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<article xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:oasis="http://docs.oasis-open.org/ns/oasis-exchange/table" dtd-version="3.0">
  <front>
    <journal-meta><journal-id journal-id-type="publisher">BG</journal-id><journal-title-group>
    <journal-title>Biogeosciences</journal-title>
    <abbrev-journal-title abbrev-type="publisher">BG</abbrev-journal-title><abbrev-journal-title abbrev-type="nlm-ta">Biogeosciences</abbrev-journal-title>
  </journal-title-group><issn pub-type="epub">1726-4189</issn><publisher>
    <publisher-name>Copernicus Publications</publisher-name>
    <publisher-loc>Göttingen, Germany</publisher-loc>
  </publisher></journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.5194/bg-14-5029-2017</article-id><title-group><article-title>Differential photosynthetic responses of marine planktonic and benthic
diatoms to ultraviolet radiation under various<?xmltex \hack{\newline}?> temperature regimes</article-title>
      </title-group><?xmltex \runningtitle{Differential photosynthetic responses}?><?xmltex \runningauthor{Y. Wu et al.}?>
      <contrib-group>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Wu</surname><given-names>Yaping</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Yue</surname><given-names>Furong</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="yes" rid="aff2 aff3">
          <name><surname>Xu</surname><given-names>Juntian</given-names></name>
          <email>jtxu@hhit.edu.cn</email>
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff4">
          <name><surname>Beardall</surname><given-names>John</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-7684-446X</ext-link></contrib>
        <aff id="aff1"><label>1</label><institution>College of Oceanography, Hohai University, Nanjing, 210098, China</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>College of Marine Life and Fisheries, Huaihai Institute of Technology,
Lianyungang, 222005, China</institution>
        </aff>
        <aff id="aff3"><label>3</label><institution>Co-Innovation Center of Jiangsu Marine Bio-industry Technology,
Lianyungang, 222005, China</institution>
        </aff>
        <aff id="aff4"><label>4</label><institution>School of Biological Sciences, Monash University, Clayton, Victoria, 3800,
Australia</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Juntian Xu (jtxu@hhit.edu.cn)</corresp></author-notes><pub-date><day>14</day><month>November</month><year>2017</year></pub-date>
      
      <volume>14</volume>
      <issue>22</issue>
      <fpage>5029</fpage><lpage>5037</lpage>
      <history>
        <date date-type="received"><day>6</day><month>March</month><year>2017</year></date>
           <date date-type="rev-request"><day>14</day><month>March</month><year>2017</year></date>
           <date date-type="rev-recd"><day>8</day><month>August</month><year>2017</year></date>
           <date date-type="accepted"><day>10</day><month>October</month><year>2017</year></date>
      </history>
      <permissions>
        
