<?xml version="1.0" encoding="UTF-8"?>
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<article xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:oasis="http://docs.oasis-open.org/ns/oasis-exchange/table" dtd-version="3.0"><?xmltex \makeatother\@nolinetrue\makeatletter?>
  <front>
    <journal-meta>
<journal-id journal-id-type="publisher">BG</journal-id>
<journal-title-group>
<journal-title>Biogeosciences</journal-title>
<abbrev-journal-title abbrev-type="publisher">BG</abbrev-journal-title>
<abbrev-journal-title abbrev-type="nlm-ta">Biogeosciences</abbrev-journal-title>
</journal-title-group>
<issn pub-type="epub">1726-4189</issn>
<publisher><publisher-name>Copernicus Publications</publisher-name>
<publisher-loc>Göttingen, Germany</publisher-loc>
</publisher>
</journal-meta>

    <article-meta>
      <article-id pub-id-type="doi">10.5194/bg-13-4637-2016</article-id><title-group><article-title>The role of coccoliths in protecting <italic>Emiliania huxleyi</italic> against stressful light and UV radiation</article-title>
      </title-group><?xmltex \runningtitle{Photoprotective role of coccoliths in \textit{Emiliania huxleyi}}?><?xmltex \runningauthor{J.~Xu et al.}?>
      <contrib-group>
        <contrib contrib-type="author" corresp="no" rid="aff1 aff2">
          <name><surname>Xu</surname><given-names>Juntian</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Bach</surname><given-names>Lennart T.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-0202-3671</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Schulz</surname><given-names>Kai G.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-8481-4639</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Zhao</surname><given-names>Wenyan</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="yes" rid="aff1">
          <name><surname>Gao</surname><given-names>Kunshan</given-names></name>
          <email>ksgao@xmu.edu.cn</email>
        <ext-link>https://orcid.org/0000-0001-7365-6332</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Riebesell</surname><given-names>Ulf</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-9442-452X</ext-link></contrib>
        <aff id="aff1"><label>1</label><institution>State Key Laboratory of Marine Environmental Science, Xiamen
University, Xiamen, Fujian, 361102 China</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>Key Laboratory of Marine Biotechnology of Jiangsu Province, Huaihai
Institute of Technology, Lianyungang, <?xmltex \hack{\newline}?>Jiangsu, 222005 China</institution>
        </aff>
        <aff id="aff3"><label>3</label><institution>GEOMAR Helmholtz Centre for Ocean Research Kiel, Düsternbrooker
Weg 20, Kiel, 24105 Germany</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Kunshan Gao (ksgao@xmu.edu.cn)</corresp></author-notes><pub-date><day>18</day><month>August</month><year>2016</year></pub-date>
      
      <volume>13</volume>
      <issue>16</issue>
      <fpage>4637</fpage><lpage>4643</lpage>
      <history>
        <date date-type="received"><day>14</day><month>April</month><year>2016</year></date>
           <date date-type="rev-request"><day>28</day><month>April</month><year>2016</year></date>
           <date date-type="rev-recd"><day>7</day><month>July</month><year>2016</year></date>
           <date date-type="accepted"><day>20</day><month>July</month><year>2016</year></date>
      </history>
      <permissions>
<license license-type="open-access">
<license-p>This work is licensed under a Creative Commons Attribution 3.0 Unported License. To view a copy of this license, visit <ext-link ext-link-type="uri" xlink:href="http://creativecommons.org/licenses/by/3.0/">http://creativecommons.org/licenses/by/3.0/</ext-link></license-p>
</license>
</permissions><self-uri xlink:href="https://bg.copernicus.org/articles/13/4637/2016/bg-13-4637-2016.html">This article is available from https://bg.copernicus.org/articles/13/4637/2016/bg-13-4637-2016.html</self-uri>
<self-uri xlink:href="https://bg.copernicus.org/articles/13/4637/2016/bg-13-4637-2016.pdf">The full text article is available as a PDF file from https://bg.copernicus.org/articles/13/4637/2016/bg-13-4637-2016.pdf</self-uri>


