanoyloxyfucoxanthin), of which coccolithophores are likely the main
component <xref ref-type="bibr" rid="bib1.bibx21" id="paren.24"/>, particularly at BATS <xref ref-type="bibr" rid="bib1.bibx31 bib1.bibx62 bib1.bibx39" id="paren.25"><named-content content-type="pre">see
Sect. 2;</named-content></xref>. While HPLC pigment
analyses can provide a site-specific record of phytoplankton relative
abundance, satellite-based records can provide information at larger spatial
scales.</p>
      <p>Ocean color remote sensing, through the Sea-viewing Wide Field-of-view Sensor
(SeaWiFS; 1997–2010) and the Moderate Resolution Imaging Spectroradiometer
(MODIS) Aqua (2002–present) platforms, has revolutionized our understanding
of the ecological processes of the upper ocean on a variety of spatial and
temporal scales. Satellite-estimated Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration has been used as
a proxy for phytoplankton abundance and biomass since 1978. While most
phytoplankton are not very effective light scatterers relative to their
surroundings, coccolithophores produce CaCO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> shells that are highly
reflective. An understanding of coccolithophore-specific water-leaving
radiances and the calcite-specific backscattering cross section allows for
the concentration of coccolithophore particulate inorganic carbon (PIC) to be
estimated via remote sensing <xref ref-type="bibr" rid="bib1.bibx28 bib1.bibx8 bib1.bibx9" id="paren.26"/>.
Therefore, satellite estimates of PIC provide a qualitative proxy for
coccolithophore abundance.</p>
      <p>In this study, we combine pigment data from BATS along with PIC and Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>
measurements from the satellite record to assess recent trends in
phytoplankton dynamics in the North Atlantic subtropical gyre, with a focus
on coccolithophores. This data suggest that coccolithophore populations in
the North Atlantic are increasing. Correlations indicate that they may be
responding positively to increasing inorganic carbon from anthropogenic
inputs in the upper mixed layer.</p>
</sec>
<sec id="Ch1.S2">
  <title>Methods</title>
<sec id="Ch1.S2.SS1">
  <title>Data sources</title>
      <p>Pigment measurements were obtained from the website of BATS
(<uri>http://bats.bios.edu</uri>), resampled at regular monthly intervals using
a linear interpolation between measurements, and converted to relative
Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> components from different phytoplankton groups as in
<xref ref-type="bibr" rid="bib1.bibx36" id="text.27"/>. Briefly, each phytoplankton group is associated with
signature pigments that have relatively constant ratios with total Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>.
Signature pigment concentrations from each phytoplankton group, obtained via
HPLC analysis, were converted to Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration using these ratios.
This method has been verified in the North Pacific <xref ref-type="bibr" rid="bib1.bibx36" id="paren.28"/>
and the North Atlantic subtropical gyres <xref ref-type="bibr" rid="bib1.bibx2" id="paren.29"/>. We focused
on measurements from the upper water column (top 30 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">m</mml:mi></mml:math></inline-formula>), consistently
within the mixed layer <xref ref-type="bibr" rid="bib1.bibx62 bib1.bibx38" id="paren.30"/>, but also examined
trends and variability integrated over the depth of the euphotic zone
(<inline-formula><mml:math display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 140 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">m</mml:mi></mml:math></inline-formula>) to verify congruence with the top 30 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">m</mml:mi></mml:math></inline-formula> of the
water column.</p>
      <p>Haptophyte pigments specifically were calculated using
19<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>′</mml:mo></mml:msup></mml:math></inline-formula>-hexanoyloxyfucoxanthin (19<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>′</mml:mo></mml:msup></mml:math></inline-formula>-hex) pigments and
19<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>′</mml:mo></mml:msup></mml:math></inline-formula>-butanoyloxyfucoxanthin (19<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>′</mml:mo></mml:msup></mml:math></inline-formula>-but). Coccolithophores and other
prymnesiophytes contain 19<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>′</mml:mo></mml:msup></mml:math></inline-formula>-hex and negligible amounts of 19<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>′</mml:mo></mml:msup></mml:math></inline-formula>-but, while
some other phytoplankton (e.g., chrysophytes and <italic>Phaeocystis</italic>)
contain significant amounts of both 19<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>′</mml:mo></mml:msup></mml:math></inline-formula>-hex and 19<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>′</mml:mo></mml:msup></mml:math></inline-formula>-but
<xref ref-type="bibr" rid="bib1.bibx69 bib1.bibx36" id="paren.31"/>. Based on the relative concentrations of
19<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>′</mml:mo></mml:msup></mml:math></inline-formula>-but to 19<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>′</mml:mo></mml:msup></mml:math></inline-formula>-hex measured at BATS, we subtracted out the phytoplankton
pigment contribution that contains both 19<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>′</mml:mo></mml:msup></mml:math></inline-formula>-hex and 19<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>′</mml:mo></mml:msup></mml:math></inline-formula>-but, as in
<xref ref-type="bibr" rid="bib1.bibx36" id="text.32"/>, and multiply the remaining 19<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>′</mml:mo></mml:msup></mml:math></inline-formula>-hex concentration by a
19<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>′</mml:mo></mml:msup></mml:math></inline-formula>-hex to Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> ratio found in calcifying haptophytes
<xref ref-type="bibr" rid="bib1.bibx36" id="paren.33"/>. The result is the haptophyte chlorophyll <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>
fraction, which in this study, we assume to be mainly from coccolithophores.
Particularly at BATS, the dominant haptophyte group has been reported to be
coccolithophores by, e.g., <xref ref-type="bibr" rid="bib1.bibx39" id="text.34"/> and <xref ref-type="bibr" rid="bib1.bibx62" id="text.35"/>, but
these references offer no direct evidence for this assumption. We did,
however, find a significant correlation (<inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mo>&lt;</mml:mo></mml:math></inline-formula> 0.0000001,
<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>r</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0.69) between coccolithophore cell counts published in
<xref ref-type="bibr" rid="bib1.bibx31" id="text.36"/> and calculated Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> from haptophytes at BATS
(Fig. S1 in the Supplement). More generally, <xref ref-type="bibr" rid="bib1.bibx21" id="text.37"/> reported that
coccolithophores often dominate the haptophyte community in open-ocean
environments, such as BATS.</p>
      <p>In order to explore whether phytoplankton population dynamics are driven by
carbonate chemistry parameters, we used the Mocsy Fortran 90 package
<xref ref-type="bibr" rid="bib1.bibx45" id="paren.38"/> to solve the full carbonate chemistry system using
available measurements at BATS <xref ref-type="bibr" rid="bib1.bibx11" id="paren.39"/>. Using dissociation
constants from <xref ref-type="bibr" rid="bib1.bibx41" id="text.40"/>, carbonate chemistry output from Mocsy
agrees with other current carbonate system packages available
<xref ref-type="bibr" rid="bib1.bibx46" id="paren.41"/>. Input includes average concentrations of total alkalinity
and DIC along with mean temperature and salinity in the top 30 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">m</mml:mi></mml:math></inline-formula>.
Output includes <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mtext>pH</mml:mtext><mml:mi>T</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mtext>CO</mml:mtext><mml:mn mathvariant="normal">3</mml:mn><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mo>-</mml:mo></mml:mrow></mml:msubsup></mml:mrow></mml:math></inline-formula> concentration,
bicarbonate (<inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mtext>HCO</mml:mtext><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>) concentration, and aqueous <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mtext>CO</mml:mtext><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>+</mml:mo><mml:mtext>carbonic acid</mml:mtext><mml:mspace linebreak="nobreak" width="0.25em"/><mml:mo>(</mml:mo><mml:msub><mml:mtext>CO</mml:mtext><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mo>(</mml:mo><mml:mtext>aq</mml:mtext><mml:mo>)</mml:mo></mml:mrow></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:msub><mml:mtext>CO</mml:mtext><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:mo>=</mml:mo><mml:msub><mml:mi mathvariant="normal">H</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:msubsup><mml:mtext>CO</mml:mtext><mml:mn mathvariant="normal">3</mml:mn><mml:mo>*</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>).</p>
      <p>We used satellite observations of level 3, monthly binned PIC and Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>
from the SeaWiFS (1997–2007; limited
data availability after 2007) and MODIS Aqua (2003–2014) on a 9 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">km</mml:mi></mml:math></inline-formula>
(5 min) grid obtained from the NASA Ocean Color distributed archive
(<uri>http://oceancolor.gsfc.nasa.gov/</uri>). We calculated the mean
satellite-derived PIC concentration in the BATS region that
contains <inline-formula><mml:math display="inline"><mml:mo>&gt;</mml:mo></mml:math></inline-formula> 95 % of pigment measurements (Fig. <xref ref-type="fig" rid="Ch1.F1"/>a).</p>
</sec>
<sec id="Ch1.S2.SS2">
  <title>Statistical analyses</title>
<sec id="Ch1.S2.SS2.SSS1">
  <title>Correlations</title>
      <p>In order to identify correlations of phytoplankton pigment abundance across
different species, with local environmental variables, and with satellite
products, we performed correlation analysis on linearly detrended and
deseasonalized (1-year boxcar smoothing) anomalies. Correlations between the
main Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> phytoplankton fractions present at BATS
(<italic>Prochlorococcus</italic>, <italic>Synechococcus</italic>, haptophytes, and diatoms)
were calculated for a variety of oceanic measurements hypothesized to
influence phytoplankton abundance: DIC, alkalinity, inorganic nitrogen
concentrations, temperature, salinity, and carbonate chemistry variables (see
above section on carbonate chemistry). We also explored possible correlations
between Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> phytoplankton fractions and the mixed-layer depth (MLD). We
used two methods for calculating MLD. <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mtext>MLD</mml:mtext><mml:mtext>sigma</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> was
determined to be where the potential density anomalies (sigma-theta) at depth
displayed a <inline-formula><mml:math display="inline"><mml:mrow><mml:mo>&gt;</mml:mo><mml:mn>0.125</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="normal">kg</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> difference from surface waters,
while <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mtext>MLD</mml:mtext><mml:mtext>temp</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> was calculated as the location of
0.5 <inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C change in temperature from the surface
<xref ref-type="bibr" rid="bib1.bibx43" id="paren.42"/>. Mean density and temperature measurements within the
top 10 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">m</mml:mi></mml:math></inline-formula> of the water column were used for <italic>surface</italic> values. We
also tested correlations with the monthly mean North Atlantic Oscillation
(NAO) index, obtained from NOAA National Weather Service Climate Prediction
Center (<uri>http://www.cpc.ncep.noaa.gov/data/teledoc/nao.shtml</uri>).</p>
</sec>
<sec id="Ch1.S2.SS2.SSS2">
  <title>Trends</title>
      <p>In order to quantify temporal trends in pigment concentrations,
biogeochemical measurements, and satellite data, we calculated the slope of
a straight line that best fit the time series in a least-squares sense. When
comparing trends in pigments with trends in biogeochemical measurements at
BATS, we used the average values over the top 30 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">m</mml:mi></mml:math></inline-formula> of the water
column. Satellite Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> and PIC trend analysis was performed on a grid cell
basis.</p>
</sec>
</sec>
</sec>
<sec id="Ch1.S3">
  <title>Results</title>
<sec id="Ch1.S3.SS1">
  <?xmltex \opttitle{Chl~$a_{{\text{hapto}}}$ at BATS}?><title>Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> at BATS</title>
      <p>Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> from haptophytes (Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>; assumed to be primarily
from cocccolithophores; see Sect. 2) is present
throughout the euphotic zone at BATS and displays a pronounced seasonal
cycle. Concentrations of Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> surpassed
100 <inline-formula><mml:math display="inline"><mml:mrow><mml:mi mathvariant="normal">µ</mml:mi><mml:mi mathvariant="normal">g</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> during periods of high abundance, with
<inline-formula><mml:math display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn>35</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mrow><mml:mi mathvariant="normal">µ</mml:mi><mml:mi mathvariant="normal">g</mml:mi></mml:mrow></mml:math></inline-formula> Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> during
periods of relatively low abundance, such as between 2000 and 2004
(Fig. <xref ref-type="fig" rid="Ch1.F1"/>b). The bulk of haptophyte pigments occurred around <inline-formula><mml:math display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn>80</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">m</mml:mi></mml:math></inline-formula> of depth, but pigments were also abundant in the upper
30 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">m</mml:mi></mml:math></inline-formula>, especially during spring. Haptophyte pigment concentration is
low below depths of <inline-formula><mml:math display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn>140</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">m</mml:mi></mml:math></inline-formula>. During the mid-90s and last 6
years of the data set, Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> was more concentrated,
especially in the upper 30 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">m</mml:mi></mml:math></inline-formula> of the water column
(Fig. <xref ref-type="fig" rid="Ch1.F1"/>b).</p>
      <p>Haptophytes comprise roughly 30 % of the Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> in the upper
30 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">m</mml:mi></mml:math></inline-formula> of the water column at BATS (Fig. <xref ref-type="fig" rid="Ch1.F2"/>),
a percentage that persists from the start of measurements (<inline-formula><mml:math display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn>1990</mml:mn></mml:mrow></mml:math></inline-formula>) to
the end of our data set (<inline-formula><mml:math display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn>2012</mml:mn></mml:mrow></mml:math></inline-formula>). However, a period of low haptophyte
abundance occurred between 2000 and 2004, reducing their relative
contribution to Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> to 15 %. <italic>Synechococcus</italic> Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> is
variable, ranging from 20 to 70 % of the total Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> in the upper
30 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">m</mml:mi></mml:math></inline-formula>. Unfortunately, signature pigment concentrations necessary to
calculate <italic>Synechococcus</italic> Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> were missing from the BATS data set
at the beginning of our time series as well as during a 5-year segment
from <inline-formula><mml:math display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn>1997</mml:mn></mml:mrow></mml:math></inline-formula> to <inline-formula><mml:math display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn>2002</mml:mn></mml:mrow></mml:math></inline-formula> (shown as hatched area in
Fig. <xref ref-type="fig" rid="Ch1.F2"/>). In contrast to generally high
<italic>Synechococcus</italic> and haptophyte pigment abundance,
<italic>Prochlorococcus</italic> and diatom pigments contribute relatively small
fractions to the total Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> in the upper 30 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">m</mml:mi></mml:math></inline-formula>. Correlations with
potentially influential oceanographic drivers can aid in explaining variable
abundance of different phytoplankton Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> fractions in these surface
waters.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F2"><caption><p>Percent of Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> from main phytoplankton groups at BATS from 1992
to 2012 in the top 30 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">m</mml:mi></mml:math></inline-formula> of the water column derived from signature
pigment and Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>total</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> concentrations, deseasonalized with
a 1-year boxcar filter (purple is diatoms,
blue is <italic>Prochlorococcus</italic>, red is haptophytes,
green is <italic>Synechococcus</italic>, yellow is other phytoplankton).
Hatched area indicates missing pigment data for <italic>Synechococcus</italic>.</p></caption>
          <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://bg.copernicus.org/articles/13/1163/2016/bg-13-1163-2016-f02.pdf"/>

