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<article xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:oasis="http://docs.oasis-open.org/ns/oasis-exchange/table" dtd-version="3.0"><?xmltex \makeatother\@nolinetrue\makeatletter?>
  <front>
    <journal-meta>
<journal-id journal-id-type="publisher">BG</journal-id>
<journal-title-group>
<journal-title>Biogeosciences</journal-title>
<abbrev-journal-title abbrev-type="publisher">BG</abbrev-journal-title>
<abbrev-journal-title abbrev-type="nlm-ta">Biogeosciences</abbrev-journal-title>
</journal-title-group>
<issn pub-type="epub">1726-4189</issn>
<publisher><publisher-name>Copernicus Publications</publisher-name>
<publisher-loc>Göttingen, Germany</publisher-loc>
</publisher>
</journal-meta>

    <article-meta>
      <article-id pub-id-type="doi">10.5194/bg-13-4513-2016</article-id><title-group><article-title>Low Florida coral calcification rates in the Plio-Pleistocene</article-title>
      </title-group><?xmltex \runningtitle{Low Florida coral calcification rates}?><?xmltex \runningauthor{T. C. Brachert et al.}?>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1">
          <name><surname>Brachert</surname><given-names>Thomas C.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-3904-4804</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Reuter</surname><given-names>Markus</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Krüger</surname><given-names>Stefan</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Klaus</surname><given-names>James S.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff4">
          <name><surname>Helmle</surname><given-names>Kevin</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff5">
          <name><surname>Lough</surname><given-names>Janice M.</given-names></name>
          
        </contrib>
        <aff id="aff1"><label>1</label><institution>Institut für Geophysik und Geologie, Universität
Leipzig, Leipzig, Germany</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>Institute of Earth Sciences, NAWI Graz Geocentre,
University of Graz, Graz, Austria</institution>
        </aff>
        <aff id="aff3"><label>3</label><institution>Department of Geological Sciences, University of Miami,
Coral Gables, Florida, USA</institution>
        </aff>
        <aff id="aff4"><label>4</label><institution>Oceanographic Center, Nova Southeastern University, Fort
Lauderdale, Florida, USA</institution>
        </aff>
        <aff id="aff5"><label>5</label><institution>Australian Institute of Marine Science, Townsville MC,
Australia</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">T. C. Brachert (brachert@uni-leipzig.de)</corresp></author-notes><pub-date><day>12</day><month>August</month><year>2016</year></pub-date>
      
      <volume>13</volume>
      <issue>15</issue>
      <fpage>4513</fpage><lpage>4532</lpage>
      <history>
        <date date-type="received"><day>6</day><month>November</month><year>2015</year></date>
           <date date-type="rev-request"><day>21</day><month>December</month><year>2015</year></date>
           <date date-type="rev-recd"><day>24</day><month>June</month><year>2016</year></date>
           <date date-type="accepted"><day>20</day><month>July</month><year>2016</year></date>
      </history>
      <permissions>
<license license-type="open-access">
<license-p>This work is licensed under a Creative Commons Attribution 3.0 Unported License. To view a copy of this license, visit <ext-link ext-link-type="uri" xlink:href="http://creativecommons.org/licenses/by/3.0/">http://creativecommons.org/licenses/by/3.0/</ext-link></license-p>
</license>
</permissions><self-uri xlink:href="https://bg.copernicus.org/articles/13/4513/2016/bg-13-4513-2016.html">This article is available from https://bg.copernicus.org/articles/13/4513/2016/bg-13-4513-2016.html</self-uri>
<self-uri xlink:href="https://bg.copernicus.org/articles/13/4513/2016/bg-13-4513-2016.pdf">The full text article is available as a PDF file from https://bg.copernicus.org/articles/13/4513/2016/bg-13-4513-2016.pdf</self-uri>


      <abstract>
    <p>In geological outcrops and drill cores from reef frameworks, the skeletons
of scleractinian corals are usually leached and more or less completely
transformed into sparry calcite because the highly porous skeletons formed
of metastable aragonite (CaCO<inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> undergo rapid diagenetic alteration.
Upon alteration, ghost structures of the distinct annual growth bands
often allow for reconstructions of annual extension (<inline-formula><mml:math display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> growth) rates, but
information on skeletal density needed for reconstructions of calcification
rates is invariably lost. This report presents the bulk
density, extension rates and calcification rates of fossil reef corals which
underwent minor diagenetic alteration only. The corals derive from
unlithified shallow water carbonates of the Florida platform (south-eastern
USA), which formed during four interglacial sea level highstands dated
approximately 3.2, 2.9, 1.8, and 1.2 Ma in the mid-Pliocene to early
Pleistocene. With regard to the preservation, the coral skeletons display
smooth growth surfaces with minor volumes of marine aragonite cement within
intra-skeletal porosity. Within the skeletal structures, voids are commonly
present along centres of calcification which lack secondary cements. Mean
extension rates were 0.44 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.19 cm yr<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> (range 0.16 to
0.86 cm yr<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, mean bulk density was 0.96 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.36 g cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> (range 0.55 to 1.83 g cm<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> and calcification rates ranged
from 0.18 to 0.82 g cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> yr<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> (mean 0.38 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.16 g cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> yr<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, values which are 50 % of modern shallow-water reef
corals. To understand the possible mechanisms behind these low calcification
rates, we compared the fossil calcification rates with those of modern
zooxanthellate corals (<inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals) from the Western Atlantic (WA) and
Indo-Pacific calibrated against sea surface temperature (SST). In the fossil
data, we found a widely analogous relationship with SST in <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals from the
WA, i.e. density increases and extension rate decreases with increasing SST,
but over a significantly larger temperature window during the
Plio-Pleistocene. With regard to the environment of coral growth, stable
isotope proxy data from the fossil corals and the overall structure of the
ancient shallow marine communities are consistent with a well-mixed, open
marine environment similar to the present-day Florida Reef Tract, but
variably affected by intermittent upwelling. Upwelling along the platform
may explain low rates of reef coral calcification and inorganic cementation,
but is too localised to account also for low extension rates of Pliocene
<inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals throughout the tropical WA region. Low aragonite
saturation on a more global scale in response to rapid glacial–interglacial
CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> cyclicity is also a potential factor, but Plio-Pleistocene
atmospheric <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula>CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> is generally believed to have been broadly similar to the
present day. Heat stress related to globally high interglacial SST only
episodically moderated by intermittent upwelling affecting the Florida
platform seems to be another likely reason for low calcification rates. From
these observations we suggest some present coral reef systems to be
endangered from future ocean warming.</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

      <?xmltex \hack{\newpage}?>
<sec id="Ch1.S1" sec-type="intro">
  <title>Introduction</title>
<sec id="Ch1.S1.SS1">
  <title>Architecture of the zooxanthellate coral skeleton and systematics of
skeletal calcification</title>
      <p>The skeleton of zooxanthellate corals (<inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals) is a highly organised,
porous hard tissue formed of mineral CaCO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> (aragonite). In X-ray images
of slices parallel to the axes of the corallites (axes of maximum growth),
massive <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> coral skeletons typically display alternations of light and dark
bands. One pair of these “density bands” usually represents 1 year of
growth (Knutson et al., 1972) and forms the basis for the
calibration of internal age models and for estimates of the extension rates,
i.e. the rate of upward and outward growth of the colony surface
(Lough and Cooper, 2011). Skeletal bulk density is a measure of the
pore volumes within the skeleton; the less porosity, the closer the density
will be to that of mineral aragonite (2.93 g cm<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>.
Extension rate and density combine for estimates of calcification rates
according to Eq. (1) (Lough and Cooper, 2011):

                <disp-formula specific-use="align" content-type="numbered"><mml:math display="block"><mml:mtable displaystyle="true"><mml:mtr><mml:mtd/><mml:mtd><mml:mrow><mml:mtext>calcification rate</mml:mtext><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mo>(</mml:mo><mml:mtext>g</mml:mtext><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mtext>cm</mml:mtext><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mtext>yr</mml:mtext><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo><mml:mo>=</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mlabeledtr id="Ch1.E1"><mml:mtd/><mml:mtd/><mml:mtd><mml:mrow><mml:mtext>annual extension rate</mml:mtext><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mo>(</mml:mo><mml:mtext>cm</mml:mtext><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mtext>yr</mml:mtext><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo><mml:mo>×</mml:mo><mml:mtext>density</mml:mtext><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mo>(</mml:mo><mml:msup><mml:mtext>g cm</mml:mtext><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo><mml:mo>.</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

            Alternative concepts of quantifying coral skeletal growth have been reviewed
by Pratchett an co-workers (Pratchett et al., 2015). In
addition to the basic calcification parameters described above, serial
chemical and isotope proxy data retrieved along the direction of maximum
skeletal extension provide independent quantitative measures of the
environment. Stable isotope ratios of the oxygen (<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn>18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O) are
sensitive to sea surface water temperature (SST) and serial samples over the
growth bands allow for the documentation of seasonal or interannual SST
variability on multi-annual timescales (decade and century scale; Felis
and Pätzold, 2004; Leder et al., 1996; Swart, 1983). Limitations of the
method pertain to the influence of seawater <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn>18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O which is
subject to changes due to precipitation and/or evaporation (i.e. salinity),
river discharge and global ice volume. To overcome the problem of variable seawater <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn>18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O for SST estimates, chemical element proxies of SST rather
insensitive to evaporation and/or precipitation (Sr <inline-formula><mml:math display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> Ca, U <inline-formula><mml:math display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> Ca, Mg <inline-formula><mml:math display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> Ca) are in use in
combination with skeletal <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn>18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O (Felis et al., 2004; Shen and
Dunbar, 1995; Swart, 1981). Other chemical elements (Ba <inline-formula><mml:math display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> Ca, Y <inline-formula><mml:math display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> Ca, B <inline-formula><mml:math display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> Ca) and
carbon stable isotope ratios (<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn>13</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>C) have been shown to be
recording sensitively productivity, river discharge, pH, or also subtle
diagenetic alterations (Allison et al., 2007; McCulloch et al., 2003;
Sinclair et al., 1998; Swart et al., 2010).</p>
      <p>In the geological record, the skeletons of scleractinian corals and other
sedimentary grains composed originally of metastable aragonite (CaCO<inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>
usually form moldic porosity, or are more or less completely replaced by
mosaics of blocky calcite spar (Schroeder and Purser, 1986). Although
these secondary alterations generally pose no problem for classical
approaches in palaeoecology and taxonomy, all information stored as isotope
and geochemical proxy data have been reset and makes the corals no longer
available as environmental or geochronological archives. The first
diagenetic alterations of the skeletons still happen at the sea floor, in
deeper parts of the skeleton where the living organic tissues were
previously withdrawn. These alterations represent growths of inorganic
aragonite fiber crystals and subtle dissolution phenomena within the centres
of calcification (COC; Perrin, 2004). Differential diagenetic processes
on crystalline phases and organic matrices also exist and include aragonite–aragonite recrystallisations associated with a loss of micron-sized
growth information (McGregor and Gagan, 2003; Nothdurft and Webb, 2009;
Perrin, 2004). In contrast, in the classical freshwater diagenetic
environment, the primary surface area of the skeleton controls diagenetic
susceptibility and rates of alteration (Constantz, 1986; Dullo,
1984). The freshwater effects are dominated by dissolution via moldic
porosity and subsequent reduction of pore spaces by cementation, or
dissolution and associated crystallisation of blocky calcite without
developing a significant moldic stage (Bathurst, 1975). In the
latter process, ghost structures reflecting original microstructures will be
preserved (Flügel, 2004). More often, ghost structures of the
growth bands form by subtle, diffusion-controlled dissolution which
preferentially starts at the COCs and continues to form increasingly hollow
skeletal structures (Reuter et al., 2005). The rate of
skeleton-internal dissolution via diffusion differs among growth bands
within a specimen and responds to bands of higher and lower density
(Reuter et al., 2005). Given the situation where no secondary
addition of carbonate material has taken place, however, the hollow
structures may still be suitable for isotope and geochemical proxy analysis
(Mertz-Kraus et al., 2008, 2009a, b). Following infilling by late diagenetic calcite spar, this
differential dissolution process leaves records of growth bands from which
skeletal extension can be retrieved (Brachert et al., 2006b; Johnson and
Pérez, 2006; Shinn, 1966). But, this process of dissolution and
subsequent cementation of moldic and intra-particle porosity tends to
destroy all information pertaining to skeletal density. Alteration of the
primary skeleton along this diagenetic pathway is obvious by the presence of
calcite, either replacing skeletal structures or infilling skeletal
porosity. While the petrographic aspect of the calcite documents the type of
freshwater or burial alteration environment, cathodoluminescence analysis
and geochemical data may provide further information as to the redox
character of the diagenetic fluids (Flügel, 2004). Alteration of
aragonite is commonly a rapid process, but in the rare event of low
pore-water circulation rates, corals do escape diagenetic alteration
(Anagnostou et al., 2011; Brachert et al., 2006a, 2016;
Denniston et al., 2008a; Gothmann et al., 2015; Griffiths et al., 2013;
Mertz-Kraus et al., 2008).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F1"><caption><p>Sampling stations in southern Florida, USA (dots). See Table 1 for
details and numbering of sampling stations.</p></caption>
          <?xmltex \igopts{width=170.716535pt}?><graphic xlink:href="https://bg.copernicus.org/articles/13/4513/2016/bg-13-4513-2016-f01.png"/>