      <abstract>
    <p>Coccolithophores are a group of phytoplankton species which cover themselves
with small scales (coccoliths) made of calcium carbonate (CaCO<inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>. The
reason why coccolithophores form these calcite platelets has been a matter of
debate for decades but has remained elusive so far. One hypothesis is that
they play a role in light or UV protection, especially in surface dwelling
species like <italic>Emiliania huxleyi</italic>, which can tolerate exceptionally high
levels of solar radiation. In this study, we tested this hypothesis by
culturing a calcified and a naked strain under different light conditions
with and without UV radiation. The coccoliths of <italic>E. huxleyi</italic> reduced
the transmission of visible radiation (400–700 nm) by 7.5 %, that of UV-A
(315–400 nm) by 14.1 % and that of UV-B (280–315 nm) by 18.4 %. Growth
rates of the calcified strain (PML B92/11) were about 2 times higher than
those of the naked strain (CCMP 2090) under indoor constant light levels in
the absence of UV radiation. When exposed to outdoor conditions (fluctuating
sunlight with UV radiation), growth rates of calcified cells were almost 3.5
times higher compared to naked cells. Furthermore, the relative electron
transport rate was 114 % higher and non-photochemical quenching (NPQ)
was 281 % higher in the calcified compared to the naked strain, implying
higher energy transfer associated with higher NPQ in the presence of
calcification. When exposed to natural solar radiation including UV
radiation, the maximal quantum yield of photosystem II was only slightly reduced
in the calcified strain but strongly reduced in the naked strain. Our results reveal
an important role of coccoliths in mitigating light and UV stress in
<italic>E. huxleyi</italic>.</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <title>Introduction</title>
      <p>Coccolithophores are a group of marine phytoplankton species which are able
to precipitate CaCO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> in the form of small calcitic scales (coccoliths)
surrounding the organic part of the cell. They contribute about 1–10 % to
marine primary production (Poulton et al., 2007) and approximately 50 % to
pelagic deep-ocean CaCO<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msub></mml:math></inline-formula> sediments (Broecker and Clark, 2009). Blooms
of coccolithophores can cover up to 8 million km<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula> of the Earth's
surface (Moore et al., 2012) and are considered to be important drivers of
biogeochemical cycling (Rost and Riebesell, 2004).</p>
      <p>Despite intense research on coccolithophore calcification and its
biogeochemical relevance during the last decade, it is still an unresolved
question why coccolithophores calcify (Young, 1994; Raven and Crawfurd,
2012). One hypothesis is that the layer of coccoliths surrounding the cell
(coccosphere) protects the organism from excess light and UV radiation. This
notion is supported by the exceptionally high light tolerance of the surface
layer dwelling species <italic>Emiliania huxleyi</italic> (Nanninga and Tyrell, 1996; Ragni et al., 2008; Gao
et al., 2009; Loebl et al., 2010).</p>
      <p>Physiological studies investigating the light tolerance of <italic>E. huxleyi</italic> showed that the
radiation wavelength matters in this context. The coccosphere does not seem
to constitute a protection against very high intensities of
photosynthetically active radiation (PAR) since noncalcifying <italic>E. huxleyi</italic> cells are
as resistant to photoinhibition as their calcifying counterparts
(Nanninga and Tyrrell, 1996). This is in clear contrast to the influence of
stressful ultraviolet radiation (UVR) on the cells where results from
different physiological experiments support a protective role of the
coccoliths (Gao et al., 2009, 2012; Guan and Gao, 2010).
Protection from UVR or high light exposures by coccoliths may either work by
physically shading intracellular organelles or by strongly scattering light, which is certainly a feature of coccolithophore blooms (Balch et al., 1996;
Voss et al., 1998). The underlying mechanisms, however, are not well
understood and warrant further investigations.</p>
      <p>UVR strongly contributes to photoinhibition of photosystem II (e.g., Hakala-Yatkin et al., 2010) and effectively inhibits repair processes (Ragni
et al., 2008). Therefore, it is likely that the coccoliths protect PSII
repair from UV inhibition. In this study we explore in more detail how
different PAR and UV radiation (280–400 nm) treatments affect calcified and
naked <italic>E. huxleyi</italic> cells. Specifically we address the question of whether the coccosphere
of <italic>E. huxleyi</italic> helps the cells to withstand stressful levels of PAR and/or UV radiation
and whether calcification influences photochemical performance.</p>
</sec>
<sec id="Ch1.S2">
  <title>Materials and methods</title>
<sec id="Ch1.S2.SS1">
  <title>Materials and pre-culture conditions</title>
      <p>Calcified <italic> E. huxleyi</italic> (PML B92/11 isolated in the Raunefjord area, Bergen, Norway) and
naked cells (CCMP 2090 isolated in the South Pacific) were used in the
experiments. Both strains were grown in triplicate cultures (300 mL square
glass bottles) at 15 <inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C in 0.2 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>m filtered natural seawater
(gathered from the Bay of Biscay) at a photon flux density of 500 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>mol photons m<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>
on a <inline-formula><mml:math display="inline"><mml:mrow><mml:mn>16</mml:mn><mml:mo>-</mml:mo><mml:mn mathvariant="normal">8</mml:mn></mml:mrow></mml:math></inline-formula> light–dark cycle. The natural seawater
medium was enriched with 64 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>mol L<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> nitrate, 4 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>mol L<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> phosphate,