        </fig>

</sec>
<sec id="Ch1.S3.SS2">
  <?xmltex \opttitle{Correlations of Chl~$a$ components with oceanographic measurements at BATS}?><title>Correlations of Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> components with oceanographic measurements at BATS</title>
      <p>Correlation coefficients between detrended, deseasonalized anomalies of
Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>, Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> from <italic>Synechococcus</italic>
(Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>syn</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>), Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> from <italic>Prochlorococcus</italic>
(Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>pro</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>), and Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> from diatoms (Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>diatoms</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>)
and anomalies in other oceanographic measurements/indices are presented in
Fig. <xref ref-type="fig" rid="Ch1.F3"/>. Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> shows strong positive
correlations with DIC and <inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mtext>HCO</mml:mtext><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> (explaining nearly 20 % of the
variability). Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>pro</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> showed similar, but somewhat weaker,
correlations with DIC and <inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mtext>HCO</mml:mtext><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>. Conversely, Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>syn</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>
displayed a strong negative correlation with DIC and <inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mtext>HCO</mml:mtext><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>
(Fig. <xref ref-type="fig" rid="Ch1.F3"/>). All phytoplankton pigment groups, except
<italic>Synechococcus</italic>, were positively correlated with nitrate (NO<inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mi/><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>)
variability (measurements also include nitrite, <inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mtext>NO</mml:mtext><mml:mn mathvariant="normal">2</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>;
<inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mtext>NO</mml:mtext><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup><mml:mo>+</mml:mo><mml:msubsup><mml:mtext>NO</mml:mtext><mml:mn mathvariant="normal">2</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> is referred to hereinafter as
<inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mtext>NO</mml:mtext><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>). <inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mtext>CO</mml:mtext><mml:mn mathvariant="normal">3</mml:mn><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mo>-</mml:mo></mml:mrow></mml:msubsup></mml:mrow></mml:math></inline-formula> concentration, the saturation state of
aragonite (<inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Ω</mml:mi><mml:mtext>arag</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>), and temperature were negatively
correlated with Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>, opposite to Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>syn</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>.
Indeed, <italic>Synechococcus</italic> and haptophyte pigments display inverse
correlations for nearly every variable tested, including temperature
(Fig. <xref ref-type="fig" rid="Ch1.F3"/>).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F3"><caption><p>Correlation coefficients between Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> components and various
oceanographic measurements made in the upper 30 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">m</mml:mi></mml:math></inline-formula> of the water column
at BATS, NAO index, calculated mixed-layer depth (MLD; see Sect. 2) and
derived carbonate chemistry parameters. Stars indicate the absolute value of
the correlation coefficient is greater than 0.4.</p></caption>
          <?xmltex \igopts{width=213.395669pt}?><graphic xlink:href="https://bg.copernicus.org/articles/13/1163/2016/bg-13-1163-2016-f03.pdf"/>