        
      <license license-type="open-access"><license-p>This work is licensed under the Creative Commons Attribution 3.0 Unported License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/3.0/">https://creativecommons.org/licenses/by/3.0/</ext-link></license-p></license></permissions><self-uri xlink:href="https://bg.copernicus.org/articles/14/5029/2017/bg-14-5029-2017.html">This article is available from https://bg.copernicus.org/articles/14/5029/2017/bg-14-5029-2017.html</self-uri><self-uri xlink:href="https://bg.copernicus.org/articles/14/5029/2017/bg-14-5029-2017.pdf">The full text article is available as a PDF file from https://bg.copernicus.org/articles/14/5029/2017/bg-14-5029-2017.pdf</self-uri>
      <abstract>
    <p>We studied the photophysiological responses to ultraviolet radiation (UVR) of
two diatoms, isolated from different environmental niches. Both species
showed the highest sensitivity to UV radiation under relatively low
temperature, while they were less inhibited under moderately increased
temperature. Under the highest temperature applied in this study, the benthic
diatom <italic>Nitzschia</italic> sp. showed minimal sensitivity to UV radiation,
while inhibition of the planktonic species, <italic>Skeletonema</italic> sp.,
increased further compared with that at the growth temperature. These
photochemical responses were linked to values for the repair and damage
processes within the cell; higher damage rates and lower repair rates were
observed for <italic>Skeletonema</italic> sp. under suboptimal temperature, while for
<italic>Nitzschia</italic> sp., repair rates increased and damage rates were stable
within the applied temperature range. Our results suggested that the response
of the microalgae to UV radiation correlated with their niche environments,
the periodic exposure to extreme temperatures promoting the resistance of the
benthic species to the combination of high temperature and UV radiation.</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <title>Introduction</title>
      <p>As the most abundant group of microalgae, and one that plays an important
role in marine ecosystem function and biogeochemical cycles, diatoms are
traditionally divided into centric and pennate species on the basis of their
valve symmetry (Round et al., 1990). Centric diatoms are usually, though not
invariably, planktonic; pennate species are benthic and are often found
living in different niches (Irwin et al., 2012; Keithan et al.,
1988).
The distribution of centric diatoms is more widespread, with records for the
open ocean as well as coastal water, and they maintain their position in the
upper mixing layer by maintaining buoyancy with elaborated spines or
excretion of heavy ions (Lavoie et al., 2016; Villareal, 1988). In contrast,
pennate diatoms are often found in the intertidal zone (Stevenson, 1983).
Therefore, the two groups of diatoms are likely to have evolved different
strategies to cope with their niche environments (Barnett et al.,
2015; Lavaud et al., 2016, 2007).</p>
      <p>Temperature affects almost all biochemical reactions in living cells, and it is
one of the most important factors that determines the biogeography, as well
as the temporal variation of phytoplankton (Levasseur et al., 1984). Under
global change scenarios, increases in sea surface temperature would
re-structure the phytoplankton assemblages in the future ocean (Thomas et
al., 2012). At small spatial scales (e.g., the coastal zone) diurnal cycle of
tides or meteorological events could expose benthic diatoms to extreme
environments, including high photosynthetically active radiation (PAR) and
ultraviolet (UV) radiation exposure as well as larger variations in
temperature than found for planktonic species. Hence organisms in such
exposed areas should potentially possess highly efficient mechanisms to
adapt to such an environment (Souffreau et al., 2010; Weisse et al., 2016).</p>
      <p>In the intertidal zone, UV radiation (UVR) is another driving force. UVR is
a component of the solar spectrum, along with PAR, and has wide-reaching
effects on organisms, especially photoautotrophs due to their demands for
light energy (Williamson et al., 2014). The penetration of effective UVR in
coastal waters is mainly dependent on the properties of the seawater
(Tedetti and Sempere, 2006). Previous studies have found that UVR
significantly inhibited carbon fixation by phytoplankton in the surface
layer, with less inhibition or even stimulation in deep water due to low UVR
and limiting levels of PAR (Gao et al., 2007). Detrimental effects, however,
varied seasonally, with less inhibition observed for planktonic assemblages
during summer, though UVR was the highest. This may be attributable to the
higher water temperature, which facilitated enzyme-catalyzed repair processes
within the cell (Wu et al., 2010). There are few documented studies on
benthic species, which actually are potentially more resistant to UVR as
they are periodically exposed to high solar radiation during low tide
(Barnett et al., 2015).</p>
      <p>Photosystem II (PSII) initiates the first step of photosynthesis, converting
photons to electrons efficiently, but this complex is very sensitive to
light (Campbell and Tyystjarvi, 2012). The subunits of PSII are broken down
under UVR or high PAR while repaired by insertion of de novo synthesized
protein (Aro et al., 1993); the repair process eventually reaches a dynamic
balance with damage (Heraud and Beardall, 2000). However, these two
processes are independent of each other. The photochemical damage is
mainly determined by the intensity and spectrum of light (Heraud and
Beardall, 2000) and is temperature insensitive, while the repair process is
driven by a series of enzyme-catalyzed reactions and is thus potentially
sensitive to temperature changes (Melis, 1999). Previous studies revealed
that high temperature alleviated UV inhibition of PSII in green algae (Wong
et al., 2015), while it interactively decreased photosynthetic activity in
microphytobenthos under excessive PAR conditions (Laviale et al., 2015).</p>
      <p>Considering the importance of diatoms to coastal primary productivity
(Carstensen et al., 2015), their responses to environmental factors are of
considerable interest (Häder et al., 2011). However, the niches in which
planktonic and benthic diatom species exist have quite different physical
and chemical characteristics (Souffreau et al., 2010). In this study, we
used two freshly isolated species to test the hypothesis that benthic
diatoms have a stronger ability to adapt to potentially stressful solar UV
radiation under high-temperature regimes.</p>
</sec>
<sec id="Ch1.S2">
  <title>Materials and methods</title>
<sec id="Ch1.S2.SS1">
  <title>Species and culture conditions</title>
      <p>We collected samples from offshore water and intertidal sediments in the
coastal area of the Yellow Sea. These were re-suspended in seawater and
enriched with Aquil medium and incubated in a growth chamber for 3 days
(Morel et al., 1979). Then a sub-sample was examined under a microscope, and
single cells were picked up with a micropipette. <italic>Skeletonema</italic> sp. and <italic>Nitzschia</italic> sp. were chosen for the
present study and were maintained in Aquil medium in a growth chamber at 15 <inline-formula><mml:math id="M1" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C. Prior to the experiment, both species were inoculated into
enriched seawater (Aquil medium) and cultured semi-continuously in 500 mL
polycarbonate bottles, illuminated with cool fluorescent tubes at a photon
flux density of <inline-formula><mml:math id="M2" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 200 <inline-formula><mml:math id="M3" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>mol m<inline-formula><mml:math id="M4" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math id="M5" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, with a
<inline-formula><mml:math id="M6" display="inline"><mml:mrow><mml:mn mathvariant="normal">12</mml:mn><mml:mo>:</mml:mo><mml:mn mathvariant="normal">12</mml:mn></mml:mrow></mml:math></inline-formula> light / dark cycle. Temperature was set at 15, 20, or 25 <inline-formula><mml:math id="M7" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C,
with variation less than 0.5 <inline-formula><mml:math id="M8" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C, and cultures were diluted
every day with fresh medium. Bottles (triplicates for each temperature) were
manually shaken 2–3 times during the light period and randomly distributed
in the growth chamber.</p>
      <p>Specific growth rate was estimated from the changes of dark adapted
chlorophyll fluorescence (see below) and calculated as <inline-formula><mml:math id="M9" display="inline"><mml:mrow><mml:mi mathvariant="italic">μ</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> (Ln
F<inline-formula><mml:math id="M10" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> – Ln F<inline-formula><mml:math id="M11" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>/(D<inline-formula><mml:math id="M12" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> – D<inline-formula><mml:math id="M13" display="inline"><mml:mrow><mml:msub><mml:mi/><mml:mn mathvariant="normal">1</mml:mn></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, where F<inline-formula><mml:math id="M14" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">1</mml:mn></mml:msub></mml:math></inline-formula> and F<inline-formula><mml:math id="M15" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula>
represent the steady-state fluorescence intensity at day 1 and day 2,
respectively.</p>
</sec>
<sec id="Ch1.S2.SS2">
  <title>Determination of the absorption spectra of pigments</title>
      <p>A total of 50 mL of culture was filtered onto a GF/F filter, and extracted in 5 mL
absolute methanol for 2 h at room temperature in a 10 mL centrifuging tube,
then centrifuged at 4000 rpm for 15 min (TDZ4-WS, Luxiang Inc.). The
supernatant was scanned with a spectrophotometer (Lambda 35, PerkinElmer) in
the range of 280–750 nm.</p>
</sec>
<sec id="Ch1.S2.SS3">
  <title>Experimental setup</title>
      <p>The experiments were performed under a customized solar simulator with a
1000 W xenon arc lamp as the light source. The incident irradiances of UV-B
light (280–315 nm), UV-A (315–400 nm), and PAR (400–700 nm) were measured
using a broadband radiometer (SOLAR-2UV, TINEL Inc.,
<uri>http://www.tinel.cn</uri>).</p>
      <p>After 5-day acclimation under the target temperature, samples of both
species in the exponential phase were harvested during the middle of the
light period and directly transferred to quartz tubes (35 mL) at a density
of less than 20 <inline-formula><mml:math id="M16" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>g chl <inline-formula><mml:math id="M17" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula> L<inline-formula><mml:math id="M18" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, dark-adapted for 15 min, and treated
by addition of Milli-Q water (as a control) or lincomycin (final
concentration, 0.5 mg mL<inline-formula><mml:math id="M19" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>; the latter inhibits protein synthesis and
was used to get a better determination of damage rate in the absence of
repair. The tubes were then placed into a water bath one after another at 1 min intervals while covered with cut-off filters (ZJB280, ZJB400) that
block radiation below 280 or 400 nm, respectively (the filters' properties
were checked by scanning in the wavelength range of 250–750 nm against air
as a blank; see Fig. S1 in the Supplement), to create PAR <inline-formula><mml:math id="M20" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> UV-A <inline-formula><mml:math id="M21" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> UV-B (PAB) and PAR
treatments respectively. The light levels applied were
PAR <inline-formula><mml:math id="M22" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 440 <inline-formula><mml:math id="M23" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>mol photons m<inline-formula><mml:math id="M24" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math id="M25" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> and UVR <inline-formula><mml:math id="M26" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 41.6 W m<inline-formula><mml:math id="M27" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, while temperature
was controlled with a cooling system (CTP3000, Eyela) and was set as the
incubation level (termed “acclimated”) or the incubation temperature <inline-formula><mml:math id="M28" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>10 <inline-formula><mml:math id="M29" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C (termed “short-term”), the latter mimicking a moderate
increase in temperature in the intertidal zone during a low-tide period.
After the light exposure, samples were moved into a water bath at the same
temperature as light exposure, but under dim light (<inline-formula><mml:math id="M30" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 30 <inline-formula><mml:math id="M31" display="inline"><mml:mi mathvariant="normal">µ</mml:mi></mml:math></inline-formula>mol photons m<inline-formula><mml:math id="M32" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> s<inline-formula><mml:math id="M33" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> for recovery, effective quantum yields
were then measured at 12 min intervals. The detailed experimental design can
be found in Fig. S2.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F1"><caption><p>The quantum yields of 15 <inline-formula><mml:math id="M34" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C grown <italic>Skeletonema</italic> sp. and <italic>Nitzschia</italic> sp. under PAR or
PAR <inline-formula><mml:math id="M35" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> UVR (PAB) for 1 h exposure and subsequent recovery under dim light
(gray area) for 1 h, which were incubated and measured at 15 <inline-formula><mml:math id="M36" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C
(<bold>a</bold> <italic>Skeletonema</italic> sp., <bold>c</bold> <italic>Nitzschia</italic> sp.) or 25 <inline-formula><mml:math id="M37" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C (<bold>b</bold> <italic>Skeletonema</italic> sp., <bold>d</bold> <italic>Nitzschia</italic>
sp.). Vertical lines represent SD, <inline-formula><mml:math id="M38" display="inline"><mml:mrow><mml:mi>n</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 3.</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://bg.copernicus.org/articles/14/5029/2017/bg-14-5029-2017-f01.png"/>