<inline-formula><mml:math display="inline"><mml:mrow><mml:mi>f</mml:mi><mml:mo>/</mml:mo><mml:mn mathvariant="normal">8</mml:mn></mml:mrow></mml:math></inline-formula> concentrations of a trace metal and vitamin mixture
(Guillard and Ryther, 1962), and 10 nmol kg<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> selenium. Pre-cultures
and experimental incubations in semicontinuously diluted batch cultures
(&gt; eight generations) ensured exponential growth throughout the
experiment.</p>
</sec>
<sec id="Ch1.S2.SS2">
  <title>Experimental setup</title>
<sec id="Ch1.S2.SS2.SSS1">
  <title>Indoor growth experiments</title>
      <p>After pre-culture for at least eight generations, the cells of calcified and
naked strains were inoculated in the same glass bottles of 300 mL and
cultured under the same conditions as pre-cultures, maintaining the cell
concentrations at exponential growth within a range of 3–10 <inline-formula><mml:math display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 10<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">4</mml:mn></mml:msup></mml:math></inline-formula> cells mL<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>.</p>
</sec>
<sec id="Ch1.S2.SS2.SSS2">
  <title>Outdoor growth experiments</title>
      <p>Following the indoor growth experiment, the cells were transferred into
quartz tubes (100 mL) for the outdoor growth experiment and were exposed to
natural solar radiation at the pier of GEOMAR. The cultures were
maintained outside in a flow-through water tank, where the seawater
temperature was maintained within a range of 14–16 <inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C. After the cells
had acclimated for 7 days under the solar radiation, aliquots of the cell
cultures were transferred to new quartz tubes filled with fresh medium
before measurements were taken. For the outdoor cultures, the cells received
60 % full-spectrum solar radiation (the quartz tubes were wrapped with neutral
density screens). The daytime average intensities (from 07:00 to 17:00)
of PAR, UV-A and UV-B which the cells received during the outdoor experiment
were about 260 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>mol photons m<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> (about 53 W m<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>,
12.4 and 0.34 W m<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, respectively.</p>
</sec>
<sec id="Ch1.S2.SS2.SSS3">
  <title>Short-term incubation experiments</title>
      <p>Short-term incubation experiments were carried out to test UV effects around
noontime on a cloudy day and sunny day. Three different
radiation treatments were implemented as follows: (1) cells in uncovered
quartz tubes, receiving the full spectrum of solar radiation (above 280 nm, PAR<inline-formula><mml:math display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>UV-A<inline-formula><mml:math display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>UV-B (PAB) treatment); (2) cells in quartz tubes covered with Folex 320
(Montagefolie, Nr. 10155099, Folex, Dreieich, Germany), exposed to UV-A and
PAR (above 320 nm, PAR<inline-formula><mml:math display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>UV-A (PA) treatment); and (3) cells receiving only PAR (<inline-formula><mml:math display="inline"><mml:mi>P</mml:mi></mml:math></inline-formula> treatment)
in quartz tubes covered with Ultraphan film 395 (UV Opak,
Digefra, Munich, Germany). The transmission spectra of the quartz tubes and
the cutoff foils are given by Zheng and Gao (2009). A time-course
experiment was also conducted around noon under full solar spectrum
conditions.</p>
</sec>
</sec>
<sec id="Ch1.S2.SS3">
  <title>Absorptivity of coccoliths</title>
      <p>We examined absorption spectra of the cells with or without coccoliths to
get an indication of how much light and/or UV are blocked by the
coccosphere. Therefore, calcified cells, decalcified cells and cells of the
naked strain were filtered onto Whatman GF/F glass fiber filters (25 mm)
and then were subsequently placed at the window near the detector of a
double-beam UV–VIS–NIR spectrophotometer (PerkinElmer, Lambda950, USA) which
can obtain the absolute absorbance of coccoliths based on the recaptured
scattered light. The absorption of the GF/F filter was corrected with a
control filter which was soaked with particle-free culture medium (Kishino
et al., 1985).</p>
</sec>
<sec id="Ch1.S2.SS4">
  <title>Growth measurement</title>
      <p>Cell densities were measured during a period of 7 days with a particle
counter (Coulter Z1, Beckman). The specific growth rate was calculated as
<inline-formula><mml:math display="inline"><mml:mi mathvariant="italic">μ</mml:mi></mml:math></inline-formula> (d<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> (lnN<inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mi>t</mml:mi></mml:msub><mml:mo>-</mml:mo></mml:mrow></mml:math></inline-formula> lnN<inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>)</mml:mo><mml:mo>/</mml:mo><mml:mi>t</mml:mi></mml:mrow></mml:math></inline-formula>, where <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>N</mml:mi><mml:mi>t</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>
represent the cell concentrations at the beginning and the end of the
incubations and <inline-formula><mml:math display="inline"><mml:mi>t</mml:mi></mml:math></inline-formula> is the incubation time in days.</p><?xmltex \hack{\newpage}?>
</sec>
<sec id="Ch1.S2.SS5">
  <title>Chlorophyll fluorescence measurement</title>
      <p>Parameters of in vivo induced chlorophyll <inline-formula><mml:math display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> fluorescence of photosystem II
were estimated by a phyto-pulse amplitude-modulated fluorometer (Phyto-PAM,
Walz). The maximum quantum yield of PSII (<inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>F</mml:mi><mml:mi>v</mml:mi></mml:msub><mml:mo>/</mml:mo><mml:msub><mml:mi>F</mml:mi><mml:mtext>m</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>) was