        </fig>

      <p>In this study we present calcification data from <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals with rather
intact primary
skeletal density from Plio-Pleistocene interglacial deposits on the Florida
Platform (USA; Fig. 1). We show that corresponding calcification rates were 50 % lower
than they are in the present-day Western Atlantic (WA). For an understanding
of the possible mechanisms behind these low calcification rates, we use
modern analogue data compiled from the literature on recent <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals of the
WA and Indo-Pacific (IP). According to this database, temperature generally
boosts calcification rates in modern <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals, but field studies on single
species of <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> coral suggest the rates to decline beyond optimum values
(Carricart-Ganivet et al., 2012; Cooper et al., 2008). The non-linearity
of calcification rates (g cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> yr<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> derives from inputs of two
independent variables: skeletal growth rate (extension rate, cm yr<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>
and skeletal density (g cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>; Lough, 2008). The temperature
effects on extension rates of <italic>Porites</italic> from the IP are well documented over a large
temperature window and display slow increases with temperature below but
sharp decreases above optimum (Cantin et al., 2010; Carricart-Ganivet et
al., 2012; Lough and Barnes, 2000). The temperature responses of extension
rate and density, however, are generally believed to markedly differ
according to taxon and/or ocean region (Highsmith, 1979) and are
further complicated by proximality trends reflecting temperature and
seasonality gradients, exposure, effluxes of “inimical” bank waters, or
nutrient supplies (Lough and Cooper, 2011; Manzello et al., 2015b). We
discuss whether the patterns of <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> coral calcification found in the fossils
from the Florida Platform is a local or global signature corresponding with
temperature stress or low supersaturation of the sea water with respect to
aragonite (<inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Ω</mml:mi><mml:mtext>aragonite</mml:mtext></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> during the Plio-Pleistocene
interglacials. This study complements two previous papers using
sclerochronology of bivalves and <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals for reconstructions of the
paleoenvironments and long-term changes of seasonality in southern Florida
(Brachert et al., 2014, 2016) and provides a discussion
of the quantitative data in the context of recent global <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> coral
calcification patterns.</p>
</sec>
<sec id="Ch1.S1.SS2">
  <title>The Florida Platform during the Plio-Pleistocene interglacials</title>
      <p>During the Plio-Pleistocene interglacials, global sea levels were up to 22 m
(Miller et al., 2012) or even 35 m higher
(Dowsett and Cronin, 1990) and global mean temperatures 2 to
4 <inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C warmer than present, whereas SSTs of the warm pools at low
latitudes were <inline-formula><mml:math display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 2 <inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C higher than present
(Fedorov et al., 2013; O'Brien et al., 2014). Although dramatic cooling
occurred in the high latitudes, long-term atmospheric <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula>CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> appears to
have remained rather constant after the mid-Pliocene climatic optimum
(<inline-formula><mml:math display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 3 Ma) until the present (Seki et al.,
2010). During and before the optimum, however, <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula>CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> reached values
expected for the end of this century through the burning of fossil fuels
(IPCC, 2013; Seki et al., 2010). Modelling of the oceanic carbonate
systems suggest the long-term <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula>CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> changes to have had no effect on the
saturation state of seawater with regard to <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Ω</mml:mi><mml:mtext>aragonite</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>
(Hönisch et al., 2012), but evidence
exists that rates of microbial carbonate precipitation and skeletal
accretion of planktic foraminifera differed over the last glacial–interglacial cycle (Barker, 1986; Beaufort et al., 2011; Riding et al., 2014).</p>
      <p>The Plio-Pleistocene Florida carbonate platform represents a stack of
shallow marine carbonate sequences formed during sea level highstands which
are separated by paleosols or thin freshwater units formed during lowstands.
A pronounced reef system existed along the south-western margin of the
peninsula (Meeder, 1979). The single unlithified marine units contain
a diverse mollusk and coral fauna comparable to that of the present reef
tracts and back-reef systems (Meeder, 1979; Petuch and Roberts,
2007). Combined oxygen and carbon stable isotope data (<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn>18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O,
<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn>13</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>C) of diagenetically pristine mollusks and <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals from the
platform sediments reflect the complexity of the depositional setting
including brackish to hypersaline and well-mixed, open marine environments
(Brachert et al., 2014; Lloyd, 1969; Tao and Grossman, 2010). The reasons
for high benthic carbonate productivity by mollusks during the
Plio-Pleistocene is controversial, and has been suggested to be due to high
nutrient concentrations resulting from freshwater input (Tao and
Grossman, 2010) or upwelling (Allmon, 2001; Allmon et al., 1995; Brachert
et al., 2016; Emslie and Morgan, 1994; Jones and Allmon, 1995). Recently,
SST estimates for the Pliocene and Pleistocene interglacial units have been
retrieved from <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn>18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O values from the reef corals <italic>Solenastrea</italic> and
<italic>Orbicella</italic> and assuming a modern seawater value for <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn>18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O (<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn>18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O<inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mtext>water</mml:mtext></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> at the Florida Reef Tract (FRT). Apart from assumptions for <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn>18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mtext>water</mml:mtext></mml:msub></mml:math></inline-formula> low
SSTs are
believed to be essentially the effect of upwelling. The large range of SST
values is also likely in part an artifact of the uniform value used for the calculations,
irrespective of sampling locality and stratigraphic unit
(Brachert et al., 2016). In contrast, seasonal SST variability
(<inline-formula><mml:math display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 7 <inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C) inferred from cyclic <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn>18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O
variations of the fossils is more independent of assumptions of <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn>18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mtext>water</mml:mtext></mml:msub></mml:math></inline-formula>. Reconstructed seasonality is not only remarkably
constant within specimens and over the last 3.2 Ma, but also fits modern
surface seasonality along the reef tract (Brachert et al., 2014, 2016). Large seasonality as prevailing off North Carolina
(Macintyre and Pilkey, 1969) or in inner coastal waters of
Florida Bay (FB; Swart et al., 1996) has not been
encountered in the data from the reef corals and has also been taken for
inferring a normal shallow-marine environment without unusual stress from
cool waters or evaporation and freshwater influxes
(Brachert et al., 2014).</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T1" specific-use="star"><caption><p>Sampling sites in southern Florida. The numbering follows that
given by Brachert et al. (2014).</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="7">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:colspec colnum="4" colname="col4" align="left"/>
     <oasis:colspec colnum="5" colname="col5" align="left"/>
     <oasis:colspec colnum="6" colname="col6" align="left"/>
     <oasis:colspec colnum="7" colname="col7" align="left"/>
     <oasis:thead>
       <oasis:row>  
         <oasis:entry colname="col1">No.</oasis:entry>  
         <oasis:entry colname="col2">Site</oasis:entry>  
         <oasis:entry colname="col3">Sample ID</oasis:entry>  
         <oasis:entry colname="col4">Genus</oasis:entry>  
         <oasis:entry colname="col5">GPS coordinates</oasis:entry>  
         <oasis:entry colname="col6">Lithostratigraphy</oasis:entry>  
         <oasis:entry colname="col7">Age</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4"/>  
         <oasis:entry colname="col5"/>  
         <oasis:entry colname="col6"/>  
         <oasis:entry colname="col7">(Ma)</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>  
         <oasis:entry colname="col1">4</oasis:entry>  
         <oasis:entry colname="col2">Palm Beach</oasis:entry>  
         <oasis:entry colname="col3">EP8</oasis:entry>  
         <oasis:entry colname="col4"><italic>Solenastrea</italic></oasis:entry>  
         <oasis:entry colname="col5">26<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>41<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>′</mml:mo></mml:msup></mml:math></inline-formula>44.5<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>′</mml:mo><mml:mo>′</mml:mo></mml:mrow></mml:msup></mml:math></inline-formula> N</oasis:entry>  
         <oasis:entry colname="col6">Bermont Fm.</oasis:entry>  
         <oasis:entry colname="col7">1.2</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">Aggregates</oasis:entry>  
         <oasis:entry colname="col3">EP9A</oasis:entry>  
         <oasis:entry colname="col4"><italic>Solenastrea</italic></oasis:entry>  
         <oasis:entry colname="col5">80<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>21<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>′</mml:mo></mml:msup></mml:math></inline-formula>16.2<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>′</mml:mo><mml:mo>′</mml:mo></mml:mrow></mml:msup></mml:math></inline-formula> W</oasis:entry>  
         <oasis:entry colname="col6">(Holey Land Mb.)</oasis:entry>  
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3">EP9B</oasis:entry>  
         <oasis:entry colname="col4"><italic>Orbicella</italic></oasis:entry>  
         <oasis:entry colname="col5"/>  
         <oasis:entry colname="col6"/>  
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3">EP9C</oasis:entry>  
         <oasis:entry colname="col4"><italic>Solenastrea</italic></oasis:entry>  
         <oasis:entry colname="col5"/>  
         <oasis:entry colname="col6"/>  
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3">EP9D</oasis:entry>  
         <oasis:entry colname="col4"><italic>Solenastrea</italic></oasis:entry>  
         <oasis:entry colname="col5"/>  
         <oasis:entry colname="col6"/>  
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">8</oasis:entry>  
         <oasis:entry colname="col2">Brantley Pit,</oasis:entry>  
         <oasis:entry colname="col3">EP6-S2</oasis:entry>  
         <oasis:entry colname="col4"><italic>Solenastrea</italic></oasis:entry>  
         <oasis:entry colname="col5">27<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>02<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>′</mml:mo></mml:msup></mml:math></inline-formula>59.3<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>′</mml:mo><mml:mo>′</mml:mo></mml:mrow></mml:msup></mml:math></inline-formula> N.</oasis:entry>  
         <oasis:entry colname="col6">Caloosahatchee Fm.</oasis:entry>  
         <oasis:entry colname="col7">1.8</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">Arcadia</oasis:entry>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4"/>  
         <oasis:entry colname="col5">81<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>49<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>′</mml:mo></mml:msup></mml:math></inline-formula>36.7<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>′</mml:mo><mml:mo>′</mml:mo></mml:mrow></mml:msup></mml:math></inline-formula> W</oasis:entry>  
         <oasis:entry colname="col6">(Bee Branch Mb.)</oasis:entry>  
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">9</oasis:entry>  
         <oasis:entry colname="col2">DeSoto Sand</oasis:entry>  
         <oasis:entry colname="col3">452-K1-S6<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">1</mml:mn></mml:msup></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col4"><italic>Solenastrea</italic></oasis:entry>  
         <oasis:entry colname="col5">27<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>03<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>′</mml:mo></mml:msup></mml:math></inline-formula>35.2<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>′</mml:mo><mml:mo>′</mml:mo></mml:mrow></mml:msup></mml:math></inline-formula> N,</oasis:entry>  
         <oasis:entry colname="col6">Caloosahatchee Fm.</oasis:entry>  
         <oasis:entry colname="col7">1.8</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">and Shell LLC</oasis:entry>  
         <oasis:entry colname="col3">452-K3<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">1</mml:mn></mml:msup></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col4"><italic>Solenastrea</italic></oasis:entry>  
         <oasis:entry colname="col5">81<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>47<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>′</mml:mo></mml:msup></mml:math></inline-formula>37.6<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>′</mml:mo><mml:mo>′</mml:mo></mml:mrow></mml:msup></mml:math></inline-formula> W</oasis:entry>  
         <oasis:entry colname="col6">(Bee Branch Mb.)</oasis:entry>  
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">(site 452)</oasis:entry>  
         <oasis:entry colname="col3">452-K4</oasis:entry>  
         <oasis:entry colname="col4"><italic>Solenastrea</italic></oasis:entry>  
         <oasis:entry colname="col5"/>  
         <oasis:entry colname="col6"/>  
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3">452-K5<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">1</mml:mn></mml:msup></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col4"><italic>Solenastrea</italic></oasis:entry>  
         <oasis:entry colname="col5"/>  
         <oasis:entry colname="col6"/>  
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3">452-13<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">1</mml:mn></mml:msup></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col4"><italic>Solenastrea</italic></oasis:entry>  
         <oasis:entry colname="col5"/>  
         <oasis:entry colname="col6"/>  
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3">452-K14</oasis:entry>  
         <oasis:entry colname="col4"><italic>Solenastrea</italic></oasis:entry>  
         <oasis:entry colname="col5"/>  
         <oasis:entry colname="col6"/>  
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3">452-K15<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">1</mml:mn></mml:msup></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col4"><italic>Solenastrea</italic></oasis:entry>  
         <oasis:entry colname="col5"/>  
         <oasis:entry colname="col6"/>  
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3">452-K17<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">1</mml:mn></mml:msup></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col4"><italic>Solenastrea</italic></oasis:entry>  
         <oasis:entry colname="col5"/>  
         <oasis:entry colname="col6"/>  
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4"><italic>Solenastrea</italic></oasis:entry>  
         <oasis:entry colname="col5"/>  
         <oasis:entry colname="col6"/>  
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4"><italic>Solenastrea</italic></oasis:entry>  
         <oasis:entry colname="col5"/>  
         <oasis:entry colname="col6"/>  
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">15</oasis:entry>  
         <oasis:entry colname="col2">Mule Pen</oasis:entry>  
         <oasis:entry colname="col3">EP1-S2</oasis:entry>  
         <oasis:entry colname="col4"><italic>Solenastrea</italic></oasis:entry>  
         <oasis:entry colname="col5">26<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>16<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>′</mml:mo></mml:msup></mml:math></inline-formula>31.93<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>′</mml:mo><mml:mo>′</mml:mo></mml:mrow></mml:msup></mml:math></inline-formula> N,</oasis:entry>  
         <oasis:entry colname="col6">Tamiami Fm.</oasis:entry>  
         <oasis:entry colname="col7">2.9</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">Quarry</oasis:entry>  
         <oasis:entry colname="col3">EP2-S2</oasis:entry>  
         <oasis:entry colname="col4"><italic>Orbicella</italic></oasis:entry>  
         <oasis:entry colname="col5">81<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>39<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>′</mml:mo></mml:msup></mml:math></inline-formula>55.282<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>′</mml:mo><mml:mo>′</mml:mo></mml:mrow></mml:msup></mml:math></inline-formula> W</oasis:entry>  
         <oasis:entry colname="col6">(Golden Gate Mb.)</oasis:entry>  
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3">EP3</oasis:entry>  
         <oasis:entry colname="col4"><italic>Porites</italic></oasis:entry>  
         <oasis:entry colname="col5"/>  
         <oasis:entry colname="col6"/>  
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3">EP5-S2</oasis:entry>  
         <oasis:entry colname="col4"><italic>Solenastrea</italic></oasis:entry>  
         <oasis:entry colname="col5"/>  
         <oasis:entry colname="col6"/>  
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">16</oasis:entry>  
         <oasis:entry colname="col2">Quality</oasis:entry>  
         <oasis:entry colname="col3">Coral #1<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col4"><italic>Solenastrea</italic></oasis:entry>  
         <oasis:entry colname="col5">Not available.</oasis:entry>  
         <oasis:entry colname="col6">Tamiami Fm.</oasis:entry>  
         <oasis:entry colname="col7">3.2</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">Aggregates</oasis:entry>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4"/>  
         <oasis:entry colname="col5"/>  
         <oasis:entry colname="col6">(Pinecrest Mb.,</oasis:entry>  
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">(APAC)</oasis:entry>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4"/>  
         <oasis:entry colname="col5"/>  
         <oasis:entry colname="col6">unit 7)</oasis:entry>  
         <oasis:entry colname="col7"/>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table><table-wrap-foot><p><inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">1</mml:mn></mml:msup></mml:math></inline-formula> From Böcker (2014). <inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula> From Roulier and Quinn (1995).</p></table-wrap-foot></table-wrap>