        </fig>

</sec>
<sec id="Ch1.S2.SS4">
  <title>Chlorophyll fluorescence measurements</title>
      <p>A total of 12 tubes (2 species and 2 radiation treatments for each
temperature level) were dark-adapted for 15 min. Then each tube was moved
into a water bath one by one at 1 min intervals for light exposure, and 2 mL sub-samples were taken to measure the initial chlorophyll fluorescence
with an AquaPen fluorometer (AP-C 100, PSI). During the subsequent light
exposure, sub-samples were withdrawn every 12 min from the quartz tubes
for fluorescence measurement; this procedure ensured that every sample was
exposed to radiation for exactly the same time. After five rounds of
measurements (60 min), samples that were without lincomycin were transferred
into the low-light condition under the same temperature for recovery, and
chlorophyll fluorescence was measured as above for 60 min.</p>
</sec>
<sec id="Ch1.S2.SS5">
  <title>Data analysis</title>
      <p>Effective quantum yields were measured after 20 s of dark period
(operational time between sampling and measuring) with the AquaPen and
calculated according to the following equations:

                <disp-formula id="Ch1.Ex1"><mml:math id="M39" display="block"><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mtext>effective quantum yield</mml:mtext><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mo>=</mml:mo><mml:mo>(</mml:mo><mml:msubsup><mml:mrow class="chem"><mml:mi mathvariant="normal">F</mml:mi></mml:mrow><mml:mi mathvariant="normal">m</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mo>-</mml:mo><mml:msubsup><mml:mrow class="chem"><mml:mi mathvariant="normal">F</mml:mi></mml:mrow><mml:mi>o</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mo>)</mml:mo><mml:mo>/</mml:mo><mml:msubsup><mml:mrow class="chem"><mml:mi mathvariant="normal">F</mml:mi></mml:mrow><mml:mi mathvariant="normal">m</mml:mi><mml:mo>′</mml:mo></mml:msubsup><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          where F<inline-formula><mml:math id="M40" display="inline"><mml:mrow><mml:msubsup><mml:mi/><mml:mi mathvariant="normal">m</mml:mi><mml:mo>′</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> is the effective maximal fluorescence, and
F<inline-formula><mml:math id="M41" display="inline"><mml:mrow><mml:msubsup><mml:mi/><mml:mi>o</mml:mi><mml:mo>′</mml:mo></mml:msubsup></mml:mrow></mml:math></inline-formula> is the minimal fluorescence in the presence of
nonphotochemical quenching which persists after highlight exposure.</p>
      <p>The relative UV inhibition of effective quantum yield was estimated
according to the following equation:

                <disp-formula id="Ch1.Ex2"><mml:math id="M42" display="block"><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mtext>relative UV inhibition</mml:mtext><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mo>(</mml:mo><mml:mi mathvariant="italic">%</mml:mi><mml:mo>)</mml:mo><mml:mo>=</mml:mo><mml:mo>(</mml:mo><mml:msub><mml:mi>P</mml:mi><mml:mi mathvariant="normal">P</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>P</mml:mi><mml:mi mathvariant="normal">PAB</mml:mi></mml:msub><mml:mo>)</mml:mo><mml:mo>/</mml:mo><mml:msub><mml:mi>P</mml:mi><mml:mi mathvariant="normal">P</mml:mi></mml:msub><mml:mo>×</mml:mo><mml:mn mathvariant="normal">100</mml:mn><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          where <inline-formula><mml:math id="M43" display="inline"><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mi mathvariant="normal">P</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M44" display="inline"><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mi mathvariant="normal">PAB</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> represent the effective quantum yield under
PAR and PAB treatments, respectively. Relative UV inhibition was calculated
when <inline-formula><mml:math id="M45" display="inline"><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mi mathvariant="normal">P</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M46" display="inline"><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mi mathvariant="normal">PAB</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> were significantly different.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F2"><caption><p>The quantum yields of 20 <inline-formula><mml:math id="M47" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C grown <italic>Skeletonema</italic> sp. and <italic>Nitzschia</italic> sp. under PAR or PAB
for 1 h exposure and subsequent recovery under dim light (gray area) for
1 h, which were incubated and measured at 20 <inline-formula><mml:math id="M48" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C (<bold>a</bold> <italic>Skeletonema</italic> sp., <bold>c</bold> <italic>Nitzschia</italic> sp.)
or 30 <inline-formula><mml:math id="M49" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C (<bold>b</bold> <italic>Skeletonema</italic> sp., <bold>d</bold> <italic>Nitzschia</italic>
sp.). Vertical lines represent SD, <inline-formula><mml:math id="M50" display="inline"><mml:mrow><mml:mi>n</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 3.</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://bg.copernicus.org/articles/14/5029/2017/bg-14-5029-2017-f02.png"/>