calculated as <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>F</mml:mi><mml:mi>v</mml:mi></mml:msub><mml:mo>/</mml:mo><mml:msub><mml:mi>F</mml:mi><mml:mtext>m</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mo>(</mml:mo><mml:msub><mml:mi>F</mml:mi><mml:mtext>m</mml:mtext></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>F</mml:mi><mml:mi>o</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) <inline-formula><mml:math display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>F</mml:mi><mml:mtext>m</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>;
where <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>F</mml:mi><mml:mi>o</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is the basal fluorescence under a measuring light of
0.2 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>mol photons m<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> and <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>F</mml:mi><mml:mtext>m</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> is the maximal
fluorescence measured with a saturating light pulse of
5000 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>mol photons m<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>
(0.8 s) in dark-adapted (15 min) cells.</p>
      <p>In order to compare the transmission of the same strain with or without
coccoliths and to relate this to that of the naked strain, the calcified
strain was decalcified with HCl (1 mol L<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, the final concentration is
0.01 mol L<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) for 10 s and subsequent recovery of the pH with equimolar amounts of
NaOH. Photochemical performance was measured for dark-adapted (15 min) cells
in calcified, decalcified and naked cells. Decalcified cells revealed
<inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>F</mml:mi><mml:mi>v</mml:mi></mml:msub><mml:mo>/</mml:mo><mml:msub><mml:mi>F</mml:mi><mml:mtext>m</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>
values similar to those obtained prior to decalcification. The actinic
light levels were set to 533, 1077 and 2130 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>mol photons m<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>,
respectively (growth light, saturated light and oversaturated light).
Non-photochemical quenching (NPQ) was calculated as NPQ <inline-formula><mml:math display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> (<inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>F</mml:mi><mml:mtext>m</mml:mtext></mml:msub><mml:mo>-</mml:mo><mml:msubsup><mml:mi>F</mml:mi><mml:mtext>m</mml:mtext><mml:mo>′</mml:mo></mml:msubsup><mml:mo>)</mml:mo><mml:mo>/</mml:mo><mml:msubsup><mml:mi>F</mml:mi><mml:mtext>m</mml:mtext><mml:mo>′</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>,
where <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>F</mml:mi><mml:mtext>m</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> was the maximum fluorescence
yield after dark adaptation and <inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mi>F</mml:mi><mml:mtext>m</mml:mtext><mml:mo>′</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> the maximum fluorescence yield
under the actinic light levels.</p>
      <p>To determine rapid light curves (RLCs; electron transport rate vs. light),
the cells were exposed to 10 different PAR levels in sequence (87, 140, 263,
382, 449, 611, 778, 993, 1195 and 1391 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>mol photons m<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, each
of which lasted for 20 s. The relative electron transport rate (rETR)
was assessed as rETR <inline-formula><mml:math display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> Yield <inline-formula><mml:math display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> 0.5 <inline-formula><mml:math display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula> PFD, where the
yield represents the effective quantum yield of PSII (<inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mi>F</mml:mi><mml:mi>v</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mo>/</mml:mo><mml:msubsup><mml:mi>F</mml:mi><mml:mtext>m</mml:mtext><mml:mo>′</mml:mo></mml:msubsup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>; the coefficient 0.5 takes into account that roughly
50 % of all absorbed quanta reach PSII; and PFD is the photon flux density
of the actinic light (<inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>mol m<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> (Genty et al., 1989).</p>
      <p>To examine immediate photochemical responses of the cells to UV radiation,
the cells were exposed to the three different solar radiations (see above)
for 60 min during noontime under natural solar radiation. The effective
quantum yield was calculated as <inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mi>F</mml:mi><mml:mi>v</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mo>/</mml:mo><mml:msubsup><mml:mi>F</mml:mi><mml:mtext>m</mml:mtext><mml:mo>′</mml:mo></mml:msubsup><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula>
(<inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mi>F</mml:mi><mml:mtext>m</mml:mtext><mml:mo>′</mml:mo></mml:msubsup><mml:mo>-</mml:mo><mml:msub><mml:mi>F</mml:mi><mml:mi>t</mml:mi></mml:msub><mml:mo>)</mml:mo><mml:mo>/</mml:mo><mml:msubsup><mml:mi>F</mml:mi><mml:mtext>m</mml:mtext><mml:mo>′</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula>, where <inline-formula><mml:math display="inline"><mml:mrow><mml:msubsup><mml:mi>F</mml:mi><mml:mtext>m</mml:mtext><mml:mo>′</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>F</mml:mi><mml:mi>t</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>
are the maximal fluorescence and steady-state fluorescence in the light-adapted cells, respectively.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F1"><caption><p>Transmission spectra of cells with (calcified strain) and without
(calcified strain with coccoliths removed artificially, decalcified strain)
coccolith cover and naked cells of <italic>Emiliania huxleyi</italic>.</p></caption>
          <?xmltex \igopts{width=170.716535pt}?><graphic xlink:href="https://bg.copernicus.org/articles/13/4637/2016/bg-13-4637-2016-f01.png"/>

