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  <front>
    <journal-meta><journal-id journal-id-type="publisher">BG</journal-id><journal-title-group>
    <journal-title>Biogeosciences</journal-title>
    <abbrev-journal-title abbrev-type="publisher">BG</abbrev-journal-title><abbrev-journal-title abbrev-type="nlm-ta">Biogeosciences</abbrev-journal-title>
  </journal-title-group><issn pub-type="epub">1726-4189</issn><publisher>
    <publisher-name>Copernicus Publications</publisher-name>
    <publisher-loc>Göttingen, Germany</publisher-loc>
  </publisher></journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.5194/bg-15-2945-2018</article-id><title-group><article-title>Footprint-weighted tile approach for a spruce forest and a nearby patchy clearing using the ACASA model</article-title><alt-title>Footprint-weighted tile approach</alt-title>
      </title-group><?xmltex \runningtitle{Footprint-weighted tile approach}?><?xmltex \runningauthor{K.~Gatzsche et~al.}?>
      <contrib-group>
        <contrib contrib-type="author" corresp="no" rid="aff1 aff2 aff6">
          <name><surname>Gatzsche</surname><given-names>Kathrin</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1 aff3 aff7">
          <name><surname>Babel</surname><given-names>Wolfgang</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff4 aff8">
          <name><surname>Falge</surname><given-names>Eva</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff5">
          <name><surname>Pyles</surname><given-names>Rex David</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff5">
          <name><surname>Paw U</surname><given-names>Kyaw Tha</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Raabe</surname><given-names>Armin</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="yes" rid="aff1 aff3">
          <name><surname>Foken</surname><given-names>Thomas</given-names></name>
          <email>thomas.foken@uni-bayreuth.de</email>
        <ext-link>https://orcid.org/0000-0003-4562-9083</ext-link></contrib>
        <aff id="aff1"><label>1</label><institution>University of Bayreuth, formerly the Department of Micrometeorology, Bayreuth, Germany</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>University of Leipzig, Leipzig Institute for Meteorology, Leipzig, Germany</institution>
        </aff>
        <aff id="aff3"><label>3</label><institution>University of Bayreuth, Bayreuth Center of Ecology and Environmental Research (BayCEER), Bayreuth, Germany</institution>
        </aff>
        <aff id="aff4"><label>4</label><institution>Max Planck Institute of Chemistry, Biogeochemistry Department, Mainz, Germany</institution>
        </aff>
        <aff id="aff5"><label>5</label><institution>University of California, Department of Land, Air and Water Resources, Davis, California, USA</institution>
        </aff>
        <aff id="aff6"><label>a</label><institution>now at: Leibniz Institute for Tropospheric Research (TROPOS), Department Modelling of<?xmltex \hack{\break}?> Atmospheric Processes, Leipzig, Germany</institution>
        </aff>
        <aff id="aff7"><label>b</label><institution>now at: University of Bayreuth, Micrometeorology Group, Bayreuth, Germany</institution>
        </aff>
        <aff id="aff8"><label>c</label><institution>now at: German Meteorological Service, Agrometeorological Research Center, Braunschweig, Germany</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Thomas Foken (thomas.foken@uni-bayreuth.de)</corresp></author-notes><pub-date><day>16</day><month>May</month><year>2018</year></pub-date>
      
      <volume>15</volume>
      <issue>9</issue>
      <fpage>2945</fpage><lpage>2960</lpage>
      <history>
        <date date-type="received"><day>25</day><month>October</month><year>2017</year></date>
           <date date-type="rev-request"><day>2</day><month>November</month><year>2017</year></date>
           <date date-type="rev-recd"><day>26</day><month>April</month><year>2018</year></date>
           <date date-type="accepted"><day>27</day><month>April</month><year>2018</year></date>
      </history>
      <permissions>
        
        
      <license license-type="open-access"><license-p>This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">https://creativecommons.org/licenses/by/4.0/</ext-link></license-p></license></permissions><self-uri xlink:href="https://bg.copernicus.org/articles/15/2945/2018/bg-15-2945-2018.html">This article is available from https://bg.copernicus.org/articles/15/2945/2018/bg-15-2945-2018.html</self-uri><self-uri xlink:href="https://bg.copernicus.org/articles/15/2945/2018/bg-15-2945-2018.pdf">The full text article is available as a PDF file from https://bg.copernicus.org/articles/15/2945/2018/bg-15-2945-2018.pdf</self-uri>
      <abstract>
    <p id="d1e186">The ACASA (Advanced Canopy–Atmosphere–Soil Algorithm) model, with
a higher-order closure for tall vegetation, has already been
successfully tested and validated for homogeneous spruce
forests. The aim of this paper is to test the model using
a footprint-weighted tile approach for a clearing with
a heterogeneous structure of the underlying surface. The comparison
with flux data shows a good agreement with a footprint-aggregated
tile approach of the model. However, the results of a comparison
with a tile approach on the basis of the mean land use
classification of the clearing is not significantly different. It is
assumed that the footprint model is not accurate enough to separate
small-scale heterogeneities. All measured fluxes are corrected by
forcing the energy balance closure of the test data either by
maintaining the measured Bowen ratio or by the attribution of the
residual depending on the fractions of sensible and latent heat flux
to the buoyancy flux. The comparison with the model, in which the
energy balance is closed, shows that the buoyancy correction for
Bowen ratios <inline-formula><mml:math id="M1" display="inline"><mml:mrow><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">1.5</mml:mn></mml:mrow></mml:math></inline-formula> better fits the measured data. For lower Bowen
ratios, the correction probably lies between the two methods, but the
amount of available data was too small to make a conclusion. With an
assumption of similarity between water and carbon dioxide fluxes,
