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  <front>
    <journal-meta><journal-id journal-id-type="publisher">BG</journal-id><journal-title-group>
    <journal-title>Biogeosciences</journal-title>
    <abbrev-journal-title abbrev-type="publisher">BG</abbrev-journal-title><abbrev-journal-title abbrev-type="nlm-ta">Biogeosciences</abbrev-journal-title>
  </journal-title-group><issn pub-type="epub">1726-4189</issn><publisher>
    <publisher-name>Copernicus Publications</publisher-name>
    <publisher-loc>Göttingen, Germany</publisher-loc>
  </publisher></journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.5194/bg-13-4533-2016</article-id><title-group><article-title>Marine regime shifts in ocean biogeochemical models: <?xmltex \hack{\newline}?>a case study in the
Gulf of Alaska</article-title>
      </title-group><?xmltex \runningtitle{Marine regime shifts in ocean biogeochemical models}?><?xmltex \runningauthor{C. Beaulieu et al.}?>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1">
          <name><surname>Beaulieu</surname><given-names>Claudie</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1 aff6">
          <name><surname>Cole</surname><given-names>Harriet</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Henson</surname><given-names>Stephanie</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-3875-6802</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Yool</surname><given-names>Andrew</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-9879-2776</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Anderson</surname><given-names>Tom Anderson</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>de Mora</surname><given-names>Lee</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-5080-3149</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff4">
          <name><surname>Buitenhuis</surname><given-names>Erik T.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-6274-5583</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Butenschön</surname><given-names>Momme</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-4592-9927</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff5">
          <name><surname>Totterdell</surname><given-names>Ian J.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Allen</surname><given-names>J. Icarus</given-names></name>
          
        </contrib>
        <aff id="aff1"><label>1</label><institution>Ocean and Earth Science, University of Southampton,
Southampton, UK</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>National Oceanography Centre, Southampton,
UK</institution>
        </aff>
        <aff id="aff3"><label>3</label><institution>Plymouth Marine Laboratory, Plymouth, UK</institution>
        </aff>
        <aff id="aff4"><label>4</label><institution>Tyndall Centre for Climate Change research, School of
Environmental Sciences, University of East Anglia, <?xmltex \hack{\newline}?>Norwich,
UK</institution>
        </aff>
        <aff id="aff5"><label>5</label><institution>Hadley Centre, Met Office, Exeter, UK</institution>
        </aff>
        <aff id="aff6"><label>a</label><institution>now at: MSS Marine Laboratory, Marine Scotland Science,
Aberdeen, UK</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">C. Beaulieu (c.beaulieu@soton.ac.uk)</corresp></author-notes><pub-date><day>12</day><month>August</month><year>2016</year></pub-date>
      
      <volume>13</volume>
      <issue>15</issue>
      <fpage>4533</fpage><lpage>4553</lpage>
      <history>
        <date date-type="received"><day>23</day><month>June</month><year>2015</year></date>
           <date date-type="rev-request"><day>26</day><month>August</month><year>2015</year></date>
           <date date-type="rev-recd"><day>23</day><month>March</month><year>2016</year></date>
           <date date-type="accepted"><day>14</day><month>June</month><year>2016</year></date>
      </history>
      <permissions>
        
        
      <license license-type="open-access"><license-p>This work is licensed under the Creative Commons Attribution 3.0 Unported License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/3.0/">https://creativecommons.org/licenses/by/3.0/</ext-link></license-p></license></permissions><self-uri xlink:href="https://bg.copernicus.org/articles/.html">This article is available from https://bg.copernicus.org/articles/.html</self-uri><self-uri xlink:href="https://bg.copernicus.org/articles/.pdf">The full text article is available as a PDF file from https://bg.copernicus.org/articles/.pdf</self-uri>
      <abstract>
    <p id="d1e200">Regime shifts have been reported in many marine ecosystems, and are often
expressed as an abrupt change occurring in multiple physical and biological
components of the system. In the Gulf of Alaska, a regime shift in the late
1970s was observed, indicated by an abrupt increase in sea surface
temperature and major shifts in the catch of many fish species. A thorough
understanding of the extent and mechanisms leading to such regime shifts is
challenged by data paucity in time and space. We investigate the ability of
a suite of ocean biogeochemistry models of varying complexity to simulate
regime shifts in the Gulf of Alaska by examining the presence of abrupt
changes in time series of physical variables (sea surface temperature and
mixed-layer depth), nutrients and biological variables (chlorophyll, primary
productivity and plankton biomass) using change-point analysis. Our results
show that some ocean biogeochemical models are capable of simulating the
late 1970s shift, manifested as an abrupt increase in sea surface
temperature followed by an abrupt decrease in nutrients and biological
productivity. Models from low to intermediate complexity simulate an abrupt
transition in the late 1970s (i.e. a significant shift from one year to the
next) while the transition is smoother in higher complexity models. Our
study demonstrates that ocean biogeochemical models can successfully
simulate regime shifts in the Gulf of Alaska region. These models can
therefore be considered useful tools to enhance our understanding of how
changes in physical conditions are propagated from lower to upper trophic
levels.</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <title>Introduction</title>
      <p id="d1e210">Although there is no universal definition of a marine regime shift, they are
typically described as an abrupt change in the ecosystem from one state to
another, which is detectable in multiple physical and biological components
of the system (Lees et al., 2006; Daskalov et al.,  2007; deYoung et al., 2008;
Andersen et al., 2009; Schwing,  2009). Generally, the magnitude of the regime
shift is large and it occurs rapidly relative to the time spent in the
different states (e.g. a shift from one year to the next that persists on
decadal or longer timescales). The regime shift can be a linear response to
an abrupt change in forcing (e.g. climate shift), a nonlinear response to a
small change in forcing or driven by the internal dynamics of the system
(Andersen et al., 2009; Bestelmeyer et al., 2011), but the exact mechanisms
are often unknown.</p>
      <p id="d1e213">Key drivers of marine regime shifts include changes in ecosystem habitat,
biotic processes such as dynamics of the foodweb and abiotic processes such
as changes in physical and chemical conditions (deYoung et al., 2008). These
drivers can be natural or anthropogenic, or a combined influence, which can
increase the vulnerability of ecosystems (e.g. an ecosystem which has less
resilience due to increasing human pressure tends to respond differently to
an ecosystem subject only to natural disturbances; Folke  et al., 2004).
Excessive fishing is an example of an anthropogenic biotic driver where a
decrease in top predators (top-down control) can cause a trophic cascade,
resulting in a new bottom-up controlled state (Daskalov  et al., 2007). Abiotic
factors such as climate change or ocean and atmosphere oscillations may
initiate bottom-up regime shifts in the food web via changes affecting the
abundance of phytoplankton or zooplankton (Cury and Shannon, 2004).
Typically, bottom-up driven shifts in biological components of the ecosystem
generated by climate shifts manifested in changes in sea surface temperature
or mixed-layer depth are considered the most easily identified (deYoung  et
al., 2008) and are the focus of this study.</p>
      <p id="d1e216">Temporal and spatial scales of regime shifts may also affect their
detectability (e.g. from a small scale coral reef regime shift occurring
within a single year to a North Pacific-wide ecosystem regime shift taking
a few years to transition; Drinkwater, 2006; deYoung et al., 2008). Hence,
detection of a shift in a large complex marine ecosystem such as the North
Pacific or North Atlantic, in which there may be lags between the expression
of the shift in the abiotic and biotic components of the system, may be more
difficult than detecting a regime shift in a small coral reef (deYoung  et
al., 2008).</p>
      <p id="d1e219">Regime shifts associated with changes in physical conditions have been
previously reported in the North Atlantic (Drinkwater, 2006; Beaugrand et
al., 2009; Alheit et al., 2014), North Sea (Reid et al., 2001; Beaugrand,
2004; McQuatters-Gollop et al., 2007) and North Pacific (Polovina et al.,
1995; Mantua et al., 1997; Hare and Mantua, 2000; Litzow and Mueter, 2014),
among others. The late 1970s North Pacific regime shift has been
comprehensively studied (Mantua et al., 1997; McGowan et al., 1998; Francis et
al., 1998; Hare and Mantua, 2000; Yatsu et al., 2008). It was observed in a
composite time series of 100 physical and biological variables, which
revealed an abrupt and sustained change during 1976/77 (Hare and Mantua,
2000). At that time, there was a deepening of the Aleutian low-pressure
system which doubled the eastward wind stress and brought cooler winds over
the central North Pacific, causing a drop in sea surface temperature (SST)
and a deepening of the mixed-layer depth (MLD). This resulted in moister and
warmer air settling over the California Current region and the Gulf of
Alaska, which caused an increase in SST in these two regions (Mantua et al.,
1997). This mechanism has been described as the Pacific Decadal Oscillation
(PDO), which switched from a negative to a positive state in 1976/77 (Mantua
et al., 1997). The late 1970s shift is thereby implicitly related to El
Niño Southern Oscillation (ENSO) variability, whose shorter timescale
fluctuations combined with random atmospheric forcing enforce decadal
variability in the PDO (Newman et al., 2003). Alternatively, other
large-scale climate patterns such as the North Pacific Gyre Oscillation
(NPGO) may impact on marine ecosystem dynamics. Concurrent with the switch
in the PDO state, an increase in zooplankton biomass was observed in the
Gulf of Alaska between the periods of 1956–1962 and 1980–1989 (Brodeur and
Ware, 1992). In upper trophic levels, abrupt increases in groundfish
recruitment and salmon catches were observed, while some forage fish
populations collapsed with consequences for piscivorous sea birds and marine
mammal populations (Anderson and Piatt, 1999). Overall the yield of fish
stocks in the Gulf of Alaska increased from the 1970s to the 1990s (McGowan
et al., 1998).</p>
      <p id="d1e223">Although a climate shift occurred over the entire North Pacific, the
ecological response varied between regions depending on their respective
dominant processes (Schwing, 2009). For example, in the California Current
region the ecological changes associated with the 1977 climate shift were
different from those that occurred in the Gulf of Alaska with lower salmon
catches after 1977 (Mantua et al., 1997). Investigation of the magnitude and
extent of the regime shift and the proposed mechanism is challenged by the
paucity of data covering adequate time and space scales in the Gulf of
Alaska. Most support for the observed biological changes comes from
fisheries stock assessments, which are not designed to study how climate
shifts are affecting marine ecosystems (McGowan  et al., 1998). A few
modelling studies have attempted to simulate the chain of events for the
late 1970s shift, but the direction of changes in the simulations of the
physical and biological parameters are sometimes opposite, and also vary
according to the space/timescale of the study (e.g. Polovina et al., 1995;
Haigh et al., 2001; Capotondi et al., 2005; Alexander et al., 2008). By
using the late 1970s regime shifts in the Gulf of Alaska as a case study we
aim to assess the ability of five global ocean biogeochemical models to
simulate this shift. The models were part of the UK Integrated Global
Biogeochemical Modelling Network (iMarNet) intercomparison, which aimed to
evaluate the models' ability to simulate global-scale bulk biogeochemical
properties using the same ocean general circulation model and atmospheric
forcing (Kwiatkowski  et al., 2014). These physically identical hindcast
simulations allow any model differences to be ascribed only to their
representation of biogeochemical processes, thereby providing insight into
the mechanisms leading to marine regime shifts.</p>
      <p id="d1e226">A substantial part of the literature on regime shifts uses principal
component analysis to compress a large number of time series representing
the state of the ecosystem to a smaller number of uncorrelated ones, which
indicates to what extent the different components of the system are
responding coherently. For example, Hare and Mantua (2000) reduced a total
of 100 time series of physical and biological variables representing the
state of the North Pacific to two leading modes of variability. The presence
of regime shifts in the reduced set of time series may render the presence
of shifts more evident to visual inspection, but this is often done without
further significance testing (Andersen et al., 2009). In order to
objectively identify the timing of a shift and distinguish it from a random
fluctuation, change-point techniques can be used, especially methods
designed to detect multiple shifts in the mean of a time series (e.g.
Andersen  et al., 2009). For example, the shift detection methodology proposed
by Rodionov (2004) consists of applying a t-test successively to compare the
means of two segments of a time series, considering all possible timings for
a shift, and repeats this until all shifts have been detected. This method
has been applied widely in the marine regime shift literature (e.g.
Daskalov  et al., 2007; DeYoung  et al., 2008; Overland  et al., 2008, 2010; Yatsu  et
al., 2008; Möllmann  et al., 2009). However, it is
not designed to distinguish a shift from a trend, which may lead to the
detection of a series of spurious shifts in the presence of a background
long-term trend (e.g.  Spencer  et al., 2011). Furthermore, it may lead to the
detection of spurious shifts in the presence of red noise, which creates
patterns that may be interpreted as shifts, but which are purely random
(e.g. Wunsch, 1999; Rudnick and Davis, 2003). Red noise is often present in biological time series
such as chlorophyll (e.g. Beaulieu  et al., 2013) or plankton abundance (e.g.
Di Lorenzo and Ohman, 2013), and manifests through a slow integrated
response to random weather forcings (Di Lorenzo and Ohman, 2013). Therefore,
we opt for a methodology capable of separating a long-term trend from an
abrupt change signal (e.g. which occurs from one year to the next) and
distinguishing these signals from red noise (Beaulieu  et al., 2012). In order
to provide further insights as to whether the shifts detected are a linear
response to a shift in the forcing itself (e.g. climate shift) from shifts
generated through a nonlinear response of some change in the forcing, also
called thresholds or “tipping points” (Scheffer  et al., 2009), the
relationship between the forcing and the response was explored using
regression models (Bestelmeyer  et al., 2011).</p>
      <p id="d1e229">Our analysis is organized as follows. First, we investigate whether shifts
are present in the Gulf of Alaska as predicted in a multiple model
intercomparison hindcast experiment, iMarNet (Kwiatkowski  et al.,  2014;
<uri>www.imarnet.org</uri>). Specifically, we analyse model physical and
biological variables for regime shifts and verify whether these shifts are
internally coherent. Then, we investigate the contribution of the different
physical and biological variables to the observed late 1970s and late 1980s
shifts in the Gulf of Alaska and the type of forcing–response relationship
that led to abrupt changes.</p>
</sec>
<sec id="Ch1.S2">
  <title>Methodology</title>
<sec id="Ch1.S2.SS1">
  <title>Ocean biogeochemical models</title>
      <p id="d1e246">This study uses ocean biogeochemistry model (OBGC) outputs from the iMarNet
intercomparison project. The primary aim of iMarNet was to investigate the
model complexity required to adequately represent marine ecosystems
(Kwiatkowski et al., 2014). The participating models were HadOCC (Palmer and
Totterdell, 2001), Diat-HadOCC (Halloran et al., 2010), MEDUSA-2 (Yool  et
al., 2011, 2013), PlankTOM10 (Le Quéré  et al., 2005) and ERSEM
(Baretta  et al., 1995; Blackford  et al., 2004). These models cover a large
span of model complexity from 7 state variables (including 2 plankton
functional types; PFTs) in HadOCC through to 57 state variables (including 8
PFTs) in ERSEM. The hindcast simulations (covering the period 1957 to 2007)
from each of the models were used in this study.</p>
      <p id="d1e249">The key focus of the iMarNet intercomparison was to evaluate the models'
ability to simulate global-scale bulk properties, such as carbon and
nutrient cycles, as a representation of marine biotic activity (Kwiatkowski  et
al.,  2014). The different OBGC models were implemented within a common
physical framework to eliminate confounding differences due to the physics
that would otherwise occur if different physical models were involved. This
framework used the Nucleus for European Modelling of the Ocean (NEMO)
physical ocean general circulation model (Madec, 2008) coupled to the Los
Alamos sea-ice model (CICE; Hunke and Lipscomb, 2008), with surface
atmospheric forcing drawn from the common ocean-ice reference experiment
(CORE2; Large and Yeager, 2009). The model grid was configured at
approximately 1<inline-formula><mml:math id="M1" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> horizontal resolution, with 75 vertical
levels increasing in thickness from 1m at the surface to 200 at 6000 m
depth.</p>
      <p id="d1e261">The models were initialized from an identical physical state in 1890 using
the same 3-D biogeochemical tracer fields (although not all of these tracers
were used in every model). Macronutrients (nitrate, phosphorus, silicic
acid) and dissolved oxygen initial condition fields were drawn from the
World Ocean Atlas 2009 (Garcia  et al., 2010a, b), while fields of
dissolved inorganic carbon and alkalinity were drawn from the Global Ocean
Data Analysis Project (GLODAP) database (Key  et al., 2004). Each model used
its own source for iron fields as currently there is no comprehensive global
dataset available. The remaining fields such as plankton and particulate and
dissolved organic matter were initialized with arbitrary small initial
conditions. Below is a brief description of the structure of each OBGC
model, which is also summarized in Table 1. Additional details can be found
in Kwiatkowski  et al. (2014).</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T1" specific-use="star"><caption><p id="d1e267">Nutrient cycles and Plankton Functional Types represented
in each model.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="7">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:colspec colnum="6" colname="col6" align="right"/>
     <oasis:colspec colnum="7" colname="col7" align="right"/>
     <oasis:thead>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3">HadOCC</oasis:entry>  
         <oasis:entry colname="col4">Diat-HadOCC</oasis:entry>  
         <oasis:entry colname="col5">MEDUSA</oasis:entry>  
         <oasis:entry colname="col6">PlankTOM10</oasis:entry>  
         <oasis:entry colname="col7">ERSEM</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">Nitrogen</oasis:entry>  
         <oasis:entry colname="col3">x</oasis:entry>  
         <oasis:entry colname="col4">x</oasis:entry>  
         <oasis:entry colname="col5">x</oasis:entry>  
         <oasis:entry colname="col6">x</oasis:entry>  
         <oasis:entry colname="col7">x</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">Phosphorous</oasis:entry>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4"/>  
         <oasis:entry colname="col5"/>  
         <oasis:entry colname="col6">x</oasis:entry>  
         <oasis:entry colname="col7">x</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">Nutrients</oasis:entry>  
         <oasis:entry colname="col2">Silica</oasis:entry>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4">x</oasis:entry>  
         <oasis:entry colname="col5">x</oasis:entry>  
         <oasis:entry colname="col6">x</oasis:entry>  
         <oasis:entry colname="col7">x</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">Iron</oasis:entry>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4">x</oasis:entry>  
         <oasis:entry colname="col5">x</oasis:entry>  
         <oasis:entry colname="col6">x</oasis:entry>  
         <oasis:entry colname="col7">x</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">Carbon</oasis:entry>  
         <oasis:entry colname="col3">x</oasis:entry>  
         <oasis:entry colname="col4">x</oasis:entry>  
         <oasis:entry colname="col5">x</oasis:entry>  
         <oasis:entry colname="col6">x</oasis:entry>  
         <oasis:entry colname="col7">x</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">Alkalinity</oasis:entry>  
         <oasis:entry colname="col3">x</oasis:entry>  
         <oasis:entry colname="col4">x</oasis:entry>  
         <oasis:entry colname="col5">x</oasis:entry>  
         <oasis:entry colname="col6">x</oasis:entry>  
         <oasis:entry colname="col7">x</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">Generic phytoplankton</oasis:entry>  
         <oasis:entry colname="col3">x</oasis:entry>  
         <oasis:entry colname="col4">x</oasis:entry>  
         <oasis:entry colname="col5"/>  
         <oasis:entry colname="col6">x</oasis:entry>  
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">Diatoms</oasis:entry>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4">x</oasis:entry>  
         <oasis:entry colname="col5">x</oasis:entry>  
         <oasis:entry colname="col6">x</oasis:entry>  
         <oasis:entry colname="col7">x</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">Large phytoplankton</oasis:entry>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4"/>  
         <oasis:entry colname="col5"/>  
         <oasis:entry colname="col6"/>  
         <oasis:entry colname="col7">x</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">Picoplankton</oasis:entry>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4"/>  
         <oasis:entry colname="col5">x</oasis:entry>  
         <oasis:entry colname="col6">x</oasis:entry>  
         <oasis:entry colname="col7">x</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">Coccolithophores</oasis:entry>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4"/>  
         <oasis:entry colname="col5"/>  
         <oasis:entry colname="col6">x</oasis:entry>  
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">Plankton</oasis:entry>  
         <oasis:entry colname="col2">N<inline-formula><mml:math id="M2" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> fixers</oasis:entry>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4"/>  
         <oasis:entry colname="col5"/>  
         <oasis:entry colname="col6">x</oasis:entry>  
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">functional type</oasis:entry>  
         <oasis:entry colname="col2">Flagellates</oasis:entry>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4"/>  
         <oasis:entry colname="col5"/>  
         <oasis:entry colname="col6"/>  
         <oasis:entry colname="col7">x</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">Phaeocystis</oasis:entry>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4"/>  
         <oasis:entry colname="col5"/>  
         <oasis:entry colname="col6">x</oasis:entry>  
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">Generic zooplankton</oasis:entry>  
         <oasis:entry colname="col3">x</oasis:entry>  
         <oasis:entry colname="col4">x</oasis:entry>  
         <oasis:entry colname="col5"/>  
         <oasis:entry colname="col6"/>  
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">Microzooplankton</oasis:entry>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4"/>  
         <oasis:entry colname="col5">x</oasis:entry>  
         <oasis:entry colname="col6">x</oasis:entry>  
         <oasis:entry colname="col7">x</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">Mesozooplankton</oasis:entry>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4"/>  
         <oasis:entry colname="col5">x</oasis:entry>  
         <oasis:entry colname="col6">x</oasis:entry>  
         <oasis:entry colname="col7">x</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">Macrozooplankton</oasis:entry>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4"/>  
         <oasis:entry colname="col5"/>  
         <oasis:entry colname="col6">x</oasis:entry>  
         <oasis:entry colname="col7"/>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">Heterotrophic nanoflagellates</oasis:entry>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4"/>  
         <oasis:entry colname="col5"/>  
         <oasis:entry colname="col6"/>  
         <oasis:entry colname="col7">x</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">Bacteria</oasis:entry>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4"/>  
         <oasis:entry colname="col5"/>  
         <oasis:entry colname="col6">x</oasis:entry>  
         <oasis:entry colname="col7">x</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">Tracers</oasis:entry>  
         <oasis:entry colname="col3">7</oasis:entry>  
         <oasis:entry colname="col4">13</oasis:entry>  
         <oasis:entry colname="col5">15</oasis:entry>  
         <oasis:entry colname="col6">39</oasis:entry>  
         <oasis:entry colname="col7">57</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d1e791"><list list-type="bullet">
            <list-item>