        </fig>

      <p>Temperature is negatively correlated with Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> (as well as
Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>pro</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> and Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>diatoms</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>) and positively correlated
with Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>syn</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> (Fig. <xref ref-type="fig" rid="Ch1.F3"/>). Furthermore, when the
NAO index is in a positive phase, temperatures over this region of the North
Atlantic are generally warmer <xref ref-type="bibr" rid="bib1.bibx66" id="paren.43"/>. Therefore, in line with
the temperature correlations, the NAO index is negatively correlated with
Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>, opposite again to Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>syn</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>. MLD, an
indicator of both temperature and nutrient availability, shows corresponding
correlations with Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> components. When the MLD is deeper, there is more
Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> and less Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>syn</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>. Both methods of
calculating MLD (MLD<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mtext>temp</mml:mtext></mml:msub></mml:math></inline-formula> and <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mtext>MLD</mml:mtext><mml:mtext>sigma</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>) showed
similar correlations (Fig. <xref ref-type="fig" rid="Ch1.F3"/>).</p>
</sec>
<sec id="Ch1.S3.SS3">
  <?xmltex \opttitle{Fluctuations in chlorophyll~$a$ from different phytoplankton groups}?><title>Fluctuations in chlorophyll <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> from different phytoplankton groups</title>
      <p>Haptophyte and <italic>Synechococcus</italic> pigments generally show opposing
correlations with the variables tested (Fig. <xref ref-type="fig" rid="Ch1.F3"/>). This is
supported by the opposing dominance of either <italic>Synechococus</italic> or
haptophyte Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> throughout the time series (Fig. <xref ref-type="fig" rid="Ch1.F4"/>).
Indeed Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> and Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>syn</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> show a significant
negative correlation (<inline-formula><mml:math display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>&lt;</mml:mo><mml:mn>0.00001</mml:mn></mml:mrow></mml:math></inline-formula>). During periods of low haptophyte
pigment abundance (e.g., 2000–2004), <italic>Synechococcus</italic> pigments
dominate the water column. Later in the time series, however,
<italic>Synechococcus</italic> pigments decline and haptophyte pigments increase.
<italic>Prochlorococcus</italic> pigments (mostly low-light <italic>Prochlorococcus</italic>;
see Discussion) at BATS reside mostly in the deep chlorophyll maximum at
<inline-formula><mml:math display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn>100</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">m</mml:mi></mml:math></inline-formula> of depth and are a relatively minor component of the
Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> in the upper 30 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">m</mml:mi></mml:math></inline-formula> of the euphotic zone. Diatom presence,
usually associated with cold, high nutrient environments, is sporadic and
generally low in this oligotrophic oceanic region of the subtropical North
Atlantic, according to their signature pigments
(Fig. <xref ref-type="fig" rid="Ch1.F4"/>).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F4"><caption><p>Temporal evolution of the vertically resolved Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration
from the main phytoplankton present at BATS derived from signature pigments
from 1990 to 2012: <bold>(a)</bold> Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>,
<bold>(b)</bold> Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>syn</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>, <bold>(c)</bold> Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>pro</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>, and
<bold>(d)</bold> Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>diatoms</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>.</p></caption>
          <?xmltex \igopts{width=170.716535pt}?><graphic xlink:href="https://bg.copernicus.org/articles/13/1163/2016/bg-13-1163-2016-f04.pdf"/>

        </fig>

      <p>In general, pigment analyses indicate that <italic>Synechococcus</italic> and
haptophytes are the most abundant phytoplankton groups at BATS
(Figs. <xref ref-type="fig" rid="Ch1.F2"/> and <xref ref-type="fig" rid="Ch1.F4"/>). However, the
category classified as <italic>other</italic> (includes chrysophytes,
dinoflagellates, and
prasinophytes, among others) in Fig. <xref ref-type="fig" rid="Ch1.F3"/> comprises a large
portion (<inline-formula><mml:math display="inline"><mml:mo>&gt;</mml:mo></mml:math></inline-formula> 30 %) of the phytoplankton biomass during certain periods,
indicating certain conditions may favor neither <italic>Synechoccocus</italic> nor
haptophytes. The opposing correlations <italic>Synechoccocus</italic> and haptophyte
pigments exhibit with DIC, <inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mtext>HCO</mml:mtext><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mtext>CO</mml:mtext><mml:mn mathvariant="normal">3</mml:mn><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mo>-</mml:mo></mml:mrow></mml:msubsup></mml:mrow></mml:math></inline-formula>,
<inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mtext>NO</mml:mtext><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> and temperature could lead to interesting trends in
phytoplankton abundance in an ocean increasingly influenced by anthropogenic
climate change.</p>
</sec>
<sec id="Ch1.S3.SS4">
  <?xmltex \opttitle{Trends in Chl~$a_{{\text{hapto}}}$ and total Chl~$a$ at BATS}?><title>Trends in Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> and total Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> at BATS</title>
      <p>A time series of Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> at BATS shows that haptophytes
(mainly coccolithophores; see Sect. 2) have been increasing significantly
since 1990 (<inline-formula><mml:math display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>&lt;</mml:mo><mml:mn>0.01</mml:mn></mml:mrow></mml:math></inline-formula> for 30 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">m</mml:mi></mml:math></inline-formula> integral; <inline-formula><mml:math display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>&lt;</mml:mo><mml:mn>0.001</mml:mn></mml:mrow></mml:math></inline-formula> for
140 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">m</mml:mi></mml:math></inline-formula> integral; Fig. <xref ref-type="fig" rid="Ch1.F5"/>a, b). Mean concentration of
Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> in the upper 30 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">m</mml:mi></mml:math></inline-formula> of the water column has
increased by 0.848 <inline-formula><mml:math display="inline"><mml:mrow><mml:mi mathvariant="normal">µ</mml:mi><mml:mi mathvariant="normal">g</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">yr</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> (standard
error <inline-formula><mml:math display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0.332), corresponding to a 68 % increase over the course of
the BATS time series (1991–2012; an overall increase of
17.8 <inline-formula><mml:math display="inline"><mml:mrow><mml:mi mathvariant="normal">µ</mml:mi><mml:mi mathvariant="normal">g</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>), while the 140 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">m</mml:mi></mml:math></inline-formula> integral of
Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> has increased by 0.103 <inline-formula><mml:math display="inline"><mml:mrow><mml:mi mathvariant="normal">mg</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">yr</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>
(standard error <inline-formula><mml:math display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0.0307) corresponding to a 37 % increase (an
overall increase of 2.2 <inline-formula><mml:math display="inline"><mml:mrow><mml:mi mathvariant="normal">mg</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>). We assess the sensitivity of
these trends to interannual variability by performing trend calculations for
a range of start and end years over the time series. The resulting trend
pattern shown in Fig. <xref ref-type="fig" rid="Ch1.F7"/>a shows mostly positive trends in
Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>, except for end years in the 2000–2004 period. Total
chlorophyll <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> (Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>total</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>) also shows a significant positive
trend over the time series (<inline-formula><mml:math display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>&lt;</mml:mo><mml:mn>0.05</mml:mn></mml:mrow></mml:math></inline-formula> for 30 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">m</mml:mi></mml:math></inline-formula> integral; <inline-formula><mml:math display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>&lt;</mml:mo><mml:mn>0.001</mml:mn></mml:mrow></mml:math></inline-formula>
for 140 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">m</mml:mi></mml:math></inline-formula> integral; Fig. <xref ref-type="fig" rid="Ch1.F6"/>; upper right corner
of Fig. <xref ref-type="fig" rid="Ch1.F7"/>c). Figure <xref ref-type="fig" rid="Ch1.F7"/>c shows trends in
Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>total</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> for a range of start and end years, displaying
a different pattern than that of the trends in the Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>
component of Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>. For instance, for end years in the 2000–2004 period,
Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>total</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> shows positive trends (but nonsignificant), whereas
Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> shows significant negative trends
(Fig. <xref ref-type="fig" rid="Ch1.F7"/>). Mean Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> in the upper 30 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">m</mml:mi></mml:math></inline-formula> primarily
exhibits negative trends in the later part of the time series and most trends
in Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> are nonsignificant (Fig. <xref ref-type="fig" rid="Ch1.F7"/>c). Unfortunately,
missing <italic>Synechococcus</italic> pigment data did not allow for long-term trend
analysis of this group of phytoplankton (see hatched area in
Fig. <xref ref-type="fig" rid="Ch1.F2"/> and white area in Fig. <xref ref-type="fig" rid="Ch1.F4"/>).</p>
      <p>In line with the results of our correlation analysis, the trends in
<inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mtext>HCO</mml:mtext><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> for various start and end years show a similar pattern to
the trends in Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> (Fig. <xref ref-type="fig" rid="Ch1.F7"/>b): mostly
positive trends with slightly negative (but nonsignificant) trends in
<inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mtext>HCO</mml:mtext><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> concentration for end year in the 2000–2004 period, a low
point in haptophyte pigments. Conversely, the trend pattern for the
substrate-inhibitor ratio, <inline-formula><mml:math display="inline"><mml:mrow><mml:mo>[</mml:mo><mml:msubsup><mml:mtext>HCO</mml:mtext><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mrow><mml:mo>[</mml:mo><mml:msup><mml:mi mathvariant="normal">H</mml:mi><mml:mo>+</mml:mo></mml:msup><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula>, is distinctly
different from that of Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>, exhibiting all negative trends
(Fig. <xref ref-type="fig" rid="Ch1.F7"/>d). Trends in Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>, assumed here
to be mainly representative of coccolithophores (see Sect. 2), can be further corroborated with PIC measurements from the satellite record.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F5"><caption><p>Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> measured at BATS and satellite-derived PIC.
Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> integrated from 30 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">m</mml:mi></mml:math></inline-formula> is shown in <bold>(a)</bold>,
while Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> integrated from 140 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">m</mml:mi></mml:math></inline-formula> depth is shown
in <bold>(b)</bold>. PIC data shown in <bold>(c)</bold> were obtained from the 5 min
satellite grid cell with the most BATS measurements (see
Fig. <xref ref-type="fig" rid="Ch1.F1"/>). Bolder lines represent a 2-year Gaussian filter on the
data. We restricted the <inline-formula><mml:math display="inline"><mml:mi>y</mml:mi></mml:math></inline-formula> axes in panels <bold>(a)</bold> and <bold>(b)</bold> to
highlight the filtered data; see Fig. S3 to view all unfiltered data points.</p></caption>
          <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://bg.copernicus.org/articles/13/1163/2016/bg-13-1163-2016-f05.pdf"/>