no correction of the net ecosystem exchange is necessary for Bowen
ratios <inline-formula><mml:math id="M2" display="inline"><mml:mrow><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">1.5</mml:mn></mml:mrow></mml:math></inline-formula>.</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <title>Introduction</title>
      <p id="d1e216">The comparison of modeled and measured energy and matter fluxes in
a heterogeneous landscape is still a challenge. The fluxes measured
with the eddy covariance technique are related to all surfaces on the
upwind side of the measurements, and the influence of each surface on
the measured data is given by the footprint function. The comparison
of these flux measurements with one-dimensional models can be done over
a homogeneous surface easily or over a heterogeneous surface if the
model is parameterized for all surface characteristics and averaged
according to the percentage of each surface in the footprint
<xref ref-type="bibr" rid="bib1.bibx47" id="paren.1"><named-content content-type="pre">tile approach;</named-content></xref>. The footprint varies with
changing wind velocity and atmospheric stratification for each
half-hourly-derived flux, and consequently the tile approach must also be
modified every half hour. This approach was proposed by
<xref ref-type="bibr" rid="bib1.bibx18" id="normal.2"/> and successfully improved by <xref ref-type="bibr" rid="bib1.bibx27" id="normal.3"/> and
<xref ref-type="bibr" rid="bib1.bibx5" id="normal.4"/> for two separated surfaces. The tile approach is
based on the application of the eddy<?pagebreak page2946?> covariance method with the
correction of the storage term, which ignores any advection. The more
appropriate approach would use the generalized eddy covariance method
<xref ref-type="bibr" rid="bib1.bibx21" id="paren.5"/>, which includes the advection of matter and
fluxes. Unfortunately, matter advection could only be analyzed
experimentally under very idealized conditions up to now. Experimental
advection studies with an acceptable number of measurement points have
failed <xref ref-type="bibr" rid="bib1.bibx1 bib1.bibx2" id="paren.6"/>. Furthermore, the resolution of
available 3-D models <xref ref-type="bibr" rid="bib1.bibx59 bib1.bibx58" id="paren.7"/> is too large
(25–50 m) for the small-scale heterogeneities on the clearing
(5–10 m). For our case, an experimental advection experiment cannot
be realized and only an LES process study could be applied for
a single 1 h case <xref ref-type="bibr" rid="bib1.bibx35" id="paren.8"/>. Therefore, the one-dimensional
model with a tile approach according to the footprint of each
eddy covariance measurement is the only realistic approach.</p>
      <p id="d1e246">A further problem is the so-called unclosed energy balance. The energy
balance with turbulence measurements <xref ref-type="bibr" rid="bib1.bibx2" id="paren.9"><named-content content-type="pre">eddy covariance
method;</named-content></xref> is not closed by an amount of up to 30 %
according to the overview paper by <xref ref-type="bibr" rid="bib1.bibx15" id="normal.10"/>, while the models
close the energy balance by definition. The main reason for this is
most likely the presence of fluxes caused by larger turbulence
structures like secondary circulations <xref ref-type="bibr" rid="bib1.bibx15" id="paren.11"/>. Measurement
data must be corrected for energy balance closure before comparison
with model outputs can be made. The missing flux will be distributed
between the sensible and the latent heat flux according to the Bowen
ratio <xref ref-type="bibr" rid="bib1.bibx65" id="paren.12"/> or the buoyancy flux
<xref ref-type="bibr" rid="bib1.bibx6" id="paren.13"/>. Carbon and other trace gas fluxes have not
been corrected before the present study.</p>
      <p id="d1e266">Simulating the turbulent transfer for heterogeneous landscapes
utilizing a one-dimensional SVAT model (soil–vegetation–atmosphere
transfer) represents a multifaceted challenge. For forest, coherent
structures are a typical phenomenon of turbulent exchange
<xref ref-type="bibr" rid="bib1.bibx24 bib1.bibx4" id="paren.14"/>, and they can be measured with the
eddy covariance technique. However, coherent structures modify the
turbulent transfer of energy and matter in a manner that complicates
capturing them with models. Higher-order closure models are able to
overcome this problem <xref ref-type="bibr" rid="bib1.bibx9" id="paren.15"/>. In this study the
Advanced Canopy–Atmosphere–Soil Algorithm <xref ref-type="bibr" rid="bib1.bibx50" id="paren.16"><named-content content-type="pre">ACASA;</named-content></xref>
has been utilized with a third-order closure scheme
<xref ref-type="bibr" rid="bib1.bibx45" id="paren.17"/>, and a more exact resolution of the turbulent
structure for forest is provided. Thus, the ACASA model is much better
suited to handling coherent structures and counter gradients than
classical SVAT models with a first-order closure
<xref ref-type="bibr" rid="bib1.bibx61" id="paren.18"/>. <xref ref-type="bibr" rid="bib1.bibx12" id="normal.19"/> provide a summary of the
results of all model studies made in the last nearly 20 years at the
Waldstein–Weidenbrunnen site, without any discussion of specific
problems.</p>
      <p id="d1e290">This paper is based on the earlier study by <xref ref-type="bibr" rid="bib1.bibx12" id="normal.20"/>,
in which the ACASA model was insufficiently applied for the clearing and
compared with eddy covariance data. As a first guess, the tile
approach for the clearing was derived from the relative percentages of
the individual land cover classes of the whole clearing without any
selection according to the footprint. Furthermore, the measured fluxes
were corrected for the energy balance closure. The present paper
extends and completes the first paper in the following directions:
(i) For the clearing, a more precise concept of the comparison of flux
measurements with 1-D modeling using a tile approach according to the
half-hourly footprints. (ii) for the forest, a detailed discussion of
the two different energy balance correction methods is provided. The
inclusion of both surfaces in this study is necessary because flux
studies often use MODIS (Moderate-Resolution Imaging
Spectroradiometer) data with a grid size of 500 or 250 m. Since