      <p id="d1e796">The Hadley Centre Ocean Carbon Cycle (HadOCC) model is a simple NPZD
(Nutrient, Phytoplankton, Zooplankton, Detritus) model consisting of one
phytoplankton group and one zooplankton group. There is one nutrient pool,
nitrogen, to which the cycling of carbon and alkalinity is coupled. Further
details can be found in Palmer and Totterdell (2001).</p>
            </list-item>
            <list-item>

      <p id="d1e802">Diat-HadOCC is a descendant of HadOCC with the primary difference being the
presence of two phytoplankton groups: diatoms and mixed phytoplankton. Further
differences include the addition of the nutrients silica and iron and the
effect of nutrient limitation on growth is multiplicative, where light
limitation is multiplied by successive nutrient limitation terms. Further
details can be found in Halloran et al. (2010).</p>
            </list-item>
            <list-item>

      <p id="d1e808">Model of Ecosystem Dynamics, nutrient Utilization, Sequestration and
Acidification (MEDUSA) is an intermediate complexity model comprising two
phytoplankton and two zooplankton groups. The ecosystem is split into small
(nanophytoplankton and microzooplankton) and large (diatom and
mesozooplankton) components, and non-living detrital material is similarly
split to reflect its sources. Nutrient pools included in this model are
nitrogen, silica and iron and the effect of nutrient limitation on growth is
also multiplicative. Cycles of carbon, alkalinity and dissolved oxygen are
also included. Further details can be found in Yool et al. (2011) and Yool
et al. (2013).</p>
            </list-item>
            <list-item>

      <p id="d1e814">PlankTOM10 is a relatively complex model and has 10 PFTs (diatoms,
coccolithophores, <italic>Phaeocystis</italic>, nitrogen fixers, picophytoplankton, mixed phytoplankton,
protozoa, mesozooplankton, macrozooplankton and bacteria). The nutrient
cycles included in PlankTOM10 are carbon, nitrogen, oxygen, phosphorous,
silica and a simplified iron cycle. Phytoplankton growth is regulated by the
minimum of nutrient limitation terms. All zooplankton groups eat smaller
PFTs, with preference based on size. Further details can be found in Le
Quéré et al. (2005) and Buitenhuis  et al. (2013).</p>
            </list-item>
            <list-item>

      <p id="d1e823">The European Regional Seas Ecosystem Model (ERSEM) was originally used for
shelf seas and consists of both pelagic and benthic ecosystems. Four
phytoplankton groups (picophytoplankton/flagellates, flagellates, large
phytoplankton and diatoms), three zooplankton groups (heterotrophic
flagellates, microzooplankton and mesozooplankton) and heterotrophic
bacteria are represented. Each zooplankton group grazes on a preferred
phytoplankton group or groups based on size. The nutrient pools consist of
carbon, nitrogen, phosphorous, silica and dissolved oxygen allowing for
dynamic stoichiometric internal quotas. The effect of nutrient limitation on
growth is a combination of multiplicative and maximum limitation factors.
More details can be found in Blackford (1997), Blackford et al. (2004) and
Butenschön et al. (2016).</p>
            </list-item>
          </list></p>
</sec>
<sec id="Ch1.S2.SS2">
  <title>Simulation</title>
      <p id="d1e834">For each biogeochemical model, conventional simulations from the same
physical initial state were performed identically from year 1890 through to
2007. For the first 60 years of these simulations (1890–1949 inclusive),
CORE2 (Common Ocean-ice Reference Experiments, version 2; Large and Yeager,
2009) seasonal climatology (i.e. without interannual variability) was used,
the so-called “normal year forcing”. Subsequently (1950–2007 inclusive),
interannually varying CORE2 forcing was used to complete the simulations.
CORE2 provides observationally derived geographical fields of downwelling
irradiance (short- and long-wave), precipitation (rain and snow), air
temperature, humidity, and meridional and zonal winds. These are used in
conjunction with bulk formulae to calculate net heat, freshwater and
momentum exchange between the atmosphere and the ocean. In addition, sea
surface salinity was weakly relaxed (characteristic timescale of 180 days)
towards observations to minimize drift. Note that the simulations were
“online”, in that physics and biogeochemistry were both formally simulated
simultaneously. Feedbacks between the model biology and ocean physics (e.g.
by the absorption of downwelling solar radiation) were disabled so that all
of the biogeochemical models experienced consistent simulated physics.
Additional details on the simulations can be found in Kwiatkowski  et al. (2014).</p>
      <p id="d1e837">For each model, where available, time series of sea surface temperature
(SST), mixed-layer depth (MLD, defined as a density difference from the
surface of 0.1 kg m<inline-formula><mml:math id="M3" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, surface dissolved inorganic nitrogen (DIN),
silica (SI), iron (FE), surface chlorophyll (CHL), integrated primary
production (PP), total surface phytoplankton (PHY) and zooplankton (ZOO)
biomass were extracted from 1957 to 2007 (same period as the observational
dataset used, see section below) for the Gulf of Alaska region. The time
series were averaged from monthly means to annual means and then averaged
spatially across the region defined by the boundaries of 54 to
62<inline-formula><mml:math id="M4" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N and 130 to 160<inline-formula><mml:math id="M5" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> W (same region as the
observational dataset used, see section below).</p>
</sec>
<sec id="Ch1.S2.SS3">
  <title>Observational dataset</title>
      <p id="d1e879">To compare shifts found in model time series to observed ones, SST data were
extracted from the Extended Reconstructed Sea Surface Temperature (ERSST)
dataset (version 3b) downloaded from <uri>https://www.ncdc.noaa.gov/ersst/</uri>. This
analysis uses the International Comprehensive Ocean-Atmosphere Data Set SST
data and combines ship and buoy data (Smith and Reynolds, 2003; Smith et
al., 2008). The data were available as monthly means with a spatial
resolution of 2<inline-formula><mml:math id="M6" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> <inline-formula><mml:math id="M7" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 2<inline-formula><mml:math id="M8" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> from 1957 to 2007. The ERSST
dataset was averaged spatially for each year over the Gulf of Alaska to form
a time series of annual mean SST. Comparison with observed time series for
other variables (i.e. MLD, DIN, SI, FE, CHL, PP, PHY, ZOO) is not possible
due to lack of data over suitable space and timescales. Time series of
large-scale oscillations representing the climate over the North Pacific
were obtained. The PDO index (Mantua et al., 1997) was downloaded from
<uri>http://www.atmos.washington.edu/~mantua/abst.PDO.html</uri>. The Multivariate ENSO Index (MEI; Wolter and Timlin,
1998) was downloaded from <uri>http://www.esrl.noaa.gov/psd/enso/mei/</uri> and the NPGO index (DiLorenzo et
al., 2008) was downloaded from <uri>http://www.o3d.org/npgo/npgo.php</uri>. Annual time series of PDO, ENSO and NPGO
indices were produced by averaging monthly time series.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F1"><caption><p id="d1e922">Five types of statistical models that were fitted to the
data. The solid lines are synthetic time series drawn from a model with
<bold>(I)</bold> a constant mean, <bold>(II)</bold> shift in the mean, <bold>(III)</bold> trend, <bold>(IV)</bold> shift in the
intercept of the trend (the trend is the same before and after the shift)
and <bold>(V)</bold> shift in both the intercept and trend. The constant mean <bold>(I)</bold> is the
null model for a shift in the mean <bold>(II)</bold> when testing for significance.
Similarly, the trend model <bold>(III)</bold> is the null model to test the shift
significance when the model selected is either a shift in the intercept
<bold>(IV)</bold> or a shift in both the intercept and trend <bold>(V)</bold>. The corresponding models are
further described in Table 2. Figure adapted from Beaulieu et al. (2012).</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://bg.copernicus.org/articles/13/4533/2016/bg-13-4533-2016-f01.pdf"/>