        </fig>

</sec>
<sec id="Ch1.S3.SS5">
  <title>Relating BATS pigment data to satellite products</title>
      <p>Significant correlations were detected between Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>
(30 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">m</mml:mi></mml:math></inline-formula> integral) measured at BATS and PIC derived from each satellite.
The SeaWiFS-derived PIC correlated somewhat better with
Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> than MODIS-derived PIC (<?xmltex \hack{\mbox\bgroup}?>SeaWiFS<?xmltex \hack{\egroup}?>
PIC-Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>=</mml:mo><mml:mn>0.0075</mml:mn></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>r</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mn>0.19</mml:mn></mml:mrow></mml:math></inline-formula> vs. MODIS
PIC-Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>=</mml:mo><mml:mn>0.050</mml:mn></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>r</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mn>0.12</mml:mn></mml:mrow></mml:math></inline-formula>). This difference is
likely inherent in the different algorithms used to estimate PIC from each
satellite (see following paragraph). Nevertheless, these correlations
demonstrate correspondence between Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> measurements and
satellite PIC, both of which relate to relative coccolithophore abundance.</p>
      <p>Two radiance-based PIC algorithms can be used to relate water-leaving
radiance to calcite absorption and scattering properties: a two-band
algorithm <xref ref-type="bibr" rid="bib1.bibx8" id="paren.44"/> and a three-band algorithm
<xref ref-type="bibr" rid="bib1.bibx28" id="paren.45"/>. The North Atlantic subtropical gyre exhibits
relatively low PIC concentrations year-round. During the SeaWiFS–MODIS
overlap period (2003–2007), PIC estimated from the two satellites revealed
stark differences (Fig. <xref ref-type="fig" rid="Ch1.F5"/>c), possibly explained by the
differences in algorithm performance in this region (i.e., sensitivity to
low/background PIC concentrations). The low correspondence between the two
estimates of PIC prevented the generation of a single, merged PIC
time series. We therefore report trends in PIC separately over the respective
satellite eras (Fig. <xref ref-type="fig" rid="Ch1.F8"/>).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F6"><caption><p>Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>total</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> measured at BATS and satellite-derived
Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>. Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>total</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> integrated from 30 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">m</mml:mi></mml:math></inline-formula> is shown
in <bold>(a)</bold>, while Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>total</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> integrated from 140 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">m</mml:mi></mml:math></inline-formula>
depth is shown in <bold>(b)</bold>. Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> data shown in <bold>(c)</bold> were
obtained from the 5 min satellite grid cell with the most BATS measurements
(see Fig. <xref ref-type="fig" rid="Ch1.F1"/>). Bolder lines represent a 2-year Gaussian filter on
the data. We restricted the <inline-formula><mml:math display="inline"><mml:mi>y</mml:mi></mml:math></inline-formula> axes in panels <bold>(a)</bold> and <bold>(b)</bold>
to highlight the filtered data; see Fig. S4 to view all unfiltered data
points.</p></caption>
          <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://bg.copernicus.org/articles/13/1163/2016/bg-13-1163-2016-f06.pdf"/>

        </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F7" specific-use="star"><caption><p>Linear trends for a range of start and end years in <bold>(a)</bold>
Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>, <bold>(b)</bold> <inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mtext>HCO</mml:mtext><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>, <bold>(c)</bold> Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>,
and <bold>(d)</bold> ratio of <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mtext>HCO</mml:mtext><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> : <inline-formula><mml:math display="inline"><mml:mrow class="chem"><mml:msup><mml:mi mathvariant="normal">H</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula>. All trends are based
on mean concentrations measured at BATS in the upper 30 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">m</mml:mi></mml:math></inline-formula> of the
water column. Boxes with hatch lines demarcate nonsignificant trends. Stars
indicate absolute values of trends are greater than
0.2 <inline-formula><mml:math display="inline"><mml:mrow><mml:mi mathvariant="normal">µ</mml:mi><mml:mi mathvariant="normal">g</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">yr</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> for Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>,
0.003 <inline-formula><mml:math display="inline"><mml:mrow><mml:mi mathvariant="normal">mol</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">yr</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> for <inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mtext>HCO</mml:mtext><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>,
6 <inline-formula><mml:math display="inline"><mml:mrow><mml:mi mathvariant="normal">µ</mml:mi><mml:mi mathvariant="normal">g</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">yr</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> for Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>, and
0.002 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">mol</mml:mi></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>mol<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> yr<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> for <inline-formula><mml:math display="inline"><mml:mrow><mml:mo>[</mml:mo><mml:mrow class="chem"><mml:msubsup><mml:mi mathvariant="normal">HCO</mml:mi><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mrow><mml:mo>[</mml:mo><mml:mrow class="chem"><mml:msup><mml:mi mathvariant="normal">H</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula>.</p></caption>
          <?xmltex \igopts{width=369.885827pt}?><graphic xlink:href="https://bg.copernicus.org/articles/13/1163/2016/bg-13-1163-2016-f07.pdf"/>