the windthrow in 2007, the satellite sees about 50 % forest and
50 % clearing in the relevant grid.</p>
</sec>
<sec id="Ch1.S2">
  <title>Material and methods</title>
<sec id="Ch1.S2.SS1">
  <title>Waldstein–Weidenbrunnen site</title>
      <p id="d1e307">The experimental data for the initialization of the model and the
evaluation of its outputs were collected during the third intensive
observation period (IOP3) of the EGER (ExchanGE processes in
mountainous Regions) project <xref ref-type="bibr" rid="bib1.bibx21" id="paren.21"/>. The IOP3 campaign took
place from 13 June to 26 July 2011. The EGER project mainly aimed at
capturing the relevant exchange processes within the
soil–vegetation–atmosphere framework and their interactions at
different scales, and the work in IOP3 thereby focused on the role of
surface heterogeneities in atmospheric exchange and chemistry as well
as biogeochemistry.</p>
      <p id="d1e313">The experimental site (50<inline-formula><mml:math id="M3" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>8<inline-formula><mml:math id="M4" display="inline"><mml:msup><mml:mi/><mml:mo>′</mml:mo></mml:msup></mml:math></inline-formula> N,
11<inline-formula><mml:math id="M5" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>52<inline-formula><mml:math id="M6" display="inline"><mml:msup><mml:mi/><mml:mo>′</mml:mo></mml:msup></mml:math></inline-formula> E, about 775 m a.s.l.) is part of the
Bayreuth Centre of Ecology and Environmental Research (BayCEER) and
lies in the upper part of the Lehstenbach catchment
(Fig. <xref ref-type="fig" rid="Ch1.F1"/>a). It is situated between two
hilltops: to the southwest the Großer Waldstein
(879 m a.s.l.)  and the Bergkopf (857 m a.s.l.) to the
northeast. The Lehstenbach catchment is part of the slopes of the
Waldstein in the northwestern part of the Fichtelgebirge, a low mountain range in
northeastern Bavaria, Germany and is mostly densely forested.</p>
      <?pagebreak page2947?><p id="d1e354">The measurements of IOP3 were carried out in a spruce forest next to
the FLUXNET site Waldstein–Weidenbrunnen (DE-Bay) and in a nearby
clearing with heterogeneous low vegetation located to the south of the
FLUXNET site (Fig. <xref ref-type="fig" rid="Ch1.F1"/>b). The clearing was created by
a windthrow on 18 January 2007 that was induced by the European
windstorm Kyrill <xref ref-type="bibr" rid="bib1.bibx21" id="paren.22"/>. The vegetation of the measurement
site is heterogeneous and there is a slope of 3<inline-formula><mml:math id="M7" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> from the
pine forest to the clearing (from north to south). A more detailed
description of the surrounding topography is provided by
<xref ref-type="bibr" rid="bib1.bibx22" id="normal.23"/>.
<?xmltex \hack{\newpage}?></p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F1" specific-use="star"><caption><p id="d1e377"><bold>(a)</bold> Location of the BayCEER research site at the
Waldstein hillsides in the Fichtelgebirge
<xref ref-type="bibr" rid="bib1.bibx26" id="paren.24"><named-content content-type="pre">modified from</named-content></xref>, published with the kind
permission of Springer, Berlin,
Heidelberg, 2004. <bold>(b)</bold> Aerial picture of
the patchy landscape showing meteorological towers and masts as well as
the measuring points that are important for this study. MT: main
tower, TT: turbulence tower, TM: turbulence mast; modified from
<xref ref-type="bibr" rid="bib1.bibx22" id="normal.25"/> and published with the kind permission of
Springer, Berlin, Heidelberg, 2017, and
Google Earth, 2015.</p></caption>
          <?xmltex \igopts{width=497.923228pt}?><graphic xlink:href="https://bg.copernicus.org/articles/15/2945/2018/bg-15-2945-2018-f01.jpg"/>

        </fig>

      <p id="d1e400">The forest consists mainly of Norway spruce (<italic>Picea abies</italic>)
with a stand height of about 27 m and a leaf area index (LAI) of
4.8 <inline-formula><mml:math id="M8" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> <xref ref-type="bibr" rid="bib1.bibx22" id="paren.26"/>. The stand age is circa
60 years (estimate from 2013) and the forest structure is
characterized by an open trunk space and a dense crown
space. Most needles are located between 0.5 <inline-formula><mml:math id="M9" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msubsup><mml:mi>h</mml:mi><mml:mi mathvariant="normal">c</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msubsup></mml:mrow></mml:math></inline-formula>
and 0.9 <inline-formula><mml:math id="M10" display="inline"><mml:mrow><mml:mi>z</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msubsup><mml:mi>h</mml:mi><mml:mi mathvariant="normal">c</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msubsup></mml:mrow></mml:math></inline-formula>, where <inline-formula><mml:math id="M11" display="inline"><mml:mi>z</mml:mi></mml:math></inline-formula> is the measurement height
and <inline-formula><mml:math id="M12" display="inline"><mml:mrow><mml:msub><mml:mi>h</mml:mi><mml:mi mathvariant="normal">c</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> the stand height of 27 m. In the ground area,
the understory comprises two-thirds crinkled hair grass
(<italic>Deschampsia flexuosa</italic>) and moss (together LAI <inline-formula><mml:math id="M13" display="inline"><mml:mrow><mml:mo>≤</mml:mo><mml:mn mathvariant="normal">0.5</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M14" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>), and one-third is characterized by blueberry
(<italic>Vaccinium myrtillus</italic>) and young Norway spruce (<italic>Picea abies</italic>, together plant area index (PAI) of 3.5 <inline-formula><mml:math id="M15" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>). For more details,
see <xref ref-type="bibr" rid="bib1.bibx21" id="normal.27"/>. The information regarding the overstory trees is
summarized in Table <xref ref-type="table" rid="Ch1.T1"/>. The vegetation of the
clearing is a conglomeration of young spruce trees, blueberry
(<italic>Vaccinium myrtillus</italic>), and different grasses
(e.g., <italic>Calamagrostis, Agrostis, Poaceae</italic>). However, deadwood
and bare soil are also elements of the clearing, and together
they make up one-third of the ground cover of this area. The clearing