        </fig>

      <p>The rates of UVR-induced damage to PSII (<inline-formula><mml:math id="M51" display="inline"><mml:mi>k</mml:mi></mml:math></inline-formula>, min<inline-formula><mml:math id="M52" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> were calculated from
lincomycin-treated samples assuming repair (<inline-formula><mml:math id="M53" display="inline"><mml:mrow><mml:mi>r</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> under these conditions was
zero. Repair rates (<inline-formula><mml:math id="M54" display="inline"><mml:mi>r</mml:mi></mml:math></inline-formula>, min<inline-formula><mml:math id="M55" display="inline"><mml:mrow><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> were calculated using
non-lincomycin-treated samples with the fixed <inline-formula><mml:math id="M56" display="inline"><mml:mi>k</mml:mi></mml:math></inline-formula> values obtained from the
parallel experiments with lincomycin. Both calculations were made according
to the Kok equation (Heraud and Beardall, 2000):

                <disp-formula id="Ch1.Ex3"><mml:math id="M57" display="block"><mml:mrow><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi mathvariant="normal">P</mml:mi><mml:mi>t</mml:mi></mml:msub></mml:mrow><mml:mrow><mml:msub><mml:mi mathvariant="normal">P</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi>r</mml:mi><mml:mrow><mml:mi>k</mml:mi><mml:mo>+</mml:mo><mml:mi>r</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>+</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mi>k</mml:mi><mml:mrow><mml:mi>k</mml:mi><mml:mo>+</mml:mo><mml:mi>r</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:msup><mml:mi>e</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mfenced close=")" open="("><mml:mi>k</mml:mi><mml:mo>+</mml:mo><mml:mi>r</mml:mi></mml:mfenced><mml:mi>t</mml:mi></mml:mrow></mml:msup><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          where <inline-formula><mml:math id="M58" display="inline"><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M59" display="inline"><mml:mrow><mml:msub><mml:mi>P</mml:mi><mml:mi>t</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> represent the effective quantum yield at time zero
and <inline-formula><mml:math id="M60" display="inline"><mml:mi>t</mml:mi></mml:math></inline-formula> (minutes), respectively.</p>
      <p>The recovery rates under dim light were calculated with a simple exponential
rise equation (Heraud and Beardall, 2000):

                <disp-formula id="Ch1.Ex4"><mml:math id="M61" display="block"><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mi>y</mml:mi><mml:mo>=</mml:mo><mml:msub><mml:mi>y</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>+</mml:mo><mml:mi>c</mml:mi><mml:mo>(</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>-</mml:mo><mml:msup><mml:mi>e</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mi mathvariant="italic">α</mml:mi><mml:mi>t</mml:mi></mml:mrow></mml:msup><mml:mo>)</mml:mo><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          where <inline-formula><mml:math id="M62" display="inline"><mml:mi>y</mml:mi></mml:math></inline-formula> represents the effective quantum yield at time <inline-formula><mml:math id="M63" display="inline"><mml:mi>t</mml:mi></mml:math></inline-formula> (minutes) during
the dim light incubation, <inline-formula><mml:math id="M64" display="inline"><mml:mi mathvariant="italic">α</mml:mi></mml:math></inline-formula> was the recovery rate, while <inline-formula><mml:math id="M65" display="inline"><mml:mrow><mml:msub><mml:mi>y</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> and
<inline-formula><mml:math id="M66" display="inline"><mml:mi>c</mml:mi></mml:math></inline-formula> are constants.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F3"><caption><p>The quantum yields of 25 <inline-formula><mml:math id="M67" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C grown <italic>Skeletonema</italic> sp. and <italic>Nitzschia</italic> sp. under PAR or PAB
for 1 h exposure and subsequent recovery under dim light (gray area) for
1 h, which were incubated and measured at 25 <inline-formula><mml:math id="M68" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C (<bold>a</bold> <italic>Skeletonema</italic> sp., <bold>c</bold> <italic>Nitzschia</italic> sp.) or
35 <inline-formula><mml:math id="M69" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C (<bold>b</bold> <italic>Skeletonema</italic> sp., <bold>d</bold> <italic>Nitzschia</italic>
sp.). Vertical lines represent SD, <inline-formula><mml:math id="M70" display="inline"><mml:mrow><mml:mi>n</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 3.</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://bg.copernicus.org/articles/14/5029/2017/bg-14-5029-2017-f03.png"/>