        </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F8" specific-use="star"><caption><p>Trends in PIC concentration derived from satellite data
for <bold>(a, c)</bold> SeaWiFS (1998–2007), and <bold>(b, d)</bold> MODIS
(2003–2014). Bottom panels shows significant trends (<inline-formula><mml:math display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>&lt;</mml:mo><mml:mn>0.05</mml:mn></mml:mrow></mml:math></inline-formula>).</p></caption>
          <?xmltex \igopts{width=369.885827pt}?><graphic xlink:href="https://bg.copernicus.org/articles/13/1163/2016/bg-13-1163-2016-f08.pdf"/>

        </fig>

      <p>Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> measured at BATS (30 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">m</mml:mi></mml:math></inline-formula> integral) and Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> derived by
satellite were significantly correlated (<inline-formula><mml:math display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>&lt;</mml:mo><mml:mn>0.01</mml:mn></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>r</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mn>0.16</mml:mn></mml:mrow></mml:math></inline-formula>). In this
case, Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> measured by satellite displayed good correspondence between the
two satellite eras and could be merged into one time series. Following the
regression technique of <xref ref-type="bibr" rid="bib1.bibx16" id="text.46"/>, we generated one continuous
record of Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> from 1998 to 2014 by applying linear regression over the
2003–2007 SeaWiFS–MODIS overlap period to predict these variables from 2008
to 2014 (Fig. <xref ref-type="fig" rid="Ch1.F6"/>c).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F9"><caption><p>Trends in Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> concentration derived from merged satellite
records: SeaWiFS and MODIS (1998–2014). The bottom map <bold>(b)</bold> shows
significant trends (<inline-formula><mml:math display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>&lt;</mml:mo><mml:mn>0.05</mml:mn></mml:mrow></mml:math></inline-formula>).</p></caption>
          <?xmltex \igopts{width=199.169291pt}?><graphic xlink:href="https://bg.copernicus.org/articles/13/1163/2016/bg-13-1163-2016-f09.pdf"/>