        </fig>

</sec>
<sec id="Ch1.S2.SS4">
  <title>Statistical analyses</title>
      <p id="d1e968">For the regime shift detection, we use the change-point detection method
presented in Beaulieu et al. (2012), which distinguishes shifts in a time
series from long-term trends and red noise. It consists of fitting a suite
of regression models to a time series with (I) constant mean, (II) shift in
the mean, (III) trend, (IV) shift in the intercept of the trend and (V)
shift in both the intercept and trend, and discriminates between them.
Figure 1 illustrates the five regression models tested in this study and
their equations are presented in Table 2. This methodology is based on the
Schwarz Information Criterion (SIC), which is a measure of goodness of fit
based on the maximum likelihood function of a given model penalized by the
number of parameters estimated to ensure balance between good fit and
parsimony. We use the SIC to (1) identify the timing of the shift under a
model formulation containing a shift and (2) determine which regression model
(among the five fitted) provides the best fit. The SIC formulations for the
five models are presented in Table 2. For the models with a shift (II, IV,
V), the SIC is calculated for each possible timing of a shift – the timing
with the lowest SIC corresponds to the year that the shift is most likely to
have occurred. The search for the most likely timing for a shift excludes
the first and last five data points in the time series to avoid spurious
detection (Beaulieu  et al., 2012). For example, the most likely timing for a
shift for model II would be
            <disp-formula id="Ch1.E1" content-type="numbered"><mml:math id="M9" display="block"><mml:mrow><mml:msub><mml:mtext>SIC</mml:mtext><mml:mtext>II</mml:mtext></mml:msub><mml:mo>(</mml:mo><mml:mi>p</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mo movablelimits="false">min⁡</mml:mo><mml:mfenced close="}" open="{"><mml:msub><mml:mtext>SIC</mml:mtext><mml:mtext>II</mml:mtext></mml:msub><mml:mo>(</mml:mo><mml:mi>k</mml:mi><mml:mo>)</mml:mo><mml:mo>,</mml:mo><mml:mi>k</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">5</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:mi>n</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mfenced><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
          The most likely timing for a shift under models IV and V can be found
similarly, and are denoted SIC<inline-formula><mml:math id="M10" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mtext>IV</mml:mtext></mml:msub><mml:mo>(</mml:mo><mml:mi>p</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> and SIC<inline-formula><mml:math id="M11" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mtext>V</mml:mtext></mml:msub><mml:mo>(</mml:mo><mml:mi>p</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, respectively.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T2" specific-use="star"><caption><p id="d1e1062">List of models fitted in this study with their associated
Schwarz Information Criterion (SIC) formulation.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="2">
     <oasis:colspec colnum="1" colname="col1" align="justify" colwidth="68pt"/>
     <oasis:colspec colnum="2" colname="col2" align="justify" colwidth="410pt"/>
     <oasis:thead>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">Model description</oasis:entry>  
         <oasis:entry colname="col2">Equations</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">(I) Constant mean <?xmltex \hack{\hfill\break}?></oasis:entry>  
         <oasis:entry colname="col2"><inline-formula><mml:math id="M14" display="inline"><mml:mrow><mml:msub><mml:mi>y</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="italic">ε</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mfenced open="(" close=")"><mml:mi>t</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:mi>n</mml:mi></mml:mfenced></mml:mrow></mml:math></inline-formula> <?xmltex \hack{\hfill\break}?>where <inline-formula><mml:math id="M15" display="inline"><mml:mrow><mml:msub><mml:mi>y</mml:mi><mml:mi>t</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> represents the time series, <inline-formula><mml:math id="M16" display="inline"><mml:mi mathvariant="italic">μ</mml:mi></mml:math></inline-formula> is the mean, <inline-formula><mml:math id="M17" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ε</mml:mi><mml:mi>t</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> are the random errors, <inline-formula><mml:math id="M18" display="inline"><mml:mi>t</mml:mi></mml:math></inline-formula> is the time and <inline-formula><mml:math id="M19" display="inline"><mml:mi>n</mml:mi></mml:math></inline-formula> is the length of the time series <?xmltex \hack{\hfill\break}?>SIC<inline-formula><mml:math id="M20" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mtext>I</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mi>n</mml:mi><mml:mi>log⁡</mml:mi><mml:mfenced close=")" open="("><mml:mtext>RSS</mml:mtext></mml:mfenced><mml:mo>+</mml:mo><mml:mi>n</mml:mi><mml:mfenced close=")" open="("><mml:mn mathvariant="normal">1</mml:mn><mml:mo>+</mml:mo><mml:mi>log⁡</mml:mi><mml:mfenced open="(" close=")"><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">π</mml:mi></mml:mfenced></mml:mfenced><mml:mo>+</mml:mo><mml:mfenced open="(" close=")"><mml:mn mathvariant="normal">2</mml:mn><mml:mo>-</mml:mo><mml:mi>n</mml:mi></mml:mfenced><mml:mi>log⁡</mml:mi><mml:mfenced close=")" open="("><mml:mi>n</mml:mi></mml:mfenced></mml:mrow></mml:math></inline-formula> <?xmltex \hack{\hfill\break}?>RSS <inline-formula><mml:math id="M21" display="inline"><mml:mrow><mml:mo>=</mml:mo><mml:munderover><mml:mo movablelimits="false">∑</mml:mo><mml:mrow><mml:mi>i</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:munderover><mml:msup><mml:mfenced open="(" close=")"><mml:msub><mml:mi>y</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi mathvariant="italic">μ</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>,</mml:mo></mml:mrow></mml:math></inline-formula> where <inline-formula><mml:math id="M22" display="inline"><mml:mover accent="true"><mml:mi mathvariant="italic">μ</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover></mml:math></inline-formula> is the maximum likelihood estimates of <inline-formula><mml:math id="M23" display="inline"><mml:mi mathvariant="italic">μ</mml:mi></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">(II) Shift in the mean <?xmltex \hack{\hfill\break}?></oasis:entry>  
         <oasis:entry colname="col2"><inline-formula><mml:math id="M24" display="inline"><mml:mrow><mml:msub><mml:mi>y</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mfenced close="" open="{"><mml:mtable class="array" columnalign="left"><mml:mtr><mml:mtd><mml:mrow><mml:msub><mml:mi mathvariant="italic">μ</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="italic">ε</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mfenced open="(" close=")"><mml:mi>t</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:mi>p</mml:mi></mml:mfenced></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:msub><mml:mi mathvariant="italic">μ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="italic">ε</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mfenced open="(" close=")"><mml:mi>t</mml:mi><mml:mo>=</mml:mo><mml:mi>p</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:mi>n</mml:mi></mml:mfenced></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mfenced></mml:mrow></mml:math></inline-formula> <?xmltex \hack{\hfill\break}?>where <inline-formula><mml:math id="M25" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">μ</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M26" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">μ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> are the means before and after the shift at time <inline-formula><mml:math id="M27" display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> <?xmltex \hack{\hfill\break}?>SIC<inline-formula><mml:math id="M28" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mtext>II</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mi>n</mml:mi><mml:mi>log⁡</mml:mi><mml:mfenced close=")" open="("><mml:mtext>RSS</mml:mtext></mml:mfenced><mml:mo>+</mml:mo><mml:mi>n</mml:mi><mml:mfenced open="(" close=")"><mml:mn mathvariant="normal">1</mml:mn><mml:mo>+</mml:mo><mml:mi>log⁡</mml:mi><mml:mfenced close=")" open="("><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">π</mml:mi></mml:mfenced></mml:mfenced><mml:mo>+</mml:mo><mml:mfenced open="(" close=")"><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo><mml:mi>n</mml:mi></mml:mfenced><mml:mi>log⁡</mml:mi><mml:mfenced close=")" open="("><mml:mi>n</mml:mi></mml:mfenced></mml:mrow></mml:math></inline-formula> <?xmltex \hack{\hfill\break}?>RSS <inline-formula><mml:math id="M29" display="inline"><mml:mrow><mml:mo>=</mml:mo><mml:munderover><mml:mo movablelimits="false">∑</mml:mo><mml:mrow><mml:mi>i</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>p</mml:mi></mml:munderover><mml:msup><mml:mfenced open="(" close=")"><mml:msub><mml:mi>y</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mover accent="true"><mml:mi mathvariant="italic">μ</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:munderover><mml:mo movablelimits="false">∑</mml:mo><mml:mrow><mml:mi>i</mml:mi><mml:mo>=</mml:mo><mml:mi>p</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:munderover><mml:msup><mml:mfenced open="(" close=")"><mml:msub><mml:mi>y</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mover accent="true"><mml:mi mathvariant="italic">μ</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>,</mml:mo></mml:mrow></mml:math></inline-formula> where <inline-formula><mml:math id="M30" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi mathvariant="italic">μ</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M31" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi mathvariant="italic">μ</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> are the maximum likelihood estimates of <inline-formula><mml:math id="M32" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">μ</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M33" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">μ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">(III) Linear trend <?xmltex \hack{\hfill\break}?></oasis:entry>  
         <oasis:entry colname="col2"><inline-formula><mml:math id="M34" display="inline"><mml:mrow><mml:msub><mml:mi>y</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mi mathvariant="italic">λ</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="italic">β</mml:mi><mml:mi>t</mml:mi><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="italic">ε</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mfenced open="(" close=")"><mml:mi>t</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:mi>n</mml:mi></mml:mfenced></mml:mrow></mml:math></inline-formula> <?xmltex \hack{\hfill\break}?>where <inline-formula><mml:math id="M35" display="inline"><mml:mi mathvariant="italic">λ</mml:mi></mml:math></inline-formula> is the intercept and <inline-formula><mml:math id="M36" display="inline"><mml:mi mathvariant="italic">β</mml:mi></mml:math></inline-formula> the trend of the linear regression model <?xmltex \hack{\hfill\break}?>SIC<inline-formula><mml:math id="M37" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mtext>III</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mi>n</mml:mi><mml:mi>log⁡</mml:mi><mml:mfenced open="(" close=")"><mml:mtext>RSS</mml:mtext></mml:mfenced><mml:mo>+</mml:mo><mml:mi>n</mml:mi><mml:mfenced open="(" close=")"><mml:mn mathvariant="normal">1</mml:mn><mml:mo>+</mml:mo><mml:mi>log⁡</mml:mi><mml:mfenced close=")" open="("><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">π</mml:mi></mml:mfenced></mml:mfenced><mml:mo>+</mml:mo><mml:mfenced close=")" open="("><mml:mn mathvariant="normal">3</mml:mn><mml:mo>-</mml:mo><mml:mi>n</mml:mi></mml:mfenced><mml:mi>log⁡</mml:mi><mml:mfenced open="(" close=")"><mml:mi>n</mml:mi></mml:mfenced></mml:mrow></mml:math></inline-formula> <?xmltex \hack{\hfill\break}?>RSS <inline-formula><mml:math id="M38" display="inline"><mml:mrow><mml:mo>=</mml:mo><mml:munderover><mml:mo movablelimits="false">∑</mml:mo><mml:mrow><mml:mi>i</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:munderover><mml:msup><mml:mfenced open="(" close=")"><mml:msub><mml:mi>y</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi mathvariant="italic">λ</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi mathvariant="italic">β</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mi>t</mml:mi></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>,</mml:mo></mml:mrow></mml:math></inline-formula> where <inline-formula><mml:math id="M39" display="inline"><mml:mover accent="true"><mml:mi mathvariant="italic">λ</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover></mml:math></inline-formula> and <inline-formula><mml:math id="M40" display="inline"><mml:mover accent="true"><mml:mi mathvariant="italic">β</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover></mml:math></inline-formula> are the maximum likelihood estimates of <inline-formula><mml:math id="M41" display="inline"><mml:mi mathvariant="italic">λ</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M42" display="inline"><mml:mi mathvariant="italic">β</mml:mi></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1">(IV) Shift in the intercept and same linear trend <?xmltex \hack{\hfill\break}?></oasis:entry>  
         <oasis:entry colname="col2"><inline-formula><mml:math id="M43" display="inline"><mml:mrow><mml:msub><mml:mi>y</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mfenced close="" open="{"><mml:mtable class="array" columnalign="left"><mml:mtr><mml:mtd><mml:mrow><mml:msub><mml:mi mathvariant="italic">λ</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>+</mml:mo><mml:mi mathvariant="italic">β</mml:mi><mml:mi>t</mml:mi><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="italic">ε</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mfenced close=")" open="("><mml:mi>t</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:mi>p</mml:mi></mml:mfenced></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:msub><mml:mi mathvariant="italic">λ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>+</mml:mo><mml:mi mathvariant="italic">β</mml:mi><mml:mi>t</mml:mi><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="italic">ε</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mfenced close=")" open="("><mml:mi>t</mml:mi><mml:mo>=</mml:mo><mml:mi>p</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:mi>n</mml:mi></mml:mfenced></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mfenced></mml:mrow></mml:math></inline-formula> <?xmltex \hack{\hfill\break}?>where <inline-formula><mml:math id="M44" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">λ</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M45" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">λ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> are the intercept before and after the shift <?xmltex \hack{\hfill\break}?>SIC<inline-formula><mml:math id="M46" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mtext>IV</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mi>n</mml:mi><mml:mi>log⁡</mml:mi><mml:mfenced close=")" open="("><mml:mtext>RSS</mml:mtext></mml:mfenced><mml:mo>+</mml:mo><mml:mi>n</mml:mi><mml:mfenced close=")" open="("><mml:mn mathvariant="normal">1</mml:mn><mml:mo>+</mml:mo><mml:mi>log⁡</mml:mi><mml:mfenced open="(" close=")"><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">π</mml:mi></mml:mfenced></mml:mfenced><mml:mo>+</mml:mo><mml:mfenced close=")" open="("><mml:mn mathvariant="normal">4</mml:mn><mml:mo>-</mml:mo><mml:mi>n</mml:mi></mml:mfenced><mml:mi>log⁡</mml:mi><mml:mfenced open="(" close=")"><mml:mi>n</mml:mi></mml:mfenced></mml:mrow></mml:math></inline-formula> <?xmltex \hack{\hfill\break}?>RSS <inline-formula><mml:math id="M47" display="inline"><mml:mrow><mml:mo>=</mml:mo><mml:munderover><mml:mo movablelimits="false">∑</mml:mo><mml:mrow><mml:mi>i</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>p</mml:mi></mml:munderover><mml:msup><mml:mfenced open="(" close=")"><mml:msub><mml:mi>y</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mover accent="true"><mml:mi mathvariant="italic">λ</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi mathvariant="italic">β</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mi>t</mml:mi></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:munderover><mml:mo movablelimits="false">∑</mml:mo><mml:mrow><mml:mi>i</mml:mi><mml:mo>=</mml:mo><mml:mi>p</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:munderover><mml:msup><mml:mfenced close=")" open="("><mml:msub><mml:mi>y</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mover accent="true"><mml:mi mathvariant="italic">λ</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>-</mml:mo><mml:mover accent="true"><mml:mi mathvariant="italic">β</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mi>t</mml:mi></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>,</mml:mo></mml:mrow></mml:math></inline-formula> where <inline-formula><mml:math id="M48" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi mathvariant="italic">λ</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mover accent="true"><mml:mi mathvariant="italic">λ</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M49" display="inline"><mml:mover accent="true"><mml:mi mathvariant="italic">β</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover></mml:math></inline-formula> are the maximum likelihood estimates of <inline-formula><mml:math id="M50" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">λ</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M51" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">λ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M52" display="inline"><mml:mi mathvariant="italic">β</mml:mi></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">(V) Shift in both the intercept and linear trend <?xmltex \hack{\hfill\break}?></oasis:entry>  
         <oasis:entry colname="col2"><inline-formula><mml:math id="M53" display="inline"><mml:mrow><mml:msub><mml:mi>y</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mfenced close="" open="{"><mml:mtable class="array" columnalign="left"><mml:mtr><mml:mtd><mml:mrow><mml:msub><mml:mi mathvariant="italic">λ</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="italic">β</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mi>t</mml:mi><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="italic">ε</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mfenced close=")" open="("><mml:mi>t</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:mi>p</mml:mi></mml:mfenced></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mrow><mml:msub><mml:mi mathvariant="italic">λ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="italic">β</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi>t</mml:mi><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="italic">ε</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mfenced close=")" open="("><mml:mi>t</mml:mi><mml:mo>=</mml:mo><mml:mi>p</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:mi>n</mml:mi></mml:mfenced></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:mfenced></mml:mrow></mml:math></inline-formula> <?xmltex \hack{\hfill\break}?>where <inline-formula><mml:math id="M54" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">β</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M55" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">β</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> are the trend before and after the shift <?xmltex \hack{\hfill\break}?>SIC<inline-formula><mml:math id="M56" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mtext>V</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mi>n</mml:mi><mml:mi>log⁡</mml:mi><mml:mfenced open="(" close=")"><mml:mtext>RSS</mml:mtext></mml:mfenced><mml:mo>+</mml:mo><mml:mi>n</mml:mi><mml:mfenced open="(" close=")"><mml:mn mathvariant="normal">1</mml:mn><mml:mo>+</mml:mo><mml:mi>log⁡</mml:mi><mml:mfenced close=")" open="("><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">π</mml:mi></mml:mfenced></mml:mfenced><mml:mo>+</mml:mo><mml:mfenced open="(" close=")"><mml:mn mathvariant="normal">5</mml:mn><mml:mo>-</mml:mo><mml:mi>n</mml:mi></mml:mfenced><mml:mi>log⁡</mml:mi><mml:mfenced open="(" close=")"><mml:mi>n</mml:mi></mml:mfenced></mml:mrow></mml:math></inline-formula> <?xmltex \hack{\hfill\break}?>RSS <inline-formula><mml:math id="M57" display="inline"><mml:mrow><mml:mo>=</mml:mo><mml:munderover><mml:mo movablelimits="false">∑</mml:mo><mml:mrow><mml:mi>i</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>p</mml:mi></mml:munderover><mml:msup><mml:mfenced open="(" close=")"><mml:msub><mml:mi>y</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mover accent="true"><mml:mi mathvariant="italic">λ</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mover accent="true"><mml:mi mathvariant="italic">β</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mi>t</mml:mi></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>+</mml:mo><mml:munderover><mml:mo movablelimits="false">∑</mml:mo><mml:mrow><mml:mi>i</mml:mi><mml:mo>=</mml:mo><mml:mi>p</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow><mml:mi>n</mml:mi></mml:munderover><mml:msup><mml:mfenced open="(" close=")"><mml:msub><mml:mi>y</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mover accent="true"><mml:mi mathvariant="italic">λ</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mover accent="true"><mml:mi mathvariant="italic">β</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mi>t</mml:mi></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>, where <inline-formula><mml:math id="M58" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi mathvariant="italic">λ</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mover accent="true"><mml:mi mathvariant="italic">λ</mml:mi><mml:mo mathvariant="normal" stretchy="false">^</mml:mo></mml:mover><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mover accent="true"><mml:mi mathvariant="italic">β</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M59" display="inline"><mml:mrow><mml:msub><mml:mover accent="true"><mml:mi mathvariant="italic">β</mml:mi><mml:mo stretchy="false" mathvariant="normal">^</mml:mo></mml:mover><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> are the maximum likelihood estimates of <inline-formula><mml:math id="M60" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">λ</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M61" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">λ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>,</mml:mo><mml:msub><mml:mi mathvariant="italic">β</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M62" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">β</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table><table-wrap-foot><p id="d1e1065"><inline-formula><mml:math id="M12" display="inline"><mml:msup><mml:mi/><mml:mo>*</mml:mo></mml:msup></mml:math></inline-formula> All these models rely on the assumption that the random errors are
independent and identically normally distributed <inline-formula><mml:math id="M13" display="inline"><mml:mrow><mml:msub><mml:mi mathvariant="italic">ε</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mo>∼</mml:mo><mml:mrow class="chem"><mml:mi mathvariant="normal">N</mml:mi></mml:mrow><mml:mo>(</mml:mo><mml:mn mathvariant="normal">0</mml:mn><mml:mo>,</mml:mo><mml:msup><mml:mi mathvariant="italic">σ</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>.</p></table-wrap-foot></table-wrap>