      <p>In southern Florida, the most extensive growth of reef corals occurs at
present along the FRT on the Atlantic side of the peninsula, whereas only
limited <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> coral growth occurs along the Gulf side in the west and the
shallow FB in the south-east. On the Atlantic side, coral communities are
characterized by diverse stands comprising abundant <italic>Orbicella</italic> (Lidz, 2011),
whereas on the Gulf side and in FB, coral growth is restricted to the two
eurytopic taxa <italic>Siderastrea</italic> and <italic>Solenastrea</italic> (Okazaki et al., 2013; Swart et
al., 1999). Published extension rates for recent <italic>Solenastrea</italic> inhabiting the most marine
segments of FB range from 0.51 to 0.9 cm yr<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>
(Hudson et al., 1989; Swart et al., 1996). Recent
<italic>Solenastrea</italic> has also been recorded to grow under rather cold water conditions along the
US south-eastern Atlantic coast off North Carolina (Macintyre and
Pilkey, 1969), but quantitative calcification data from that setting are not
available, leaving the question unanswered regarding the effects of low SST
on extension and density. Colony sizes at the northern sites similar to
those of the lower latitudes have been suggested to indicate similar
extension and calcification rates, however (Macintyre and Pilkey,
1969).</p>
</sec>
<sec id="Ch1.S1.SS3">
  <title>Materials</title>
      <p><inline-formula><mml:math display="inline"><mml:mi>Z</mml:mi></mml:math></inline-formula> corals were sampled from four distinct stratigraphic units of the Florida
carbonate platform (USA) representing interglacial highstands of sea level
subsequent to the Pliocene warm period. They were dated 3.2, 2.9, 1.8 and
1.2 million years (Ma) of the mid-Pliocene and early Pleistocene (Fig. 1,
Table 1; Brachert et al., 2014). Our own sampling focused
on <italic>Solenastrea</italic> (<inline-formula><mml:math display="inline"><mml:mrow><mml:mi>n</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 11) which is a common taxon in the Plio-Pleistocene shallow water
carbonates of south-western Florida. This data set was complemented by
specimens of <italic>Orbicella</italic> (<inline-formula><mml:math display="inline"><mml:mrow><mml:mi>n</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 2) and <italic>Porites</italic> (<inline-formula><mml:math display="inline"><mml:mrow><mml:mi>n</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 1) and one data set of a <italic>Solenastrea</italic> taken from the
literature comprising serial <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn>18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O and <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn>13</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>C values
and annual extension rates (Roulier and Quinn, 1995; Table 1).</p><?xmltex \hack{\newpage}?>
</sec>
<sec id="Ch1.S1.SS4">
  <title>Methods</title>
      <p>Fossil corals selected for this study were cut into &lt; 1cm thick
slabs along the plane of maximum growth using a conventional rock saw
equipped with a water-cooled diamond blade. All corals were screened for
diagenetic alteration using a binocular microscope and scanning electron
microscope (SEM). In order to detect minimal contaminations by secondary
calcite, powder samples taken at random were prepared for X-ray diffraction
(XRD) and analysed using a Rigaku Miniflex diffractometer at angles between
20 to 60<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> 2<inline-formula><mml:math display="inline"><mml:mi mathvariant="italic">θ</mml:mi></mml:math></inline-formula>. Only skeletal areas that retained
their original aragonite mineralogy (XRD), skeletal porosity and
microstructure without evidence for significant secondary crystal growth or
dissolution (microscopic and SEM observation) were accepted for further
sample preparation. Coral slabs of equal thickness were X-rayed using a
digital X-ray cabinet (SHR 50 V) to identify potential zones of diagenetic
alteration (McGregor and Gagan, 2003; Reuter et al., 2005),
bioerosion, and to document the density bands (Knutson et al.,
1972). One coral specimen (452K1) was analysed geochemically using LA-ICP-MS
(Böcker, 2014) with regard to concentrations of environmentally
sensitive elements (e.g. Sr <inline-formula><mml:math display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> Ca, U <inline-formula><mml:math display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> Ca, B <inline-formula><mml:math display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> Ca) and following recommendations
for evaluating the diagenetic status of corals from strongly lithified and
altered limestone (Anagnostou et al., 2011; Gothmann et al., 2015).
LA-ICP-MS analyses were performed at the Max Planck Institut für Chemie
(Mainz, Germany) using a NewWave UP 213 laser ablation system coupled to a
ThermoFisher Element 2 ICP-MS.</p>
      <p>Quantitative density measurements were made using the software CoralXDS
(freeware) according to Helmle and co-workers (Helmle et al.,
2002). In this approach, the CoralXDS software compares the gray values
recorded in X-radiographs from corals with those from aluminum plates having
the same thickness as a background picture and an aluminum wedge for density
calculations. Measurements were done along transects parallel to the
corallites and parallel to the sampling transects for stable isotope
analyses (Brachert et al., 2016). Bulk skeletal density was
calculated as the mean of all individual measurements taken along a given
transect. Calibration of the measurements was tested by measurements of
standards for zero density (air) and massive aragonite (slice of a
<italic>Glycimeris</italic> bivalve shell having a thickness equaling that of the coral slice).
External analytical precision of the routine measurements was tested by
double blind measurements, and mean deviation from regression (<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.91, <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.05) was found to be 0.04 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.01 g cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>
(range <inline-formula><mml:math display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0.02 to 0.05 g cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>; <inline-formula><mml:math display="inline"><mml:mrow><mml:mi>n</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 18).</p>

      <?xmltex \floatpos{p}?><fig id="Ch1.F2" specific-use="star"><caption><p>SEM images of fossil coral skeletons (<italic>Solenastrea</italic> sp.). <bold>(a)</bold> Overview of
septal surfaces. Curved ridges represent the traces of dismantled dissepiments
(arrows). <bold>(b)</bold> Cross-section of the skeleton showing the radial arrangement
of aragonite fibers. Note holes at the centres of the trabecular fans which
likely reflects preferential dissolution. <bold>(c)</bold> and <bold>(d)</bold> cross-section of a
dissepiment composed of fans of fibers pointing downward. The individual
fibers have distinct rounded edges and rounded tips. <bold>(e)</bold> Primary surface of
the skeleton infested by microborings. <bold>(f)</bold> Cross-section of the skeleton
showing radial fiber crystals and numerous microborings. The microborings
are not constricted by cement or overgrowths. Note: white rectangles and
vertical and/or horizontal arrows show the position of close-ups. Sample
provenance: <bold>(a)</bold>–<bold>(d)</bold> <italic>Solenastrea</italic> sp. (EP 6), Caloosahatchee Fm., Brantley Pit,
Florida, USA; <bold>(e)</bold> <italic>Solenastrea</italic> sp. (EP 5), Tamiami Fm. (Golden Gate Mb.), Mule Pen
quarry; <bold>(f)</bold> <italic>Solenastrea</italic> sp. (EP 9C), Bermont Fm., Palm Beach Aggregates quarry,
Florida, USA.</p></caption>
          <?xmltex \igopts{width=398.338583pt}?><graphic xlink:href="https://bg.copernicus.org/articles/13/4513/2016/bg-13-4513-2016-f02.jpg"/>