also contains approximately 2 % young deciduous trees: alder
(<italic>Alnus</italic>), maple (<italic>Acer</italic>), beech (<italic>Fagus</italic>), and
sorbus (<italic>Sorbus</italic>), with a greater canopy height than the
remaining species. Due to the heterogeneous vegetation at the
clearing, no distinct mean canopy height can be estimated for the
clearing. Table <xref ref-type="table" rid="Ch1.T1"/> provides an overview of the
species present and their mean canopy height.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T1" specific-use="star"><caption><p id="d1e575">Vegetation at the forest and the Köhlerloh clearing with their main characteristics according to <xref ref-type="bibr" rid="bib1.bibx22" id="normal.28"/>.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="5">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1">Species</oasis:entry>
         <oasis:entry colname="col2">Ground</oasis:entry>
         <oasis:entry colname="col3">Height</oasis:entry>
         <oasis:entry colname="col4">PAI</oasis:entry>
         <oasis:entry colname="col5">MSC<inline-formula><mml:math id="M18" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">a</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">cover</oasis:entry>
         <oasis:entry colname="col3">in</oasis:entry>
         <oasis:entry colname="col4">in</oasis:entry>
         <oasis:entry colname="col5">in</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">in %</oasis:entry>
         <oasis:entry colname="col3">m</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M19" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"><inline-formula><mml:math id="M20" display="inline"><mml:mrow><mml:mi mathvariant="normal">mol</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula></oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry namest="col1" nameend="col5">Forest </oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Spruce (<italic>Picea abies</italic>)</oasis:entry>
         <oasis:entry colname="col2">100</oasis:entry>
         <oasis:entry colname="col3">27</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M21" display="inline"><mml:mrow><mml:mn mathvariant="normal">5.6</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">2.1</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">0.001</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry namest="col1" nameend="col5">Clearing </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Crinkled hair grass (<italic>Deschampsia flexuosa</italic>)</oasis:entry>
         <oasis:entry colname="col2">21.7</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M22" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.17</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.05</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M23" display="inline"><mml:mrow><mml:mn mathvariant="normal">2.65</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">1.08</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">0.127</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Young spruce (<italic>Picea abies</italic>)</oasis:entry>
         <oasis:entry colname="col2">21.4</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M24" display="inline"><mml:mrow><mml:mn mathvariant="normal">1.21</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.50</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M25" display="inline"><mml:mrow><mml:mn mathvariant="normal">8.67</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">2.29</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">0.054</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Blueberry (<italic>Vaccinium myrtillus</italic>)</oasis:entry>
         <oasis:entry colname="col2">15.9</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M26" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.27</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.10</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M27" display="inline"><mml:mrow><mml:mn mathvariant="normal">3.46</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">1.05</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">0.050</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Reed, bent, and true grasses (<italic>Calamagrostis, Agrostis, Poaceae</italic>)</oasis:entry>
         <oasis:entry colname="col2">9.0</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M28" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.42</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.11</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M29" display="inline"><mml:mrow><mml:mn mathvariant="normal">3.43</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">1.07</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">0.049</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Rush and sedge family (<italic>Juncaceae, Cyperaceae</italic>)</oasis:entry>
         <oasis:entry colname="col2">3.1</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M30" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.74</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.13</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M31" display="inline"><mml:mrow><mml:mn mathvariant="normal">1.77</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.60</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">0.002</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Other herbaceous<inline-formula><mml:math id="M32" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">b</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">1.6</oasis:entry>
         <oasis:entry colname="col3">/</oasis:entry>
         <oasis:entry colname="col4">/</oasis:entry>
         <oasis:entry colname="col5">0.002</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Moss</oasis:entry>
         <oasis:entry colname="col2">0.9</oasis:entry>
         <oasis:entry colname="col3">/</oasis:entry>
         <oasis:entry colname="col4">/</oasis:entry>
         <oasis:entry colname="col5">/</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Dead grass, bare soil</oasis:entry>
         <oasis:entry colname="col2">7.2</oasis:entry>
         <oasis:entry colname="col3">/</oasis:entry>
         <oasis:entry colname="col4">/</oasis:entry>
         <oasis:entry colname="col5">/</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Deadwood</oasis:entry>