      <p id="d1e2544">Once the SIC of the five models are computed, the smallest one is selected
as the most appropriate to represent the time series (Table 2). If the SIC
of a model without a shift (constant mean (I) or trend (III)) is lower than
the SIC of the models with a shift (shift in the mean (II), shift in the
intercept (IV) or shift in the intercept and trend (V)), no abrupt change is
detected in that time series. On the other hand, if a model with a shift has
the smallest SIC, this indicates that there could be a shift in that time
series.</p>
      <p id="d1e2547">There is no significance level involved with the decision rule presented
above and shifts tend to be too easily detected (Beaulieu  et al., 2012).
Therefore, a critical value can be added to the decision rule to assess the
significance of the shift based on the difference in SIC between the shift
model and the null model and is determined using Monte Carlo simulations.
For example, if model II is selected with the smallest SIC, the null model
to compare with is model I. The shift detected in model II will be
significant if
            <disp-formula id="Ch1.E2" content-type="numbered"><mml:math id="M63" display="block"><mml:mrow><mml:msub><mml:mtext>SIC</mml:mtext><mml:mtext>II</mml:mtext></mml:msub><mml:mo>(</mml:mo><mml:mi>p</mml:mi><mml:mo>)</mml:mo><mml:mo>-</mml:mo><mml:msub><mml:mtext>SIC</mml:mtext><mml:mtext>I</mml:mtext></mml:msub><mml:mo>&lt;</mml:mo><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="italic">α</mml:mi></mml:msub><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>
          where <inline-formula><mml:math id="M64" display="inline"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="italic">α</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is the critical value at the <inline-formula><mml:math id="M65" display="inline"><mml:mi mathvariant="italic">α</mml:mi></mml:math></inline-formula> critical level and is determined by Monte Carlo simulation. Similarly,
when models IV or V have the smallest SIC, the shift will be significant if
            <disp-formula id="Ch1.E3" content-type="numbered"><mml:math id="M66" display="block"><mml:mrow><mml:msub><mml:mtext>SIC</mml:mtext><mml:mtext>IV</mml:mtext></mml:msub><mml:mo>(</mml:mo><mml:mi>p</mml:mi><mml:mo>)</mml:mo><mml:mo>-</mml:mo><mml:msub><mml:mtext>SIC</mml:mtext><mml:mtext>III</mml:mtext></mml:msub><mml:mo>&lt;</mml:mo><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="italic">α</mml:mi></mml:msub></mml:mrow></mml:math></disp-formula>
          or
            <disp-formula id="Ch1.E4" content-type="numbered"><mml:math id="M67" display="block"><mml:mrow><mml:msub><mml:mtext>SIC</mml:mtext><mml:mtext>V</mml:mtext></mml:msub><mml:mo>(</mml:mo><mml:mi>p</mml:mi><mml:mo>)</mml:mo><mml:mo>-</mml:mo><mml:msub><mml:mtext>SIC</mml:mtext><mml:mtext>III</mml:mtext></mml:msub><mml:mo>&lt;</mml:mo><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="italic">α</mml:mi></mml:msub><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>
          We generate 1000 synthetic time series randomly drawn from a normal
distribution with the same length (i.e. number of years), variance and
first-order autocorrelation (if present) as the data. The presence of
autocorrelation usually indicates the presence of external factors not
accounted for in the model and the AR(1) should act as a parameter which
roughly comprises these factors. The SIC differences between the model with
a shift (e.g. model II) and the corresponding null model (e.g. model I) are
calculated. This produces a null distribution for <inline-formula><mml:math id="M68" display="inline"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="italic">α</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>
against which the observed SIC difference is compared to estimate the
<inline-formula><mml:math id="M69" display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> value. The <inline-formula><mml:math id="M70" display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> value here is the probability of observing an SIC difference
at least as extreme as that observed under the null hypothesis of no shift
in the time series. We use a 5 % critical level, i.e. we reject the null
hypothesis of no shift if the <inline-formula><mml:math id="M71" display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> value is smaller than 0.05. This analysis is
based on the assumption that the residuals of the selected model are
normally distributed with a constant variance, which is verified using a
Lilliefors test and Fisher test (5 % critical level).
Violation of these assumptions could indicate the presence of additional
shifts in the time series.</p>
      <p id="d1e2699">This method is flexible and allows for the detection of shifts that are more
complex than simply a shift in the mean. Furthermore, it distinguishes
potential shifts from red noise, which is important given the background
climate change trend and long memory of the climate system (characterized as
high first-order autocorrelation). However, this method can detect at most
one shift in the time series, while there could possibly be multiple shifts
over a multidecadal time period. Therefore, the shift identified will be the
largest to occur in a time series, which for the Gulf of Alaska is expected
to be the 1977 regime shift.</p>
      <p id="d1e2702">To unveil shifts in SST in and around the Gulf of Alaska, we first apply
this methodology to observed annual SST time series over the North Pacific
(from 40–70<inline-formula><mml:math id="M72" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N and 180–120<inline-formula><mml:math id="M73" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> W). Second, we apply this methodology to
time series of physical and biological variables simulated from each of the
five ocean biogeochemical models, and to observed SST, averaged over the
Gulf of Alaska as described in Sects. 2.1 and 2.2 respectively. As a
visual aid, we also calculate cumulative sums of the <inline-formula><mml:math id="M74" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> scores of each time
series. Cumulative sums are useful for monitoring time series as they
exhibit a change of slope when a shift in the time series occurs (e.g. Page,
1954).</p>
      <p id="d1e2730">We apply principal component analysis to the <inline-formula><mml:math id="M75" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> scores of the physical and
biological time series averaged over the Gulf of Alaska for each model to
reduce the dimensions of all variables analysed here into uncorrelated
principal components. We also apply the change-point methodology to the
first principal component (PC1) obtained for each model, which explains most
of the variability, and test whether PC1 also exhibits a shift in the late
1970s. We then investigate which variables are contributing most to the late
1970s shift, by comparing their individual contributions to PC1 for each
model.</p>
      <p id="d1e2740">We further investigate the physical forcing – biological response
relationship in models that simulate a significant shift in the late 1970s
in PC1. We investigate the presence of changes in physical–biological
relationships before and after the shift by comparing the regression slopes,
following the approach proposed by Bestelmeyer et al. (2011). Similar slopes
before and after the shift could indicate a linear response to the physical
forcing, while a change in the slopes might rather suggest a change in the
relationship and thus, a nonlinear response. More specifically, we fit
simple linear regression models, such as

                <disp-formula specific-use="align" content-type="numbered"><mml:math id="M76" display="block"><mml:mtable displaystyle="true"><mml:mtr><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:msub><mml:mi>y</mml:mi><mml:mi>t</mml:mi></mml:msub></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mo>=</mml:mo><mml:msub><mml:mi>a</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi>b</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:msub><mml:mi>x</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi>e</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi>t</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:mi>p</mml:mi></mml:mrow></mml:mtd></mml:mtr><mml:mlabeledtr id="Ch1.E5"><mml:mtd/><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:msub><mml:mi>y</mml:mi><mml:mi>t</mml:mi></mml:msub></mml:mrow></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mo>=</mml:mo><mml:msub><mml:mi>a</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi>b</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:msub><mml:mi>x</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi>e</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi>t</mml:mi><mml:mo>=</mml:mo><mml:mi>p</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>,</mml:mo><mml:mi mathvariant="normal">…</mml:mi><mml:mo>,</mml:mo><mml:mi>n</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

            where <inline-formula><mml:math id="M77" display="inline"><mml:mrow><mml:msub><mml:mi>y</mml:mi><mml:mi>t</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> represents the biological response (either CHL, PP, PHY or
ZOO), <inline-formula><mml:math id="M78" display="inline"><mml:mrow><mml:msub><mml:mi>x</mml:mi><mml:mi>t</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is the physical forcing (either SST or MLD), <inline-formula><mml:math id="M79" display="inline"><mml:mrow><mml:msub><mml:mi>a</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and
<inline-formula><mml:math id="M80" display="inline"><mml:mrow><mml:msub><mml:mi>b</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> are the intercept and regression slope before the shift at time
<inline-formula><mml:math id="M81" display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>,</mml:mo><mml:msub><mml:mi>a</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M82" display="inline"><mml:mrow><mml:msub><mml:mi>b</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> are the intercept and regression slope after the
shift and <inline-formula><mml:math id="M83" display="inline"><mml:mrow><mml:msub><mml:mi>e</mml:mi><mml:mi>t</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> are the white noise errors. To verify whether the
relationships are similar before and after the shift, we test whether the
slopes are equal (<inline-formula><mml:math id="M84" display="inline"><mml:mrow><mml:msub><mml:mi>b</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>=</mml:mo><mml:msub><mml:mi>b</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> using the Student test statistic (with
<inline-formula><mml:math id="M85" display="inline"><mml:mrow><mml:mi>n</mml:mi><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:math></inline-formula> degrees of freedom) described by Paternoster  et al. (1998):

                <disp-formula specific-use="align" content-type="numbered"><mml:math id="M86" display="block"><mml:mtable displaystyle="true"><mml:mlabeledtr id="Ch1.E6"><mml:mtd/><mml:mtd><mml:mstyle displaystyle="true" class="stylechange"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mi>t</mml:mi><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>b</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>b</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mrow><mml:msub><mml:mi>b</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>b</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:mfrac></mml:mstyle></mml:mrow></mml:mtd></mml:mlabeledtr><mml:mlabeledtr id="Ch1.E7"><mml:mtd/><mml:mtd><mml:mstyle class="stylechange" displaystyle="true"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:msub><mml:mi>s</mml:mi><mml:mrow><mml:msub><mml:mi>b</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>b</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:msub><mml:mo>=</mml:mo><mml:msqrt><mml:mrow><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:msub><mml:mi>b</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:mrow><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup><mml:mo>+</mml:mo><mml:msubsup><mml:mi>s</mml:mi><mml:mrow><mml:msub><mml:mi>b</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow><mml:mn mathvariant="normal">2</mml:mn></mml:msubsup></mml:mrow></mml:msqrt><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mlabeledtr></mml:mtable></mml:math></disp-formula>

            where <inline-formula><mml:math id="M87" display="inline"><mml:mrow><mml:msub><mml:mi>b</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M88" display="inline"><mml:mrow><mml:msub><mml:mi>b</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> are estimated using least squares with
<inline-formula><mml:math id="M89" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mrow><mml:msub><mml:mi>b</mml:mi><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M90" display="inline"><mml:mrow><mml:msub><mml:mi>s</mml:mi><mml:mrow><mml:msub><mml:mi>b</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula> being the respective standard
errors.</p><?xmltex \hack{\newpage}?>
</sec>
</sec>
<sec id="Ch1.S3">
  <title>Results</title>
      <p id="d1e3148">Figure 2 presents the results of the change-point analysis on gridded SST
observations for the North Pacific. This reveals a predominant shift in 1977
over the Gulf of Alaska region, which also extends as a coastal band towards
the California Current region and the Bering Sea. A late 1980s shift is
detected in a smaller area in the middle of the gyre. It must be noted that
spatial homogeneity of the shift is to be expected here given that the ERSST
dataset is produced using empirical orthogonal functions (Smith and
Reynolds, 2003).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F2"><caption><p id="d1e3153">Timing of shift detected in observed sea surface
temperature in the North Pacific using change-point analysis showing a
predominant signal in 1977. White areas indicate where a shift is not
significant (<inline-formula><mml:math id="M91" display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> value &gt; 0.05). The black box indicates the
Gulf of Alaska region used in this study.</p></caption>
        <?xmltex \igopts{width=236.157874pt}?><graphic xlink:href="https://bg.copernicus.org/articles/13/4533/2016/bg-13-4533-2016-f02.png"/>

      </fig>

      <p id="d1e3169">In the observed SST time series averaged over the Gulf of Alaska, a
statistically significant shift is detected and manifests as a rapid
increase in the mean of <inline-formula><mml:math id="M92" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 1 <inline-formula><mml:math id="M93" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C after a decreasing
trend (Fig. 3a). In the model physical time series (which are identical in
all five OBGC models), SST exhibits the same signal as the observations: a
shift in the intercept and gradient occurring in 1976, while the MLD is best
represented by a linear trend. However, the model MLD time series show
strong decadal variability with large changes occurring in the mid-1970s and
at the beginning of the 1990s (Fig. 3b–c). Results of change-point analysis
on large-scale oscillations characterizing the climate over the region are
also presented in Fig. 3d–f and show a significant shift in the PDO in
the late 1970s while the NPGO and MEI annual time series do not indicate a
shift.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F3"><caption><p id="d1e3191">Time series of <bold>(a)</bold> simulated sea surface temperature
(SST), <bold>(b)</bold> observed SST and <bold>(c)</bold> simulated mixed-layer depth (MLD) for the
Gulf of Alaska. The simulated time series of SST and MLD are the same in the
five ocean models used. Time series of large-scale oscillations representing
the climate in the Gulf of Alaska: <bold>(d)</bold> Pacific Decadal Oscillation (PDO)
index, <bold>(e)</bold> North Pacific Gyre Oscillation (NPGO) index and <bold>(f)</bold> multivariate
El Niño Southern Oscillation index (MEI). The grey dotted lines
represent the statistical model chosen (see Table A1) to fit these time
series. Both the simulated SST and observed SST exhibit a significant shift
in intercept and trend occurring in 1976 (<inline-formula><mml:math id="M94" display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> value &lt; 0.05, see Table A1). The MLD time series do not exhibit a significant shift and is best
represented by a linear trend. Among the large-scale oscillations, only the
PDO exhibits a significant shift in 1976.</p></caption>
        <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://bg.copernicus.org/articles/13/4533/2016/bg-13-4533-2016-f03.pdf"/>

      </fig>

      <p id="d1e3226">The change-point analysis was performed on PC1 for each model (Fig. 4,
Table 3), which explains most of the variance for each model (except MEDUSA,
36 % of variance explained; Table 4). HadOCC exhibits a shift in 1977 in
PC1 (Table 3), for which all variables except MLD have large relative
contributions (&gt; 10 % relative contribution, Table 4). The
first principal component in Diat-HadOCC exhibits a shift in 1976 and
explains 63 % of the total variance. The variable offering the smallest
relative contribution is again the MLD (Table 4). In MEDUSA, a shift is also
detected in the late 1970s in the first component, which explains only
36 % of the variance. The SST, CHL and nutrients are the most important
variables with relative contributions larger than 10 % (Table 4). The MLD
has a relative contribution of 0.94 % to PC1 (Table 4). The relative
contributions of the nutrients in the HadOCC, Diat-HadOCC and MEDUSA late
1970s shift detected in the first principal component suggests the
controlling factor is nutrient limitation (i.e. bottom-up control) in these
models. In ERSEM and PlankTOM10, there are no shifts detected in the first
principal component. Similar results are obtained when excluding SST and MLD
from PC1 (Appendix A).</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T3" specific-use="star"><caption><p id="d1e3232">Results from change-point detection analysis on the first
principal component (PC1) of each model. Years in bold have a significant
shift (<inline-formula><mml:math id="M95" display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> value &lt; 0.05).</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="6">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:colspec colnum="6" colname="col6" align="right"/>
     <oasis:thead>
       <oasis:row>  
         <oasis:entry colname="col1">Model</oasis:entry>  
         <oasis:entry colname="col2">Shift</oasis:entry>  
         <oasis:entry colname="col3">Shift type</oasis:entry>  
         <oasis:entry colname="col4">SIC</oasis:entry>  
         <oasis:entry colname="col5">SIC</oasis:entry>  
         <oasis:entry colname="col6"><inline-formula><mml:math id="M100" display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> value</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">year</oasis:entry>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4">(Null model)</oasis:entry>  
         <oasis:entry colname="col5"/>  
         <oasis:entry colname="col6"/>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>  
         <oasis:entry colname="col1">HadOCC</oasis:entry>  
         <oasis:entry colname="col2"><bold>1977</bold></oasis:entry>  
         <oasis:entry colname="col3">mean</oasis:entry>  
         <oasis:entry colname="col4">180.62</oasis:entry>  
         <oasis:entry colname="col5">225.69</oasis:entry>  
         <oasis:entry colname="col6">&lt; 0.01<inline-formula><mml:math id="M101" display="inline"><mml:msup><mml:mi/><mml:mtext>a, c</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">DiatHadOCC</oasis:entry>  
         <oasis:entry colname="col2"><bold>1976</bold></oasis:entry>  
         <oasis:entry colname="col3">mean</oasis:entry>  
         <oasis:entry colname="col4">185.55</oasis:entry>  
         <oasis:entry colname="col5">240.42</oasis:entry>  
         <oasis:entry colname="col6">&lt; 0.01<inline-formula><mml:math id="M102" display="inline"><mml:msup><mml:mi/><mml:mtext>c</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">MEDUSA</oasis:entry>  
         <oasis:entry colname="col2"><bold>1978</bold></oasis:entry>  
         <oasis:entry colname="col3">trend and intercept</oasis:entry>  
         <oasis:entry colname="col4">184.54</oasis:entry>  
         <oasis:entry colname="col5">207.00</oasis:entry>  
         <oasis:entry colname="col6">&lt; 0.01<inline-formula><mml:math id="M103" display="inline"><mml:msup><mml:mi/><mml:mtext>c</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">PlankTOM10</oasis:entry>  
         <oasis:entry colname="col2">1987</oasis:entry>  
         <oasis:entry colname="col3">intercept</oasis:entry>  
         <oasis:entry colname="col4">141.14</oasis:entry>  
         <oasis:entry colname="col5">152.90</oasis:entry>  
         <oasis:entry colname="col6">0.21<inline-formula><mml:math id="M104" display="inline"><mml:msup><mml:mi/><mml:mtext>c</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">ERSEM</oasis:entry>  
         <oasis:entry colname="col2">1987</oasis:entry>  
         <oasis:entry colname="col3">intercept</oasis:entry>  
         <oasis:entry colname="col4">189.09</oasis:entry>  
         <oasis:entry colname="col5">192.55</oasis:entry>  
         <oasis:entry colname="col6">0.63<inline-formula><mml:math id="M105" display="inline"><mml:msup><mml:mi/><mml:mtext>c</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table><table-wrap-foot><p id="d1e3242"><inline-formula><mml:math id="M96" display="inline"><mml:msup><mml:mi/><mml:mtext>a</mml:mtext></mml:msup></mml:math></inline-formula> Residuals not normally distributed (Lilliefors test, 5 % critical
level).
<inline-formula><mml:math id="M97" display="inline"><mml:msup><mml:mi/><mml:mtext>b</mml:mtext></mml:msup></mml:math></inline-formula> Residual variance not constant (Fisher test, 5 % critical
level).
<inline-formula><mml:math id="M98" display="inline"><mml:msup><mml:mi/><mml:mtext>c</mml:mtext></mml:msup></mml:math></inline-formula> Residuals not independent (Durbin-Watson test, 5 % critical level):
the Monte Carlo simulations to estimate the <inline-formula><mml:math id="M99" display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> value incorporates the
first-order autocorrelation of the residuals.</p></table-wrap-foot></table-wrap>