        </fig>

</sec>
<sec id="Ch1.S2.SS6">
  <title>Measurement of solar irradiances</title>
      <p>Solar PAR was measured using a Quantum Scalar Laboratory Irradiance Sensor
(QSL-2100/2101, Biospherical Instruments, San Diego, USA). The measured
values were recorded every 10 s and saved on a computer. Solar UV-A and UV-B
radiation were measured with a radiometer (PMA 2100 Solar Light Co.,
Glenside, USA); the mean irradiances of solar UV-A and UV-B during the
experimental periods were confirmed according to the ratios of UV-A/UV-B to
PAR at the experimental location.</p>
</sec>
<sec id="Ch1.S2.SS7">
  <title>Statistics</title>
      <p>The data were expressed as the means <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> standard deviation (SD).
The statistical significance of the data was tested with software of Origin 9.0
(one-way ANOVA, Tukey's post hoc test). A confidence level of 95 % was
used in all analyses.</p>
</sec>
</sec>
<sec id="Ch1.S3">
  <title>Results</title>
      <p>The coccolith layer of <italic>E. huxleyi</italic> absorbed both visible and UV radiation. It reduced
the transmission of visible radiation (400–700 nm) by 7.5 %, that of UV-A (315–400 nm)
by 14.1 % and that of UV-B by 18.4 % (280–315 nm) relative to decalcified
cells and by 6.5 % for PAR, 6.6 % for UV-A and 5.1 % for UV-B, relative
to naked cells (Fig. 1). The specific growth rate of calcifying <italic>E. huxleyi</italic> strain (PML
B92/11) was about 2 times higher than that of the naked strain (CCMP 2090)
(<inline-formula><mml:math display="inline"><mml:mi>P</mml:mi></mml:math></inline-formula> &lt; 0.05) when grown at 500 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>mol photons m<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> of
PAR under indoor conditions (Fig. 2a). Growth rates of both strains were
significantly (<inline-formula><mml:math display="inline"><mml:mi>P</mml:mi></mml:math></inline-formula> &lt; 0.05) reduced when the cells were transferred
outdoors and exposed to natural solar radiation. However, under outdoor
conditions, growth rates of calcified cells were 3.5 times higher than those
of the naked cells, indicating that the latter was more harmed by the solar
exposure than the former (Fig. 2a). The cell diameter was not significantly
different in the calcified cells between the indoor and outdoor conditions
(<inline-formula><mml:math display="inline"><mml:mi>P</mml:mi></mml:math></inline-formula> &gt; 0.05), but an 18 % increase was found in the naked cells
after they had grown under outdoor conditions for 7 days (<inline-formula><mml:math display="inline"><mml:mi>P</mml:mi></mml:math></inline-formula> &lt; 0.05)
(Fig. 2b). The maximal quantum yield (<inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>F</mml:mi><mml:mi>v</mml:mi></mml:msub><mml:mo>/</mml:mo><mml:msub><mml:mi>F</mml:mi><mml:mtext>m</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>) decreased when the cells
were transferred from indoor to the outdoor conditions, reflecting a harmful
effect of solar radiation. The decrease in <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>F</mml:mi><mml:mi>v</mml:mi></mml:msub><mml:mo>/</mml:mo><mml:msub><mml:mi>F</mml:mi><mml:mtext>m</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>, however, was much more
pronounced in the naked cells (27 %) compared to calcified cells (11 %)
(Fig. 2c).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F2"><caption><p>The specific growth rate (<inline-formula><mml:math display="inline"><mml:mi mathvariant="italic">μ</mml:mi></mml:math></inline-formula>) <bold>(a)</bold>, diameter
<bold>(b)</bold> and maximum quantum yield <bold>(c)</bold> of PSII
(<inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>F</mml:mi><mml:mi>v</mml:mi></mml:msub><mml:mo>/</mml:mo><mml:msub><mml:mi>F</mml:mi><mml:mtext>m</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>) of the calcified and naked cells of <italic>E. huxleyi</italic>
grown in indoor and outdoor conditions. Different letters represent
significant differences between the indoor and outdoor experiments. Different
horizontal lines represent significant differences between the different
strains.</p></caption>
        <?xmltex \igopts{width=170.716535pt}?><graphic xlink:href="https://bg.copernicus.org/articles/13/4637/2016/bg-13-4637-2016-f02.png"/>

      </fig>

      <p><?xmltex \hack{\newpage}?>Calcified cells had a significantly higher apparent light use efficiency
(<inline-formula><mml:math display="inline"><mml:mrow><mml:mi mathvariant="italic">α</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, maximal electron transport rate (rETR<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mrow><mml:mi>m</mml:mi><mml:mi>a</mml:mi><mml:mi>x</mml:mi></mml:mrow></mml:msub></mml:math></inline-formula>) and light
saturation parameters (<inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>I</mml:mi><mml:mi>k</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>) compared to naked cells. The decalcified
cells of the calcified strain showed a remarkable decrease in
rETR<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mtext>max</mml:mtext></mml:msub></mml:math></inline-formula> (<inline-formula><mml:math display="inline"><mml:mi>P</mml:mi></mml:math></inline-formula> &lt; 0.05), and alpha and <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>I</mml:mi><mml:mi>k</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> also
decreased but not statistically significantly (Fig. 3, Table 1).
Increased actinic light levels (acclimating light during the fluorescence
measurement) led to higher NPQ in both the calcified and naked strain
(Fig. 4). Furthermore, calcified cells showed higher NPQ values compared to
naked cells (<inline-formula><mml:math display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.05).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F3"><caption><p>The relative electron rate (rETR) of calcified,
decalcified and naked cells of <italic>E. huxleyi</italic> grown under indoor conditions as function
of PAR. The cells were grown for 12–22 generations under 500 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>mol photons m<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> of PAR.</p></caption>
        <?xmltex \igopts{width=170.716535pt}?><graphic xlink:href="https://bg.copernicus.org/articles/13/4637/2016/bg-13-4637-2016-f03.png"/>