        </fig>

      <p>As a baseline for the description and interpretation of the data from the
fossils, we use calcification data from recent corals reported in the
literature deriving equally from tropical and high latitudinal localities
within the shallow-water reef belt (Baker and Weber, 1975; Bessat and
Buigues, 2001; Carricart-Ganivet et al., 2000; Carricart-Ganivet and Merino,
2001; Dodge and Brass, 1984; Dustan, 1975; Elizalde-Rendon et al., 2010;
Fabricius et al., 2011; Goodkin et al., 2011; Graus and Macintyre, 1982;
Helmle et al., 2011; Highsmith et al., 1983; Hudson et al., 1989; Lough,
2008; Mallela and Perry, 2007; Tanzil et al., 2009), and one unpublished
record of <italic>Solenastrea</italic> from FB (FB-6). We present a set of three descriptive diagrams
for a comparison of the patterns of calcification (extension rate, bulk
density, calcification rate) in the modern and fossil <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals on the basis
of linear regression. For a deeper understanding of the processes, we
further apply quadratic polynomial regression models of experimental data
calibrated with SST to account for the established non-linearity of life
processes.</p>
      <p>Stable isotope data described here are the same as reported in companion
publications by Brachert et al. (2014, 2016) where all details of the
methodology of sampling and analytical procedures have been reported in
detail. All carbonate values are given in per mil (‰)
relative to PDB according to the delta notation.</p>
      <p>The scleractinian genus name <italic>Orbicella</italic> is used for corals previously assigned to
<italic>Montastraea</italic> according to the revised taxonomic classification of the reef coral family
Mussidae by  Budd et al. (2012). According to the same work
(op. cit.), the genus <italic>Diploria</italic> has been split into the genera <italic>Diploria</italic> and <italic>Pseudodiploria</italic>. We use the two
genus names in combination as <italic>Diploria</italic>/<italic>Pseudodiploria</italic>, because our database likely incorporates
material from both genera sensu (Budd et al. 2012).</p>
      <p>Statistical analyses were performed using the PAST palaeontological
statistics software package (version 3.01) for education and data analysis
(freeware folk.uio.no/ohammer/past/). Variability of stable isotope data (<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn>18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O, <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn>13</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>C)
was evaluated using the <inline-formula><mml:math display="inline"><mml:mi>t</mml:mi></mml:math></inline-formula> test. A linear bivariate model was
tested as to whether there were no statistical differences in the stable
isotope values in a data set (<inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &gt; 0.05) against the alternate
hypothesis that there were significant differences (<inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.05).
Equality of regression slopes was tested using the <inline-formula><mml:math display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula> test as assumed by
analyses of covariance (ANCOVA). One-way analysis of variance (ANOVA) tested
if there were no statistical differences in the mean growth parameters
(extension, density, calcification) between two given coral sites (<inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &gt; 0.05) against the alternate hypothesis that there were
significant differences (<inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.05).</p>
</sec>
</sec>
<sec id="Ch1.S2">
  <title>Results and discussion</title>
<sec id="Ch1.S2.SS1">
  <title>Preservation</title>
      <p>Visual inspection of the
skeletons using a binocular microscope (<inline-formula><mml:math display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 15 enlargement) and SEM revealed
clean skeletal surfaces not covered systematically by secondary cements
(Fig. 2a, e), except for localised, micron-scaled patches of spherulitic
aragonite or patches of isopachous aragonite (Böcker, 2014). SEM
observation has not revealed any clear evidence for aragonite–aragonite
recrystallisations (Fig. 2) but some porosity within the centres of
calcification (COCs, Fig. 2b). The latter does indeed imply some dissolution
has occurred, and therefore, subtle reductions of skeletal density, however,
since dissolution at the COCs has also been reported from recent specimens
(Perrin, 2004), this effect may also be present in the data from recent
corals.</p>
      <p>Secondary calcite is not documented by XRD analysis (detection limit of the
method <inline-formula><mml:math display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 1 %) and has very rarely been observed to occur
within skeletal growth porosity but never within voids formed by
preferential dissolution of the COCs (Fig. 2b) or microborings (Fig. 2e, f).
Published geochemical screenings using LA-ICP-MS for specimen 452 K1
(Böcker, 2014) documented variable ratios of Sr <inline-formula><mml:math display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> Ca and U <inline-formula><mml:math display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> Ca
which are in phase with serial <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn>18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O data. These element ratios
reflect SST variations consistent with reconstructions on the basis of
serial <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn>18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O values and recent instrumental seasonality along
the FRT (Böcker, 2014). The positive correlation of the Sr <inline-formula><mml:math display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> Ca
with U <inline-formula><mml:math display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> Ca and the B <inline-formula><mml:math display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> Ca ratios fluctuating between 0.3 and 0.6 mmol mol<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> is
fully consistent with modern <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals and implies little alteration has
taken place, especially because boron is known to be a diagenetically highly
volatile element (Allison et al., 2010; Böcker, 2014).
According to our conviction, all these data provide no critical evidence for
the alteration of the original skeleton. Because of this line of reasoning
and low overall calcite content evident from XRD analysis (calcite below
detection limits), we refrained from measuring element ratios sensitive to
the redox conditions of calcite precipitating freshwaters or burial fluids
(Fe <inline-formula><mml:math display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> Ca, Mn <inline-formula><mml:math display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> Ca) and other more sophisticated geochemical methods as potential
measures of alteration (Anagnostou et al., 2011; Gothmann et al., 2015).</p>
      <p>X-radiographs display very regular expressions of density bands, concordant
with the growth structures of the skeleton and stable isotope records, but
no cloudy density variations or patches of high (low) density as documented
from diagenetically altered specimens (Böcker, 2014; Brachert et al.,
2006a; Mertz-Kraus, 2009). The presence of concordant density bands implies
the preservation of original density variations of the skeleton and,
therefore, supports the conclusion of a pristine state of preservation for
the specimens under consideration (Fig. 3). It should be noted that density
was measured using X-ray densitometry along transects defined from visual
inspection of radiographs, and measurements were taken only in segments of
the skeleton not affected by borings (bivalves, sponges, sipunculids) or
embedded encrusting biota (serpulids, bivalves). Bulk density data presented
by this study and in a companion publication (Brachert et al.,
2016) are, therefore, not influenced by the volume of macroscopic biogenic
borings or incrustations, although these effects may also be inherent to
published density data of recent corals. This is an important issue, because
other approaches have used “net density” (i.e. the integrative weight of
carbonate laid down by the coral and encrusting biota minus losses by
bioerosion within a volume) for comparative calcification studies
(Kuffner et al., 2013). In contrast to density, extension rate
is not sensitive to diagenetic alterations and many data have been retrieved
earlier from highly altered fossil coral specimens of Neogene age (Brachert et al., 2006b; Gischler et al., 2009;
Johnson and Pérez, 2006; Reuter et al., 2005). All of these observations
and reasoning suggest the <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals selected for this calcification study to
be essentially unaltered by diagenesis.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T2" specific-use="star"><caption><p>Extension rate, bulk density and calcification rate in recent and
fossil reef corals. Bold: minimum values. Data sets listing only extension
rates not included in this table.</p></caption><oasis:table frame="topbot"><?xmltex \begin{scaleboxenv}{.71}[.71]?><oasis:tgroup cols="11">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="center"/>
     <oasis:colspec colnum="3" colname="col3" align="center"/>
     <oasis:colspec colnum="4" colname="col4" align="center"/>
     <oasis:colspec colnum="5" colname="col5" align="center"/>
     <oasis:colspec colnum="6" colname="col6" align="center"/>
     <oasis:colspec colnum="7" colname="col7" align="center"/>
     <oasis:colspec colnum="8" colname="col8" align="center"/>
     <oasis:colspec colnum="9" colname="col9" align="center"/>
     <oasis:colspec colnum="10" colname="col10" align="center"/>
     <oasis:colspec colnum="11" colname="col11" align="center"/>
     <oasis:thead>
       <oasis:row>  
         <oasis:entry colname="col1">Taxon</oasis:entry>  
         <oasis:entry colname="col2"><inline-formula><mml:math display="inline"><mml:mi>n</mml:mi></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col3">Minimum mean</oasis:entry>  
         <oasis:entry colname="col4">Maximum mean</oasis:entry>  
         <oasis:entry colname="col5">Mean extension</oasis:entry>  
         <oasis:entry colname="col6">Minimum</oasis:entry>  
         <oasis:entry colname="col7">Maximum</oasis:entry>  
         <oasis:entry colname="col8">Mean bulk</oasis:entry>  
         <oasis:entry colname="col9">Minimum</oasis:entry>  
         <oasis:entry colname="col10">Maximum</oasis:entry>  
         <oasis:entry colname="col11">Mean</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3">extension rate</oasis:entry>  
         <oasis:entry colname="col4">extension rate</oasis:entry>  
         <oasis:entry colname="col5">rate</oasis:entry>  
         <oasis:entry colname="col6">bulk density</oasis:entry>  
         <oasis:entry colname="col7">bulk density</oasis:entry>  
         <oasis:entry colname="col8">density</oasis:entry>  
         <oasis:entry colname="col9">calcification rate</oasis:entry>  
         <oasis:entry colname="col10">calcification rate</oasis:entry>  
         <oasis:entry colname="col11">calcification  rate</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3">(cm yr<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>  
         <oasis:entry colname="col4">(cm yr<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>  
         <oasis:entry colname="col5">(cm yr<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>  
         <oasis:entry colname="col6">(g cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>  
         <oasis:entry colname="col7">(g cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>  
         <oasis:entry colname="col8">(g cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>  
         <oasis:entry colname="col9">(g cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> yr<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>  
         <oasis:entry colname="col10">(g cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> yr<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>  
         <oasis:entry colname="col11">(g cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> yr<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"><italic>Orbicella</italic><inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">1</mml:mn></mml:msup></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col2">80</oasis:entry>  
         <oasis:entry colname="col3">0.38</oasis:entry>  
         <oasis:entry colname="col4">1.44</oasis:entry>  
         <oasis:entry colname="col5">0.91 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.23</oasis:entry>  
         <oasis:entry colname="col6">0.78</oasis:entry>  
         <oasis:entry colname="col7">1.94</oasis:entry>  
         <oasis:entry colname="col8">1.37 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.24</oasis:entry>  
         <oasis:entry colname="col9">0.65</oasis:entry>  
         <oasis:entry colname="col10">1.78</oasis:entry>  
         <oasis:entry colname="col11">1.22 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.25</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"><italic>“Diploria/</italic></oasis:entry>  
         <oasis:entry colname="col2">8</oasis:entry>  
         <oasis:entry colname="col3">0.30</oasis:entry>  
         <oasis:entry colname="col4"><bold>0.40</bold></oasis:entry>  
         <oasis:entry colname="col5"><bold>0.35</bold> <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.04</oasis:entry>  
         <oasis:entry colname="col6">0.97</oasis:entry>  
         <oasis:entry colname="col7">1.70</oasis:entry>  
         <oasis:entry colname="col8">1.27 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.31</oasis:entry>  
         <oasis:entry colname="col9">0.31</oasis:entry>  
         <oasis:entry colname="col10">0.68</oasis:entry>  
         <oasis:entry colname="col11">0.45 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.14</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"><italic>Pseudodiploria”</italic><inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4"/>  
         <oasis:entry colname="col5"/>  
         <oasis:entry colname="col6"/>  
         <oasis:entry colname="col7"/>  
         <oasis:entry colname="col8"/>  
         <oasis:entry colname="col9"/>  
         <oasis:entry colname="col10"/>  
         <oasis:entry colname="col11"/>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"><italic>Porites</italic></oasis:entry>  
         <oasis:entry colname="col2">15</oasis:entry>  
         <oasis:entry colname="col3">0.28</oasis:entry>  
         <oasis:entry colname="col4">0.48</oasis:entry>  
         <oasis:entry colname="col5">0.37 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.07</oasis:entry>  
         <oasis:entry colname="col6">1.10</oasis:entry>  
         <oasis:entry colname="col7">1.72</oasis:entry>  
         <oasis:entry colname="col8">1.44 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.20</oasis:entry>  
         <oasis:entry colname="col9">0.31</oasis:entry>  
         <oasis:entry colname="col10">0.77</oasis:entry>  
         <oasis:entry colname="col11">0.53 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.14</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">(W-Atlantic)<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msup></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4"/>  
         <oasis:entry colname="col5"/>  
         <oasis:entry colname="col6"/>  
         <oasis:entry colname="col7"/>  
         <oasis:entry colname="col8"/>  
         <oasis:entry colname="col9"/>  
         <oasis:entry colname="col10"/>  
         <oasis:entry colname="col11"/>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"><italic>Porites</italic></oasis:entry>  
         <oasis:entry colname="col2">78</oasis:entry>  
         <oasis:entry colname="col3">0.30</oasis:entry>  
         <oasis:entry colname="col4">2.38</oasis:entry>  
         <oasis:entry colname="col5">1.28 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.50</oasis:entry>  
         <oasis:entry colname="col6">1.01</oasis:entry>  
         <oasis:entry colname="col7">1.90</oasis:entry>  
         <oasis:entry colname="col8">1.30 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.16</oasis:entry>  
         <oasis:entry colname="col9">0.56</oasis:entry>  
         <oasis:entry colname="col10">2.82</oasis:entry>  
         <oasis:entry colname="col11">1.67 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.49</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">(Indo-Pacific)<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msup></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4"/>  
         <oasis:entry colname="col5"/>  
         <oasis:entry colname="col6"/>  
         <oasis:entry colname="col7"/>  
         <oasis:entry colname="col8"/>  
         <oasis:entry colname="col9"/>  
         <oasis:entry colname="col10"/>  
         <oasis:entry colname="col11"/>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"><italic>Solenastrea</italic></oasis:entry>  
         <oasis:entry colname="col2">1</oasis:entry>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4"/>  
         <oasis:entry colname="col5">0.54</oasis:entry>  
         <oasis:entry colname="col6"/>  
         <oasis:entry colname="col7"/>  
         <oasis:entry colname="col8">1.07</oasis:entry>  
         <oasis:entry colname="col9"/>  
         <oasis:entry colname="col10"/>  
         <oasis:entry colname="col11">0.57</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">(Florida Bay, recent)<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">5</mml:mn></mml:msup></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4"/>  
         <oasis:entry colname="col5"/>  
         <oasis:entry colname="col6"/>  
         <oasis:entry colname="col7"/>  
         <oasis:entry colname="col8"/>  
         <oasis:entry colname="col9"/>  
         <oasis:entry colname="col10"/>  
         <oasis:entry colname="col11"/>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"><italic>Solenastrea</italic><inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">5</mml:mn></mml:msup></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col2">12</oasis:entry>  
         <oasis:entry colname="col3">0.22</oasis:entry>  
         <oasis:entry colname="col4">0.83</oasis:entry>  
         <oasis:entry colname="col5">0.42 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.17</oasis:entry>  
         <oasis:entry colname="col6"><bold>0.55</bold></oasis:entry>  
         <oasis:entry colname="col7">1.22</oasis:entry>  
         <oasis:entry colname="col8">0.87 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.22</oasis:entry>  
         <oasis:entry colname="col9">0.20</oasis:entry>  
         <oasis:entry colname="col10">0.97</oasis:entry>  
         <oasis:entry colname="col11">0.38</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">(1.2, 1.8, 2.9, 3.2 Ma)</oasis:entry>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4"/>  
         <oasis:entry colname="col5"/>  
         <oasis:entry colname="col6"/>  
         <oasis:entry colname="col7"/>  
         <oasis:entry colname="col8"/>  
         <oasis:entry colname="col9"/>  
         <oasis:entry colname="col10"/>  
         <oasis:entry colname="col11"/>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"><italic>Orbicella</italic><inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">5</mml:mn></mml:msup></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col2">2</oasis:entry>  
         <oasis:entry colname="col3"><bold>0.16</bold></oasis:entry>  
         <oasis:entry colname="col4">0.64</oasis:entry>  
         <oasis:entry colname="col5">0.40</oasis:entry>  
         <oasis:entry colname="col6">0.76</oasis:entry>  
         <oasis:entry colname="col7"><bold>1.14</bold></oasis:entry>  
         <oasis:entry colname="col8">0.95</oasis:entry>  
         <oasis:entry colname="col9"><bold>0.18</bold></oasis:entry>  
         <oasis:entry colname="col10"><bold>0.48</bold></oasis:entry>  
         <oasis:entry colname="col11"><bold>0.33</bold></oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">(1.2, 2.9 Ma)</oasis:entry>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4"/>  
         <oasis:entry colname="col5"/>  
         <oasis:entry colname="col6"/>  
         <oasis:entry colname="col7"/>  
         <oasis:entry colname="col8"/>  
         <oasis:entry colname="col9"/>  
         <oasis:entry colname="col10"/>  
         <oasis:entry colname="col11"/>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"><italic>Porites</italic></oasis:entry>  
         <oasis:entry colname="col2">1</oasis:entry>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4"/>  
         <oasis:entry colname="col5">0.89</oasis:entry>  
         <oasis:entry colname="col6"/>  
         <oasis:entry colname="col7"/>  
         <oasis:entry colname="col8"><bold>0.60</bold></oasis:entry>  
         <oasis:entry colname="col9"/>  
         <oasis:entry colname="col10"/>  
         <oasis:entry colname="col11">0.54</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">(2.9 Ma)<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">5</mml:mn></mml:msup></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4"/>  
         <oasis:entry colname="col5"/>  
         <oasis:entry colname="col6"/>  
         <oasis:entry colname="col7"/>  
         <oasis:entry colname="col8"/>  
         <oasis:entry colname="col9"/>  
         <oasis:entry colname="col10"/>  
         <oasis:entry colname="col11"/>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup><?xmltex \end{scaleboxenv}?></oasis:table><?xmltex \begin{scaleboxenv}{.71}[.71]?><table-wrap-foot><p>Data sources:
<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">1</mml:mn></mml:msup></mml:math></inline-formula> Helmle et al. (2011); Carricart-Ganivet and Merino (2001);
Carricart-Ganivet et al. (2000 and sources therein); Highsmith et al. (1983); Mallela and Perry (2007); Dodge and
Brass (1984).
<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula> Logan and Tomascik (1991); Mallela and Perry (2007).
<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msup></mml:math></inline-formula> Elizalde-Rendon et al. (2010); Mallela and Perry (2007); Highsmith et
al. (1983); Manzello (2015a).
<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msup></mml:math></inline-formula> Lough (2008); Fabricius et al. (2011); Bessat and Buiges (2001);
Tanzil et al. (2009); Goodkin et al. (2011).
<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">5</mml:mn></mml:msup></mml:math></inline-formula> This work.</p></table-wrap-foot><?xmltex \end{scaleboxenv}?></table-wrap>

      <?xmltex \floatpos{t}?><fig id="Ch1.F3"><caption><p>Digital X-ray photographs (positive prints) from fossil <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals.
<bold>(a)</bold> <italic>Solenastrea</italic> sp.  (EP 5, Mule Pen Quarry, Tamiami Fm., age 2.5 Ma). <bold>(b)</bold> <italic>Porites</italic> sp. (EP3, Mule
Pen Quarry, Tamiami Fm., age 2.9 Ma). Scale bar 2 cm.</p></caption>
          <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://bg.copernicus.org/articles/13/4513/2016/bg-13-4513-2016-f03.png"/>

        </fig>

</sec>
<sec id="Ch1.S2.SS2">
  <title>Calcification</title>
      <p>The Pliocene and Pleistocene <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals from the Florida Platform display
extension rates that range from 0.16 to 0.86 cm yr<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> with a mean value
of 0.44 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.19 cm yr<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> (<inline-formula><mml:math display="inline"><mml:mrow><mml:mi>n</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 15, <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 1<inline-formula><mml:math display="inline"><mml:mrow><mml:mi mathvariant="italic">σ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, bulk skeletal densities between 0.55 and 1.52 g cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> with a
mean of 0.86 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.22 g cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> (<inline-formula><mml:math display="inline"><mml:mrow><mml:mi>n</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 14), and skeletal
calcification rates from 0.18 to 0.54 g cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> yr<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> with a
mean of 0.34 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.11 g cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> yr<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> (<inline-formula><mml:math display="inline"><mml:mrow><mml:mi>n</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 14; Fig. 4, Table 3). Annual
extension rates and bulk skeletal density show a significant negative
correlation (<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.329; <inline-formula><mml:math display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.026), i.e. density decreases with
increasing extension rates. In contrast, extension rates and calcification
rates display a positive relationship (<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.484; <inline-formula><mml:math display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.004), which
implies that calcification rates also decline with increasing extension.
Lastly, bulk density and calcification rate display no relationship
(<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0.025; <inline-formula><mml:math display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.797; Fig. 4). Although no statistics were applied to the
data of <italic>Orbicella</italic> (<inline-formula><mml:math display="inline"><mml:mrow><mml:mi>n</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 2) and <italic>Porites</italic> (<inline-formula><mml:math display="inline"><mml:mrow><mml:mi>n</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 1) their calcification systematics seem to be
indistinguishable from those of <italic>Solenastrea</italic> according to visual assessment (Fig. 4).
With regard to variability over geological time, extension rate, bulk
density and calcification rate of the three genera <italic>Solenastrea</italic>, <italic>Orbicella</italic> and <italic>Porites</italic> from the Florida
platform were plotted according to four time slices 3.2, 2.9, 1.8, and 1.2 Ma (Fig. 5, Tables 1, 2), and all calcification data were found to be
indistinguishable among time slices according to ANOVA (<inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &gt; 0.05). Published extension rates of <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals reported from various other
fossil low-latitude sites of the WA region are <inline-formula><mml:math display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 0.3 cm yr<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in late Miocene reefs (Denniston et al.,
2008b) and range from 0.3 to 0.8 cm yr<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in Pliocene units
(Johnson and Pérez, 2006), whereas they were 0.2 and 1.0 cm yr<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in the Florida Reef Tract
(FRT) during the late Pleistocene (0.13 Ma; Gischler et al., 2009). As such, they are all consistent
with the low extension rates reported by our study (Fig. 4). Importantly,
skeletal density data are not available from these sites due to pervasive
diagenetic alterations, and therefore, skeletal density and calcification
rates are unknown.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F4"><caption><p>Calcification systematics in three Pliocene and Pleistocene <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> coral
genera from the Florida Platform. Inset summarizes published extension rates
from the Pliocene of the Caribbean region; corresponding density values and
calcification rates are not available (Johnson and Pérez, 2006).
“<italic>Diploria</italic>” refers to the two taxa <italic>Diploria</italic> and <italic>Pseudodiploria</italic> (Budd et al., 2012).</p></caption>
          <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://bg.copernicus.org/articles/13/4513/2016/bg-13-4513-2016-f04.png"/>