      <?xmltex \floatpos{t}?><fig id="Ch1.F4"><caption><p id="d1e3503">First principal component (PC1) of sea surface
temperature, mixed-layer depth, surface dissolved inorganic nitrogen,
silica, iron, surface chlorophyll, integrated primary production, total
surface phytoplankton and zooplankton biomass (if available) averaged over
the Gulf of Alaska for each model. The grey dotted lines represent the statistical model chosen to fit these time series (see Table 3). HadOCC, DiatHadOCC and MEDUSA PC1 exhibit a significant shift in the late 1970s.</p></caption>
        <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://bg.copernicus.org/articles/13/4533/2016/bg-13-4533-2016-f04.pdf"/>

      </fig>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T4" specific-use="star"><caption><p id="d1e3516">Results of the principal component analysis: percentage of
variance explained by the first principal component (PC1) and relative
contributions of the different variables to this component.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="11">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:colspec colnum="6" colname="col6" align="right"/>
     <oasis:colspec colnum="7" colname="col7" align="right"/>
     <oasis:colspec colnum="8" colname="col8" align="right"/>
     <oasis:colspec colnum="9" colname="col9" align="right"/>
     <oasis:colspec colnum="10" colname="col10" align="right"/>
     <oasis:colspec colnum="11" colname="col11" align="right"/>
     <oasis:thead>
       <oasis:row>  
         <oasis:entry colname="col1">Model</oasis:entry>  
         <oasis:entry colname="col2">Variance</oasis:entry>  
         <oasis:entry rowsep="1" namest="col3" nameend="col11" align="center">Relative contribution (%) </oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">explained (%)</oasis:entry>  
         <oasis:entry colname="col3">SST</oasis:entry>  
         <oasis:entry colname="col4">MLD</oasis:entry>  
         <oasis:entry colname="col5">CHL</oasis:entry>  
         <oasis:entry colname="col6">PP</oasis:entry>  
         <oasis:entry colname="col7">PHY</oasis:entry>  
         <oasis:entry colname="col8">ZOO</oasis:entry>  
         <oasis:entry colname="col9">DIN</oasis:entry>  
         <oasis:entry colname="col10">FE</oasis:entry>  
         <oasis:entry colname="col11">SI</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>  
         <oasis:entry colname="col1">HadOCC</oasis:entry>  
         <oasis:entry colname="col2">61.09</oasis:entry>  
         <oasis:entry colname="col3">13.53</oasis:entry>  
         <oasis:entry colname="col4">2.69</oasis:entry>  
         <oasis:entry colname="col5">19.02</oasis:entry>  
         <oasis:entry colname="col6">11.08</oasis:entry>  
         <oasis:entry colname="col7">18.91</oasis:entry>  
         <oasis:entry colname="col8">16.82</oasis:entry>  
         <oasis:entry colname="col9">17.94</oasis:entry>  
         <oasis:entry colname="col10">–</oasis:entry>  
         <oasis:entry colname="col11">–</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">DiatHadOCC</oasis:entry>  
         <oasis:entry colname="col2">63.42</oasis:entry>  
         <oasis:entry colname="col3">10.41</oasis:entry>  
         <oasis:entry colname="col4">1.92</oasis:entry>  
         <oasis:entry colname="col5">13.88</oasis:entry>  
         <oasis:entry colname="col6">12.84</oasis:entry>  
         <oasis:entry colname="col7">13.93</oasis:entry>  
         <oasis:entry colname="col8">13.51</oasis:entry>  
         <oasis:entry colname="col9">11.85</oasis:entry>  
         <oasis:entry colname="col10">12.50</oasis:entry>  
         <oasis:entry colname="col11">9.16</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">MEDUSA</oasis:entry>  
         <oasis:entry colname="col2">36.33</oasis:entry>  
         <oasis:entry colname="col3">10.16</oasis:entry>  
         <oasis:entry colname="col4">0.94</oasis:entry>  
         <oasis:entry colname="col5">15.91</oasis:entry>  
         <oasis:entry colname="col6">7.34</oasis:entry>  
         <oasis:entry colname="col7">9.90</oasis:entry>  
         <oasis:entry colname="col8">6.18</oasis:entry>  
         <oasis:entry colname="col9">19.07</oasis:entry>  
         <oasis:entry colname="col10">16.31</oasis:entry>  
         <oasis:entry colname="col11">14.18</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">PlankTOM10</oasis:entry>  
         <oasis:entry colname="col2">66.05</oasis:entry>  
         <oasis:entry colname="col3">7.74</oasis:entry>  
         <oasis:entry colname="col4">6.25</oasis:entry>  
         <oasis:entry colname="col5">14.29</oasis:entry>  
         <oasis:entry colname="col6">13.99</oasis:entry>  
         <oasis:entry colname="col7">14.59</oasis:entry>  
         <oasis:entry colname="col8">14.27</oasis:entry>  
         <oasis:entry colname="col9">14.30</oasis:entry>  
         <oasis:entry colname="col10">1.10</oasis:entry>  
         <oasis:entry colname="col11">13.48</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">ERSEM</oasis:entry>  
         <oasis:entry colname="col2">50.74</oasis:entry>  
         <oasis:entry colname="col3">8.88</oasis:entry>  
         <oasis:entry colname="col4">1.31</oasis:entry>  
         <oasis:entry colname="col5">14.08</oasis:entry>  
         <oasis:entry colname="col6">15.05</oasis:entry>  
         <oasis:entry colname="col7">8.32</oasis:entry>  
         <oasis:entry colname="col8">12.71</oasis:entry>  
         <oasis:entry colname="col9">9.63</oasis:entry>  
         <oasis:entry colname="col10">15.86</oasis:entry>  
         <oasis:entry colname="col11">14.18</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d1e3787">The results of the change-point analysis on all observational and model
individual time series are presented in Appendix B (Table B1). The fit of
the most appropriate statistical models for the biological variables for
each OBGC model are also presented in Appendix B (Figs. B1–B5).
Statistically significant shifts are found more often in the simpler OBGC
models (HadOCC, Diat-HadOCC and MEDUSA) than the complex ones (Table B1),
which is consistent with the results obtained on the first principal
component for each model. Of the statistically significant shifts identified
in these models, the majority occurred in the late 1970s. In HadOCC, the
late 1970s shift corresponds to a decrease in DIN, CHL, PHY and ZOO, while a
large increase in PP is detected in 1991. Nevertheless, PP is decreasing
over the period 1957–1990 (Fig. B1). In Diat-HadOCC, all parameters exhibit
a shift in the late 1970s, although it is not significant in PHY and ZOO.
The significant shifts in the late 1970s manifest as a decrease in SI, FE,
CHL and PP. In MEDUSA, shifts in DIN and FE (although not significant) are
identified in the late 1970s. ERSEM exhibits a significant shift in CHL in
the late 1970s, while PlankTOM10 does not have any significant shifts for
that period.</p>
      <p id="d1e3790">As a visual support for the change-point analysis, cumulative sums of the
<inline-formula><mml:math id="M106" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> scores of each time series within each model are presented in Fig. 5. A
shift in a time series is revealed by a change of slope of the cumulative
sums. The change of slope in SST is sharp, as one would expect given the
significant shift detected. Even though our analysis suggests a long-term
deepening of the MLD rather than an abrupt change, subtle decreases are
suggested by smooth change of slope in the cumulative sum in the late 1970s
and 1980s. These changes are clearly propagated to the other parameters in
HadOCC, DiatHadOCC and MEDUSA with a sharp change of slope, but smoother
change in ERSEM and PlankTOM10.</p>
      <p id="d1e3800">We further investigate the forcing–response relationship between SST and the
biological variables (CHL, PP, PHY, ZOO) in HadOCC, DiatHadOCC and MEDUSA
(Fig. 6) before and after 1977, as a significant shift is present in PC1 in
these models. The slopes of the linear relationships between SST and the
biological variables are mostly similar before and after 1977 (Table 5).
This is consistent with a linear, rather than nonlinear, response to changes
in SST forcing. There is one exception for ZOO for which the difference in
slopes is significant with a stronger relationship after 1977 in HadOCC and
DiatHadOCC (Table 5, Fig. 6), which could suggest an amplified nonlinear
response.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F5"><caption><p id="d1e3805">Cumulative sums of the <inline-formula><mml:math id="M107" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> scores of simulated sea surface
temperature (SST), mixed-layer depth (MLD), surface dissolved inorganic
nitrogen (DIN), silica (SI), iron (FE), surface chlorophyll (CHL),
integrated primary production (PP), total surface phytoplankton (PHY) and
zooplankton (ZOO) biomass for each model averaged over the Gulf of Alaska
region. <inline-formula><mml:math id="M108" display="inline"><mml:mi>Z</mml:mi></mml:math></inline-formula> scores are calculated by subtracting the mean and dividing by the
standard deviation of each time series. Cumulative sums of the <inline-formula><mml:math id="M109" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> scores are
then calculated. The vertical lines in 1977 provide a guide to the eye
showing where the slopes change after 1977.</p></caption>
        <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://bg.copernicus.org/articles/13/4533/2016/bg-13-4533-2016-f05.pdf"/>

      </fig>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T5" specific-use="star"><caption><p id="d1e3839">Forcing–response regressions in HadOCC, Diat-HadOCC and
MEDUSA with sea surface temperature (SST) as the physical forcing and
surface chlorophyll (CHL), integrated primary production (PP), total surface
phytoplankton (PHY) and zooplankton biomass (ZOO) as the responses. The
slopes of the linear regressions between the forcing and response before and
after the shift are compared using a test of equality of two regression
slopes. Bold indicates significant slope differences (<inline-formula><mml:math id="M110" display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> value &lt; 0.05).</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="6">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:colspec colnum="6" colname="col6" align="right"/>
     <oasis:thead>
       <oasis:row rowsep="1">  
         <oasis:entry namest="col1" nameend="col6" align="center">HadOCC </oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>  
         <oasis:entry colname="col1">Forcing</oasis:entry>  
         <oasis:entry colname="col2">Response</oasis:entry>  
         <oasis:entry colname="col3">Slope 1957–1976</oasis:entry>  
         <oasis:entry colname="col4">Slope 1977–2007</oasis:entry>  
         <oasis:entry colname="col5">Test statistic</oasis:entry>  
         <oasis:entry colname="col6"><inline-formula><mml:math id="M113" display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> value</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3">(standard error)</oasis:entry>  
         <oasis:entry colname="col4">(standard error)</oasis:entry>  
         <oasis:entry colname="col5"/>  
         <oasis:entry colname="col6"/>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">SST</oasis:entry>  
         <oasis:entry colname="col2">CHL</oasis:entry>  
         <oasis:entry colname="col3"><inline-formula><mml:math id="M114" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.025 (0.028)</oasis:entry>  
         <oasis:entry colname="col4"><inline-formula><mml:math id="M115" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.008 (0.024)</oasis:entry>  
         <oasis:entry colname="col5">1.407</oasis:entry>  
         <oasis:entry colname="col6">0.166</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">PP</oasis:entry>  
         <oasis:entry colname="col3">0.000 (0.005)</oasis:entry>  
         <oasis:entry colname="col4">0.021 (0.011)</oasis:entry>  
         <oasis:entry colname="col5"><inline-formula><mml:math id="M116" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>1.703</oasis:entry>  
         <oasis:entry colname="col6">0.095</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">PHY</oasis:entry>  
         <oasis:entry colname="col3"><inline-formula><mml:math id="M117" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.008 (0.014)</oasis:entry>  
         <oasis:entry colname="col4"><inline-formula><mml:math id="M118" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.030 (0.013)</oasis:entry>  
         <oasis:entry colname="col5">1.179</oasis:entry>  
         <oasis:entry colname="col6">0.245</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">ZOO</oasis:entry>  
         <oasis:entry colname="col3">0.002 (0.004)</oasis:entry>  
         <oasis:entry colname="col4"><inline-formula><mml:math id="M119" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.012 (0.003)</oasis:entry>  
         <oasis:entry colname="col5">2.823</oasis:entry>  
         <oasis:entry colname="col6"><bold>0.007</bold></oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry namest="col1" nameend="col6" align="center">Diat-HadOCC </oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">Forcing</oasis:entry>  
         <oasis:entry colname="col2">Response</oasis:entry>  
         <oasis:entry colname="col3">Slope 1957–1976</oasis:entry>  
         <oasis:entry colname="col4">Slope 1977–2007</oasis:entry>  
         <oasis:entry colname="col5">Test statistic</oasis:entry>  
         <oasis:entry colname="col6"><inline-formula><mml:math id="M120" display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> value</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3">(standard error)</oasis:entry>  
         <oasis:entry colname="col4">(standard error)</oasis:entry>  
         <oasis:entry colname="col5"/>  
         <oasis:entry colname="col6"/>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">SST</oasis:entry>  
         <oasis:entry colname="col2">CHL</oasis:entry>  
         <oasis:entry colname="col3"><inline-formula><mml:math id="M121" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.121 (0.071)</oasis:entry>  
         <oasis:entry colname="col4"><inline-formula><mml:math id="M122" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.217 (0.052)</oasis:entry>  
         <oasis:entry colname="col5">1.095</oasis:entry>  
         <oasis:entry colname="col6">0.279</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">PP</oasis:entry>  
         <oasis:entry colname="col3"><inline-formula><mml:math id="M123" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.033 (0.012)<inline-formula><mml:math id="M124" display="inline"><mml:msup><mml:mi/><mml:mtext>b</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col4"><inline-formula><mml:math id="M125" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.022 (0.012)</oasis:entry>  
         <oasis:entry colname="col5"><inline-formula><mml:math id="M126" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.666</oasis:entry>  
         <oasis:entry colname="col6">0.508</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">PHY</oasis:entry>  
         <oasis:entry colname="col3"><inline-formula><mml:math id="M127" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.028 (0.025)</oasis:entry>  
         <oasis:entry colname="col4"><inline-formula><mml:math id="M128" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.069 (0.018)</oasis:entry>  
         <oasis:entry colname="col5">1.345</oasis:entry>  
         <oasis:entry colname="col6">0.185</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">ZOO</oasis:entry>  
         <oasis:entry colname="col3"><inline-formula><mml:math id="M129" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.002 (0.006)</oasis:entry>  
         <oasis:entry colname="col4"><inline-formula><mml:math id="M130" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.018 (0.005)</oasis:entry>  
         <oasis:entry colname="col5">2.034</oasis:entry>  
         <oasis:entry colname="col6"><bold>0.048</bold></oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry namest="col1" nameend="col6" align="center">MEDUSA </oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">Forcing</oasis:entry>  
         <oasis:entry colname="col2">Response</oasis:entry>  
         <oasis:entry colname="col3">Slope 1957–1976</oasis:entry>  
         <oasis:entry colname="col4">Slope 1977–2007</oasis:entry>  
         <oasis:entry colname="col5">Test statistic</oasis:entry>  
         <oasis:entry colname="col6"><inline-formula><mml:math id="M131" display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> value</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3">(standard error)</oasis:entry>  
         <oasis:entry colname="col4">(standard error)</oasis:entry>  
         <oasis:entry colname="col5"/>  
         <oasis:entry colname="col6"/>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">SST</oasis:entry>  
         <oasis:entry colname="col2">CHL</oasis:entry>  
         <oasis:entry colname="col3">0.002 (0.006)</oasis:entry>  
         <oasis:entry colname="col4"><inline-formula><mml:math id="M132" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.013 (0.007)</oasis:entry>  
         <oasis:entry colname="col5">1.476</oasis:entry>  
         <oasis:entry colname="col6">0.146</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">PP</oasis:entry>  
         <oasis:entry colname="col3">0.019 (0.004)</oasis:entry>  
         <oasis:entry colname="col4">0.020 (0.005)</oasis:entry>  
         <oasis:entry colname="col5"><inline-formula><mml:math id="M133" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.129</oasis:entry>  
         <oasis:entry colname="col6">0.898</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">PHY</oasis:entry>  
         <oasis:entry colname="col3">0.014 (0.004)</oasis:entry>  
         <oasis:entry colname="col4">0.006 (0.004)</oasis:entry>  
         <oasis:entry colname="col5">1.458</oasis:entry>  
         <oasis:entry colname="col6">0.151</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">ZOO</oasis:entry>  
         <oasis:entry colname="col3">0.039 (0.007)</oasis:entry>  
         <oasis:entry colname="col4">0.027 (0.007)<inline-formula><mml:math id="M134" display="inline"><mml:msup><mml:mi/><mml:mtext>b</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col5">1.132</oasis:entry>  
         <oasis:entry colname="col6">0.263</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table><table-wrap-foot><p id="d1e3849"><inline-formula><mml:math id="M111" display="inline"><mml:msup><mml:mi/><mml:mtext>a</mml:mtext></mml:msup></mml:math></inline-formula> Residuals not normally distributed (Lilliefors test, 5 % critical
level).
<inline-formula><mml:math id="M112" display="inline"><mml:msup><mml:mi/><mml:mtext>b</mml:mtext></mml:msup></mml:math></inline-formula> Residual variance not constant (Breusch Pagan test, 5 % critical
level)</p></table-wrap-foot></table-wrap>