        </fig>

</sec>
<sec id="Ch1.S3.SS6">
  <?xmltex \opttitle{Regional trends in satellite PIC and Chl~$a$}?><title>Regional trends in satellite PIC and Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula></title>
      <p>Linear trends in PIC derived from satellite observations are positive for
most of the North Atlantic subtropical gyre (Fig. <xref ref-type="fig" rid="Ch1.F8"/>). Nearly
all significant trends (<inline-formula><mml:math display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>&lt;</mml:mo><mml:mn>0.05</mml:mn></mml:mrow></mml:math></inline-formula>) in PIC concentration are positive,
especially during the MODIS era (Fig. <xref ref-type="fig" rid="Ch1.F8"/>c, d; 1998–2007 for
SeaWiFS and 2003–2014 for MODIS). However, unlike at the BATS site, Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>
does not appear to be increasing in most of the gyre
(Fig. <xref ref-type="fig" rid="Ch1.F9"/>). There are slight positive trends in Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> around
the BATS region (Fig. <xref ref-type="fig" rid="Ch1.F9"/>a), but these are not statistically
significant (Fig. <xref ref-type="fig" rid="Ch1.F9"/>b). Indeed, most of the North Atlantic
subtropical gyre shows a slight negative trend in Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> or no trend at all.
A trend of a subset of the satellite Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> from 1998 to 2012 shows
a slight, but nonsignificant, upward trend in Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> in the BATS region
(Fig. <xref ref-type="fig" rid="Ch1.F1"/>; 0.0009 <inline-formula><mml:math display="inline"><mml:mrow><mml:mi mathvariant="normal">mg</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">yr</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>&gt;</mml:mo><mml:mn>0.05</mml:mn></mml:mrow></mml:math></inline-formula>), just as the corresponding grid box for Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> at BATS in
Fig. <xref ref-type="fig" rid="Ch1.F7"/>.</p>
</sec>
</sec>
<sec id="Ch1.S4">
  <title>Discussion</title>
<sec id="Ch1.S4.SS1">
  <title>Phytoplankton dynamics at BATS</title>
      <p>In this study, we observed that coccolithophore populations, based on pigment
data for haptophytes, are increasing at BATS and are positively correlated
with DIC and <inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mtext>HCO</mml:mtext><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> (Figs. <xref ref-type="fig" rid="Ch1.F1"/>b, <xref ref-type="fig" rid="Ch1.F3"/>,
<xref ref-type="fig" rid="Ch1.F7"/>a). We observed opposite correlations for DIC and
<inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mtext>HCO</mml:mtext><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> with <italic>Synechococcus</italic>, the other major member of the
phytoplankton community at BATS. Some studies have suggested that
photosynthesis and growth of the coccolithophore, <italic>E. huxleyi</italic>, is
carbon limited and could possibly benefit from increasing <inline-formula><mml:math display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
<xref ref-type="bibr" rid="bib1.bibx50 bib1.bibx55 bib1.bibx5" id="paren.47"/>. Since
<inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mtext>CO</mml:mtext><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mo>(</mml:mo><mml:mtext>aq</mml:mtext><mml:mo>)</mml:mo></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mtext>HCO</mml:mtext><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> concentrations increase with
increasing DIC/ocean acidification, both photosynthesis and calcification
could be stimulated in coccolithophores, which primarily use <inline-formula><mml:math display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
for photosynthesis and <inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mtext>HCO</mml:mtext><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> for calcification
<xref ref-type="bibr" rid="bib1.bibx5" id="paren.48"/>. The results presented in this study support the
hypothesis that coccolithophores are responding positively to increasing
carbon availability, perhaps increasing their competitive ability in
oligotrophic settings such as BATS. However, a threshold <inline-formula><mml:math display="inline"><mml:mrow class="chem"><mml:msup><mml:mi mathvariant="normal">H</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> ion
concentration could be reached with further ocean acidification, eventually
constraining coccolithophore growth.</p>
      <p><italic>Synechococcus</italic>, on the other hand, was negatively correlated with
increasing carbon in the upper mixed layer and positively correlated with
temperature. In laboratory experiments, <italic>Synechococcus</italic> showed only
a slight, non-significant increase in growth rate under elevated
<inline-formula><mml:math display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> conditions, but increased growth 2.3-fold with increasing
<inline-formula><mml:math display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and temperature <xref ref-type="bibr" rid="bib1.bibx26" id="paren.49"/>. Sea surface temperature in
the upper 30 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">m</mml:mi></mml:math></inline-formula> at BATS has not increased significantly over the time
period of this study (0.04 <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup><mml:mi mathvariant="normal">C</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">yr</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> trend, <inline-formula><mml:math display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>=</mml:mo><mml:mn>0.22</mml:mn></mml:mrow></mml:math></inline-formula>).
However, positive temperature anomalies were recorded during the 2000–2004
period, a period of increased <italic>Synechococcus</italic> pigment abundance (and
low haptophyte pigment abundance). Conditions that could favor
<italic>Synechococcus</italic> may eventually arise with further warming, increasing
the competitive ability of <italic>Synechococcus</italic>.</p>
      <p>In order to examine redundancy in our correlations, we performed multiple
linear regressions between Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> and several of the driver
variables with which it showed the strongest correlations (not shown). When
DIC and <inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mtext>HCO</mml:mtext><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> were regressed together with Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>,
all the statistical power of DIC was removed, indicating that
<inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mtext>HCO</mml:mtext><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> is the primary driver of the two for Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>
variability. Furthermore, when temperature and <inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mtext>NO</mml:mtext><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> were regressed
together with Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>, the statistical effect of temperature
was removed. This indicates that temperature is not a controlling factor for
coccolithophore variability, but rather is a proxy for nutrient concentration
in relation to coccolithophore growth. A multiple linear regression of
Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> with both <inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mtext>HCO</mml:mtext><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mtext>NO</mml:mtext><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>
explained <inline-formula><mml:math display="inline"><mml:mo>&gt;</mml:mo></mml:math></inline-formula> 50 % of the variance in Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>r</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mn>0.52</mml:mn></mml:mrow></mml:math></inline-formula>). Other factors, such as competition or grazing, could perhaps account
for some of the remaining variability. Both <inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mtext>HCO</mml:mtext><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> and
<inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mtext>NO</mml:mtext><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> have increased significantly over this time period (<inline-formula><mml:math display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>&lt;</mml:mo><mml:mn>0.001</mml:mn></mml:mrow></mml:math></inline-formula>). However, <inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mtext>NO</mml:mtext><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> measurements are highly variable and near
zero, making their accuracy questionable, and the trend is only significant
if the last 2 years are included in the time series (Fig. S2). This is in
contrast to <inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mtext>HCO</mml:mtext><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>, which shows largely positive trends over this
time period matching quite well with those of Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>
(Fig. <xref ref-type="fig" rid="Ch1.F7"/>).</p>
      <p>The positive trend in <inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mtext>HCO</mml:mtext><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> concentration in the upper mixed layer
of the water column at BATS is most likely due to increasing absorption of
anthropogenic <inline-formula><mml:math display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> from the atmosphere. The upper 30 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">m</mml:mi></mml:math></inline-formula> of
the water column is particularly inundated with anthropogenic <inline-formula><mml:math display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
in the North Atlantic <xref ref-type="bibr" rid="bib1.bibx56 bib1.bibx11" id="paren.50"/>. From 1991 to 2012,
DIC concentration in the upper 30 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">m</mml:mi></mml:math></inline-formula> at BATS increased by a rate of
1.4 <inline-formula><mml:math display="inline"><mml:mrow><mml:mi mathvariant="normal">µ</mml:mi><mml:mi mathvariant="normal">mol</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">kg</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">yr</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>, which is roughly the expected rate of
increase given the rise in atmospheric <inline-formula><mml:math display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> <xref ref-type="bibr" rid="bib1.bibx57" id="paren.51"><named-content content-type="pre">see Chapter 10
in</named-content></xref>. Increasing inorganic carbon supply could also be
accompanied by warmer sea surface temperatures, increased stratification, and
decreased nutrient supply over the next century <xref ref-type="bibr" rid="bib1.bibx17" id="paren.52"/>.
Enriched coccolithophore growth by this additional carbon, as well as other
predicted oceanic changes with global warming, could lead to shifts in
phytoplankton community structure at BATS.</p>
      <p>Coccolithophores are not the only phytoplankton that may be responding
positively to additional inorganic carbon. <italic>Trichodesmium</italic>, the
filamentous <inline-formula><mml:math display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>-fixing cyanobacteria, has been shown to increase
growth and <inline-formula><mml:math display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">N</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> fixation under increasing <inline-formula><mml:math display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
<xref ref-type="bibr" rid="bib1.bibx33" id="paren.53"/>, yet other drivers, such as sea surface temperature,
nutrients, and species diversity, tend to exert more control on their growth
in situ <xref ref-type="bibr" rid="bib1.bibx61 bib1.bibx29" id="paren.54"/>. <italic>Trichodesmium</italic> has been
reported to be a common component of the phytoplankton assemblages in the
subtropical North Atlantic <xref ref-type="bibr" rid="bib1.bibx19 bib1.bibx1 bib1.bibx44" id="paren.55"/>, but was not specifically resolved in this study.
<italic>Trichodesmium</italic> contain a similar suite of pigments as
<italic>Synechococcus</italic> <xref ref-type="bibr" rid="bib1.bibx18 bib1.bibx2" id="paren.56"/>, and therefore
could be included in the Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>syn</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> fraction of our calculations.
This would aid to explain the negative correlation between
Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>syn</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mtext>NO</mml:mtext><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> (Fig. <xref ref-type="fig" rid="Ch1.F3"/>), and
further explain why Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>syn</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> is more abundant than
Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> in the upper water column during warmer, more
stratified periods.</p>
      <p>Whatever the exact components of Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>syn</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>, Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>
generally shows opposing abundance with this group. We hypothesize that when
the <italic>Synechococcus</italic> component (<inline-formula><mml:math display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 40 % of Chl <italic>a</italic> on
average at BATS) is abundant (perhaps due to a positive temperature anomaly),
photosynthesis accompanying an increase in <italic>Synechoccocus</italic> draws down
DIC (thus, <inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mtext>HCO</mml:mtext><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>). Low DIC could provoke carbon limitation of the
coccolithophore population <xref ref-type="bibr" rid="bib1.bibx50 bib1.bibx55" id="paren.57"/>, hindering
their competitive ability. Overall, however, the increase in DIC experienced
at BATS during the past 2 decades could lead to slightly increased growth
rates of coccolithophores <xref ref-type="bibr" rid="bib1.bibx50 bib1.bibx55" id="paren.58"/>, perhaps
bolstering their competitive ability within the phytoplankton community. If
coccolithophores are becoming more competitive at BATS due to a lessening of
carbon limitation, then they could continue to exert greater competitive
stress on <italic>Synechococcus</italic>, which appear to be competing with
coccolithophores for a similar niche. However, if the surface waters continue
to warm in this region of the Atlantic, as predicted <xref ref-type="bibr" rid="bib1.bibx17" id="paren.59"/>,
then <italic>Synechococcus</italic> could regain its competitive edge. Furthermore,
increasing <inline-formula><mml:math display="inline"><mml:mrow class="chem"><mml:msup><mml:mi mathvariant="normal">H</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> ion concentrations could eventually constrain
coccolithophore growth <xref ref-type="bibr" rid="bib1.bibx5 bib1.bibx6" id="paren.60"/>. Small changes in DIC,
nutrients, pH, or temperature could, in combination, influence which
phytoplankton group (<italic>Synechococcus</italic> or haptophytes) dominate at any
given time at BATS.</p>
      <p>The <italic>Prochlorococcus</italic> group, designated by Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>pro</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>, shows
similar correlations with oceanic driver variables as for
Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> (Fig. <xref ref-type="fig" rid="Ch1.F3"/>). <italic>Prochlorococcus</italic>
have been shown to lack a CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mo>(</mml:mo><mml:mtext>aq</mml:mtext><mml:mo>)</mml:mo></mml:mrow></mml:msub></mml:math></inline-formula> uptake mechanism and therefore
rely on <inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mtext>HCO</mml:mtext><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> uptake for photosynthesis <xref ref-type="bibr" rid="bib1.bibx7" id="paren.61"/>,
possibly explaining similar behavior to coccolithophores (also positively
correlated with <inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mtext>HCO</mml:mtext><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>), which use <inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mtext>HCO</mml:mtext><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> for
calcification. <italic>Prochlorococcus</italic> reside mainly in the deep chlorophyll
maximum, comprising a rather small portion of the Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> in the upper
30 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">m</mml:mi></mml:math></inline-formula> at BATS (Figs. <xref ref-type="fig" rid="Ch1.F2"/>,
<xref ref-type="fig" rid="Ch1.F4"/>). This could be, however, due to the relatively high
Chl <inline-formula><mml:math display="inline"><mml:mi>b</mml:mi></mml:math></inline-formula> to Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> ratio used in our pigment calculations
<xref ref-type="bibr" rid="bib1.bibx36" id="paren.62"/>, which is more representative of low-light
<italic>Prochlorococcus</italic> <xref ref-type="bibr" rid="bib1.bibx48" id="paren.63"/>. Yet, since <inline-formula><mml:math display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn>2005</mml:mn></mml:mrow></mml:math></inline-formula>,
Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>pro</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> has been more common in the upper 30 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">m</mml:mi></mml:math></inline-formula>,
resulting in an overall positive trend in Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>pro</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> over the
entire time series (<inline-formula><mml:math display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>&lt;</mml:mo><mml:mn>0.001</mml:mn></mml:mrow></mml:math></inline-formula>).</p>
      <p>Consistent with colder, high nutrient environments in which diatoms are
normally found, Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>diatoms</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> showed a strong positive correlation
with <inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mtext>NO</mml:mtext><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> and a negative correlation with temperature