        </fig>

      <p>For the recent time slice (0 Ma) we use analogue data from southern Florida
published in the literature and complemented in part by one new set of
average values (FB-6) published here for the first time (Table 4).</p>
      <p>The extension rates of recent <italic>Solenastrea</italic> from FB range from 0.51 to 0.89 cm yr<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>
and are fully within the range found in the Pliocene and Pleistocene corals
(Fig. 5). Density values have not been published from FB <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals so far; we
measured a density of 1.07 g cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> (Table 2) which is compatible with
fossil <italic>Solenastrea</italic>. The same is true for the <italic>Orbicella</italic> from FRT as compared to the two fossil
<italic>Orbicella</italic>, whereas the density records available from the FRT-<italic>Porites</italic> are substantially
above that from the fossil <italic>Porites</italic> which is near the lower end of the spectrum
(Fig. 5, Table 4). Finally, calcification rates of all three taxa of the
recent <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals in FB and FRT tend to be above the Plio-Pleistocene
reconstructions (Fig. 5), and the average of all recent corals is
significantly higher than the fossil average value (<inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.05). From
these observations the following three generalisations can be made: (1) the
extension rates of the fossil <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals are indistinguishable from those of
the recent corals, and no distinction exists between FB and FRT, nearshore
and offshore. (2) Bulk density is essentially the same in recent and fossil
Florida <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals, although some tendency towards higher bulk density as
compared to the fossils may exist. (3) The calcification rates of the recent
<inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals are all higher than those of the fossils (Fig. 5).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F5"><caption><p>Temporal variation of the mean extension rate (<inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula>1<inline-formula><mml:math display="inline"><mml:mrow><mml:mi mathvariant="italic">σ</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, bulk density and mean calcification rate in three <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> coral
genera (<italic>Solenastrea</italic>, <italic>Orbicella</italic>, <italic>Porites</italic>) from the Pliocene–Pleistocene Florida platform. Recent data
from (Helmle et al., 2011; Hudson et al., 1989; Manzello et al., 2015a;
Swart et al., 1996) and own materials (Florida Bay).</p></caption>
          <?xmltex \igopts{width=213.395669pt}?><graphic xlink:href="https://bg.copernicus.org/articles/13/4513/2016/bg-13-4513-2016-f05.png"/>

        </fig>

      <p>Stable isotope proxy data of the growth environments from the corals used
here for calcification records were described and interpreted in a companion
paper (Brachert et al., 2016) and will not be repeated in
detail. For estimates of SSTs, an equation using skeletal <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn>18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O
calibrated for <italic>Orbicella</italic> from FRT was applied (Leder et al., 1996) and
making the assumption of a constant value of <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn>18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O<inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mtext>water</mml:mtext></mml:msub><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 1.1 ‰ (recent FRT water) for all relevant interglacials
(Brachert et al., 2016). On this basis, we found average annual
SSTs between 19 and 26 <inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C which were likely moderated by
intermittent upwelling. Reconstructed temperatures display a negative
correlation with annual extension rates (<inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.05) and a positive
relationship with bulk density (<inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.05). In contrast, no clear
relation has been found between SST and calcification rate
(<inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &gt; 0.05), although visual inspection suggests an inverse correlation (Fig. 6).
Making other assumptions for <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn>18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mtext>water</mml:mtext></mml:msub></mml:math></inline-formula> (but keeping the
value constant for all specimens) will yield other temperature values, but
the range of values between minima and maxima of average annual temperatures
will remain unaffected.</p>
</sec>
<sec id="Ch1.S2.SS3">
  <title>Significance of the calcification data</title>
      <p>Calcification of <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals responds to a complex array of environmental
factors acting in concert as to control net calcification (Lough and
Cooper, 2011). Next to water temperature, these factors include water depth,
wave exposure, admixtures of “inimical waters” from carbonate bank
interiors, high and low salinity or freshwater discharge, nutrient
concentration, pH and aragonite saturation and ocean region; Cohen and Holcomb, 2009; D'Olivio et al., 2015;
Ferrier-Pagès et al., 2000; Ginsburg and Shinn, 1964; Gladfelter et al.,
1978; Hofmann et al., 2011; Johnson and Pérez, 2006; Klein et al., 1993;
Lough and Cooper, 2011; Shinn, 1966). Thus, low calcification rates of the
fossil corals can have multiple causes which are eventually hard to
reconstruct. In attempting to sort out small-scale effects along
environmental gradients, patterns related to taxonomy and non-linear
calcification responses, we use a big picture approach beyond environmental
gradients and regional acclimatisation effects and compare the reconstructed
growth parameters within the frame of measured systems in southern Florida,
the WA and IP (see methods section for data sources).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F6"><caption><p>Diagrams showing annual extension rate (cm yr<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, bulk
density (g cm<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> and annual calcification rate (g cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> yr<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>
with water temperature inferred from published <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn>18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O values
(Brachert et al., 2016).</p></caption>
          <?xmltex \igopts{width=213.395669pt}?><graphic xlink:href="https://bg.copernicus.org/articles/13/4513/2016/bg-13-4513-2016-f06.png"/>