</sec>
<sec id="Ch1.S4" sec-type="conclusions">
  <title>Discussion and conclusions</title>
      <p id="d1e4433">Using the Gulf of Alaska as a case study, our results demonstrate the
usefulness of OBGC models to infer the chain of events responsible for
regime shifts, especially in regions where observations are scarce. Although
there are many definitions of regime shifts in the literature, they can be
generally described as an abrupt change (e.g. from one year to the next)
that occurs across both physical and biological parts of the ecosystem.
Therefore, to determine if a regime shift has occurred in the five OBGC
models tested here the shift has to be traceable from physical parameters
through to biological parameters. With the change-point detection method
used here, we found statistically significant shifts in the late 1970s in
the Gulf of Alaska simulated in five OBGC models. A shift in model SST
occurred in 1976 and matched a shift in observed SST. This abrupt change in
SST was followed by an overall decrease in nutrients and productivity. The
three OBGC models simulating an abrupt change in 1977 in PC1 (i.e. HadOCC,
DiatHadOCC and MEDUSA) are consistent in the direction of change (Fig. 4).
The decrease in nutrients after 1977 seems to be the dominant driver in the
reduction in productivity and outweighs changes due to fluctuations in light
availability. The dominance of declining nutrients in explaining the
variability in the principal components of HadOCC, Diat-HadOCC and MEDUSA,
supports this hypothesis.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F6"><caption><p id="d1e4438">Relationships matrix between simulated sea surface
temperature (SST) and the biological variables over the Gulf of Alaska
region. Columns represent different models (HadOCC, DiatHadOCC and MEDUSA)
and rows represent different biological variables (surface chlorophyll
(CHL), integrated primary production (PP), total surface phytoplankton (PHY)
and zooplankton biomass (ZOO)). Linear relationships are inferred for the
periods 1957–1976, 1977–2007 and 1957–2007 using least square regression.
Table 5 presents test results on the similarity of these relationships.</p></caption>
        <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://bg.copernicus.org/articles/13/4533/2016/bg-13-4533-2016-f06.pdf"/>

      </fig>

      <p id="d1e4447">Previous studies have linked the late 1970s shift in the North Pacific with
the PDO, which switched from a negative to a positive state in 1976/77
(Mantua et al., 1997). The PDO fluctuations have been suggested to exhibit a
red noise response to atmospheric noise and ENSO events (Newman et al.,
2003), thereby raising the possibility of a link between ENSO and the North
Pacific shift in the late 1970s. Nevertheless, the PDO (and implicitly ENSO)
alone is not enough to characterize the North Pacific climate (Bond et al.,
2003). Alternatively, the North Pacific Gyre Oscillation (NPGO) has been
suggested as a global-scale mode of variability that plays an important role
in decadal changes in marine ecosystems (DiLorenzo et al., 2008). For
example, in the California Current, the PDO correlates with SST while NPGO
is more closely related to variability in salinity, nutrient and primary
production (DiLorenzo et al., 2008). Thus, if both the PDO and NPGO
fluctuations drive changes in the North Pacific climate and ecosystem
functioning, the question arises whether either or both of these indices
exhibit a shift at a similar time. Underscoring some of the conclusions of
the prior work discussed above, the shift in 1976/77 manifests in the PDO
index, but notably we find no significant shifts in the multivariate ENSO
index or the NPGO index. Clearly, by detecting a shift in the late 1970s in
PDO only we cannot conclusively tie the PDO and untie the NPGO and ENSO to
the shift in climate and ecosystem dynamics of the Gulf of Alaska. However,
these corresponding changes are an important piece of information to future
work aimed at determining causal mechanisms, mode of teleconnection and
coupled physical/biogeochemical dynamics that link global climate patterns
to ocean fertility of the Gulf of Alaska.</p>
      <p id="d1e4450">In conclusion, the 1977 regime shift in the Gulf of Alaska was observed in
sea surface temperature and in the abundance of a range of commercial fish
species (McGowan  et al., 1998). Here, we infer the behaviour of the nutrients
and lower trophic levels using OBGC models, and the relationship of these
changes to physical variables that are plausible drivers. Our novel approach
based on change-point detection offers a helpful framework to evaluate
previous modelling studies that have attempted to reproduce the extent of
changes from physics to biology for the late 1970s shift in the Gulf of
Alaska (e.g. Polovina et al., 1995; Haigh et al., 2001; Capotondi et al.,
2005; Alexander et al., 2008). For example, Haigh et al. (2001) used the
Miami isopycnic coordinate ocean model combined with an ecosystem model of
four compartments (Denman and Peña, 1999) to show that a year-round deepening
of the mixed-layer depth after 1976 led to a slight decrease in nutrients
and phytoplankton as well as zooplankton biomass. These findings are broadly
consistent with the model simulations analysed here. Other studies instead
suggest that the MLD shoaled after 1977 resulting in increased plankton
production in the region. This is the case in the Polovina et al. (1995)
study, which suggested that shoaling in the spring/winter MLD led to
increased productivity in a plankton population dynamics model. More
recently, Alexander et al. (2008) used the National Center for Atmospheric
Research Climate System Model Ocean Model (NCOM) combined with a biological
model that contains 10 compartments (Chai et al., 2002) to simulate the
chain of events in the region. In that study, an increase in SST simulated
in the late 1970s is accompanied by a shoaling in the winter mixed-layer
depth, giving rise to an early spring increase in primary production,
phytoplankton and zooplankton biomass followed by a late spring decline in
both phytoplankton and zooplankton biomass. Despite the caveat that we are
analysing annual mean time series it is important to point out the
contradictory direction of change in mixed-layer depth. Possibly reconciling
this discrepancy, Capotondi et al. (2005) suggest, based on NCOM model
simulations, a deepening trend in MLD in a broad band along the coast and
shoaling in the central part of the Gulf of Alaska. Thus, the comparison of
the various attempts to simulate the late 1970s regime shift of the Gulf of
Alaska raises the possibility that the observed abrupt and spatially
coherent ecosystem change was actually caused by a previously unappreciated
heterogeneous set of environmental changes with distinct spatial pattern and
timing in the annual cycle. If so, the inherent assumption underpinning our
own and previous work to understand the Gulf of Alaska ecosystem shift as a
single mechanistic causal sequence may be overly simplistic. Consequently,
future analysis aimed at spatial and temporal heterogeneity of abrupt
regional ecosystem change has the potential to greatly improve our
understanding of the underlying dynamics and the vulnerability of marine
ecosystems to abrupt future changes.</p>
      <p id="d1e4454">A second major outcome of this study involves the role of model complexity
in determining a system's propensity for abrupt ecosystem change. All the
OBGC models used in this study have the same underlying physical model, and
were run with the same initial conditions and forcing fields. Their
performance in terms of a fit to observations has been assessed globally in
a previous study by Kwiatkowski et al. (2014), showing that all models have
skills in simulating some variables, but simpler models were broadly closer
to observations overall. In the Gulf of Alaska, the five models
systematically differ in nutrient and biological responses as a function of
model ecosystem complexity. Simple to intermediate complexity models such as
HadOCC, Diat-HadOCC, and MEDUSA simulate a shift in the late 1970s, which
manifests as an abrupt change in SST and many nutrients and biological
parameters. As the model complexity increases to PlankTOM10 and ERSEM, these
changes are mostly in the same direction but become less abrupt. The simpler
models have fewer plankton groups responding to environmental changes (both
HadOCC and Diat-HadOCC have one zooplankton group, and Diat-HadOCC has two
phytoplankton groups), which might explain a more direct response than a
model with a larger number of plankton groups interacting with each other.
More complex models could potentially unveil shifts in the community
structure (i.e. increase of a certain type of plankton and decrease of
another one), as regime shifts can affect different species in opposite ways
(Benson and Trites, 2002). Feedbacks and interactions between groups in the
models are in need of thorough exploration to determine how they affect the
simulation of observed regime shifts. Such differences between model results
raise the question as to what degree of model complexity is needed to
appropriately simulate the complexity of regime shifts in the real world.
Extremely simple models are easy to interpret but may not be able to
reproduce realistic behaviour, while too much complexity will lead to
uncertainty and problems in interpretation of the model (Allen et al.,
2010). Given the observed differences between models, our results suggest
caution on relying on a single “ultimate” model for understanding regime
shifts behaviour and rather favour multiple lower to intermediate complexity
models, as recommended by Fulton et al. (2003). However, our results should
not be generalized too easily, as we focused uniquely on the Gulf of Alaska
region here. More complex models could outperform simple models in different
ecosystems. For example, higher complexity models have been suggested to be
more portable (i.e. ability to perform well in diverse regions and physical
settings) in a comparative study focusing on the equatorial Pacific and
Arabian Sea (Friedrichs et al., 2007). Future work should involve a regime
shift analysis in several ecosystems using models with traceable complexity.
Furthermore, an ensemble approach to quantify the effects of model and
internal variability uncertainty in regime shift detection would be
beneficial.</p>
      <p id="d1e4457">Our analysis suggests that the Gulf of Alaska regime shift is consistent
with a linear response to physical forcings on lower trophic levels, showing
a bottom-up response due to changes in the physical environment controlled
via nutrient limitation, with a potential amplified response from ZOO (only
in HadOCC and Diat-HadOCC). This result is in agreement with the linear
tracking window hypothesis (Hsieh and Ohman, 2006), which suggests that some
populations can respond linearly to abrupt changes in physical forcing, as
opposed to an amplified nonlinear response to small changes in forcing (e.g.
Scheffer  et al., 2009). However, it must be noted that our analysis is
lacking top-down controls from upper trophic levels beyond zooplankton, and
thus only partly resolves possible explanations for the observed regime
shifts in the Gulf of Alaska. Many drivers (and their synergistic effects)
may combine to fully explain regime shifts (Lindegren  et al., 2012; Litzow  et
al., 2014). Models including upper trophic levels able to simulate regime
shifts would also be beneficial to better understand the mechanisms leading
to the shift and estimate critical thresholds.</p>
      <p id="d1e4460">Finally, beyond model complexity and the spatial and temporal resolution at
which the output is analysed, the state-of-the-art in statistical techniques
for regime shift detection is an active area of research. Here we employ an
approach to detect shifts and distinguish them from a long-term trend and
background red noise, i.e. evaluate if the shift is unusually large given
the fluctuations that would be expected in the presence of autocorrelation
and/or a trend (Beaulieu  et al., 2012), which is an improvement over previous
methodologies. A main current limitation of this methodology is the ability
to detect at most one shift and in one time series at a time (univariate),
but work to extend the methodology to detect multiple shifts in a
multivariate setting is under way. Furthermore, we distinguish against a
background of red noise, which is assumed constant through the time series,
but the presence of changes in the red noise through time could affect the
results. For example, a recent study suggests a “reddening” of the PDO and
North Pacific SST as an explanation for occurrences of abrupt changes in the
North Pacific ecosystem (Boulton and Lenton, 2015). However, this is
unlikely to affect our results given the timescale (annual means) and
length of the time series (51 years) used in this study. Further, we suggest
here that analysis of the forcing–response relationship helps to distinguish
between a regime shift with a linear response to a shift in forcing, and a
nonlinear response after crossing a forcing threshold, as originally
proposed by Bestelmeyer  et al. (2011). Here we used a test that is based on a
quantitative comparison of the forcing–response relationship before and
after the shift. This approach can be used to detect other marine or
terrestrial regime shifts and distinguish between a linear and a nonlinear
response to external forcing. For management purposes, distinguishing
between these two types of forcing–response relationship producing regime
shifts is critical, as they will lead to different management and policy
incentives (Kelly  et al., 2015). For example, a routine monitoring of
threshold-based systems leads to better management outcomes than
“threshold-blind” management, i.e. when ignoring the possibility of a
threshold and assuming a linear forcing–response relationship (Kelly  et al.,
2015).</p>
</sec>
<sec id="Ch1.S5">
  <title>Data availability</title>
      <p id="d1e4470">The outputs from five ocean biogeochemical models averaged over the Gulf of Alaska are available as a Supplement to this article.
Observed sea surface temperature data were extracted from the Extended Reconstructed Sea Surface Temperature (ERSST) dataset
(version 3b; Smith and Reynolds, 2003; Smith et al., 2008) downloaded from <uri>https://www.ncdc.noaa.gov/ersst/</uri>.
The Pacific Decadal Oscillation index (Mantua et al., 1997) was downloaded from <uri>http://www.atmos.washington.edu/~mantua/abst.PDO.html</uri>.
The Multivariate El Niño Southern Oscillation Index (Wolter and Timlin, 1998) was downloaded from <uri>http://www.esrl.noaa.gov/psd/enso/mei/</uri>
and the North Pacific Gyre Oscillation index (DiLorenzo et al., 2008) was downloaded from <uri>http://www.o3d.org/npgo/npgo.php</uri>.</p><?xmltex \hack{\clearpage}?>
</sec>

      
      </body>
    <back><app-group>

<app id="App1.Ch1.S1">
  <title/>
      <p id="d1e4494">This appendix presents the results of the principal component analysis and
change-point analysis on PC1 of each model excluding the physical parameters
(SST and MLD).</p>

<?xmltex \floatpos{h!}?><table-wrap id="App1.Ch1.T1"><?xmltex \hack{\hsize\textwidth}?><caption><p id="d1e4501">Results from change-point detection analysis on the first
principal component (PC1) of each model. Years in bold have a significant
shift (<inline-formula><mml:math id="M135" display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> value &lt; 0.05).</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="6">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:colspec colnum="6" colname="col6" align="right"/>
     <oasis:thead>
       <oasis:row>  
         <oasis:entry colname="col1">Model</oasis:entry>  
         <oasis:entry colname="col2">Shift</oasis:entry>  
         <oasis:entry colname="col3">Shift type</oasis:entry>  
         <oasis:entry colname="col4">SIC</oasis:entry>  
         <oasis:entry colname="col5">SIC</oasis:entry>  
         <oasis:entry colname="col6"><inline-formula><mml:math id="M140" display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> value</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">year</oasis:entry>  
         <oasis:entry colname="col3"/>  
         <oasis:entry colname="col4">(Null model)</oasis:entry>  
         <oasis:entry colname="col5"/>  
         <oasis:entry colname="col6"/>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>  
         <oasis:entry colname="col1">HadOCC</oasis:entry>  
         <oasis:entry colname="col2"><bold>1977</bold></oasis:entry>  
         <oasis:entry colname="col3">mean</oasis:entry>  
         <oasis:entry colname="col4">176.15</oasis:entry>  
         <oasis:entry colname="col5">220.43</oasis:entry>  
         <oasis:entry colname="col6">&lt; 0.01<inline-formula><mml:math id="M141" display="inline"><mml:msup><mml:mi/><mml:mtext>a, c</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">DiatHadOCC</oasis:entry>  
         <oasis:entry colname="col2"><bold>1976</bold></oasis:entry>  
         <oasis:entry colname="col3">mean</oasis:entry>  
         <oasis:entry colname="col4">181.69</oasis:entry>  
         <oasis:entry colname="col5">236.08</oasis:entry>  
         <oasis:entry colname="col6">&lt; 0.01<inline-formula><mml:math id="M142" display="inline"><mml:msup><mml:mi/><mml:mtext>c</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">MEDUSA</oasis:entry>  
         <oasis:entry colname="col2"><bold>1978</bold></oasis:entry>  
         <oasis:entry colname="col3">trend and intercept</oasis:entry>  
         <oasis:entry colname="col4">175.85</oasis:entry>  
         <oasis:entry colname="col5">205.84</oasis:entry>  
         <oasis:entry colname="col6">&lt; 0.01</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">PlankTOM10</oasis:entry>  
         <oasis:entry colname="col2">1987</oasis:entry>  
         <oasis:entry colname="col3">intercept</oasis:entry>  
         <oasis:entry colname="col4">133.19</oasis:entry>  
         <oasis:entry colname="col5">144.83</oasis:entry>  
         <oasis:entry colname="col6">0.19<inline-formula><mml:math id="M143" display="inline"><mml:msup><mml:mi/><mml:mtext>c</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">ERSEM</oasis:entry>  
         <oasis:entry colname="col2">1987</oasis:entry>  
         <oasis:entry colname="col3">intercept</oasis:entry>  
         <oasis:entry colname="col4">188.46</oasis:entry>  
         <oasis:entry colname="col5">192.14</oasis:entry>  
         <oasis:entry colname="col6">0.64<inline-formula><mml:math id="M144" display="inline"><mml:msup><mml:mi/><mml:mtext>c</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table><table-wrap-foot><p id="d1e4511"><inline-formula><mml:math id="M136" display="inline"><mml:msup><mml:mi/><mml:mtext>a</mml:mtext></mml:msup></mml:math></inline-formula> Residuals not normally distributed (Lilliefors test, 5 % critical
level).
<inline-formula><mml:math id="M137" display="inline"><mml:msup><mml:mi/><mml:mtext>b</mml:mtext></mml:msup></mml:math></inline-formula> Residual variance not constant (Fisher test, 5 % critical
level).
<inline-formula><mml:math id="M138" display="inline"><mml:msup><mml:mi/><mml:mtext>c</mml:mtext></mml:msup></mml:math></inline-formula> Residuals not independent (Durbin-Watson test, 5 % critical level):
the Monte Carlo simulations to estimate the <inline-formula><mml:math id="M139" display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> value incorporates the
first-order autocorrelation of the residuals.</p></table-wrap-foot></table-wrap>