(Fig. <xref ref-type="fig" rid="Ch1.F3"/>). If predicted trends in sea surface temperature
and nutrient supply with further stratification are realized, then diatoms
could become a reduced component of the phytoplankton assemblage at BATS
<xref ref-type="bibr" rid="bib1.bibx17" id="paren.64"/>. Combining fine-scale phytoplankton dynamics from BATS
with the satellite record can help to elucidate what changes are occurring
over large spatial scales.</p>
</sec>
<sec id="Ch1.S4.SS2">
  <?xmltex \opttitle{Trends Chl~$a$ and Chl~$a_{{\text{hapto}}}$ in the subtropical gyre}?><title>Trends Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> and Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> in the subtropical gyre</title>
      <p>Unlike at BATS, Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> in the North Atlantic subtropical gyre is not
increasing (Fig. <xref ref-type="fig" rid="Ch1.F9"/>). PIC, on the other hand, shows mainly
positive trends over the whole gyre, in agreement with data from BATS –
Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> shows overall increasing trends, despite some periods
of low abundance. Together with an absence of Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> trend, this implies
that coccolithophores are increasing in abundance relative to other types of
phytoplankton in the subtropical gyre. Accompanying this conclusion, however,
are uncertainties associated with the satellite-derived PIC estimates (see
Sect. 4.3 on Limitations of this Study). Even so, ratios relating
Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> to PIC can further elucidate confidence in
satellite-derived PIC estimates.</p>
      <p>Data on the amount of Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> per coccolithophore cell allows for the calculation
of cell concentration of coccolithophores in the surface waters at BATS.
Using a value of 0.26 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">pg</mml:mi></mml:math></inline-formula> Chl <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> per cell <xref ref-type="bibr" rid="bib1.bibx32" id="paren.65"/>, mean
coccolithophore cell concentration in the upper 30 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">m</mml:mi></mml:math></inline-formula> is <inline-formula><mml:math display="inline"><mml:mrow><mml:mn>143</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn>10</mml:mn><mml:mn mathvariant="normal">3</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mrow><mml:mi mathvariant="normal">cells</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">L</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> (corresponding to the mean value of
37.3 <inline-formula><mml:math display="inline"><mml:mrow><mml:mi mathvariant="normal">µ</mml:mi><mml:mi mathvariant="normal">g</mml:mi></mml:mrow></mml:math></inline-formula> Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> in the upper
30 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">m</mml:mi></mml:math></inline-formula>). Employing a ratio of PIC to coccolith of 0.26
<xref ref-type="bibr" rid="bib1.bibx10" id="paren.66"/> and considering 15 coccoliths per cell (a minimal
monolayer of coccoliths covering the cell) under nutrient replete conditions
and 100 coccoliths per cell under severe nutrient limitation
<xref ref-type="bibr" rid="bib1.bibx47" id="paren.67"/>, we arrive at a PIC concentration range of 0.56 to
3.73 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">mg</mml:mi></mml:math></inline-formula> PIC <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>. This range corresponds well to the
average satellite-derived PIC concentration in the BATS region
(Fig. <xref ref-type="fig" rid="Ch1.F1"/>a) over the study period: 2.71 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">mg</mml:mi></mml:math></inline-formula> PIC
<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> for SeaWiFS (standard deviation <inline-formula><mml:math display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0.50) and 2.66 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">mg</mml:mi></mml:math></inline-formula>
PIC <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> (standard deviation <inline-formula><mml:math display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0.39) for MODIS. The relatively
high satellite-derived PIC concentration further suggests that
coccolithophores may be experiencing nutrient limitation at BATS <xref ref-type="bibr" rid="bib1.bibx47" id="paren.68"><named-content content-type="pre">and
producing additional coccoliths in response;</named-content></xref>. Therefore,
even given the multiple sources of error involved with satellite-derived PIC
estimates and pigment analyses (see below), we feel the strong predominance
of positive trends in PIC, along with the BATS Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> data,
suggests that coccolithophores are proliferating in this region
(Fig. <xref ref-type="fig" rid="Ch1.F8"/>).</p>
</sec>
<sec id="Ch1.S4.SS3">
  <title>Limitations of this study</title>
      <p>There are several caveats of this study that must be discussed before these
results can be put into context. First, a primary assumption in this paper is
that the haptophyte group is mainly composed of coccolithophores. Though high
haptophyte diversity has been reported in open-ocean regimes
<xref ref-type="bibr" rid="bib1.bibx37" id="paren.69"/>, this does not necessarily contradict the assumption that
coccolithophores are the dominant type of haptophyte. While several studies
describe coccolithophores to be the dominant haptophyte at BATS <xref ref-type="bibr" rid="bib1.bibx39 bib1.bibx62" id="paren.70"><named-content content-type="pre">see
Sect. 2;</named-content></xref>, this claim remains unsupported by
specific data. We use the significant positive correlation between
Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> and cell counts from <xref ref-type="bibr" rid="bib1.bibx31" id="text.71"/> to support our
assumption that Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> is mainly representative of
coccolithophores (Fig. S1). However, as with any study that derives
phytoplankton community composition from signature pigments, inherent
uncertainties are associated with changes in pigment content within a
phytoplankton group over time.</p>
      <p>Overall pigment and PIC concentration per coccolithophore cell may be
influenced by environmental conditions. For example, photo-acclimation and
nutrient limitation can invoke changes in pigment composition or
calcification that are not necessarily associated with changes in overall
abundance <xref ref-type="bibr" rid="bib1.bibx14 bib1.bibx47" id="paren.72"/>. Dominant species shifts
within a phytoplankton group could also influence pigment and/or PIC
measurements. Nevertheless, given upward trends observed for both
Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> and PIC (Figs. <xref ref-type="fig" rid="Ch1.F5"/>,
<xref ref-type="fig" rid="Ch1.F8"/>), we feel the most probable explanation of these
observations is increases in overall coccolithophore abundance. However,
satellite-derived PIC measurements also contain inherent uncertainties.</p>
      <p>Radiance-based algorithms for deriving PIC from satellite reflectance data
are formulated to capture the light-scattering properties of the numerically
dominant coccolithophore, <italic>E. huxleyi</italic>, but also capture detached or
detrital coccoliths <xref ref-type="bibr" rid="bib1.bibx28 bib1.bibx8" id="paren.73"/>. PIC concentrations in
the North Atlantic subtropical gyre are comparatively low, generally
<inline-formula><mml:math display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 2.7 mg m<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, compared to other coccolithophore bloom regions,
which have PIC concentrations between 10 and 100 mg m<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>
<xref ref-type="bibr" rid="bib1.bibx8" id="paren.74"/>. The low concentrations of PIC observed in the North
Atlantic subtropical gyre could be within background error or nearing the
sensitivity threshold of the instrument. Errors in satellite-derived PIC can
arise from atmospheric correction, inclusion of other suspended minerals
(such as silica; <italic>opal contamination</italic>), and/or the influence of chlorophyll
or colored, dissolved organic matter <xref ref-type="bibr" rid="bib1.bibx8" id="paren.75"><named-content content-type="pre">see</named-content></xref>. However, these
errors can be minimized by binning in space and time, as we have done in this
study (using monthly, 9 km data rather than daily, 4 km data). It is also
curious that SeaWiFS-derived PIC data better match the
Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> estimates from BATS than the MODIS PIC
(Fig. <xref ref-type="fig" rid="Ch1.F5"/>). On the one hand, this may be indicative that other
19<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>′</mml:mo></mml:msup></mml:math></inline-formula>-hex-containing haptophytes were responsible for the increase in
Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> at BATS during the last several years of the
time series. On the other hand, the predominance of upward trends in
MODIS-derived PIC for areas around BATS (Fig. <xref ref-type="fig" rid="Ch1.F8"/>b, d) suggests
increases in calcifying haptophytes (coccolithophores). It should be noted
that MODIS PIC from the BATS region (see Fig. <xref ref-type="fig" rid="Ch1.F1"/>) still shows a
significant correlation with Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> (see Sect. 3, Sect. 3.5).</p>
      <p>Finally, we are limited in our trend analysis by the length of the
time series data. Figure <xref ref-type="fig" rid="Ch1.F7"/> demonstrates that different
start and end years can influence the sign and magnitude of our trends in,
e.g., Chl <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mtext>hapto</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>. In this study, we report trends in pigments
from 1990 to 2012 and trends in PIC from 1998 to 2014, both of which, when
employing the full time series of data, imply increases in coccolithophore
populations in the subtropical North Atlantic.</p>
</sec>
<sec id="Ch1.S4.SS4">
  <?xmltex \opttitle{Trends in coccolithophore abundance:\hack{\break} present and future}?><title>Trends in coccolithophore abundance:<?xmltex \hack{\break}?> present and future</title>
      <p>This is not the only study to suggest that coccolithophores are increasing in
abundance in the North Atlantic. Using Continuous Plankton Recorder ship
measurements, Rivero-Calle et al. (2015) document an increase in
coccolithophore occurrence from <inline-formula><mml:math display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula> to <inline-formula><mml:math display="inline"><mml:mo>&gt;</mml:mo></mml:math></inline-formula> 20 % in the North
Atlantic from 1965 to 2010, which they attribute to increasing <inline-formula><mml:math display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>
concentrations. The data region in their study extends from <inline-formula><mml:math display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn>40</mml:mn></mml:mrow></mml:math></inline-formula> to
<inline-formula><mml:math display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 65<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N (subpolar gyre), just north of the subtropical gyre
region focused on in this study. Thus, these studies combined add robustness
to the conclusion that coccolithophores in the North Atlantic are increasing
in abundance and are likely stimulated by additional carbon from
anthropogenic sources.</p>
      <p>Ocean acidification may eventually hinder the growth and calcification of
coccolithophores, however. Recently, <xref ref-type="bibr" rid="bib1.bibx4" id="text.76"/> and <xref ref-type="bibr" rid="bib1.bibx6" id="text.77"/>
introduced the <italic>substrate–inhibitor</italic> ratio, describing the dependence of
calcification on <inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mtext>HCO</mml:mtext><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> (the substrate) and <inline-formula><mml:math display="inline"><mml:mrow class="chem"><mml:msup><mml:mi mathvariant="normal">H</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> (the
inhibitor) concentrations. When this ratio falls below a critical level
(i.e., intercellular to extracellular <inline-formula><mml:math display="inline"><mml:mrow class="chem"><mml:msup><mml:mi mathvariant="normal">H</mml:mi><mml:mo>+</mml:mo></mml:msup></mml:mrow></mml:math></inline-formula> concentration ratio too
low) coccolithophore calcification will be hindered, unless they evolve
a mechanism for coping with low pH <xref ref-type="bibr" rid="bib1.bibx6" id="paren.78"/>. <xref ref-type="bibr" rid="bib1.bibx5" id="text.79"/>
demonstrated that pH starts to have a negative impact below
<inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mtext>pH</mml:mtext><mml:mi>T</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> 7.7, whereas the BATS average <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mtext>pH</mml:mtext><mml:mi>T</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is <inline-formula><mml:math display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn>8.1</mml:mn></mml:mrow></mml:math></inline-formula>.
Thus, critical pH levels will not likely happen for several thousand years
<xref ref-type="bibr" rid="bib1.bibx6" id="paren.80"/>. Other factors besides carbonate chemistry, such as
light availability, temperature, and nutrients, likely influence
coccolithophore growth in present-day oceans.</p><?xmltex \hack{\newpage}?>
</sec>
<sec id="Ch1.S4.SS5">
  <title>Potential implications</title>
      <p>Increases in coccolithophore abundance in the North Atlantic could have
far-reaching ecological, biogeochemical, and climate effects. A shift in
phytoplankton community structure could change trophic dynamics, ultimately
resulting in ecosystem shifts <xref ref-type="bibr" rid="bib1.bibx49" id="paren.81"/>. For example, though the
evolutionary purpose of coccolithophore shells is unclear, some studies
speculate they could protect against grazing <xref ref-type="bibr" rid="bib1.bibx67" id="paren.82"><named-content content-type="pre">see chapter on functions
of coccoliths in</named-content></xref>. Shifts to relatively more coccolithophores
in a phytoplankton assemblage could reduce trophic energy available for
grazers. Coccolithophore shells also function as a ballast material, sinking
faster due to increased weight of the CaCO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> shell, and sequestering
organic matter in the deep ocean <xref ref-type="bibr" rid="bib1.bibx40" id="paren.83"><named-content content-type="pre">Sarmiento and Gruber, 2006; for
a recent study of export at BATS, see</named-content></xref>. Increases in
coccolithophore abundance may have a positive impact on export production,
thus a negative feedback on increasing atmospheric <inline-formula><mml:math display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>. In addition
to bringing carbon to the deep ocean, coccolithophores produce the marine
trace gas dimethyl sulfide <xref ref-type="bibr" rid="bib1.bibx35" id="paren.84"><named-content content-type="pre">DMS;</named-content></xref>, which affects cloud
formation and climate. Therefore, overall increases in coccolithophore
abundance could increase marine DMS production. Furthermore, DMS production
by the coccolithophore, <italic>E. huxeyi</italic>, has been shown to increase with
increasing temperature and ambient <inline-formula><mml:math display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> <xref ref-type="bibr" rid="bib1.bibx3" id="paren.85"/>. Thus,
changes in coccolithophore abundance could have a multitude of effects on
marine ecosystems in the North Atlantic, as well as global carbon cycling and
climate. These effects could be further amplified if other ocean basins show
similar shifts in phytoplankton composition.</p>
      <p>In the subtropical North Atlantic, the upper mixed layer contains
particularly high levels of anthropogenic <inline-formula><mml:math display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> <xref ref-type="bibr" rid="bib1.bibx56 bib1.bibx11" id="paren.86"/>. We speculate that this rise in DIC is contributing to the
increases in coccolithophore pigments and PIC documented in this study.
However, it is not clear if phytoplankton communities in other similar
oceanic ecosystems, e.g., the North Pacific subtropical gyre, will show
similar changes as atmospheric <inline-formula><mml:math display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentrations continue to
increase and inundate the upper mixed layer. The aforementioned ecosystem and
carbon cycle effects of coccolithophore increases could become even more
prevalent in the world's ocean, or, alternatively, coccolithophore growth
could be further modulated by temperature, nutrients, and light. In any case,
monitoring the response of natural coccolithophore populations to increasing
DIC/ocean acidification is essential for understanding effects of
anthropogenic carbon emissions on the world's oceans.</p><?xmltex \hack{\newpage}?>
</sec>
</sec>
<sec id="Ch1.S5" sec-type="conclusions">
  <title>Conclusions</title>
      <p>In this study, we showed that, based on pigment and satellite-derived PIC
measurements, coccolithophores appear to be increasing abundance in the
subtropical North Atlantic. Coccolithophores seem to be responding positively
to additional inorganic carbon in the upper mixed later of the water column, but
are also correlated with NO<inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mi/><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>. These results complement those of
<xref ref-type="bibr" rid="bib1.bibx54" id="text.87"/>, who also document an increase in coccolithophore
occurrence in the North Atlantic, albeit farther north, stimulated by
anthropogenic <inline-formula><mml:math display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> emissions. Increasing coccolithophore abundance
is contrary to what numerous laboratory studies have predicted, highlighting
the importance of in situ observations. Growth of coccolithophores could,
however, be eventually inhibited by decreasing pH and/or other environmental
effects of climate change.</p>
</sec>