        </fig>

<?xmltex \hack{\newpage}?>
</sec>
<sec id="Ch1.S2.SS4">
  <?xmltex \opttitle{Environmental effects on calcification in recent and fossil $z$~corals
from southern Florida}?><title>Environmental effects on calcification in recent and fossil <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals
from southern Florida</title>
      <p>We use modern analogue data from southern Florida for an evaluation of the
calcification rates documented here for <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals from Pliocene and
Pleistocene units of the Florida Platform. In southern Florida, environments
of <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> coral growth range from the salinity stressed environment of the FB
where <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals only thrive within the most marine parts, to the open
settings of the FRT variably affected by the outflow of “inimical” waters
from the interior bank. Within this region, the highest rates of outflow of
bankwater occur in the Middle Florida Keys where also the lowest
calcification rates have been observed (Manzello et al.,
2015a). Negative interference by inimical bank waters with <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> coral growth
has been hypothesised, therefore, to be smaller in offshore reefs
(&gt; 4.5 km from coast) compared to inshore reefs (&lt; 4.5 km
from coast). Nonetheless, long-term data averaged from several <italic>Porites</italic> colonies
(Manzello et al., 2015a) do not indicate to a measurable
negative spatial onshore–offshore effect on <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> coral calcification. A
proximality effect is also not inherent to the averaged analogue data shown
in Fig. 5: although low calcification of <italic>Solenastrea</italic> in FB may be considered
compatible with the inimical bank water hypothesis, even lower calcification
rates of <italic>Porites</italic> from an offshore reef is clearly not. Apparently, small-scale
spatial stress effects reported in the literature seem to be averaged out
from the big picture. Because also no difference in calcification responses
to environmental effects was found between <italic>Orbicella</italic> <italic>cavernosa</italic> and <italic>Porites</italic> <italic>astreoides</italic> (Manzello
et al., 2015a), we consider the fossil data and recent analog data
homogeneous entities not biased by systematic-taxonomical effects. From this
line of reasoning we conclude the low calcification rates of the long-term
fossil record from southern Florida not to reflect a restricted growth
environment.</p>
</sec>
<sec id="Ch1.S2.SS5">
  <?xmltex \opttitle{Descriptive patterns of calcification in recent and fossil
$z$~corals}?><title>Descriptive patterns of calcification in recent and fossil
<inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals</title>
      <p>The calcification records presented by this study have been classified
according to three descriptive patterns: (1) a negative relationship of
extension rate with density being fully compatible with patterns of recent
<italic>Orbicella.</italic> In recent <italic>Porites</italic>, the situation is more complex, because the pattern is
documented only in the IP (Lough, 2008), but not in the WA
(Elizalde-Rendon et al., 2010). (2) Extension rate and
calcification rate showing a positive relation has been described also in
recent <italic>Porites</italic> from the WA and IP (Elizalde-Rendon et al., 2010;
Lough, 2008), but not in <italic>Orbicella</italic> from the WA which differ by a negative slope
(Carricart-Ganivet, 2004). This is a surprising result, because the
skeletal organization of <italic>Solenastrea</italic> closely resembles that of <italic>Orbicella</italic> and differs
significantly from <italic>Porites</italic>, a pattern which was expected to be reflected in the
systematics of calcification. (3) The fossil <italic>Solenastrea</italic> and recent <italic>Orbicella</italic> and <italic>Porites</italic> display
deviating relationships with regard to bulk density and calcification rates:
while the fossil <italic>Solenastrea</italic> shows no relationship, it is positive in <italic>Orbicella</italic> and WA-<italic>Porites</italic> but
negative in IP-<italic>Porites</italic> (Carricart-Ganivet, 2004; Elizalde-Rendon et al., 2010;
Lough, 2008). When plotted against water temperatures, the three
calcification parameters and qualitative trends of the fossils are rather
consistent with those of recent <italic>Orbicella</italic> from the WA (Carricart-Ganivet,
2004), both, in terms of the overall effects of temperature on extension
rate and on bulk density. They differ, however, by the absence of a
temperature control on calcification rates (or the presence of a likely
negative slope according to visual inspection) in the fossils.</p>
</sec>
<sec id="Ch1.S2.SS6">
  <?xmltex \opttitle{Comparative analysis of fossil and recent $z$~coral calcification}?><title>Comparative analysis of fossil and recent <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> coral calcification</title>
      <p>Calcification rates recorded by the fossil <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals are conspicuously low as
compared to recent <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals from Florida (Fig. 5) which may represent,
therefore, possibly no suitable analogue system. First of all, it should be
noted, however, that the calcification data from the fossil <italic>Solenastrea</italic> (plus
<italic>Orbicella</italic> and <italic>Porites</italic>) appear to be from a larger window of average annual temperatures
(<inline-formula><mml:math display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 7 <inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C) than covered by field studies on recent
<inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> coral growth. Temperature differences behind growth data from southern
Florida are rather small, and even growth data collected in the Gulf of
Mexico and the Caribbean Sea both cover small gradients of average annual
SSTs (<inline-formula><mml:math display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 1 <inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C) where <italic>Orbicella</italic> (<italic>Orbicella</italic> <italic>annularis</italic>) display positive
calcification responses with increasing SST (Carricart-Ganivet, 2004).
Although calcification rates are the same in both regions, average annual
SSTs differ by <inline-formula><mml:math display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 2 <inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C and likely reflect the
acclimatisation of the same morphological taxon to regionally different SST
regimes. Thus, acclimatisation effects on calcification seem to play a role
within rather small observational scales. Within the same region, another
species of the same genus (<italic>Orbicella falveolata</italic>), however, responds with declining calcification
to this subtle gradient of <inline-formula><mml:math display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 1 <inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C of average annual
SST change (Carricart-Ganivet et al., 2012), either because
acclimatisation is not yet fully accomplished, or because the SST regime is
near the upper threshold of ecological tolerance of <inline-formula><mml:math display="inline"><mml:mi>O</mml:mi></mml:math></inline-formula>. <italic>falveolata</italic> allowing no further
positive acclimatisation. We assume, the latter is more likely and,
therefore, calcification responses to SST seem to be non-linear over the
full range of ecological tolerance of this and other taxa. This sort of
non-linear response of calcification has been predicted by a modelling study
on the ecological tolerance of <italic>Orbicella</italic> over a temperature window of 3–4 <inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C (Worum et al., 2007) and is also well documented
by comprehensive field studies on <italic>Porites</italic> from the Great Barrier Reef system (IP; Cooper et al., 2008; De'ath et al., 2009, 2013). The
tipping point between increases and decreases of calcification rates was
found to be between 26  and 27 <inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C for <italic>Porites</italic> and
<italic>Orbicella</italic> (Carricart-Ganivet et al., 2012; Cooper et al., 2008), or 28–29 <inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C according to modelling (Worum et al., 2007). This
kind of large-scale observational data seems essential for interpreting
fossil calcification data and, therefore, we discuss the calcification data
in the context of the entire WA and IP.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T3" specific-use="star"><caption><p>Bulk calcification data of recent reef corals in the Indo-Pacific
and Western Atlantic together with fossil reef corals from Florida (USA).
Bold: minimum values. Data sets listing only extension rates not included in
this table.</p></caption><oasis:table frame="topbot"><?xmltex \begin{scaleboxenv}{.78}[.78]?><oasis:tgroup cols="11">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="center"/>
     <oasis:colspec colnum="3" colname="col3" align="center"/>
     <oasis:colspec colnum="4" colname="col4" align="center"/>
     <oasis:colspec colnum="5" colname="col5" align="center"/>
     <oasis:colspec colnum="6" colname="col6" align="center"/>
     <oasis:colspec colnum="7" colname="col7" align="center"/>
     <oasis:colspec colnum="8" colname="col8" align="center"/>
     <oasis:colspec colnum="9" colname="col9" align="center"/>
     <oasis:colspec colnum="10" colname="col10" align="center"/>
     <oasis:colspec colnum="11" colname="col11" align="center"/>
     <oasis:thead>
       <oasis:row>  
         <oasis:entry colname="col1">Region with</oasis:entry>  
         <oasis:entry colname="col2"><inline-formula><mml:math display="inline"><mml:mi>n</mml:mi></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col3">Extension</oasis:entry>  
         <oasis:entry colname="col4">Extension</oasis:entry>  
         <oasis:entry colname="col5">Extension</oasis:entry>  
         <oasis:entry colname="col6">Density</oasis:entry>  
         <oasis:entry colname="col7">Density</oasis:entry>  
         <oasis:entry colname="col8">Density</oasis:entry>  
         <oasis:entry colname="col9">Calcification rate</oasis:entry>  
         <oasis:entry colname="col10">Calcification rate</oasis:entry>  
         <oasis:entry colname="col11">Calcification rate</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">geological age</oasis:entry>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3">min</oasis:entry>  
         <oasis:entry colname="col4">max</oasis:entry>  
         <oasis:entry colname="col5">mean</oasis:entry>  
         <oasis:entry colname="col6">min</oasis:entry>  
         <oasis:entry colname="col7">max</oasis:entry>  
         <oasis:entry colname="col8">mean</oasis:entry>  
         <oasis:entry colname="col9">min</oasis:entry>  
         <oasis:entry colname="col10">max</oasis:entry>  
         <oasis:entry colname="col11">mean</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3">(cm yr<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>  
         <oasis:entry colname="col4">(cm yr<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>  
         <oasis:entry colname="col5">(cm yr<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>  
         <oasis:entry colname="col6">(g cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>  
         <oasis:entry colname="col7">(g cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>  
         <oasis:entry colname="col8">(g cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>  
         <oasis:entry colname="col9">(g cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> yr<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>  
         <oasis:entry colname="col10">(g cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> yr<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>  
         <oasis:entry colname="col11">(g cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> yr<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>  
         <oasis:entry colname="col1">Indo-Pacific, recent<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">1</mml:mn></mml:msup></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col2">78</oasis:entry>  
         <oasis:entry colname="col3">0.30</oasis:entry>  
         <oasis:entry colname="col4">2.38</oasis:entry>  
         <oasis:entry colname="col5">1.28 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.50</oasis:entry>  
         <oasis:entry colname="col6">1.01</oasis:entry>  
         <oasis:entry colname="col7">1.90</oasis:entry>  
         <oasis:entry colname="col8">1.30 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.16</oasis:entry>  
         <oasis:entry colname="col9">0.56</oasis:entry>  
         <oasis:entry colname="col10">2.82</oasis:entry>  
         <oasis:entry colname="col11">1.67 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.49</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">Western Atlantic, recent<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col2">103</oasis:entry>  
         <oasis:entry colname="col3">0.28</oasis:entry>  
         <oasis:entry colname="col4">1.44</oasis:entry>  
         <oasis:entry colname="col5">0.79 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.31</oasis:entry>  
         <oasis:entry colname="col6">0.78</oasis:entry>  
         <oasis:entry colname="col7">1.94</oasis:entry>  
         <oasis:entry colname="col8">1.37 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.24</oasis:entry>  
         <oasis:entry colname="col9">0.31</oasis:entry>  
         <oasis:entry colname="col10">1.78</oasis:entry>  
         <oasis:entry colname="col11">1.06 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.38</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">Florida Bay, recent<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msup></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col2">1</oasis:entry>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4"/>  
         <oasis:entry colname="col5">0.54</oasis:entry>  
         <oasis:entry colname="col6"/>  
         <oasis:entry colname="col7"/>  
         <oasis:entry colname="col8">1.07</oasis:entry>  
         <oasis:entry colname="col9"/>  
         <oasis:entry colname="col10"/>  
         <oasis:entry colname="col11">0.57</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">Florida (USA),</oasis:entry>  
         <oasis:entry colname="col2">15</oasis:entry>  
         <oasis:entry colname="col3"><bold>0.16</bold></oasis:entry>  
         <oasis:entry colname="col4"><bold>0.86</bold></oasis:entry>  
         <oasis:entry colname="col5"><bold>0.44</bold> <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> <bold>0.19</bold></oasis:entry>  
         <oasis:entry colname="col6"><bold>0.55</bold></oasis:entry>  
         <oasis:entry colname="col7"><bold>1.22</bold></oasis:entry>  
         <oasis:entry colname="col8"><bold>0.86</bold> <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> <bold>0.22</bold></oasis:entry>  
         <oasis:entry colname="col9"><bold>0.18</bold></oasis:entry>  
         <oasis:entry colname="col10"><bold>0.54</bold></oasis:entry>  
         <oasis:entry colname="col11"><bold>0.34</bold> <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> <bold>0.11</bold></oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">Plio-Pleistocene<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msup></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4"/>  
         <oasis:entry colname="col5"/>  
         <oasis:entry colname="col6"/>  
         <oasis:entry colname="col7"/>  
         <oasis:entry colname="col8"/>  
         <oasis:entry colname="col9"/>  
         <oasis:entry colname="col10"/>  
         <oasis:entry colname="col11"/>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup><?xmltex \end{scaleboxenv}?></oasis:table><?xmltex \begin{scaleboxenv}{.78}[.78]?><table-wrap-foot><p>Data sources:
<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">1</mml:mn></mml:msup></mml:math></inline-formula> Lough (2008); Fabricius et al. (2011); Bessat and Buiges (2001);
Tanzil et al. (2009); Goodkin et al. (2011).
<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula> Logan and Tomascik (1991); Elizalde-Rendon et al. (2010); Malella and Perry (2007); Carricart and Merino (2001);
Carricart-Ganivet et al. (2000 and sources therein); Highsmith et al. (1983); Dodge and Brass (1984);
Manzello (2015).
<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msup></mml:math></inline-formula> This work.</p></table-wrap-foot><?xmltex \end{scaleboxenv}?></table-wrap>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T4" specific-use="star"><caption><p>Calcification data from recent <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals, southern Florida.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="5">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="center"/>
     <oasis:colspec colnum="3" colname="col3" align="center"/>
     <oasis:colspec colnum="4" colname="col4" align="center"/>
     <oasis:colspec colnum="5" colname="col5" align="left"/>
     <oasis:thead>
       <oasis:row>  
         <oasis:entry colname="col1">Taxon and site</oasis:entry>  
         <oasis:entry colname="col2">Extension rate</oasis:entry>  
         <oasis:entry colname="col3">Bulk density</oasis:entry>  
         <oasis:entry colname="col4">Calcification rate</oasis:entry>  
         <oasis:entry colname="col5">Source</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">(cm yr<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>  
         <oasis:entry colname="col3">(g cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>  
         <oasis:entry colname="col4">(g cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> yr<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>)</oasis:entry>  
         <oasis:entry colname="col5"/>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>  
         <oasis:entry colname="col1"><italic>Solenastrea</italic>,</oasis:entry>  
         <oasis:entry colname="col2">0.89</oasis:entry>  
         <oasis:entry colname="col3">NA</oasis:entry>  
         <oasis:entry colname="col4">NA</oasis:entry>  
         <oasis:entry colname="col5">Hudson et al. (1989)</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">FB</oasis:entry>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4"/>  
         <oasis:entry colname="col5"/>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"><italic>Solenastrea</italic>,</oasis:entry>  
         <oasis:entry colname="col2">0.51</oasis:entry>  
         <oasis:entry colname="col3">NA</oasis:entry>  
         <oasis:entry colname="col4">NA</oasis:entry>  
         <oasis:entry colname="col5">Swart et al. (1996)</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">FB (FB-6)</oasis:entry>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4"/>  
         <oasis:entry colname="col5"/>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"><italic>Porites</italic>,</oasis:entry>  
         <oasis:entry colname="col2">0.43</oasis:entry>  
         <oasis:entry colname="col3">1.61</oasis:entry>  
         <oasis:entry colname="col4">0.69</oasis:entry>  
         <oasis:entry colname="col5">Manzello et al. (2015a)</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">FRT, inshore</oasis:entry>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4"/>  
         <oasis:entry colname="col5"/>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"><italic>Porites</italic>, FRT, offshore</oasis:entry>  
         <oasis:entry colname="col2">0.35</oasis:entry>  
         <oasis:entry colname="col3">1.58</oasis:entry>  
         <oasis:entry colname="col4">0.55</oasis:entry>  
         <oasis:entry colname="col5">Manzello et al. (2015a)</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">FRT, offshore</oasis:entry>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4"/>  
         <oasis:entry colname="col5"/>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"><italic>Orbicella</italic>,</oasis:entry>  
         <oasis:entry colname="col2">0.79</oasis:entry>  
         <oasis:entry colname="col3">1.18</oasis:entry>  
         <oasis:entry colname="col4">0.91</oasis:entry>  
         <oasis:entry colname="col5">Helmle et al. (2011)</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">FRT</oasis:entry>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4"/>  
         <oasis:entry colname="col5"/>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"><italic>Solenastrea</italic>, FB (FB-6)</oasis:entry>  
         <oasis:entry colname="col2">0.54</oasis:entry>  
         <oasis:entry colname="col3">1.07</oasis:entry>  
         <oasis:entry colname="col4">0.58</oasis:entry>  
         <oasis:entry colname="col5">this work</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <?xmltex \floatpos{t}?><fig id="Ch1.F7"><caption><p>Mean extension rate, bulk skeletal density and mean calcification
rate of reef corals sorted according to taxon and geological time (Western
Atlantic region). Magenta: <italic>Orbicella</italic>, green: <italic>Porites</italic>, red: <italic>Diploria</italic>, blue: <italic>Solenastrea</italic>. Filled symbols: recent,
open symbols: fossil. Recent corals compiled from the literature
(Carricart-Ganivet et al., 2000; Carricart-Ganivet and Merino, 2001;
Dodge and Brass, 1984; Elizalde-Rendon et al., 2010; Highsmith et al., 1983;
Hudson et al., 1989; Logan and Tomascik, 1991; Mallela and Perry, 2007) and
one unpublished record from <italic>Solenastrea</italic> (FB-6). Inset in uppermost panel shows range of
extension rates of <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals of Pliocene age in the Caribbean region (various
taxa) for comparison (Johnson and Pérez, 2006). Note clustering
of fossil corals at low extension rates, low density and low calcification
rates.</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://bg.copernicus.org/articles/13/4513/2016/bg-13-4513-2016-f07.png"/>

        </fig>

<sec id="Ch1.S2.SS6.SSS1">
  <title>Florida and Western Atlantic</title>
      <p>Within the larger context of the WA, all parameters of calcification are
higher in the recent <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals than in the fossil <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals. The extension
rates of the fossils with a mean of 0.44 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.19 cm yr<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>
and ranging from 0.16 to 0.86 cm yr<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> contrast with substantially
higher mean values of 0.79 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.31 cm yr<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> and ranges
between 0.28 and 1.44 cm yr<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in the recent WA (Fig. 7;
Table 3). Bulk density of the fossil <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals displays a variability
comparable to that of recent <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals but the average from all fossil
specimens (0.86 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.22 g cm<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> is substantially lower
than in the recent <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals (1.37 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.24 g cm<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> from
the WA in our database (Fig. 7, Table 3). Maximum values (1.22 g cm<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>
are lower than in the modern corals (1.94 g cm<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> and minimum values of
0.55 g cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> are also below minimum values of recent WA <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals (0.78 g cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>; Table 3). Calcification rates inferred from this set of inputs for
any given extension rate are <inline-formula><mml:math display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 50 % lower in fossils than
those from modern <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F8" specific-use="star"><caption><p>Extension rate, density and calcification rate of recent and
fossil <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals. Indo-Pacific (green triangles), Western Atlantic (red
squares) and Florida fossils (blue diamonds). <bold>(a–c)</bold> Descriptive diagrams
for relationships of extension rate, density, and calcification rate within
the temperature windows shown in <bold>(d–f)</bold> for modern corals. Recent corals
compiled from literature (Carricart-Ganivet et al., 2000;
Carricart-Ganivet and Merino, 2001; Dodge and Brass, 1984; Elizalde-Rendon
et al., 2010; Highsmith et al., 1983; Hudson et al., 1989; Lough, 2008;
Mallela and Perry, 2007; Tanzil et al., 2009). <inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>*</mml:mo></mml:msup></mml:math></inline-formula> Red horizontal bar in
Fig. 7a summarizes published extension rates of <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals of Pliocene age in the
Caribbean region (various taxa) for comparison (Johnson and
Pérez, 2006). <bold>(d–f)</bold> Extension rate, bulk density and calcification
rates as a function of average annual temperature. Results of linear and
quadratic polynomial regression are as follows: <bold>(a)</bold> Western Atlantic <inline-formula><mml:math display="inline"><mml:mrow><mml:mi>y</mml:mi><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mn>0.2958</mml:mn><mml:mo>×</mml:mo><mml:mo>+</mml:mo><mml:mn>16 072</mml:mn></mml:mrow></mml:math></inline-formula>;
<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.1399, <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.05. Indo-Pacific <inline-formula><mml:math display="inline"><mml:mrow><mml:mi>y</mml:mi><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mn>0.2499</mml:mn><mml:mo>×</mml:mo><mml:mo>+</mml:mo><mml:mn>1.6358</mml:mn></mml:mrow></mml:math></inline-formula>;
<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.5167, <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.05. Florida (fossils) <inline-formula><mml:math display="inline"><mml:mrow><mml:mi>y</mml:mi><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mn>0.7607</mml:mn><mml:mo>×</mml:mo><mml:mo>+</mml:mo></mml:mrow></mml:math></inline-formula>1.2774;
<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.4297, <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.05. <bold>(b)</bold> Western Atlantic <inline-formula><mml:math display="inline"><mml:mrow><mml:mi>y</mml:mi><mml:mo>=</mml:mo><mml:mn>1.0235</mml:mn><mml:mo>×</mml:mo><mml:mo>+</mml:mo></mml:mrow></mml:math></inline-formula>0.2545;
<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.6956, <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.05. Indo-Pacific <inline-formula><mml:math display="inline"><mml:mrow><mml:mi>y</mml:mi><mml:mo>=</mml:mo><mml:mn>1.0212</mml:mn><mml:mo>×</mml:mo><mml:mo>+</mml:mo></mml:mrow></mml:math></inline-formula>0.3064;
<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.9327, <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.05. Florida (fossils) <inline-formula><mml:math display="inline"><mml:mrow><mml:mi>y</mml:mi><mml:mo>=</mml:mo><mml:mn>0.4961</mml:mn><mml:mo>×</mml:mo><mml:mo>+</mml:mo></mml:mrow></mml:math></inline-formula>0.1648;
<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.3171, <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.05. <bold>(c)</bold> Western Atlantic <inline-formula><mml:math display="inline"><mml:mrow><mml:mi>y</mml:mi><mml:mo>=</mml:mo><mml:mn>0.1428</mml:mn><mml:mo>×</mml:mo><mml:mo>+</mml:mo></mml:mrow></mml:math></inline-formula>0.868;
<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.0084, <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &gt; 0.05. Indo-Pacific <inline-formula><mml:math display="inline"><mml:mrow><mml:mi>y</mml:mi><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mn>1.7219</mml:mn><mml:mo>×</mml:mo><mml:mo>+</mml:mo></mml:mrow></mml:math></inline-formula>3.9122;
<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.3204, <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.05. Florida (fossils) <inline-formula><mml:math display="inline"><mml:mrow><mml:mi>y</mml:mi><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mn>0.0779</mml:mn><mml:mo>×</mml:mo><mml:mo>+</mml:mo></mml:mrow></mml:math></inline-formula>0.4058;
<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.0233, <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &gt; 0.05. <bold>(d)</bold> Western Atlantic <inline-formula><mml:math display="inline"><mml:mrow><mml:mi>y</mml:mi><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mn>0.3747</mml:mn><mml:msup><mml:mi>x</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mn>20.525</mml:mn><mml:mo>×</mml:mo><mml:mo>-</mml:mo><mml:mn>280.21</mml:mn></mml:mrow></mml:math></inline-formula>;
<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.3524; <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.05 and <inline-formula><mml:math display="inline"><mml:mrow><mml:mi>y</mml:mi><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mn>0.0104</mml:mn><mml:mo>×</mml:mo><mml:mo>+</mml:mo></mml:mrow></mml:math></inline-formula>0.9913; <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.0006;
<inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &gt; 0.05. Indo-Pacific <inline-formula><mml:math display="inline"><mml:mrow><mml:mi>y</mml:mi><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mn>0.0203</mml:mn><mml:msup><mml:mi>x</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mn>.3294</mml:mn><mml:mo>×</mml:mo><mml:mo>-</mml:mo><mml:mn>19.628</mml:mn></mml:mrow></mml:math></inline-formula>; <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.7519;
<inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.05 and <inline-formula><mml:math display="inline"><mml:mrow><mml:mi>y</mml:mi><mml:mo>=</mml:mo><mml:mn>0.2472</mml:mn><mml:mo>×</mml:mo><mml:mo>-</mml:mo><mml:mn>5.282</mml:mn></mml:mrow></mml:math></inline-formula>; <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.7376; <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.05. <bold>(e)</bold> Western Atlantic <inline-formula><mml:math display="inline"><mml:mrow><mml:mi>y</mml:mi><mml:mo>=</mml:mo><mml:mn>0.1588</mml:mn><mml:msup><mml:mi>x</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>-</mml:mo><mml:mn mathvariant="normal">8</mml:mn><mml:mo>,</mml:mo><mml:mn>7235</mml:mn><mml:mi>x</mml:mi><mml:mo>×</mml:mo><mml:mo>+</mml:mo><mml:mn>121.16</mml:mn></mml:mrow></mml:math></inline-formula>;
<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0.1128; <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &gt; 0.05 and <inline-formula><mml:math display="inline"><mml:mrow><mml:mi>y</mml:mi><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mn>0.0193</mml:mn><mml:mo>×</mml:mo><mml:mo>+</mml:mo></mml:mrow></mml:math></inline-formula>1.9758; <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.0036; <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &gt; 0.05.
Indo-Pacific <inline-formula><mml:math display="inline"><mml:mrow><mml:mi>y</mml:mi><mml:mo>=</mml:mo><mml:mn>0.0206</mml:mn><mml:msup><mml:mi>x</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>-</mml:mo><mml:mn>1.1664</mml:mn><mml:mo>×</mml:mo><mml:mo>+</mml:mo></mml:mrow></mml:math></inline-formula>17.691; <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.5101; <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.05 and <inline-formula><mml:math display="inline"><mml:mrow><mml:mi>y</mml:mi><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mn>0.0613</mml:mn><mml:mo>×</mml:mo><mml:mo>+</mml:mo><mml:mn>2.9539</mml:mn></mml:mrow></mml:math></inline-formula>;
<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.3885; <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.05. <bold>(f)</bold> Western
Atlantic <inline-formula><mml:math display="inline"><mml:mrow><mml:mi>y</mml:mi><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mn>0.4333</mml:mn><mml:msup><mml:mi>x</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mn>23.722</mml:mn><mml:mo>×</mml:mo><mml:mo>-</mml:mo><mml:mn>323.44</mml:mn></mml:mrow></mml:math></inline-formula>; <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.2699; <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.05 and <inline-formula><mml:math display="inline"><mml:mrow><mml:mi>y</mml:mi><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mn>0.0282</mml:mn><mml:mo>×</mml:mo><mml:mo>+</mml:mo><mml:mn>1.7778</mml:mn></mml:mrow></mml:math></inline-formula>;
<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.0025; <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &gt; 0.05.
Indo-Pacific <inline-formula><mml:math display="inline"><mml:mrow><mml:mi>y</mml:mi><mml:mo>=</mml:mo><mml:mo>-</mml:mo><mml:mn>0.0223</mml:mn><mml:msup><mml:mi>x</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:mn>1.4534</mml:mn><mml:mo>×</mml:mo><mml:mo>-</mml:mo><mml:mn>21.144</mml:mn></mml:mrow></mml:math></inline-formula>; <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.7476; <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.05 and <inline-formula><mml:math display="inline"><mml:mrow><mml:mi>y</mml:mi><mml:mo>=</mml:mo><mml:mn>0.2566</mml:mn><mml:mo>×</mml:mo><mml:mo>-</mml:mo><mml:mn>5.1844</mml:mn></mml:mrow></mml:math></inline-formula>;
<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.7322; <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.05.</p></caption>
            <?xmltex \igopts{width=483.69685pt}?><graphic xlink:href="https://bg.copernicus.org/articles/13/4513/2016/bg-13-4513-2016-f08.png"/>