        </fig>

      <p>Statistical differences for the kinetics of changes in effective quantum
yield among treatments were analyzed with repeated measures analysis of
variance (RM-ANOVA). The differences of relative UV inhibition and rate
constants among treatments were analyzed by one-way ANOVA; a confidence
interval of 95 % was set for all tests. For the calculation of the ratio
of <inline-formula><mml:math id="M71" display="inline"><mml:mi>r</mml:mi></mml:math></inline-formula> : <inline-formula><mml:math id="M72" display="inline"><mml:mi>k</mml:mi></mml:math></inline-formula> and the relative UV inhibition (%), propagation errors were taken
into account to estimate variance.</p>
</sec>
</sec>
<sec id="Ch1.S3">
  <title>Results</title>
      <p>The initial photochemical quantum yield of <italic>Skeletonema</italic> sp. grown at 15 <inline-formula><mml:math id="M73" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C was
around 0.50 during light exposure (incubated under 15 <inline-formula><mml:math id="M74" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C) but
decreased gradually toward the end of the radiation treatments, with lower
values under PAB than under the PAR condition (<inline-formula><mml:math id="M75" display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.001,
<inline-formula><mml:math id="M76" display="inline"><mml:mi>F</mml:mi></mml:math></inline-formula> <inline-formula><mml:math id="M77" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 30.1; Fig. 1a, Table S1 in the Supplement). During the dim light exposure period, the quantum yield
recovered to its initial value within 24 min under PAR treatment, while PAB-treated cells only recovered partially to <inline-formula><mml:math id="M78" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 70 % by the end
of the dim light incubation (Fig. 1a). For 15 <inline-formula><mml:math id="M79" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C grown cells that
were incubated under 25 <inline-formula><mml:math id="M80" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C, the general patterns were similar to
those incubated under 15 <inline-formula><mml:math id="M81" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C; the differences between the PAR and
PAB treatments were smaller but still significant (<inline-formula><mml:math id="M82" display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.001, <inline-formula><mml:math id="M83" display="inline"><mml:mi>F</mml:mi></mml:math></inline-formula> <inline-formula><mml:math id="M84" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 9.8; Fig. 1b, Table S1). Under dim light, the quantum yield of cells under both
radiation treatments recovered to near initial values (Fig. 1b). For 15 <inline-formula><mml:math id="M85" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C grown <italic>Nitzschia</italic> sp. that was measured at
15 <inline-formula><mml:math id="M86" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C, the pattern of
decrease in effective quantum yield was similar to that of <italic>Skeletonema</italic> sp., with lower
values under PAB (<inline-formula><mml:math id="M87" display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.001, <inline-formula><mml:math id="M88" display="inline"><mml:mi>F</mml:mi></mml:math></inline-formula> <inline-formula><mml:math id="M89" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 38.8; Fig. 1c, Table S1). In
addition, PAB-exposed <italic>Nitzschia</italic> sp. could only recover to <inline-formula><mml:math id="M90" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 50 % of the
initial value under dim light (Fig. 1c). However, when 15 <inline-formula><mml:math id="M91" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C grown
<italic>Nitzschia</italic> sp. were incubated at 25 <inline-formula><mml:math id="M92" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C for light exposure, both PAR- and PAB-treated cells had higher quantum yields, and PAB-exposed cells recovered to
75 % of the initial value when subsequently incubated under dim light (Fig. 1d). The increase of temperature (15 to 25 <inline-formula><mml:math id="M93" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C) and UV radiation
also showed interactive effects for both <italic>Skeletonema</italic> sp. (<inline-formula><mml:math id="M94" display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.022, <inline-formula><mml:math id="M95" display="inline"><mml:mi>F</mml:mi></mml:math></inline-formula> <inline-formula><mml:math id="M96" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 2.98)  and <italic>Nitzschia</italic> sp.
(<inline-formula><mml:math id="M97" display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.046, <inline-formula><mml:math id="M98" display="inline"><mml:mi>F</mml:mi></mml:math></inline-formula> <inline-formula><mml:math id="M99" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 2.5; Table S2).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F4"><caption><p>The relative UV inhibition on the photosystem II of <italic>Skeletonema</italic> sp. <bold>(a)</bold> and
<italic>Nitzschia</italic> sp. <bold>(b)</bold> under grown or short-term elevated temperature. Vertical lines
represent variance.</p></caption>
        <?xmltex \igopts{width=170.716535pt}?><graphic xlink:href="https://bg.copernicus.org/articles/14/5029/2017/bg-14-5029-2017-f04.png"/>

      </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F5"><caption><p>The repair rate <bold>(a)</bold> and damage rate <bold>(b)</bold> of photosystem II in
<italic>Skeletonema</italic> sp. during PAR or PAB exposure under grown temperature (acclimated) or short-term elevated temperature (short_term), and the ratio of
repair to damage rate <bold>(c)</bold>. Vertical lines in panel <bold>(a)</bold> and <bold>(b)</bold> represent SD,
<inline-formula><mml:math id="M100" display="inline"><mml:mrow><mml:mi>n</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 3, while vertical lines in panel  <bold>(c)</bold> represent variance. Data points with
different lowercase letters (blue for PAR treatment, and red for PAB
treatment) indicate significant differences among temperature treatments.</p></caption>
        <?xmltex \igopts{width=170.716535pt}?><graphic xlink:href="https://bg.copernicus.org/articles/14/5029/2017/bg-14-5029-2017-f05.png"/>