         <oasis:entry colname="col2">18.8</oasis:entry>
         <oasis:entry colname="col3">/</oasis:entry>
         <oasis:entry colname="col4">/</oasis:entry>
         <oasis:entry colname="col5">/</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Small ditches</oasis:entry>
         <oasis:entry colname="col2">0.2</oasis:entry>
         <oasis:entry colname="col3">/</oasis:entry>
         <oasis:entry colname="col4">/</oasis:entry>
         <oasis:entry colname="col5">/</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table><table-wrap-foot><p id="d1e581"><inline-formula><mml:math id="M16" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">a</mml:mi></mml:msup></mml:math></inline-formula> MSC stands for minimal stomata conductance and is a model parameter utilized in ACASA.<?xmltex \hack{\\}?><inline-formula><mml:math id="M17" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">b</mml:mi></mml:msup></mml:math></inline-formula> This includes <italic>Digitalis purpurea</italic> (common foxglove), <italic>Epilobium angustifolium</italic> (willow herb), and <italic>Urtica dioica</italic> (stinging nettle).</p></table-wrap-foot></table-wrap>

</sec>
<sec id="Ch1.S2.SS2">
  <title>Experimental setup and data</title>
      <p id="d1e1089">During IOP3, high-frequency turbulence measurements were conducted at
different measurement towers (Fig. <xref ref-type="fig" rid="Ch1.F1"/>b). For this study,
the data from the towers in the forest (MT, TT) and the
turbulence mast (TM) at the clearing  have been especially utilized. The towers
and masts were generally equipped with 3-D sonic anemometers to
enable the collection of information about wind components (<inline-formula><mml:math id="M33" display="inline"><mml:mi>u</mml:mi></mml:math></inline-formula>, <inline-formula><mml:math id="M34" display="inline"><mml:mi>v</mml:mi></mml:math></inline-formula>, <inline-formula><mml:math id="M35" display="inline"><mml:mi>w</mml:mi></mml:math></inline-formula>)
and the sonic temperature (<inline-formula><mml:math id="M36" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">S</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula>). High-frequency gas
analyzers for carbon dioxide (<inline-formula><mml:math id="M37" display="inline"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:msub></mml:mrow></mml:math></inline-formula>) and water vapor (<inline-formula><mml:math id="M38" display="inline"><mml:mi>q</mml:mi></mml:math></inline-formula>)
were installed in conjunction with sonic anemometers. This allowed the
turbulent exchange for forest and clearing to be investigated with the
devices as summarized in Table <xref ref-type="table" rid="Ch1.T2"/>, and this has been
utilized for comparison with simulations. Raw flux data (20 Hz) have
been processed with the TK3 software <xref ref-type="bibr" rid="bib1.bibx41" id="paren.29"/>. The flux data
have been additionally classified by their quality according to the
classification scheme by <xref ref-type="bibr" rid="bib1.bibx19" id="normal.30"/>. For comparison with model
results, only data with quality flags of 6 or  better have been
utilized. Furthermore, the flux measurements have been energy balance
corrected with the methods described in Sect. <xref ref-type="sec" rid="Ch1.S2.SS4"/>.</p>
      <p id="d1e1159">The ACASA model needs half-hourly meteorological input values as well
as mean values of soil temperature and soil moisture for
initialization. These input values (see Table <xref ref-type="table" rid="Ch1.T2"/>) are
provided by standard measurements at the Pflanzgarten
(Fig. <xref ref-type="fig" rid="Ch1.F1"/>b) and measurements at the main tower (MT) for
the spruce forest as and at the turbulence mast (TM) for the
clearing. Table <xref ref-type="table" rid="Ch1.T2"/> provides an overview of the
meteorological input data for the two simulated sites and the
corresponding instrumentation.</p>
      <p id="d1e1168">Three golden day periods (GDPs) were selected within IOP3 because of
fair weather conditions and predominantly good performance of the
measurement devices. The first GDP was from 26 to 29 June 2011
(corresponding to the 177th to 180th day of the year, DOY). On the last
3 days of this period, clear-sky conditions prevailed until
14:00 as
did moderate westerly (26 and 27 June)  or easterly (28 and 29 June) winds. The second GDP occurred from 4 to 8 July 2011 (DOY:
185 to 189), with the best weather conditions on 6 and 7 July and
partly overcast sky on the rest of the days. The wind in this period
was weak and blew from the west (4, 7, and 8 July) or east (5 and 6 July). Minor
amounts of precipitation were measured on 4 and 8 July. For the last
GDP from 14 to 17 July 2011 (DOY: 195 to 198) data are missing for the
clearing at 5.5 m.</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T2" specific-use="star"><caption><p id="d1e1174">Meteorological instrumentation for the determination of the
sensible and the latent heat flux as well as the net ecosystem
exchange (NEE)  for forest and clearing at different measurement
towers in  distinct heights, using the eddy covariance technique
(with the  frequency of 20 Hz applied as indicated), and
additionally, the  most important input parameter of the model
(for  this purpose the mean <inline-formula><mml:math id="M39" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentrations have been
averaged  from the turbulence data). Documentation of the complete
data  set is available in <xref ref-type="bibr" rid="bib1.bibx16" id="normal.31"/>.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="4">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="justify" colwidth="140pt"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Measurement site</oasis:entry>
         <oasis:entry colname="col2">Parameter</oasis:entry>
         <oasis:entry colname="col3">Height</oasis:entry>
         <oasis:entry colname="col4">Device</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">Pflanzgarten</oasis:entry>
         <oasis:entry colname="col2">Precipitation</oasis:entry>
         <oasis:entry colname="col3">1 m</oasis:entry>
         <oasis:entry colname="col4">OMC 212, Adolf Thies GmbH &amp; Co. KG</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">Pressure</oasis:entry>