      </fig>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T1"><caption><p>Photosynthetic parameters of relative electron transport rate
(Fig. 3) as a function of PAR; different letters represent significant
differences (<inline-formula><mml:math display="inline"><mml:mi>P</mml:mi></mml:math></inline-formula> &lt; 0.05) among the calcified, decalcified and naked
cells.</p></caption><oasis:table frame="topbot"><?xmltex \begin{scaleboxenv}{.92}[.92]?><oasis:tgroup cols="4">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="left"/>
     <oasis:colspec colnum="4" colname="col4" align="left"/>
     <oasis:thead>
       <oasis:row rowsep="1">  
         <oasis:entry colname="col1"/>  
         <oasis:entry colname="col2">Calcified</oasis:entry>  
         <oasis:entry colname="col3">Decalcified</oasis:entry>  
         <oasis:entry colname="col4">Naked</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>  
         <oasis:entry colname="col1"><inline-formula><mml:math display="inline"><mml:mi mathvariant="italic">α</mml:mi></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col2">0.23 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.02<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mtext>a</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col3">0.20 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.01<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mtext>a</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col4">0.17 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 0.02<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mtext>b</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1">rETR<inline-formula><mml:math display="inline"><mml:msub><mml:mi/><mml:mtext>max</mml:mtext></mml:msub></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col2">90.6 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 9.0<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mtext>a</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col3">73.5 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 3.5<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mtext>b</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col4">42.3 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 8.5<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mtext>c</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>  
         <oasis:entry colname="col1"><inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>I</mml:mi><mml:mi>k</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col2">1010.8 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 95.0<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mtext>a</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col3">986.3 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 27.4<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mtext>a</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>  
         <oasis:entry colname="col4">621.8 <inline-formula><mml:math display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 111.1<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mtext>b</mml:mtext></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup><?xmltex \end{scaleboxenv}?></oasis:table></table-wrap>

      <p>When exposed to full-spectrum solar radiation, the quantum yield of
calcified cells showed no significant change during the first 30 min (<inline-formula><mml:math display="inline"><mml:mi>P</mml:mi></mml:math></inline-formula> &gt; 0.05).
After 30 min, the quantum yield quickly dropped from
about 0.35 to 0.22 for <inline-formula><mml:math display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 20 min (<inline-formula><mml:math display="inline"><mml:mi>P</mml:mi></mml:math></inline-formula> &lt; 0.05), followed by
a slight recovery in the last 25 min. A similar trend was observed in
the decalcified cells, with the key difference that the sharp decrease
already happened during the first 10 min. The quantum yield of the naked cells
decreased constantly for the first 50 min and remained at the low level
thereafter (Fig. 5).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F4"><caption><p>The non-photochemical quenching (NPQ) of calcified and
naked cells of <italic>E. huxleyi</italic> grown under indoor conditions. Different letters represent
significant differences among the light levels. Different horizontal lines
represent significant differences among the different type cells.</p></caption>
        <?xmltex \igopts{width=170.716535pt}?><graphic xlink:href="https://bg.copernicus.org/articles/13/4637/2016/bg-13-4637-2016-f04.png"/>

      </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F5"><caption><p>The time course of quantum yield of calcified,
decalcified and naked cells of <italic>E. huxleyi</italic> under full-spectrum solar radiation
(noontime, average PAR, UV-A and UV-B were 1082 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>mol photons m<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>,
48.1 and 1.6 W m<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, respectively).</p></caption>
        <?xmltex \igopts{width=170.716535pt}?><graphic xlink:href="https://bg.copernicus.org/articles/13/4637/2016/bg-13-4637-2016-f05.pdf"/>

      </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F6"><caption><p>The change in quantum yield of the calcified and naked
cells of <italic>E. huxleyi</italic> when transferred from indoor to outdoor conditions, being exposed
to PAR alone (<inline-formula><mml:math display="inline"><mml:mi>P</mml:mi></mml:math></inline-formula>), PAR<inline-formula><mml:math display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>UV-A (PA) and PAR<inline-formula><mml:math display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>UV-A<inline-formula><mml:math display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>UV-B (PAB) for 60 min at around
noontime. Panel <bold>(a)</bold>: measured on a cloudy day (average PAR, UV-A and UV-B were
481 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>mol photons m<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, 22.1 and 0.7 W m<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>,
respectively); panel <bold>(b)</bold>: measured on a sunny day (average PAR, UV-A and UV-B
were 1605 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>mol photons m<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, 69 and 2.4 W m<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, respectively).
Different letters represent significant differences among the light
treatments. Different horizontal lines represent significant differences
between the different strains.</p></caption>
        <?xmltex \igopts{width=170.716535pt}?><graphic xlink:href="https://bg.copernicus.org/articles/13/4637/2016/bg-13-4637-2016-f06.png"/>