      </fig>

      <p>The 20 <inline-formula><mml:math id="M101" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C grown <italic>Skeletonema</italic> sp. showed significant UV inhibition at incubation
temperatures of 20 <inline-formula><mml:math id="M102" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C (<inline-formula><mml:math id="M103" display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.001, <inline-formula><mml:math id="M104" display="inline"><mml:mi>F</mml:mi></mml:math></inline-formula> <inline-formula><mml:math id="M105" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 8.9) and 30 <inline-formula><mml:math id="M106" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C (<inline-formula><mml:math id="M107" display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.033, <inline-formula><mml:math id="M108" display="inline"><mml:mi>F</mml:mi></mml:math></inline-formula> <inline-formula><mml:math id="M109" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 3.1) and recovered more quickly under dim
light, especially for the PAB-treated cells, compared with samples under 15 <inline-formula><mml:math id="M110" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C (Fig. 2a, b, Table S1).
For <italic>Nitzschia</italic> sp. that were grown at 20 <inline-formula><mml:math id="M111" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C, cells showed moderate UV inhibition during radiation
exposure (<inline-formula><mml:math id="M112" display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.001, <inline-formula><mml:math id="M113" display="inline"><mml:mi>F</mml:mi></mml:math></inline-formula> <inline-formula><mml:math id="M114" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 10.1), and the quantum yield under PAB
treatment only recovered to <inline-formula><mml:math id="M115" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 80 % at the end of the dim
light incubation at 20 <inline-formula><mml:math id="M116" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C, while quantum yield recovered
to the initial value in cells measured under 30 <inline-formula><mml:math id="M117" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C (Fig. 2c, d,
Table S1). Interactive effects of temperature increase (20 to 30 <inline-formula><mml:math id="M118" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C) and UV radiation were observed for both <italic>Skeletonema</italic>
sp. (<inline-formula><mml:math id="M119" display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.01, <inline-formula><mml:math id="M120" display="inline"><mml:mi>F</mml:mi></mml:math></inline-formula> <inline-formula><mml:math id="M121" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 4.35) and
<italic>Nitzschia</italic> sp. (<inline-formula><mml:math id="M122" display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.015, <inline-formula><mml:math id="M123" display="inline"><mml:mi>F</mml:mi></mml:math></inline-formula> <inline-formula><mml:math id="M124" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 3.26; Table S2).</p>
      <p><italic>Skeletonema</italic> sp. that was grown and measured at 25 <inline-formula><mml:math id="M125" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C showed a similar pattern to
that grown under 20 <inline-formula><mml:math id="M126" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C during both radiation exposure and
subsequent dim light (Fig. 3a). However, quantum yields decreased
significantly once cells were moved into 35 <inline-formula><mml:math id="M127" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C, with much lower
values observed under the PAB and PAR treatments (<inline-formula><mml:math id="M128" display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.001) than
under 25 <inline-formula><mml:math id="M129" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C. However, there was no significant difference between
PAB and PAR treatments under 35 <inline-formula><mml:math id="M130" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C (<inline-formula><mml:math id="M131" display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.60, <inline-formula><mml:math id="M132" display="inline"><mml:mi>F</mml:mi></mml:math></inline-formula> <inline-formula><mml:math id="M133" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0.74; Table S1). During the dim light period, <italic>Skeletonema</italic> sp.
only recovered to <inline-formula><mml:math id="M134" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 30 %
for the PAR treatment, while there was no recovery after the PAB treatment
(Fig. 3b). For <italic>Nitzschia</italic> sp. measured under 25 or 35 <inline-formula><mml:math id="M135" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C, both treatments showed
a similar response, with lower values under PAB than under PAR during the
radiation exposure (<inline-formula><mml:math id="M136" display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.001 and <inline-formula><mml:math id="M137" display="inline"><mml:mi>F</mml:mi></mml:math></inline-formula> <inline-formula><mml:math id="M138" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 13.3 at 25 <inline-formula><mml:math id="M139" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C,
<inline-formula><mml:math id="M140" display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.01 and <inline-formula><mml:math id="M141" display="inline"><mml:mi>F</mml:mi></mml:math></inline-formula> <inline-formula><mml:math id="M142" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 5.4 at 35 <inline-formula><mml:math id="M143" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C; Table S1), while cells
could recover to near initial values at the end of the dim light incubation
(Fig. 3c, d). An interactive effect of temperature increase (25–35 <inline-formula><mml:math id="M144" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C) and UV radiation was only observed for
<italic>Skeletonema</italic> sp. (<inline-formula><mml:math id="M145" display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 0.049, <inline-formula><mml:math id="M146" display="inline"><mml:mi>F</mml:mi></mml:math></inline-formula> <inline-formula><mml:math id="M147" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 2.46; Table S2).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F6"><caption><p>The repair rate <bold>(a)</bold> and damage rate <bold>(b)</bold> of photosystem II in
<italic>Nitzschia</italic> sp. during PAR or PAB exposure under grown temperature (acclimated) or short-term elevated temperature (short_term), and the ratio of
repair to damage rate <bold>(c)</bold>. Vertical lines in panel <bold>(a)</bold> and <bold>(b)</bold> represent SD,
<inline-formula><mml:math id="M148" display="inline"><mml:mrow><mml:mi>n</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 3, while vertical lines in panel <bold>(c)</bold> represent variance. Data points with
different lowercase letters (blue for PAR treatment, and red for PAB
treatment) indicate significant differences among temperature treatments.</p></caption>
        <?xmltex \igopts{width=184.942913pt}?><graphic xlink:href="https://bg.copernicus.org/articles/14/5029/2017/bg-14-5029-2017-f06.png"/>

      </fig>

      <p>In the presence of lincomycin, changes in effective quantum yield showed a
decreasing pattern with exposure time for most of the treatments (Figs. S3–5),
but with much greater amplitude compared with non-lincomycin-treated
samples. The relative UV inhibition at the end of radiation exposure is
shown in Fig. 4. Both species showed the greatest sensitivities under 15 <inline-formula><mml:math id="M149" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C, with <inline-formula><mml:math id="M150" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 80 and <inline-formula><mml:math id="M151" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 70 %
relative UV inhibition of photochemical quantum yield for <italic>Skeletonema</italic> sp. and <italic>Nitzschia</italic> sp.,
respectively. In the range of acclimated temperatures, relative UV
inhibition decreased with increase of temperature for both species. In the
short-term incubations with a 10 <inline-formula><mml:math id="M152" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C increase, UV inhibition of
<italic>Skeletonema</italic> sp. was comparable at 25 and 30 <inline-formula><mml:math id="M153" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C, but increased
significantly to <inline-formula><mml:math id="M154" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 50 % at 35 <inline-formula><mml:math id="M155" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C (<inline-formula><mml:math id="M156" display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.01). For <italic>Nitzschia</italic> sp., relative UV inhibition
was around 25 % in the temperature
range of 25–35 <inline-formula><mml:math id="M157" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C during the short-term incubations.</p>
      <p>During radiation exposure, the repair rates for PSII in <italic>Skeletonema</italic> sp. varied across the
different temperatures, with highest values observed at 25 <inline-formula><mml:math id="M158" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C,
and lowest values at 35 <inline-formula><mml:math id="M159" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C for both radiation
treatments (Fig. 5a). The damage rates gradually decreased from 15 to 25 <inline-formula><mml:math id="M160" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C, then increased significantly toward 35 <inline-formula><mml:math id="M161" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C
(Fig. 5b; <inline-formula><mml:math id="M162" display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.001). The ratio of repair rate to damage rate (<inline-formula><mml:math id="M163" display="inline"><mml:mi>r</mml:mi></mml:math></inline-formula> : <inline-formula><mml:math id="M164" display="inline"><mml:mrow><mml:mi>k</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> showed a
unimodal pattern with peak values at 25 <inline-formula><mml:math id="M165" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C, and with lowest
values under 15 or 35 <inline-formula><mml:math id="M166" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C, especially for the PAB treatment (Fig. 5c).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F7"><caption><p>The rate constants for recovery of PAR-exposed <italic>Skeletonema</italic> sp. <bold>(a)</bold> and <italic>Nitzschia</italic> sp. <bold>(b)</bold>, and rate
constants for recovery of PAB-exposed <italic>Skeletonema</italic> sp. <bold>(c)</bold> and <italic>Nitzschia</italic> sp. <bold>(d)</bold> Under dim light, samples
were incubated under grown temperature (acclimated) or short-term elevated
temperature (short_term). Vertical lines represent SD, <inline-formula><mml:math id="M167" display="inline"><mml:mrow><mml:mi>n</mml:mi><mml:mo>=</mml:mo></mml:mrow></mml:math></inline-formula> 3.
Data points with different lowercase letters (blue for PAR treatment, and
red for PAB treatment) indicate significant differences among temperature
treatments.</p></caption>
        <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://bg.copernicus.org/articles/14/5029/2017/bg-14-5029-2017-f07.png"/>