         <oasis:entry colname="col3">2 m</oasis:entry>
         <oasis:entry colname="col4">AB 60, Ammonit Gesellschaft für<?xmltex \hack{\hfill\break}?>Messtechnik mbH</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Weidenbrunnen,</oasis:entry>
         <oasis:entry colname="col2">Wind vector and sonic temperature (20 Hz)</oasis:entry>
         <oasis:entry colname="col3">32.5 m</oasis:entry>
         <oasis:entry colname="col4">USA-1, METEK GmbH</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">main tower (MT)</oasis:entry>
         <oasis:entry colname="col2">Humidity (20 <inline-formula><mml:math id="M43" display="inline"><mml:mi mathvariant="normal">Hz</mml:mi></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col3">32 m</oasis:entry>
         <oasis:entry colname="col4">LI-7000<inline-formula><mml:math id="M44" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">b</mml:mi></mml:msup></mml:math></inline-formula>, LI-COR Biosciences</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">Temperature and relative humidity</oasis:entry>
         <oasis:entry colname="col3">31 m</oasis:entry>
         <oasis:entry colname="col4">Frankenberger ventilated psychrometer, Theodor Friedrichs &amp; Co</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">Wind velocity</oasis:entry>
         <oasis:entry colname="col3">31 m</oasis:entry>
         <oasis:entry colname="col4">Cup anemometer,<?xmltex \hack{\hfill\break}?>Theodor Friedrichs &amp; Co</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">Upwelling and downwelling shortwave radiation</oasis:entry>
         <oasis:entry colname="col3">29.5 m</oasis:entry>
         <oasis:entry colname="col4">CM 14, Kipp &amp; Zonen</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">Upwelling and downwelling longwave radiation</oasis:entry>
         <oasis:entry colname="col3">29.5 m</oasis:entry>
         <oasis:entry colname="col4">CG 2, Kipp &amp; Zonen</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">Soil heat flux and temperature profile</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M45" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.08 m</oasis:entry>
         <oasis:entry colname="col4">HFT, Campbell Sci. Inc.</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Weidenbrunnen,</oasis:entry>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M46" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration (20 Hz)</oasis:entry>
         <oasis:entry colname="col3">36 m</oasis:entry>
         <oasis:entry colname="col4">LI-7500<inline-formula><mml:math id="M47" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">c</mml:mi></mml:msup></mml:math></inline-formula>, LI-COR Biosciences</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">turbulence tower (TT)</oasis:entry>
         <oasis:entry colname="col2">Wind vector (20 Hz)</oasis:entry>
         <oasis:entry colname="col3">36 m</oasis:entry>
         <oasis:entry colname="col4">USA-1, METEK</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Köhlerloh,</oasis:entry>
         <oasis:entry colname="col2">Wind vector and sonic temperature (20 <inline-formula><mml:math id="M48" display="inline"><mml:mi mathvariant="normal">Hz</mml:mi></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col3">2.25 m/5.5 m</oasis:entry>
         <oasis:entry colname="col4">CSAT3, Campbell Sci. Inc.</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">turbulence mast (TM)</oasis:entry>
         <oasis:entry colname="col2">Humidity (20 <inline-formula><mml:math id="M49" display="inline"><mml:mi mathvariant="normal">Hz</mml:mi></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col3">2.25 m/5.5 m</oasis:entry>
         <oasis:entry colname="col4">LI-7000<inline-formula><mml:math id="M50" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">b</mml:mi></mml:msup></mml:math></inline-formula>/LI-7500<inline-formula><mml:math id="M51" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">c</mml:mi></mml:msup></mml:math></inline-formula>,<?xmltex \hack{\hfill\break}?>LI-COR Biosciences<inline-formula><mml:math id="M52" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">a</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"><inline-formula><mml:math id="M53" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration (20 <inline-formula><mml:math id="M54" display="inline"><mml:mi mathvariant="normal">Hz</mml:mi></mml:math></inline-formula>)</oasis:entry>
         <oasis:entry colname="col3">2.25 m/5.5 m</oasis:entry>
         <oasis:entry colname="col4">LI-7000<inline-formula><mml:math id="M55" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">b</mml:mi></mml:msup></mml:math></inline-formula>/LI-7500<inline-formula><mml:math id="M56" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">c</mml:mi></mml:msup></mml:math></inline-formula>,<?xmltex \hack{\hfill\break}?>LI-COR Biosciences<inline-formula><mml:math id="M57" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">a</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">Upwelling and downwelling shortwave radiation</oasis:entry>
         <oasis:entry colname="col3">2.0 m</oasis:entry>
         <oasis:entry colname="col4">CNR4, Kipp &amp; Zonen</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">Upwelling and downwelling longwave radiation</oasis:entry>
         <oasis:entry colname="col3">2.0 m</oasis:entry>
         <oasis:entry colname="col4">CNR4, Kipp &amp; Zonen</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">Soil heat flux and temperature profile</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M58" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.15 m</oasis:entry>
         <oasis:entry colname="col4">HP3, Rimco</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table><table-wrap-foot><p id="d1e1191"><inline-formula><mml:math id="M40" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">a</mml:mi></mml:msup></mml:math></inline-formula> LI-7000 at 2.25 m and LI-7500 at 5.5 m.<?xmltex \hack{\\}?><inline-formula><mml:math id="M41" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">b</mml:mi></mml:msup></mml:math></inline-formula> Closed-path gas analyzer, <inline-formula><mml:math id="M42" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">c</mml:mi></mml:msup></mml:math></inline-formula> open-path gas analyzer.