<?xmltex \floatpos{h!}?><table-wrap id="App1.Ch1.T2"><?xmltex \hack{\hsize\textwidth}?><caption><p id="d1e4766">Results of the principal component analysis: percentage
of variance explained by the first principal component (PC1) and relative
contributions of the different variables to this component.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="9">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:colspec colnum="6" colname="col6" align="right"/>
     <oasis:colspec colnum="7" colname="col7" align="right"/>
     <oasis:colspec colnum="8" colname="col8" align="right"/>
     <oasis:colspec colnum="9" colname="col9" align="right"/>
     <oasis:thead>
       <oasis:row>  
         <oasis:entry colname="col1">Model</oasis:entry>  
         <oasis:entry colname="col2">Variance</oasis:entry>  
         <oasis:entry rowsep="1" namest="col3" nameend="col9" align="center">Relative contribution (%) </oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">explained (%)</oasis:entry>  
         <oasis:entry colname="col3">CHL</oasis:entry>  
         <oasis:entry colname="col4">PP</oasis:entry>  
         <oasis:entry colname="col5">PHY</oasis:entry>  
         <oasis:entry colname="col6">ZOO</oasis:entry>  
         <oasis:entry colname="col7">DIN</oasis:entry>  
         <oasis:entry colname="col8">FE</oasis:entry>  
         <oasis:entry colname="col9">SI</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>  
         <oasis:entry colname="col1">HadOCC</oasis:entry>  
         <oasis:entry colname="col2">77.13</oasis:entry>  
         <oasis:entry colname="col3">22.62</oasis:entry>  
         <oasis:entry colname="col4">13.93</oasis:entry>  
         <oasis:entry colname="col5">22.70</oasis:entry>  
         <oasis:entry colname="col6">19.67</oasis:entry>  
         <oasis:entry colname="col7">21.09</oasis:entry>  
         <oasis:entry colname="col8">–</oasis:entry>  
         <oasis:entry colname="col9">–</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">DiatHadOCC</oasis:entry>  
         <oasis:entry colname="col2">74.90</oasis:entry>  
         <oasis:entry colname="col3">15.60</oasis:entry>  
         <oasis:entry colname="col4">14.52</oasis:entry>  
         <oasis:entry colname="col5">15.74</oasis:entry>  
         <oasis:entry colname="col6">15.23</oasis:entry>  
         <oasis:entry colname="col7">13.68</oasis:entry>  
         <oasis:entry colname="col8">14.50</oasis:entry>  
         <oasis:entry colname="col9">10.74</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">MEDUSA</oasis:entry>  
         <oasis:entry colname="col2">45.29</oasis:entry>  
         <oasis:entry colname="col3">15.34</oasis:entry>  
         <oasis:entry colname="col4">13.30</oasis:entry>  
         <oasis:entry colname="col5">15.38</oasis:entry>  
         <oasis:entry colname="col6">12.68</oasis:entry>  
         <oasis:entry colname="col7">17.26</oasis:entry>  
         <oasis:entry colname="col8">12.34</oasis:entry>  
         <oasis:entry colname="col9">13.70</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">PlankTOM10</oasis:entry>  
         <oasis:entry colname="col2">79.37</oasis:entry>  
         <oasis:entry colname="col3">16.52</oasis:entry>  
         <oasis:entry colname="col4">16.44</oasis:entry>  
         <oasis:entry colname="col5">16.85</oasis:entry>  
         <oasis:entry colname="col6">16.16</oasis:entry>  
         <oasis:entry colname="col7">16.67</oasis:entry>  
         <oasis:entry colname="col8">1.71</oasis:entry>  
         <oasis:entry colname="col9">15.64</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">ERSEM</oasis:entry>  
         <oasis:entry colname="col2">61.99</oasis:entry>  
         <oasis:entry colname="col3">14.77</oasis:entry>  
         <oasis:entry colname="col4">16.84</oasis:entry>  
         <oasis:entry colname="col5">9.21</oasis:entry>  
         <oasis:entry colname="col6">14.30</oasis:entry>  
         <oasis:entry colname="col7">11.95</oasis:entry>  
         <oasis:entry colname="col8">17.01</oasis:entry>  
         <oasis:entry colname="col9">15.91</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

<?xmltex \hack{\clearpage}?>
</app>

<app id="App1.Ch1.S2">
  <title> </title>
      <p id="d1e5005">This appendix presents the results of the change-point analysis for all
parameters simulated from the five models. The physical parameters (SST and
MLD) are omitted here as they are presented in Fig. 3. The chosen model for
each variable and each OBGC model is presented in Table B1.</p>

      <?xmltex \floatpos{h!}?><fig id="App1.Ch1.F1"><caption><p id="d1e5010">Time series of <bold>(a)</bold> surface chlorophyll, <bold>(b)</bold> integrated
primary production, <bold>(c)</bold> total surface phytoplankton, <bold>(d)</bold> zooplankton biomass
and <bold>(e)</bold> surface dissolved inorganic nitrogen simulated with the
HadOCC model and averaged over the Gulf of Alaska region. The
dotted lines represent the statistical model selected.</p></caption>
        <?xmltex \hack{\hsize\textwidth}?>
        <?xmltex \igopts{width=256.074803pt}?><graphic xlink:href="https://bg.copernicus.org/articles/13/4533/2016/bg-13-4533-2016-f07.pdf"/>

      </fig>

      <?xmltex \floatpos{t}?><fig id="App1.Ch1.F2" specific-use="star"><caption><p id="d1e5038">Time series of <bold>(a)</bold> surface chlorophyll, <bold>(b)</bold> integrated
primary production, <bold>(c)</bold> total surface phytoplankton, <bold>(d)</bold> zooplankton biomass
and <bold>(e)</bold> surface dissolved inorganic nitrogen, <bold>(f)</bold> silica and <bold>(g)</bold> iron simulated
with the DiatHadOCC model and averaged over the Gulf of Alaska
region. The dotted lines represent the statistical model selected.</p></caption>
        <?xmltex \igopts{width=256.074803pt}?><graphic xlink:href="https://bg.copernicus.org/articles/13/4533/2016/bg-13-4533-2016-f08.pdf"/>

      </fig>

      <?xmltex \floatpos{t}?><fig id="App1.Ch1.F3" specific-use="star"><caption><p id="d1e5072">Time series of <bold>(a)</bold> surface chlorophyll, <bold>(b)</bold> integrated
primary production, <bold>(c)</bold> total surface phytoplankton, <bold>(d)</bold> zooplankton biomass
and <bold>(e)</bold> surface dissolved inorganic nitrogen, <bold>(f)</bold> silica and <bold>(g)</bold> iron simulated
with the MEDUSA model and averaged over the Gulf of Alaska region.
The dotted lines represent the statistical model selected.</p></caption>
        <?xmltex \igopts{width=256.074803pt}?><graphic xlink:href="https://bg.copernicus.org/articles/13/4533/2016/bg-13-4533-2016-f09.pdf"/>

      </fig>

      <?xmltex \floatpos{t}?><fig id="App1.Ch1.F4" specific-use="star"><caption><p id="d1e5105">Time series of <bold>(a)</bold> surface chlorophyll,   <bold>(b)</bold> integrated
primary production, <bold>(c)</bold> total surface phytoplankton, <bold>(d)</bold> zooplankton biomass
and <bold>(e)</bold> surface dissolved inorganic nitrogen, <bold>(f)</bold> silica and <bold>(g)</bold> iron simulated
with the PlankTOM10 model and averaged over the Gulf of Alaska
region. The dotted lines represent the statistical model selected.</p></caption>
        <?xmltex \igopts{width=256.074803pt}?><graphic xlink:href="https://bg.copernicus.org/articles/13/4533/2016/bg-13-4533-2016-f10.pdf"/>

      </fig>

      <?xmltex \floatpos{t}?><fig id="App1.Ch1.F5" specific-use="star"><caption><p id="d1e5138">Time series of <bold>(a)</bold> surface chlorophyll, <bold>(b)</bold> integrated
primary production, <bold>(c)</bold> total surface phytoplankton, <bold>(d)</bold> zooplankton
biomass
and <bold>(e)</bold> surface dissolved inorganic nitrogen,   <bold>(f)</bold> silica and <bold>(g)</bold> iron simulated
with the ERSEM model and averaged over the Gulf of Alaska region.
The dotted lines represent the statistical model selected.</p></caption>
        <?xmltex \igopts{width=284.527559pt}?><graphic xlink:href="https://bg.copernicus.org/articles/13/4533/2016/bg-13-4533-2016-f11.pdf"/>