      </fig>

      <p>The repair rate during light exposure for <italic>Nitzschia</italic> sp. increased significantly in the
temperature range of 15 to 25 <inline-formula><mml:math id="M168" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C (<inline-formula><mml:math id="M169" display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.001) while
remaining relatively stable from 25 to 35 <inline-formula><mml:math id="M170" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C (Fig. 6a). The
damage rates were quite stable for all temperatures tested, whether cells
were acclimated or exposed to short-term elevation of temperature, with mean
values around 0.075 for PAB and 0.032 for PAR treatment (Fig. 6b). The <inline-formula><mml:math id="M171" display="inline"><mml:mi>r</mml:mi></mml:math></inline-formula> : <inline-formula><mml:math id="M172" display="inline"><mml:mi>k</mml:mi></mml:math></inline-formula>
ratio increased with temperature in the range of 15–25 <inline-formula><mml:math id="M173" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C,
reaching relatively stable values of around 1.50 for PAR, and around 1.0 for
the PAB treatment (Fig. 6c).</p>
      <p>Under dim light, the rate constants for recovery of PAR-exposed <italic>Skeletonema</italic> sp. were around
0.10–0.15 min<inline-formula><mml:math id="M174" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in the range of 15–30 <inline-formula><mml:math id="M175" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C, but increased
significantly to around 0.30 at 35 <inline-formula><mml:math id="M176" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C (<inline-formula><mml:math id="M177" display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.01; Fig. 7a).
The rate constant for recovery of PAR-exposed <italic>Nitzschia</italic> sp. was relatively stable, around
0.25 min<inline-formula><mml:math id="M178" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, across the range of applied temperature (Fig. 7b). The rate
constant for recovery of PAB-exposed <italic>Skeletonema</italic> sp. showed an increasing pattern from 0.05
to 0.17 min<inline-formula><mml:math id="M179" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> in the range of 15–25 <inline-formula><mml:math id="M180" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C but decreased
significantly at 30 <inline-formula><mml:math id="M181" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C (<inline-formula><mml:math id="M182" display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> &lt; 0.05); at 35<inline-formula><mml:math id="M183" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C values
were unable to be estimated due to poor fitting of data points (Fig. 7c). No
consistent trend was found for the rate constant for recovery of PAB-exposed <italic>Nitzschia</italic> sp., which varied around 0.10–0.15 min<inline-formula><mml:math id="M184" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>, across the range of
applied temperature (Fig. 7d).</p>
</sec>
<sec id="Ch1.S4" sec-type="conclusions">
  <title>Discussion</title>
      <p>In the present study, we found that both benthic and planktonic diatoms were
less inhibited by UVR under moderately increased temperature, while the
benthic species was more resistant to UVR under the highest temperature
applied, which suggests that the tolerance to environmental stress was
associated with the niche environment where the microalgae are living, which
would in turn determine the biogeographic properties of the species.
These findings imply that temperature is a key factor that mediates the
response of diatoms to UVR, while different species have developed distinct
mechanisms in response to their particular niche environments (Laviale et
al., 2015).</p>
      <p>As a basic environmental factor, temperature affects all metabolic pathways,
and extreme or sub-optimal conditions are often encountered by various
organisms in nature (Mosby and Smith, 2015). The growth response of
phytoplankton to temperature varies from species to species but often shows
a unimodal pattern (Brown et al., 2004; Chen, 2015). For the applied
temperature range in the present study, the growth rate of the benthic
species showed a slight response, while growth increased with temperature to
a greater extent in the planktonic species, particularly above 25 <inline-formula><mml:math id="M185" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C.
However, life forms in the natural environment are affected by multiple
stressors concomitantly (Boyd et al., 2015). For instance, recent studies
have demonstrated that increased temperature would affect phytoplankton
interactively with light intensity (Edwards et al., 2016) and could
alleviate UV direct inhibition in some sensitive species (Halac et al.,
2014). Moreover, in diatoms short-term changes in temperature showed a
greater interaction with UV radiation than did long-term exposure, which was
particularly important for intertidal benthic species (Sobrino and Neale,
2007). In the present study, when species were acclimated under sub-optimal
temperature (15 <inline-formula><mml:math id="M186" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C), both showed obvious sensitivity to UVR (Fig. 1). During the recovery period, however, the effective quantum yield of the
benthic diatom could rapidly regain the highest values within 12 min
irrespective of the incubation temperature. The planktonic diatom, however,
only performed better under short-term elevated temperature. This suggests
that the benthic species could have broader adaptability to cope with the
highly varied temperature environment they frequently experience (Laviale et
al., 2015).</p>
      <p>The operation of PSII is sensitive to light intensity as well as quality.
High levels of PAR and UVR can usually induce significant damage to this
complex, while the de novo synthesis of protein can replace the damaged
subunit (Aro et al., 1993; Lavaud et al., 2016). The damage rate (<inline-formula><mml:math id="M187" display="inline"><mml:mrow><mml:mi>k</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula>, which
represents the efficiency of detrimental effects, showed a different
response for the two species in this study; in the planktonic species, <inline-formula><mml:math id="M188" display="inline"><mml:mi>k</mml:mi></mml:math></inline-formula> was
sensitive to temperature change, with the lowest value at the medium
temperature, but it was quite stable in the benthic species at all temperatures
tested. This could be attributed to a decrease in electron transport, or
intrinsic differences between benthic and planktonic species (Melis, 1999;
Nitta et al., 2005), since <inline-formula><mml:math id="M189" display="inline"><mml:mi>k</mml:mi></mml:math></inline-formula> of the planktonic <italic>Thalassiosira</italic>  sp. also showed sensitivity to
temperature change (Sobrino and Neale, 2007). The repair rates (<inline-formula><mml:math id="M190" display="inline"><mml:mrow><mml:mi>r</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> and the
ratio of <inline-formula><mml:math id="M191" display="inline"><mml:mi>r</mml:mi></mml:math></inline-formula> to <inline-formula><mml:math id="M192" display="inline"><mml:mi>k</mml:mi></mml:math></inline-formula> further demonstrated that the planktonic species had a
relatively lower optimal temperature in response to UVR, with the highest <inline-formula><mml:math id="M193" display="inline"><mml:mi>r</mml:mi></mml:math></inline-formula> : <inline-formula><mml:math id="M194" display="inline"><mml:mi>k</mml:mi></mml:math></inline-formula> and lowest UV inhibition at 25 <inline-formula><mml:math id="M195" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C. In contrast, in the benthic
species <inline-formula><mml:math id="M196" display="inline"><mml:mi>r</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M197" display="inline"><mml:mi>r</mml:mi></mml:math></inline-formula> : <inline-formula><mml:math id="M198" display="inline"><mml:mi>k</mml:mi></mml:math></inline-formula> increased steadily and reached relatively stable values at
the highest temperature, and this coincided with lower UV inhibition,
implying that although acclimated in laboratory conditions for weeks, this
species still had an active mechanism to respond to high temperature and
UVR, as might occur in its natural niche environment (Laviale et al., 2015).</p>
      <p>In addition to repair processes that are initiated after damage, UV-absorbing compounds could directly screen out part of the detrimental
radiation, protecting cellular organelles from UV damage (Garcia-Pichel and
Castenholz, 1993). In diatoms, however, the spectra of methanol extracts
showed only a small absorbance peak in the UVR. Unlike xanthophyll-cycle-related pigments, UV-absorbing compounds (UVACs) are inducible and only
synthesized under long-term UV exposure, indicating that UVACs are not a
major protecting mechanism for laboratory-cultured diatoms (Helbling et al.,
1996). However, the xanthophyll cycle could respond quickly under
photo-inhibitory conditions and has been shown to be a major mechanism in
diatoms in response to high light or UV (Cartaxana et al., 2013; Zudaire and
Roy, 2001). Therefore, the relatively higher absorption in the blue range
for benthic species might indicate that temperature enhances the synthesis
of xanthophyll-related pigments (Havaux and Tardy, 1996). The differences in
absorption spectra of extracted pigments suggest that to better understand
the spectral-dependent responses to UV radiation, biological weighting
functions should be introduced in this kind of work (Neale et al., 2014).</p>
      <p>The temperature-dependent response to UVR has major implications for
phytoplankton. With the continuing emission of greenhouse gases, the surface
seawater temperature is predicted to increase by up to 4 <inline-formula><mml:math id="M199" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C by
the end of this century (New et al., 2011), and this could potentially
re-shape the phytoplankton assemblages (Thomas et al., 2012). While the
situation might be more complex in the natural environment with the
consideration of interaction of UVR with other factors (Beardall et al.,
2009), for unicellular green algae, an increase of temperature could
mitigate UVR harm for temperate species, while exacerbating UV inhibition
for polar species (Wong et al., 2015). Moreover, the tolerance of
phytoplankton to extreme temperature would be latitude-dependent; for
tropical areas where the temperature is already high, an increase of
temperature reduced the richness of phytoplankton (Thomas et al.,
2012).</p>
      <p>The present study showed a differential response to UV radiation for two
diatoms from contrasting niches. As predicted, the benthic species had a
higher tolerance to the combination of extreme temperature and UV radiation,
which can be attributed to the environment in which were living. Below the
optimal temperature, both species performed better in response to UV
radiation under elevated temperature, suggesting that the natural variation
of temperature due to changes in the heat flux from the sun or
meteorological events would alter the extent of UV effects on primary
producers, and therefore the aquatic ecosystem (Häder et al., 2011).
Furthermore, considering the projected global warming scenarios, UV
radiation could impose different impacts on phytoplankton with respect to
the regional differences (Beardall et al., 2009; Xie et al., 2010).</p>
</sec>