</p></table-wrap-foot></table-wrap>

</sec>
<sec id="Ch1.S2.SS3">
  <title>The ACASA model</title>
      <p id="d1e1647">ACASA <xref ref-type="bibr" rid="bib1.bibx50" id="paren.32"/> was utilized to simulate the turbulent transfer
of heat, water vapor, and <inline-formula><mml:math id="M59" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> for spruce forest and
clearing. ACASA is a multilayer SVAT model developed at the
University of California, Davis. The main feature of ACASA is that the
turbulent transfer within and above the canopy is calculated by
a diabatic, third-order closure method, which is based on the
theoretical work of <xref ref-type="bibr" rid="bib1.bibx45 bib1.bibx46" id="normal.33"/>. The multilayer
structure of ACASA is represented by 20 evenly distributed atmospheric
layers, which reach from trunk space to twice the canopy height, and
by 15 soil layers. For the calculation of leaf, stem, and soil surface
temperatures, the fourth-order polynomial scheme of <xref ref-type="bibr" rid="bib1.bibx48" id="normal.34"/> is
incorporated. Utilizing this polynomial allows for the calculation of the
temperatures of these components without making substantial errors in
the case of significant deviations from the ambient temperature. The
model was considerably updated by the University of California, Davis
<xref ref-type="bibr" rid="bib1.bibx50 bib1.bibx51" id="paren.35"/> and is still in use
<xref ref-type="bibr" rid="bib1.bibx13" id="paren.36"/>. For this study, the ACASA model was adapted from
a version of April 2013.</p>
      <p id="d1e1677">Direct and diffuse radiation can be absorbed, transmitted, or
reflected by the canopy, whereby these processes are dependent on the
leaf and branch distribution of the plants. For this purpose, the
aboveground biomass is distributed in 10 different leaf angle classes
<xref ref-type="bibr" rid="bib1.bibx44" id="paren.37"/>. In order to enable a preferably exact allocation
of the energy to sensible and latent heat fluxes, a leaf energy
balance equation has to be solved. Plant physiological feedback to
micro-environmental conditions is incorporated by the approaches of
<xref ref-type="bibr" rid="bib1.bibx37" id="normal.38"/> and <xref ref-type="bibr" rid="bib1.bibx7" id="normal.39"/> to the Ball–Berry stomatal
conductance combined with photosynthetic rates calculated after an
equation of <xref ref-type="bibr" rid="bib1.bibx14" id="normal.40"/>, whereby coupling follows the standards of
<xref ref-type="bibr" rid="bib1.bibx62" id="normal.41"/>. ACASA also includes canopy heat storage, which<?pagebreak page2948?> is
mainly important for tall vegetation, and canopy interception of
precipitation. For thermal and hydrological aspects the soil model is
based on the one-dimensional diffusion equation <xref ref-type="bibr" rid="bib1.bibx8" id="paren.42"/> as
incorporated in MAPS <xref ref-type="bibr" rid="bib1.bibx56 bib1.bibx57" id="normal.43"><named-content content-type="pre">Mesoscale Analysis and Prediction
System;</named-content></xref>.</p>
      <?pagebreak page2949?><p id="d1e1704">About 10 years ago the University of Bayreuth started to work with
ACASA. The first issue was to use a sensitivity analysis to check
whether the model could be applied for a Central European spruce
forest <xref ref-type="bibr" rid="bib1.bibx60" id="paren.44"/>. We also found some model-specific
problems, and the model was again updated by the University of
California, Davis. Using the updated model, a first study for the
Waldstein–Weidenbrunnen site was published <xref ref-type="bibr" rid="bib1.bibx61" id="paren.45"/>. This
study showed that the ACASA model is more accurate (in comparison to
a K-approach model) when coherent structures dominate at night, which
has been investigated in many experiments and summarized by
<xref ref-type="bibr" rid="bib1.bibx64" id="normal.46"/>. The model was changed by <xref ref-type="bibr" rid="bib1.bibx61" id="normal.47"/> for the
spruce-specific parameterizations in three parts. The first change
relates to the soil respiration calculations and had already been
examined by <xref ref-type="bibr" rid="bib1.bibx60" id="normal.48"/> for spruce. The second change was made
in the calculation of photosynthesis according to <xref ref-type="bibr" rid="bib1.bibx11" id="normal.49"/>
because temperatures less than 10 <inline-formula><mml:math id="M60" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C are very common at the
experimental site. The third adjustment relates to the day respiration
for leaves because <xref ref-type="bibr" rid="bib1.bibx63" id="normal.50"/> quantified the day respiration
as about one-half of the night respiration rate. Furthermore,
<xref ref-type="bibr" rid="bib1.bibx12" id="normal.51"/> determined several parameters of the plants of
the clearing <xref ref-type="bibr" rid="bib1.bibx12" id="paren.52"><named-content content-type="pre">see Table 16.1 of</named-content></xref>.</p>
</sec>
<sec id="Ch1.S2.SS4">
  <title>Energy balance correction</title>
      <p id="d1e1752">The eddy covariance data on sensible heat, latent heat, and carbon
dioxide flux have been energy balance corrected for comparison
with the simulations.