      </fig>

<?xmltex \floatpos{t}?><table-wrap id="App1.Ch1.T3" specific-use="star"><caption><p id="d1e5172">Results from change-point detection analysis for all
observational and modelled time series. Years in bold have a significant
shift (<inline-formula><mml:math id="M145" display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> value &lt; 0.05).</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="7">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:colspec colnum="4" colname="col4" align="left"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:colspec colnum="6" colname="col6" align="right"/>
     <oasis:colspec colnum="7" colname="col7" align="right"/>
     <oasis:thead>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">Parameter</oasis:entry>  
         <oasis:entry colname="col3">Shift</oasis:entry>  
         <oasis:entry colname="col4">Shift type</oasis:entry>  
         <oasis:entry colname="col5">SIC</oasis:entry>  
         <oasis:entry colname="col6">SIC</oasis:entry>  
         <oasis:entry colname="col7"><inline-formula><mml:math id="M150" display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> value</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2"/>  
         <oasis:entry colname="col3">year</oasis:entry>  
         <oasis:entry colname="col4"/>  
         <oasis:entry colname="col5">(Null model)</oasis:entry>  
         <oasis:entry colname="col6"/>  
         <oasis:entry colname="col7"/>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>  
         <oasis:entry colname="col1">Observations</oasis:entry>  
         <oasis:entry colname="col2">SST</oasis:entry>  
         <oasis:entry colname="col3"><bold>1976</bold></oasis:entry>  
         <oasis:entry colname="col4">trend and intercept</oasis:entry>  
         <oasis:entry colname="col5">52.79</oasis:entry>  
         <oasis:entry colname="col6">70.63</oasis:entry>  
         <oasis:entry colname="col7">&lt; 0.01</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">PDO</oasis:entry>  
         <oasis:entry colname="col3"><bold>1976</bold></oasis:entry>  
         <oasis:entry colname="col4">intercept</oasis:entry>  
         <oasis:entry colname="col5">104.94</oasis:entry>  
         <oasis:entry colname="col6">120.11</oasis:entry>  
         <oasis:entry colname="col7">0.02</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">ENSO</oasis:entry>  
         <oasis:entry colname="col3">1976</oasis:entry>  
         <oasis:entry colname="col4">mean</oasis:entry>  
         <oasis:entry colname="col5">116.04</oasis:entry>  
         <oasis:entry colname="col6">120.42</oasis:entry>  
         <oasis:entry colname="col7">0.11</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">NPGO</oasis:entry>  
         <oasis:entry colname="col3">1998</oasis:entry>  
         <oasis:entry colname="col4">trend and intercept</oasis:entry>  
         <oasis:entry colname="col5">137.79</oasis:entry>  
         <oasis:entry colname="col6">147.12</oasis:entry>  
         <oasis:entry colname="col7">0.28<inline-formula><mml:math id="M151" display="inline"><mml:msup><mml:mi/><mml:mtext>c</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">All models</oasis:entry>  
         <oasis:entry colname="col2">SST</oasis:entry>  
         <oasis:entry colname="col3"><bold>1976</bold></oasis:entry>  
         <oasis:entry colname="col4">trend and intercept</oasis:entry>  
         <oasis:entry colname="col5">58.39</oasis:entry>  
         <oasis:entry colname="col6">74.15</oasis:entry>  
         <oasis:entry colname="col7">&lt; 0.01</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">MLD</oasis:entry>  
         <oasis:entry colname="col3">1987</oasis:entry>  
         <oasis:entry colname="col4">intercept</oasis:entry>  
         <oasis:entry colname="col5">230.22</oasis:entry>  
         <oasis:entry colname="col6">234.25</oasis:entry>  
         <oasis:entry colname="col7">0.25</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">HadOCC</oasis:entry>  
         <oasis:entry colname="col2">CHL</oasis:entry>  
         <oasis:entry colname="col3"><bold>1977</bold></oasis:entry>  
         <oasis:entry colname="col4">mean</oasis:entry>  
         <oasis:entry colname="col5"><inline-formula><mml:math id="M152" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>138.40</oasis:entry>  
         <oasis:entry colname="col6"><inline-formula><mml:math id="M153" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>108.32</oasis:entry>  
         <oasis:entry colname="col7">&lt; 0.01<inline-formula><mml:math id="M154" display="inline"><mml:msup><mml:mi/><mml:mtext>c</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">PP</oasis:entry>  
         <oasis:entry colname="col3"><bold>1991</bold></oasis:entry>  
         <oasis:entry colname="col4">intercept</oasis:entry>  
         <oasis:entry colname="col5"><inline-formula><mml:math id="M155" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>264.06</oasis:entry>  
         <oasis:entry colname="col6"><inline-formula><mml:math id="M156" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>235.87</oasis:entry>  
         <oasis:entry colname="col7">&lt; 0.01<inline-formula><mml:math id="M157" display="inline"><mml:msup><mml:mi/><mml:mtext>b, c</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">PHY</oasis:entry>  
         <oasis:entry colname="col3"><bold>1977</bold></oasis:entry>  
         <oasis:entry colname="col4">mean</oasis:entry>  
         <oasis:entry colname="col5"><inline-formula><mml:math id="M158" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>211.46</oasis:entry>  
         <oasis:entry colname="col6"><inline-formula><mml:math id="M159" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>177.59</oasis:entry>  
         <oasis:entry colname="col7">&lt; 0.01<inline-formula><mml:math id="M160" display="inline"><mml:msup><mml:mi/><mml:mtext>c</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">ZOO</oasis:entry>  
         <oasis:entry colname="col3"><bold>1977</bold></oasis:entry>  
         <oasis:entry colname="col4">mean</oasis:entry>  
         <oasis:entry colname="col5"><inline-formula><mml:math id="M161" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>339.68</oasis:entry>  
         <oasis:entry colname="col6"><inline-formula><mml:math id="M162" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>315.70</oasis:entry>  
         <oasis:entry colname="col7">&lt; 0.01</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">DIN</oasis:entry>  
         <oasis:entry colname="col3"><bold>1977</bold></oasis:entry>  
         <oasis:entry colname="col4">mean</oasis:entry>  
         <oasis:entry colname="col5">139.52</oasis:entry>  
         <oasis:entry colname="col6">175.85</oasis:entry>  
         <oasis:entry colname="col7">&lt; 0.01<inline-formula><mml:math id="M163" display="inline"><mml:msup><mml:mi/><mml:mtext>c</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">DiatHadOCC</oasis:entry>  
         <oasis:entry colname="col2">CHL</oasis:entry>  
         <oasis:entry colname="col3"><bold>1976</bold></oasis:entry>  
         <oasis:entry colname="col4">mean</oasis:entry>  
         <oasis:entry colname="col5"><inline-formula><mml:math id="M164" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>44.93</oasis:entry>  
         <oasis:entry colname="col6"><inline-formula><mml:math id="M165" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>13.82</oasis:entry>  
         <oasis:entry colname="col7">&lt; 0.01</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">PP</oasis:entry>  
         <oasis:entry colname="col3"><bold>1976</bold></oasis:entry>  
         <oasis:entry colname="col4">mean</oasis:entry>  
         <oasis:entry colname="col5"><inline-formula><mml:math id="M166" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>216.45</oasis:entry>  
         <oasis:entry colname="col6"><inline-formula><mml:math id="M167" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>190.71</oasis:entry>  
         <oasis:entry colname="col7">&lt; 0.01<inline-formula><mml:math id="M168" display="inline"><mml:msup><mml:mi/><mml:mtext>c</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">PHY</oasis:entry>  
         <oasis:entry colname="col3">1976</oasis:entry>  
         <oasis:entry colname="col4">intercept</oasis:entry>  
         <oasis:entry colname="col5"><inline-formula><mml:math id="M169" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>157.13</oasis:entry>  
         <oasis:entry colname="col6"><inline-formula><mml:math id="M170" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>155.59</oasis:entry>  
         <oasis:entry colname="col7">0.53</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">ZOO</oasis:entry>  
         <oasis:entry colname="col3">1976</oasis:entry>  
         <oasis:entry colname="col4">intercept</oasis:entry>  
         <oasis:entry colname="col5"><inline-formula><mml:math id="M171" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>298.90</oasis:entry>  
         <oasis:entry colname="col6"><inline-formula><mml:math id="M172" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>297.33</oasis:entry>  
         <oasis:entry colname="col7">0.59</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">DIN</oasis:entry>  
         <oasis:entry colname="col3"><bold>1978</bold></oasis:entry>  
         <oasis:entry colname="col4">trend and intercept</oasis:entry>  
         <oasis:entry colname="col5">151.10</oasis:entry>  
         <oasis:entry colname="col6">202.7</oasis:entry>  
         <oasis:entry colname="col7">&lt; 0.01<inline-formula><mml:math id="M173" display="inline"><mml:msup><mml:mi/><mml:mtext>c</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">SI</oasis:entry>  
         <oasis:entry colname="col3"><bold>1978</bold></oasis:entry>  
         <oasis:entry colname="col4">trend and intercept</oasis:entry>  
         <oasis:entry colname="col5">167.04</oasis:entry>  
         <oasis:entry colname="col6">230.11</oasis:entry>  
         <oasis:entry colname="col7">&lt; 0.01<inline-formula><mml:math id="M174" display="inline"><mml:msup><mml:mi/><mml:mtext>c</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">FE</oasis:entry>  
         <oasis:entry colname="col3"><bold>1978</bold></oasis:entry>  
         <oasis:entry colname="col4">mean</oasis:entry>  
         <oasis:entry colname="col5"><inline-formula><mml:math id="M175" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>1035.5</oasis:entry>  
         <oasis:entry colname="col6"><inline-formula><mml:math id="M176" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>990.86</oasis:entry>  
         <oasis:entry colname="col7">&lt; 0.01<inline-formula><mml:math id="M177" display="inline"><mml:msup><mml:mi/><mml:mtext>c</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">MEDUSA</oasis:entry>  
         <oasis:entry colname="col2">CHL</oasis:entry>  
         <oasis:entry colname="col3"><bold>1997</bold></oasis:entry>  
         <oasis:entry colname="col4">intercept</oasis:entry>  
         <oasis:entry colname="col5"><inline-formula><mml:math id="M178" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>287.1</oasis:entry>  
         <oasis:entry colname="col6"><inline-formula><mml:math id="M179" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>274.71</oasis:entry>  
         <oasis:entry colname="col7">0.01</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">PP</oasis:entry>  
         <oasis:entry colname="col3"><bold>1991</bold></oasis:entry>  
         <oasis:entry colname="col4">intercept</oasis:entry>  
         <oasis:entry colname="col5"><inline-formula><mml:math id="M180" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>308.90</oasis:entry>  
         <oasis:entry colname="col6"><inline-formula><mml:math id="M181" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>293.98</oasis:entry>  
         <oasis:entry colname="col7">0.02<inline-formula><mml:math id="M182" display="inline"><mml:msup><mml:mi/><mml:mtext>c</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">PHY</oasis:entry>  
         <oasis:entry colname="col3"><bold>1961</bold></oasis:entry>  
         <oasis:entry colname="col4">mean</oasis:entry>  
         <oasis:entry colname="col5"><inline-formula><mml:math id="M183" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>342.52</oasis:entry>  
         <oasis:entry colname="col6"><inline-formula><mml:math id="M184" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>328.88</oasis:entry>  
         <oasis:entry colname="col7">&lt; 0.01</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">ZOO</oasis:entry>  
         <oasis:entry colname="col3"><bold>1961</bold></oasis:entry>  
         <oasis:entry colname="col4">mean</oasis:entry>  
         <oasis:entry colname="col5"><inline-formula><mml:math id="M185" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>260.89</oasis:entry>  
         <oasis:entry colname="col6"><inline-formula><mml:math id="M186" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>243.23</oasis:entry>  
         <oasis:entry colname="col7">&lt; 0.01</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">DIN</oasis:entry>  
         <oasis:entry colname="col3"><bold>1978</bold></oasis:entry>  
         <oasis:entry colname="col4">trend and intercept</oasis:entry>  
         <oasis:entry colname="col5">157.02</oasis:entry>  
         <oasis:entry colname="col6">180.64</oasis:entry>  
         <oasis:entry colname="col7">&lt; 0.01<inline-formula><mml:math id="M187" display="inline"><mml:msup><mml:mi/><mml:mtext>c</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">SI</oasis:entry>  
         <oasis:entry colname="col3">1966</oasis:entry>  
         <oasis:entry colname="col4">trend and intercept</oasis:entry>  
         <oasis:entry colname="col5">201.11</oasis:entry>  
         <oasis:entry colname="col6">217.83</oasis:entry>  
         <oasis:entry colname="col7">0.09<inline-formula><mml:math id="M188" display="inline"><mml:msup><mml:mi/><mml:mtext>c</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">FE</oasis:entry>  
         <oasis:entry colname="col3">1977</oasis:entry>  
         <oasis:entry colname="col4">intercept</oasis:entry>  
         <oasis:entry colname="col5"><inline-formula><mml:math id="M189" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>946.48</oasis:entry>  
         <oasis:entry colname="col6"><inline-formula><mml:math id="M190" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>938.51</oasis:entry>  
         <oasis:entry colname="col7">0.10<inline-formula><mml:math id="M191" display="inline"><mml:msup><mml:mi/><mml:mtext>c</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">PlankTOM10</oasis:entry>  
         <oasis:entry colname="col2">CHL</oasis:entry>  
         <oasis:entry colname="col3">1978</oasis:entry>  
         <oasis:entry colname="col4">intercept</oasis:entry>  
         <oasis:entry colname="col5"><inline-formula><mml:math id="M192" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>221.06</oasis:entry>  
         <oasis:entry colname="col6"><inline-formula><mml:math id="M193" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>214.48</oasis:entry>  
         <oasis:entry colname="col7">0.24<inline-formula><mml:math id="M194" display="inline"><mml:msup><mml:mi/><mml:mtext>c</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">PP</oasis:entry>  
         <oasis:entry colname="col3"><bold>1991</bold></oasis:entry>  
         <oasis:entry colname="col4">trend and intercept</oasis:entry>  
         <oasis:entry colname="col5"><inline-formula><mml:math id="M195" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>277.74</oasis:entry>  
         <oasis:entry colname="col6"><inline-formula><mml:math id="M196" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>258.29</oasis:entry>  
         <oasis:entry colname="col7">&lt; 0.01<inline-formula><mml:math id="M197" display="inline"><mml:msup><mml:mi/><mml:mtext>b, c</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">PHY</oasis:entry>  
         <oasis:entry colname="col3">1986</oasis:entry>  
         <oasis:entry colname="col4">intercept</oasis:entry>  
         <oasis:entry colname="col5"><inline-formula><mml:math id="M198" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>1481.6</oasis:entry>  
         <oasis:entry colname="col6"><inline-formula><mml:math id="M199" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>1472.22</oasis:entry>  
         <oasis:entry colname="col7">0.18<inline-formula><mml:math id="M200" display="inline"><mml:msup><mml:mi/><mml:mtext>c</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">ZOO</oasis:entry>  
         <oasis:entry colname="col3">1988</oasis:entry>  
         <oasis:entry colname="col4">intercept</oasis:entry>  
         <oasis:entry colname="col5"><inline-formula><mml:math id="M201" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>1427.8</oasis:entry>  
         <oasis:entry colname="col6"><inline-formula><mml:math id="M202" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>1414.98</oasis:entry>  
         <oasis:entry colname="col7">0.16 <inline-formula><mml:math id="M203" display="inline"><mml:msup><mml:mi/><mml:mtext>a, b, c</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">DIN</oasis:entry>  
         <oasis:entry colname="col3">1978</oasis:entry>  
         <oasis:entry colname="col4">trend and intercept</oasis:entry>  
         <oasis:entry colname="col5">48.07</oasis:entry>  
         <oasis:entry colname="col6">62.65</oasis:entry>  
         <oasis:entry colname="col7">0.07<inline-formula><mml:math id="M204" display="inline"><mml:msup><mml:mi/><mml:mtext>c</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">SI</oasis:entry>  
         <oasis:entry colname="col3">1987</oasis:entry>  
         <oasis:entry colname="col4">intercept</oasis:entry>  
         <oasis:entry colname="col5">233.68</oasis:entry>  
         <oasis:entry colname="col6">240.68</oasis:entry>  
         <oasis:entry colname="col7">0.29<inline-formula><mml:math id="M205" display="inline"><mml:msup><mml:mi/><mml:mtext>c</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">FE</oasis:entry>  
         <oasis:entry colname="col3">1983</oasis:entry>  
         <oasis:entry colname="col4">intercept</oasis:entry>  
         <oasis:entry colname="col5"><inline-formula><mml:math id="M206" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>960.84</oasis:entry>  
         <oasis:entry colname="col6"><inline-formula><mml:math id="M207" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>954.91</oasis:entry>  
         <oasis:entry colname="col7">0.12<inline-formula><mml:math id="M208" display="inline"><mml:msup><mml:mi/><mml:mtext>a, c</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">ERSEM</oasis:entry>  
         <oasis:entry colname="col2">CHL</oasis:entry>  
         <oasis:entry colname="col3"><bold>1976</bold></oasis:entry>  
         <oasis:entry colname="col4">mean</oasis:entry>  
         <oasis:entry colname="col5"><inline-formula><mml:math id="M209" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>162.70</oasis:entry>  
         <oasis:entry colname="col6"><inline-formula><mml:math id="M210" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>151.07</oasis:entry>  
         <oasis:entry colname="col7">0.01<inline-formula><mml:math id="M211" display="inline"><mml:msup><mml:mi/><mml:mtext>c</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">PP</oasis:entry>  
         <oasis:entry colname="col3">1961</oasis:entry>  
         <oasis:entry colname="col4">trend and intercept</oasis:entry>  
         <oasis:entry colname="col5"><inline-formula><mml:math id="M212" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>211.38</oasis:entry>  
         <oasis:entry colname="col6"><inline-formula><mml:math id="M213" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>207.73</oasis:entry>  
         <oasis:entry colname="col7">0.49<inline-formula><mml:math id="M214" display="inline"><mml:msup><mml:mi/><mml:mtext>b, c</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">PHY</oasis:entry>  
         <oasis:entry colname="col3"><bold>2002</bold></oasis:entry>  
         <oasis:entry colname="col4">mean</oasis:entry>  
         <oasis:entry colname="col5">95.40</oasis:entry>  
         <oasis:entry colname="col6">101.6</oasis:entry>  
         <oasis:entry colname="col7">0.04</oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">ZOO</oasis:entry>  
         <oasis:entry colname="col3">1961</oasis:entry>  
         <oasis:entry colname="col4">trend and intercept</oasis:entry>  
         <oasis:entry colname="col5">175.98</oasis:entry>  
         <oasis:entry colname="col6">185.44</oasis:entry>  
         <oasis:entry colname="col7">0.07<inline-formula><mml:math id="M215" display="inline"><mml:msup><mml:mi/><mml:mtext>c</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">DIN</oasis:entry>  
         <oasis:entry colname="col3">1964</oasis:entry>  
         <oasis:entry colname="col4">trend and intercept</oasis:entry>  
         <oasis:entry colname="col5">6.58</oasis:entry>  
         <oasis:entry colname="col6">16.48</oasis:entry>  
         <oasis:entry colname="col7">0.10<inline-formula><mml:math id="M216" display="inline"><mml:msup><mml:mi/><mml:mtext>c</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">SI</oasis:entry>  
         <oasis:entry colname="col3"><bold>1991</bold></oasis:entry>  
         <oasis:entry colname="col4">intercept</oasis:entry>  
         <oasis:entry colname="col5">122.52</oasis:entry>  
         <oasis:entry colname="col6">153.74</oasis:entry>  
         <oasis:entry colname="col7">0.01<inline-formula><mml:math id="M217" display="inline"><mml:msup><mml:mi/><mml:mtext>c</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">FE</oasis:entry>  
         <oasis:entry colname="col3">1986</oasis:entry>  
         <oasis:entry colname="col4">intercept</oasis:entry>  
         <oasis:entry colname="col5"><inline-formula><mml:math id="M218" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>414.51</oasis:entry>  
         <oasis:entry colname="col6"><inline-formula><mml:math id="M219" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>412.18</oasis:entry>  
         <oasis:entry colname="col7">0.57<inline-formula><mml:math id="M220" display="inline"><mml:msup><mml:mi/><mml:mtext>c</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table><table-wrap-foot><p id="d1e5182"><inline-formula><mml:math id="M146" display="inline"><mml:msup><mml:mi/><mml:mtext>a</mml:mtext></mml:msup></mml:math></inline-formula> Residuals not normally distributed (Lilliefors test, 5 % critical
level). <inline-formula><mml:math id="M147" display="inline"><mml:msup><mml:mi/><mml:mtext>b</mml:mtext></mml:msup></mml:math></inline-formula> Residual variance not constant (Fisher test, 5 % critical level).
<inline-formula><mml:math id="M148" display="inline"><mml:msup><mml:mi/><mml:mtext>c</mml:mtext></mml:msup></mml:math></inline-formula> Residuals not independent (Durbin-Watson test, 5 % critical level):
the Monte Carlo simulations to estimate the <inline-formula><mml:math id="M149" display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> value incorporates the
first-order autocorrelation of the residuals.</p></table-wrap-foot></table-wrap>

<?xmltex \hack{\clearpage}?><supplementary-material position="anchor"><p id="d1e6739"><bold>The Supplement related to this article is available online at <inline-supplementary-material xlink:href="https://doi.org/10.5194/bg-13-4533-2016-supplement" xlink:title="zip">https://doi.org/10.5194/bg-13-4533-2016-supplement</inline-supplementary-material>.</bold></p></supplementary-material>
</app>
  </app-group><ack><title>Acknowledgements</title><p id="d1e6747">This work was funded by the UK Natural Environmental Research Council
Integrated Marine Biogeochemical Modelling Network to Support UK Earth
System Research (iMarNet) project (NE/K0011345/1). CB also acknowledges
financial support from a Marie Curie Career Integration Grant (project
631466 – TROPHYZ). We acknowledge use of the MONSooN system, a
collaborative facility supplied under the Joint Weather and Climate Research
Programme, a strategic partnership between the Met Office and the Natural
Environment Research Council. The authors would like to thank Clare Enright
for providing model runs. The authors would also like to thank Matthew Spencer, Adrian Martin and Ryan Rykaczewski for useful comments on an
earlier version of the manuscript, as well as three anonymous reviewers for
constructive comments that improved the manuscript substantially.
<?xmltex \hack{\newline}?><?xmltex \hack{\newline}?>
Edited by:  F. Chai <?xmltex \hack{\newline}?>
Reviewed by: three anonymous referees</p></ack><ref-list>
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    <!--<article-title-html>Marine regime shifts in ocean biogeochemical models: a case study in the Gulf of Alaska</article-title-html>
<abstract-html><p class="p">Regime shifts have been reported in many marine ecosystems, and are often
expressed as an abrupt change occurring in multiple physical and biological
components of the system. In the Gulf of Alaska, a regime shift in the late
1970s was observed, indicated by an abrupt increase in sea surface
temperature and major shifts in the catch of many fish species. A thorough
understanding of the extent and mechanisms leading to such regime shifts is
challenged by data paucity in time and space. We investigate the ability of
a suite of ocean biogeochemistry models of varying complexity to simulate
regime shifts in the Gulf of Alaska by examining the presence of abrupt
changes in time series of physical variables (sea surface temperature and
mixed-layer depth), nutrients and biological variables (chlorophyll, primary
productivity and plankton biomass) using change-point analysis. Our results
show that some ocean biogeochemical models are capable of simulating the
late 1970s shift, manifested as an abrupt increase in sea surface
temperature followed by an abrupt decrease in nutrients and biological
productivity. Models from low to intermediate complexity simulate an abrupt
transition in the late 1970s (i.e. a significant shift from one year to the
next) while the transition is smoother in higher complexity models. Our
study demonstrates that ocean biogeochemical models can successfully
simulate regime shifts in the Gulf of Alaska region. These models can
therefore be considered useful tools to enhance our understanding of how
changes in physical conditions are propagated from lower to upper trophic
levels.</p></abstract-html>
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