          </fig>

      <p>The recent data from the WA are from the four genera (listed according to
the number of data available) <italic>Orbicella, Porites, Diploria/Pseudodiploria</italic> and <italic>Solenastrea</italic>, and some of the discrepancy
between fossils and recent <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals, may therefore be an artifact of the
database. When compared on the taxonomical genus level, extension rates of
<italic>Porites</italic> (range <inline-formula><mml:math display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0.28 to 0.48, mean <inline-formula><mml:math display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0.37 <inline-formula><mml:math display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.07 cm yr<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> and
<italic>Diploria/Pesudodiploria</italic> (range <inline-formula><mml:math display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0.30 to 0.40, mean <inline-formula><mml:math display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0.35 <inline-formula><mml:math display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> 0.04 cm yr<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> are
significantly lower than those of <italic>Orbicella</italic> (range <inline-formula><mml:math display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0.38 to 1.44, mean <inline-formula><mml:math display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0.91 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.23 cm yr<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>,
<inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.05) but are identical with
regard to density (<italic>Porites</italic>: range <inline-formula><mml:math display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 1.10 to 1.72, mean <inline-formula><mml:math display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 1.44 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.20 g cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>; <italic>Diploria/Pseudodiploria</italic>:
range <inline-formula><mml:math display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0.97 to 1.70; mean <inline-formula><mml:math display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 1.27 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.31 g cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>; <italic>Orbicella</italic>: range <inline-formula><mml:math display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0.78 to 1.94,
mean <inline-formula><mml:math display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 1.37 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.24 g cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>; <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &gt; 0.05). <italic>Orbicella</italic> display a negative relationship
between extension rate and bulk density (<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.27, <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.05),
whereas no such relationship has been documented for <italic>Porites</italic> (<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.30, <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &gt; 0.05) and
<italic>Diploria</italic>/<italic>Pseudodiploria</italic> (<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.11, <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &gt; 0.05) which are
indistinguishable in their calcification data (Fig. 7). Remarkably,
<italic>Porites</italic> and <italic>Diploria</italic>/<italic>Pseudodiploria</italic> are indistinguishable not only with regard to their general
calcification relationship but also quantitatively in terms of absolute
values and clearly differ from those of <italic>Orbicella</italic>, whose calcification rates are
significantly higher at almost any given density (Fig. 7). <italic>Solenastrea</italic> is unusual due
to its low extension rates (range <inline-formula><mml:math display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0.22 to 0.58, mean <inline-formula><mml:math display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0.43 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.19 cm yr<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> and low bulk density (range <inline-formula><mml:math display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0.55 to 1.22, mean
<inline-formula><mml:math display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0.88 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.22 g cm<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>. Like <italic>Orbicella</italic>, extension rate and bulk
density display a significant negative relationship (<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.23, <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.05), whereas extension rate is positively correlated with
calcification rate (<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.47, <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.05). Bulk density, on
the other hand, displays no correlation with calcification rate (<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.06, <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &gt; 0.05).</p>
      <p>For the relationships described above, we find no consistent patterns of the
parameters of calcification between recent and fossil specimens and between
taxa. While the data from the recent <italic>Solenastrea</italic> specimen are similar to the data from
fossil <italic>Solenastrea</italic> (Fig. 7), the single fossil <italic>Porites</italic> available is incompatible with recent
<italic>Porites</italic> from the WA, both in terms of extension rate and bulk density, but plots
together with fossil <italic>Solenastrea</italic> (Fig. 7). Also, the Pliocene <italic>Diploria/Pseudodiploria</italic> (only extension rates
available from literature data) clearly differ from their recent
counterparts with significantly higher extension rates (Fig. 7). With regard
to <italic>Orbicella</italic>, bulk density of the two fossil specimens available is lower at any
given extension rate than in the recent <italic>Orbicella</italic>, but consistent with fossil
<italic>Solenastrea</italic> (Fig. 7). In extension rate vs. bulk density space, we observe a duality
between recent and fossil <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals, rather than any taxonomical distinction.
With regard to calcification rates, fossils also have lower values at any
given extension rate than recent <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals (Fig. 7). On the other hand, no
clear separation exists between fossils and recent <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals with regard to
bulk density vs. calcification rate (Fig. 7).</p>
</sec>
<sec id="Ch1.S2.SS6.SSS2">
  <title>Indo-Pacific</title>
      <p>Extension rates of recent <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals documented by our literature review for
the WA (various taxa) and IP (<italic>Porites</italic> only) have a broad range of values from 0.28
to 2.38 cm yr<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, however, <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals of the WA have significantly lower
mean extension rates (0.28 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 1.44, mean: 0.79 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.31 cm yr<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> than those of the IP (0.30 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 2.38,
mean: 1.28 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.50 cm yr<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.05; Table 3). Fossil corals have lower
values than the recent corals (0.16–0.89, mean: 0.45 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.20 cm yr<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.05), including those from the WA, and some
of the fossils have the smallest values recorded (Fig. 8a). With regard to
density, there is a broad range of values; however, no significant
difference exists among the WA (0.78–1.94, mean: 1.37 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.24 g cm<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> and IP <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals
(1.01–1.90, mean: 1.30 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.16 g cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &gt; 0.05), although the range of values is
larger in the IP. Fossil corals have a similar range but clearly have
significantly lower bulk density than the recent corals (<inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.05)
and also have the lowest minimum values of bulk density recorded (0.55–1.22, mean: 0.86 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.22 g cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>; Table 2). The recent
<inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals of the WA and IP show significant negative correlations between
extension rate and density with an identical slope (<inline-formula><mml:math display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula> test; <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 
0.05) and intercept. While the correlation in the IP <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> coral data is highly
significant (<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.52, <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.05), it is weaker but still
significant in the WA data (<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.14, <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.05; Fig. 8a). The
fossil reef corals show a significant negative relationship between
extension rate and bulk density defined by linear regression as well, but
the slope is steeper (<inline-formula><mml:math display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula> test; <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &gt; 0.05) than in the recent corals
(<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.43, <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.05; Fig. 8a).</p>
      <p>Calcification rates of <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals have a large range of values from 0.18 to
2.82 g cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> yr<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> (Table 2). In recent and fossil <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals, there is
a significant positive correlation between extension and calcification rate
(<inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.05). In recent WA corals, calcification rates (0.31–1.78,
mean: 1.06 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.38 g cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> yr<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> remain clearly below
those of the IP (0.56–2.82, mean: 1.67 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.49 cm<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> yr<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> because of higher extension rates. Importantly, the slope of the
relationship is identical (<inline-formula><mml:math display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula> test; <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.05) in the WA and IP and
the relationships are highly significant (<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.93 and 0.70, <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.05, respectively), whereas the slope of the relationship is
smaller by <inline-formula><mml:math display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 50 % (<inline-formula><mml:math display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula> test; <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &gt; 0.05) in the
fossil corals (Fig. 8b). No such simple relationships exist between density
and calcification rate. In the IP, there is a significant negative relation
between density and calcification (<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.32, <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.05),
whereas in the WA, there is no relationship (<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.00, <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &gt; 0.05; Fig. 8c). Therefore, variations in calcification rates in the latter
region are entirely driven by changes in extension rates, whereas in the IP,
it is driven by both extension rates and bulk density, and decreasing
density weakens the effect of increased extension on calcification. In the
data from the Florida fossils no relationship of density was found with
calcification rate (<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.02, <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &gt; 0.05) which means that
changes of calcification rate fully depend on variable extension and the
pattern in essence resembles that of the WA (Fig. 8b, c).</p>
      <p>Importantly, the recent <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals from the WA display significantly lower
values and a smaller range of values of all three calcification parameters
(extension rate, bulk density, calcification rate) compared to the <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals
from the IP (Fig. 8d–f, Table 2). This corresponds with different temperature
windows of <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> coral distribution in the database. The WA corals in the
database cover a rather small range of average annual temperatures between
26.4 and 28.6 <inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C, whereas the IP <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals represent the spectrum
of average annual water temperature between 23.0 and 29.6 <inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C.
Within these two temperature windows, differences between the WA and IP
corals also pertain to patterns: In the IP, extension rates show a marked
increase but bulk density decreases which combines to present a positive
relationship of calcification rate with temperature. No such relationship
exists in the WA corals (Fig. 8). Because of the established non-linearity
of life processes in poikilothermic biota alike the reef corals (Goreau
and Macfarlane, 1990; Grizzle et al., 2001; Townsend et al., 2008) linear
regression is likely inappropriate for describing the statistics of
calcification within the temperature windows documented by the data and
beyond (Fig. 8d–f) and we have alternatively applied a quadratic function to
the data. With respect to the WA data, this procedure results in an inverted
parabolic relationship of extension rate with temperature (<inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.05). Corresponding parabolic regressions for density and calcification
rate are not significant (<inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &gt; 0.05), and may be an effect of
rather poor resolution of the temperature data in the database. The
relationship is, however, consistent with calcification data from regional
studies (Carricart-Ganivet, 2004; Carricart-Ganivet et al., 2012), but on
a large scale.</p>
</sec>
</sec>
</sec>
<sec id="Ch1.S3">
  <title>Lessons from the recent analogue</title>
      <p>The relationship of extension rate with density (slope and intercept of the regression) is identical in the WA and IP corals, although maximum extension rates tend to be in the IP (Fig. 8). Recent <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals from the
WA display enhanced variability of bulk density associated with low
extension rates, which results from the noisy inputs of
<italic>Diploria</italic>/<italic>Pseudodiploria</italic> and <italic>Porites</italic>, whereas <italic>Orbicella</italic> having higher extension rates forms a consistent population like <italic>Porites</italic> in
the IP (Figs. 7, 8).
It should be noted that the slope of linear regression is steeper in
WA-<italic>Orbicella</italic> than IP-<italic>Porites</italic> according to an <inline-formula><mml:math display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula> test (<inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.05; Figs. 5, 7a). In
contrast, the Florida fossil <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals have significantly lower extension
rates and mean bulk densities than all of their recent counterparts, and
also have an extension rate/density relationship which differs from that
of all recent <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals in the database (<inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.05; Fig. 6).</p>
      <p>With regard to calcification rates, all recent corals display an identical
relationship between extension rate and calcification, irrespective of taxon
or provenance, and this relationship is significantly different from that of
the fossils (<inline-formula><mml:math display="inline"><mml:mi>f</mml:mi></mml:math></inline-formula> test <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.05; Fig. 8b). The relationships of bulk
density with calcification rate, however, significantly differ in the
populations from the recent WA, the IP, and the Plio-Pleistocene of Florida,
respectively (Fig. 8c).</p>
      <p>From this discussion we conclude that recent and fossil <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals clearly
differ with regard to their relationships of extension rate with bulk
density and that taxonomical peculiarities seem not to play a significant
role for the big picture (Figs. 7, 8a). We further conclude that the
relationship of extension rate with calcification rate is identical in
recent <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals from all ocean regions, but is significantly different
between recent and fossil <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals (Fig. 7b). Bulk density and calcification
rate, on the other hand, display individual traits among the recent <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals
from the WA, the IP and the Plio-Pleistocene of Florida (Fig. 8c).</p><?xmltex \hack{\newpage}?>
<sec id="Ch1.S3.SS1">
  <title>Low calcification rates due to high nutrients or low aragonite saturation?</title>
      <p><inline-formula><mml:math display="inline"><mml:mi>Z</mml:mi></mml:math></inline-formula> coral skeletal calcification is closely linked with the saturation state
of seawater with respect to aragonite, and low degrees of supersaturation have been demonstrated to cause low calcification rates (Cohen and Holcomb, 2009; Gattuso et al., 1998; Langdon et al., 2000). In the low latitudes, surface waters of upwelling regions have been shown to be low in <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Ω</mml:mi><mml:mtext>aragonite</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> (Furnas,
2011). Upwelling has been documented also for the Plio-Pleistocene interglacials of Florida
(Brachert et al., 2016), and <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> coral skeletons recording
maximum upwelling according to their stable isotope composition, have the
smallest density values but largest values of extension rate
(Brachert et al., 2016). This conforms with findings from the
Galapagos upwelling system, were <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> coral skeletal density is reduced under
maximum upwelling stresses, but extension rate is higher than predicted from
the ambient SST (Manzello et al., 2014). The low volumes of cements in intra-skeletal porosity of
the corals and the low degree of cementation of the Plio-Pleistocene shallow-marine
carbonates may reflect the effects of phosphate poisoning to carbonate
precipitation in an upwelling regime
(Hallock and Schlager, 1986; Manzello et al.,
2014), but the benthic assemblages and low amounts of bioerosion do not
provide compelling evidence for high eutrophy. If anything, these findings
support intermittent upwelling inferred from stable isotope data which has positively interfered with <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> coral
calcification on the Florida platform during the Plio-Pleistocene, but
clearly documents minimal calcification rates to have coincided with
episodes with minimum upwelling (Brachert et al., 2016). Thus,
upwelling cannot be the prime reason for the observed low calcification
rates.</p>
      <p>Furthermore, the low extension rates of the Plio-Pleistocene <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals from
Florida are fully compatible with those published from fossil <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals at
various locations in the tropical WA (various taxa) which also range between
0.3 and 0.8 cm yr<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> during the Pliocene (Johnson and Pérez,
2006), <inline-formula><mml:math display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 0.3 cm yr<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in the late Miocene
(Denniston et al., 2008b) and 0.2 and 1.0 cm yr<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>
in the FRT during the late Pleistocene (0.13 Ma; Gischler et
al., 2009; Fig. 7g). For this reason, low extension rates recorded by the
Florida fossils are representative of the tropical WA at that time
and were as such a large-scale regional or perhaps even global phenomenon.
Reasons for globally low pH/low <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Ω</mml:mi><mml:mtext>aragonite</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> in ambient water may be sought
in high atmospheric <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula>CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> levels. However, for the last 3 Ma after the mid-Pliocene climatic optimum (<inline-formula><mml:math display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 3 Ma), reconstructed <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula>CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> was
near pre-industrial levels and only during and before the climatic optimum it
was at the levels predicted to exist by the end of this century (IPCC,
2013; Seki et al., 2010). For the long-term buffering effect of the ocean,
<inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Ω</mml:mi><mml:mtext>aragonite</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> has been suggested to have not been significantly
different from the present day during the Plio-Pleistocene interglacials,
however (Hönisch et al., 2012). On the
other hand, substantial <inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula>CO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> changes have been documented over the
glacial–interglacial cycles of the Quaternary
(Petit et al., 1999), concomitant with changes in
calcification of calcareous plankton (Barker and Elderfield, 2002;
Beaufort et al., 2011). Thus, low <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Ω</mml:mi><mml:mtext>aragonite</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> may represent a
potential driver of the observed low calcification rates.</p>
</sec>
<sec id="Ch1.S3.SS2">
  <title>Low calcification rates due to heat stress?</title>
      <p>Next to <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="normal">Ω</mml:mi><mml:mtext>aragonite</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>, temperature is an important control of
<inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> coral calcification in the world oceans. Given the simplification in our
reconstruction of SSTs discussed above, the extension rates still display a
negative correlation with the average annual SST (<inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.05) and bulk
density a positive relationship with SST (<inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.05). In contrast, no
clear relation has been found between SST and calcification rate (<inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &gt; 0.05), although visual inspection suggests an inverse
correlation (Fig. 8). This pattern is qualitatively rather consistent with
recent <italic>Orbicella</italic> (Carricart-Ganivet, 2004), however, at a substantially larger
temperature window in the fossil material and an absent relationship or
likely negative correlation of calcification rate with temperature (Fig. 6).</p>
      <p>Over the large temperature window of 6.9 <inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C covered by the modern
IP data, a pattern of changes driven by temperature has been documented
using linear regression (Fig. 8d–f). In contrast, the temperature range
documented by <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals from the WA database covers only 2.2 <inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C
(Fig. 8d–f) and calcification data do not display any linear relationship.
Instead of a linear fit, they can be approximated using a quadratic
polynomial which should suggest the present temperature window realised by
recent <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals of the WA to cover more or less the ecological spectrum of
this coral province. Low extension rates documented by fossil <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals from
Florida and many other locations of the Caribbean, therefore, potentially
document temperatures either near their lower or upper levels of ecological
tolerance. In our temperature reconstruction using skeletal <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn>18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O values, we apply a value of <inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn>18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mtext>water</mml:mtext></mml:msub></mml:math></inline-formula> which
likely underestimates the actual SST because other methods consistently
found SSTs of the WA warm pool <inline-formula><mml:math display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 2 <inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C above present
values during the last 5 Ma (Fedorov et al., 2013; O'Brien et al., 2014).
Low calcification rates in <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals may, therefore, reflect
warmer-than-present SSTs during the Plio-Pleistocene interglacials. Such an
interpretation is consistent with concepts of nonlinear calcification
responses to temperature in <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals (Brachert et al., 2013; Gischler et
al., 2009; Worum et al., 2007). Correspondingly, approaches describing coral
calcification within temperature windows of &lt; 1 <inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C of annual temperature would not describe <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> coral calcification
over the full spectrum of ecological tolerance of a given species and may
describe calcification near the optimum or lower and/or upper threshold of
calcification only. In application of this concept, <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> coral growth in the WA
was likely under significant heat stress, and annual water temperatures 2 <inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C higher than at present were causing calcification rates
50 % lower than present day. It should be noted also that upwelling has
been ascribed a mitigating effect on SST stresses depending on the depth of
upwelling or the timing during the year (Chollett et al., 2010;
Riegl and Piller, 2003) and maximum extension rates and/or minimum density of the
Florida <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals coincided with a maximum of upwelling. Intermittent
upwellings during the Plio-Pleistocene, therefore, seem to have created
temporary refuges for <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals by episodically mitigating heat stresses
(Brachert et al., 2016). This finding supports notions of hot
SSTs during the Eemian interglacial to have resulted in reef kills at
equatorial latitudes and poleward migrations of many <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> coral taxa
(Kiessling et al., 2012). Our data also suggest recent coral
reefs at equatorial latitudes to be potentially endangered from rising SSTs
with ongoing climate change and ocean acidification
(IPCC, 2013).</p>
</sec>
</sec>
<sec id="Ch1.S4" sec-type="conclusions">
  <title>Conclusions</title>
      <p><list list-type="bullet">
          <list-item>