      </fig>

      <p>No effect of the radiation treatment (<inline-formula><mml:math display="inline"><mml:mi>P</mml:mi></mml:math></inline-formula>, PA and PAB radiation) on the
quantum yield of calcified cells was observed after the cells grown under
indoor conditions were transferred to outdoor solar radiation for 1 h exposure
(very cloudy day; average PAR, UV-A and UV-B were 481 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>mol photons m<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>,
22.1 and 0.7 W m<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, respectively) (<inline-formula><mml:math display="inline"><mml:mi>P</mml:mi></mml:math></inline-formula> &gt; 0.05). The quantum yield
was significantly higher in the naked cells, however,
when they were exposed to UV-A radiation (PA vs. <inline-formula><mml:math display="inline"><mml:mi>P</mml:mi></mml:math></inline-formula> treatment, <inline-formula><mml:math display="inline"><mml:mi>P</mml:mi></mml:math></inline-formula> &lt; 0.05; Fig. 6a).</p>
      <p>Similar responses were observed when the same test was done on a sunny day
with an average PAR, UV-A and UV-B of 1605 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>mol photons m<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> and 69 and 2.4 W m<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, respectively. Here, the quantum yield of
the calcified cells showed no significant difference between the different
light treatments, but it decreased significantly under the PAB treatment compared
to P treatments in the naked cells (<inline-formula><mml:math display="inline"><mml:mi>P</mml:mi></mml:math></inline-formula> &lt; 0.05) (Fig. 6b).</p>
</sec>
<sec id="Ch1.S4" sec-type="conclusions">
  <title>Discussion</title>
      <p>Various hypotheses were proposed for the possible functions of coccoliths,
but none of them is supported by sufficient evidence (Young, 1994; Raven and
Crawfurd, 2012). One important function of coccoliths for surface-dwelling
species such as <italic>E. huxleyi</italic> could be the protection against high photon flux densities,
especially UV radiation (Berge, 1962; Young, 1994; Gao et al., 2009).</p>
      <p>Some of our results support this hypothesis. The growth rate of the
calcified cells of <italic>E. huxleyi</italic> grown under indoor conditions was about 2 times higher
than that of naked cells. This difference came out even more strongly, with
growth rates 3.5 times higher in calcified versus naked cells, when the
cells were exposed to full-spectrum solar radiation (Fig. 2a). This could
potentially be attributed to the screening of PAR, UV-A and UV-B by
coccoliths. Although the daytime PAR of solar radiation was reduced to about
half of the light level of the indoor test, noontime PAR levels were higher
than 500 <inline-formula><mml:math display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>mol photons m<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, and the presence of UV could
lead to more harm to the naked cells. Light protection by coccoliths is
further supported by the <inline-formula><mml:math display="inline"><mml:mrow><mml:msub><mml:mi>F</mml:mi><mml:mi>v</mml:mi></mml:msub><mml:mo>/</mml:mo><mml:msub><mml:mi>F</mml:mi><mml:mtext>m</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> measurements. The maximum photochemical
efficiency of PSII was only slightly reduced in calcified cells but
significantly decreased in naked cells when they were exposed to natural
solar PAR and UV radiation (Fig. 2c). Furthermore, the photochemical performance
of decalcified cells decreased significantly faster and more strongly with time
compared to calcified cells (Fig. 5).</p>
      <p>The diameter of calcified cells did not significantly change when they were
exposed to the full spectrum of solar radiation. The diameter of the naked
cells, however, increased significantly (Fig. 2b). Perhaps, the naked cells
experienced more DNA damage and so did not enter the <inline-formula><mml:math display="inline"><mml:mi>S</mml:mi></mml:math></inline-formula> phase regularly (Buma
et al., 2000). Alternatively, it may reflect a strategy to acclimatize to
stressful solar UV radiation since it is well known that smaller cells are
usually more sensitive to UV than their larger counterparts (Garcia-Pichel,
1994; Laurion and Vincent, 1998). Some field and laboratory studies showed
increased cell size with increased UV exposure (Buma et al., 2000), which
can be interpreted as an adaptive or acclimation mechanism for protecting the
cells against UV radiation. Furthermore, the naked cells might also employ
other strategies, such as synthesizing UV screening compounds to ameliorate
UV stress, because the naked strain had a lower UV transmittance than the
decalcified strain.</p>
      <p>Several studies found that coccoliths do not protect <italic>E. huxleyi</italic> from excess PAR
(Nanninga and Tyrrell, 1996; Houdan et al., 2005; Trimborn et al., 2007).
However, UV radiation was not considered in these experiments. Our results
showed that the naked cells were more sensitive to full-spectrum solar
radiation than calcified cells, and even in the same strain, the
photochemical performance of decalcified cells decreased significantly when
comparing the calcified cells. This suggests that coccoliths efficiently
protect the cells from solar UV radiation.</p>
      <p>On the other hand, <italic>E. huxleyi</italic> appears to be more sensitive to UV-B irradiances than
other phytoplankton species, and its growth rate and physiological
performances were highly inhibited by UV radiation (Peletier et al., 1996;
Buma et al., 2000; Xu et al., 2011). However, competition tests for
community changes are rare, and longer-term experiments with less extreme
UVR would be more ecologically and evolutionarily relevant (Raven and
Crawfurd, 2012). In our work, UVR had no significant effect on the quantum
yield of calcified cells regardless of high- or low-light conditions but it
showed inhibition in naked cells when they were exposed to high-solar light
(Fig. 6a, b). This provides further evidence for protection by coccoliths
against UV radiation.</p>
      <p>On the cloudy day, no significant difference was observed among the
treatments for the calcified cells; on the sunny day, under the fluctuating
light (data not shown) calcified cells manage to refurbish damage to their
photosynthetic apparatus by balancing damage and repair (Gao et al., 2007;
Ragni et al., 2008; Loebl et al., 2010). For the naked cells, on the other
hand, UV damage was not effectively repaired, leading to the observed
negative effect on photosynthetic performance.</p>
      <p>It has to be noted that our experimental data are based on only two strains
of a naked and calcified <italic>E. huxleyi</italic>. However, similar trends in photophysiology
between naked and decalcified cells in comparison to calcified cells suggest
that the coccoliths of <italic>E. huxleyi</italic> play an important role in protecting this species against
harmful solar radiation, especially UV-A and UV-B. Furthermore, the reported
absence of photoinhibition in this alga at high light levels also appears to
be connected to the coccosphere of <italic>E. huxleyi</italic> or its calcification process. In view of
ongoing ocean change, the projected shoaling of the upper mixed layer (UML)
caused by global warming and progressive ocean acidification that reduces
the thickness or the number of coccoliths per cell (Gao et al., 2009; De
Bodt et al., 2010) could reduce <italic>E. huxleyi</italic> growth rates within the UML due to
increased UVR exposure.</p>
</sec>