      
      </body>
    <back><notes notes-type="dataavailability">

      <p>Data in the present study are available at <ext-link xlink:href="https://doi.org/10.1594/PANGAEA.882597" ext-link-type="DOI">10.1594/PANGAEA.882597</ext-link> (Wu et al., 2017).</p>
  </notes><app-group>
        <supplementary-material position="anchor"><p><bold>The Supplement related to this article is available online at <inline-supplementary-material xlink:href="https://doi.org/10.5194/bg-14-5029-2017-supplement" xlink:title="pdf">https://doi.org/10.5194/bg-14-5029-2017-supplement</inline-supplementary-material>.</bold></p></supplementary-material>
        </app-group><notes notes-type="competinginterests">

      <p>The authors declare that they have no conflict of interest.</p>
  </notes><ack><title>Acknowledgements</title><p>This study was supported by the National Natural Science Foundation of China
(41476097), the Fundamental Research Funds for the Central Universities
(2016B12814, 2017B41714), the Priority Academic Program Development of Jiangsu Higher Education Institutions, and Lianyungang 521 Talent Projects. We thank two
anonymous reviewers and Patrick Neale for their helpful comments.
<?xmltex \hack{\newline}?><?xmltex \hack{\newline}?>
Edited by: Gerhard Herndl <?xmltex \hack{\newline}?>
Reviewed by: Patrick Neale and two anonymous referees</p></ack><ref-list>
    <title>References</title>

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    <!--<article-title-html>Differential photosynthetic responses of marine planktonic and benthic diatoms to ultraviolet radiation under various temperature regimes</article-title-html>
<abstract-html><p class="p">We studied the photophysiological responses to ultraviolet radiation (UVR) of
two diatoms, isolated from different environmental niches. Both species
showed the highest sensitivity to UV radiation under relatively low
temperature, while they were less inhibited under moderately increased
temperature. Under the highest temperature applied in this study, the benthic
diatom <i>Nitzschia</i> sp. showed minimal sensitivity to UV radiation,
while inhibition of the planktonic species, <i>Skeletonema</i> sp.,
increased further compared with that at the growth temperature. These
photochemical responses were linked to values for the repair and damage
processes within the cell; higher damage rates and lower repair rates were
observed for <i>Skeletonema</i> sp. under suboptimal temperature, while for
<i>Nitzschia</i> sp., repair rates increased and damage rates were stable
within the applied temperature range. Our results suggested that the response
of the microalgae to UV radiation correlated with their niche environments,
the periodic exposure to extreme temperatures promoting the resistance of the
benthic species to the combination of high temperature and UV radiation.</p></abstract-html>
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