      <p>This study presents quantitative records of calcification rates from
Pliocene and Pleistocene interglacial reef corals (<inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals).</p>
          </list-item>
          <list-item>

      <p><inline-formula><mml:math display="inline"><mml:mi>Z</mml:mi></mml:math></inline-formula> coral skeletons from Pliocene and Pleistocene precursors of the modern
Florida carbonate platform display pristine preservation of stable isotope
signatures and calcification data.</p>
          </list-item>
          <list-item>

      <p>Extension rates of Plio-Pleistocene specimens from Florida (various taxa)
are remarkably low, but compatible with those of other tropical Caribbean
settings at that time.</p>
          </list-item>
          <list-item>

      <p>Calcification data are undistinguishable among geological time slices
(interglacials), but bulk density and calcification rate of recent <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> corals
from Florida are remarkably high compared to the fossils.</p>
          </list-item>
          <list-item>

      <p>Average calcification rates of Pliocene and Pleistocene specimens,
irrespective of <inline-formula><mml:math display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> coral taxon, were only 50 % of the recent values in the
WA.</p>
          </list-item>
          <list-item>

      <p>The reasons behind low calcification rates during the Plio-Pleistocene
interglacials are not clear but a lower-than-recent saturation of seawater
with aragonite or high water temperatures near the limits of ecological
tolerance are likely candidates.</p>
          </list-item>
        </list></p>
</sec>

      
      </body>
    <back><notes notes-type="authorcontribution">

      <p>T. C. Brachert designed this research; field work was carried out by T. C. Brachert, M. Reuter and J. S. Klaus.
Laboratory analyses were performed by T. C. Brachert, S. Krüger and M. Reuter. K. Helmle provided
calcification records from a recent <italic>Solenastrea</italic> from Florida Bay. T. C. Brachert, M. Reuter and J. M. Lough wrote
the paper.</p>
  </notes><ack><title>Acknowledgements</title><p>Eduard Petuch (Florida Atlantic University, USA) provided some of the
samples needed for this study. Kurt Schubert carefully prepared the coral
slices and Jörg Lenzner made the SEM micrographs (both University of
Leipzig, Germany). Adrian Immenhauser (University of Bochum, Germany) made
valuable comments to an earlier manuscript and Christine Perrin (CNRS
Moulis, France) is thanked for her suggestions on issues of skeletal
alteration and preservation. We also thank the reviewers of the journal for their continual support and helpful suggestions. Funding by the Deutsche Forschungsgemeinschaft
is gratefully acknowledged (BR 1153/13-1).
<?xmltex \hack{\newline}?><?xmltex \hack{\newline}?>
Edited by: T. Treude <?xmltex \hack{\newline}?>
Reviewed by: J. P. Carricart-Ganivet and two anonymous referees</p></ack><ref-list>
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    <!--<article-title-html>Low Florida coral calcification rates in the Plio-Pleistocene</article-title-html>
<abstract-html><p class="p">In geological outcrops and drill cores from reef frameworks, the skeletons
of scleractinian corals are usually leached and more or less completely
transformed into sparry calcite because the highly porous skeletons formed
of metastable aragonite (CaCO<sub>3</sub>) undergo rapid diagenetic alteration.
Upon alteration, ghost structures of the distinct annual growth bands
often allow for reconstructions of annual extension ( =  growth) rates, but
information on skeletal density needed for reconstructions of calcification
rates is invariably lost. This report presents the bulk
density, extension rates and calcification rates of fossil reef corals which
underwent minor diagenetic alteration only. The corals derive from
unlithified shallow water carbonates of the Florida platform (south-eastern
USA), which formed during four interglacial sea level highstands dated
approximately 3.2, 2.9, 1.8, and 1.2 Ma in the mid-Pliocene to early
Pleistocene. With regard to the preservation, the coral skeletons display
smooth growth surfaces with minor volumes of marine aragonite cement within
intra-skeletal porosity. Within the skeletal structures, voids are commonly
present along centres of calcification which lack secondary cements. Mean
extension rates were 0.44 ± 0.19 cm yr<sup>−1</sup> (range 0.16 to
0.86 cm yr<sup>−1</sup>), mean bulk density was 0.96 ± 0.36 g cm<sup>−3</sup> (range 0.55 to 1.83 g cm<sup>−3</sup>) and calcification rates ranged
from 0.18 to 0.82 g cm<sup>−2</sup> yr<sup>−1</sup> (mean 0.38 ± 0.16 g cm<sup>−2</sup> yr<sup>−1</sup>), values which are 50 % of modern shallow-water reef
corals. To understand the possible mechanisms behind these low calcification
rates, we compared the fossil calcification rates with those of modern
zooxanthellate corals (<i>z</i> corals) from the Western Atlantic (WA) and
Indo-Pacific calibrated against sea surface temperature (SST). In the fossil
data, we found a widely analogous relationship with SST in <i>z</i> corals from the
WA, i.e. density increases and extension rate decreases with increasing SST,
but over a significantly larger temperature window during the
Plio-Pleistocene. With regard to the environment of coral growth, stable
isotope proxy data from the fossil corals and the overall structure of the
ancient shallow marine communities are consistent with a well-mixed, open
marine environment similar to the present-day Florida Reef Tract, but
variably affected by intermittent upwelling. Upwelling along the platform
may explain low rates of reef coral calcification and inorganic cementation,
but is too localised to account also for low extension rates of Pliocene
<i>z</i> corals throughout the tropical WA region. Low aragonite
saturation on a more global scale in response to rapid glacial–interglacial
CO<sub>2</sub> cyclicity is also a potential factor, but Plio-Pleistocene
atmospheric <i>p</i>CO<sub>2</sub> is generally believed to have been broadly similar to the
present day. Heat stress related to globally high interglacial SST only
episodically moderated by intermittent upwelling affecting the Florida
platform seems to be another likely reason for low calcification rates. From
these observations we suggest some present coral reef systems to be
endangered from future ocean warming.</p></abstract-html>
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