      
      </body>
    <back><app-group>
        <supplementary-material position="anchor"><p><bold>The Supplement related to this article is available online at <inline-supplementary-material xlink:href="http://dx.doi.org/10.5194/bg-13-4637-2016-supplement" xlink:title="zip">doi:10.5194/bg-13-4637-2016-supplement</inline-supplementary-material>.</bold></p></supplementary-material>
        </app-group><ack><title>Acknowledgements</title><p>This study was supported by the National Natural Science Foundation (41430967;
41476097; 41120164007), the State Oceanic Administration (National Programme on
Global Change and Air-Sea Interaction, GASI-03-01-02-04), the Joint project of
National Natural Science Foundation of China and Shandong province (no.
U1406403) and the Strategic Priority Research Program of the Chinese Academy of
Sciences (no. XDA1102030204). The visit of Kunshan Gao to Kiel was supported by DAAD. Kai G.
Schulz is the recipient of an Australian Research Council Future Fellowship
(FT120100384).<?xmltex \hack{\newline}?><?xmltex \hack{\newline}?>
Edited by:  T. Treude<?xmltex \hack{\newline}?>
Reviewed by: D. Campbell and one anonymous referee</p></ack><ref-list>
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  </ref-list><app-group content-type="float"><app><title/>

    </app></app-group></back>
    <!--<article-title-html>The role of coccoliths in protecting <i>Emiliania
huxleyi</i> against stressful light and UV radiation</article-title-html>
<abstract-html><p class="p">Coccolithophores are a group of phytoplankton species which cover themselves
with small scales (coccoliths) made of calcium carbonate (CaCO<sub>3</sub>). The
reason why coccolithophores form these calcite platelets has been a matter of
debate for decades but has remained elusive so far. One hypothesis is that
they play a role in light or UV protection, especially in surface dwelling
species like <i>Emiliania huxleyi</i>, which can tolerate exceptionally high
levels of solar radiation. In this study, we tested this hypothesis by
culturing a calcified and a naked strain under different light conditions
with and without UV radiation. The coccoliths of <i>E. huxleyi</i> reduced
the transmission of visible radiation (400–700 nm) by 7.5 %, that of UV-A
(315–400 nm) by 14.1 % and that of UV-B (280–315 nm) by 18.4 %. Growth
rates of the calcified strain (PML B92/11) were about 2 times higher than
those of the naked strain (CCMP 2090) under indoor constant light levels in
the absence of UV radiation. When exposed to outdoor conditions (fluctuating
sunlight with UV radiation), growth rates of calcified cells were almost 3.5
times higher compared to naked cells. Furthermore, the relative electron
transport rate was 114 % higher and non-photochemical quenching (NPQ)
was 281 % higher in the calcified compared to the naked strain, implying
higher energy transfer associated with higher NPQ in the presence of
calcification. When exposed to natural solar radiation including UV
radiation, the maximal quantum yield of photosystem II was only slightly reduced
in the calcified strain but strongly reduced in the naked strain. Our results reveal
an important role of coccoliths in mitigating light and UV stress in
<i>E. huxleyi</i>.</p></abstract-html>
<ref-html id="bib1.bib1"><label>1</label><mixed-citation>
Balch W. M., Kilpatrick, K. A., and Trees, E. E.: The 1991 coccolithophore
bloom in the central North Atlantic. 1. Optical propertiesand factors
affecting their distribution, Limnol. Oceanogr., 41, 1669–1683, 1996.
</mixed-citation></ref-html>
<ref-html id="bib1.bib2"><label>2</label><mixed-citation>
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