      
      </body>
    <back><app-group>
        <supplementary-material position="anchor"><p><bold>The Supplement related to this article is available online at <inline-supplementary-material xlink:href="http://dx.doi.org/10.5194/bg-13-1163-2016-supplement" xlink:title="pdf">doi:10.5194/bg-13-1163-2016-supplement</inline-supplementary-material>.</bold></p></supplementary-material>
        </app-group><ack><title>Acknowledgements</title><p>We would like to thank Rod Johnson, Mike Lomas, and Deborah Steinberg for
access to BATS data, and the BATS research group for their sustained efforts
collecting data. The SeaWiFs and MODIS particulate inorganic carbon data were
obtained from the NASA Ocean Color archive
(<uri>http://oceancolor.gsfc.nasa.gov</uri>). The Fortran 90 code for Mocsy
routines to model the ocean carbonate system were obtained from the Mocsy
website (<uri>http://ocmip5.ipsl.jussieu.fr/mocsy/index.html</uri>). Funding for
this research was provided by NSF (OCE-1155240; OCE-1258995), NASA
(NNX11AF53G), and NOAA (NAO12AR4310058).<?xmltex \hack{\newline}?><?xmltex \hack{\newline}?>
Edited by: J.-P. Gattuso</p></ack><ref-list>
    <title>References</title>

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<abstract-html><p class="p">As environmental conditions evolve with rapidly increasing atmospheric
CO<sub>2</sub>, biological communities will change as species reorient their
distributions, adapt, or alter their abundance. In the surface ocean,
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numerous laboratory and mesocosm experiments, but how they are currently
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that variability in coccolithophore chlorophyll <i>a</i> here is positively
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have suggested that coccolithophore photosynthesis may benefit from
increasing CO<sub>2</sub>, but calcification may eventually be hindered by low
pH<sub><i>T</i></sub> ( &lt;  7.7). Given that DIC has been increasing at BATS by  ∼ 1.4 µmol kg<sup>−1</sup> yr<sup>−1</sup> over the period of 1991–2012, we
speculate that coccolithophore photosynthesis and perhaps calcification may
have increased in response to anthropogenic CO<sub>2</sub> input.</p></abstract-html>
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