<?xmltex \hack{\newpage}?></p>
      <p id="d1e1756">For the correction of the energy fluxes, the residual (Res)
arises from the following equation:

                <disp-formula id="Ch1.E1" content-type="numbered"><mml:math id="M61" display="block"><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mtext>Res</mml:mtext><mml:mo>=</mml:mo><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">S</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:mi>H</mml:mi><mml:mo>-</mml:mo><mml:mi>L</mml:mi><mml:mi>E</mml:mi><mml:mo>-</mml:mo><mml:mi>G</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>S</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          where <inline-formula><mml:math id="M62" display="inline"><mml:mrow><mml:msub><mml:mi>Q</mml:mi><mml:mi mathvariant="normal">S</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> denotes net radiation, <inline-formula><mml:math id="M63" display="inline"><mml:mi>H</mml:mi></mml:math></inline-formula> sensible heat flux,
<italic>LE</italic> latent heat flux, <inline-formula><mml:math id="M64" display="inline"><mml:mi>G</mml:mi></mml:math></inline-formula> the ground flux heat, and <inline-formula><mml:math id="M65" display="inline"><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>S</mml:mi></mml:mrow></mml:math></inline-formula> the heat storage term of the aboveground biomass, which was determined according to the investigations
of <xref ref-type="bibr" rid="bib1.bibx32" id="normal.53"/> and <xref ref-type="bibr" rid="bib1.bibx39" id="normal.54"/>. Here, the heat storage
term was only estimated for the spruce forest because of its larger
biomass compared to the vegetation in the clearing. The heat storage
was calculated with the following relation:

                <disp-formula id="Ch1.E2" content-type="numbered"><mml:math id="M66" display="block"><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>S</mml:mi><mml:mo>=</mml:mo><mml:msub><mml:mi>m</mml:mi><mml:mi mathvariant="normal">f</mml:mi></mml:msub><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">f</mml:mi></mml:msub><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mo>(</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">a</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mi>t</mml:mi><mml:mo>)</mml:mo><mml:mo>-</mml:mo><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">a</mml:mi></mml:msub><mml:mo>(</mml:mo><mml:mi>t</mml:mi><mml:mo>-</mml:mo><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>t</mml:mi><mml:mo>)</mml:mo><mml:mo>)</mml:mo></mml:mrow><mml:mrow><mml:mi mathvariant="normal">Δ</mml:mi><mml:mi>t</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>,</mml:mo></mml:mrow></mml:math></disp-formula>

          with <inline-formula><mml:math id="M67" display="inline"><mml:mrow><mml:msub><mml:mi>m</mml:mi><mml:mi mathvariant="normal">f</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> the aboveground biomass of the forest,
<inline-formula><mml:math id="M68" display="inline"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">f</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> the specific heat capacity of wood (<inline-formula><mml:math id="M69" display="inline"><mml:mrow><mml:msub><mml:mi>c</mml:mi><mml:mi mathvariant="normal">f</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1702.8</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M70" display="inline"><mml:mrow><mml:mi mathvariant="normal">J</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">kg</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">K</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>), and <inline-formula><mml:math id="M71" display="inline"><mml:mrow><mml:msub><mml:mi>T</mml:mi><mml:mi mathvariant="normal">a</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> the air
temperature in the spruce canopy.  In this study, two different
methods for energy balance correction have been applied to the
measurements of IOP3. The first correction method is introduced by
<xref ref-type="bibr" rid="bib1.bibx65" id="normal.55"/> and preserves the<?pagebreak page2950?> Bowen ratio. This method is usually
utilized for the correction of heat fluxes under the assumption of
measuring errors, but requires their scalar similarity. Henceforth,
this method is abbreviated as EBC-Bo. The second correction method
accounts for near-surface secondary circulations, which transport more
sensible heat. Therefore, the alternative correction method (EBC-HB)
proposed by <xref ref-type="bibr" rid="bib1.bibx6" id="normal.56"/> utilizes the buoyancy flux
ratio. Here, for the typical range of the Bowen ratio, more residual
energy is ascribed to the sensible heat flux, as was done in several
studies <xref ref-type="bibr" rid="bib1.bibx20" id="paren.57"/>. The difference to the EBC-Bo correction is
especially pronounced for low Bowen ratios. At night, the
applicability of the corrections is limited due to the occurrence of
minor or negative heat fluxes.</p>
      <p id="d1e1995">The discrepancy between measured and simulated NEE can be an effect of
the unclosed energy balance on the <inline-formula><mml:math id="M72" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> fluxes. Therefore, we
propose a new correction method on the basis of the good scalar
similarity between the humidity and the carbon dioxide concentration
mainly in the first part of the day (for scalar similarity see
<xref ref-type="bibr" rid="bib1.bibx55" id="altparen.58"/>), while the similarity between the temperature and
other scalars often fails <xref ref-type="bibr" rid="bib1.bibx49" id="paren.59"/>. The measured NEE is
corrected by referring to the energy-balance-corrected latent heat
flux, which is introduced in <xref ref-type="bibr" rid="bib1.bibx12" id="normal.60"/>. For this purpose,
the ratio <inline-formula><mml:math id="M73" display="inline"><mml:mi>k</mml:mi></mml:math></inline-formula> between the corrected and the uncorrected latent heat
fluxes is calculated for both correction methods:

                <disp-formula id="Ch1.E3" content-type="numbered"><mml:math id="M74" display="block"><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:msub><mml:mi>k</mml:mi><mml:mtext>Bo</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi>L</mml:mi><mml:msub><mml:mi>E</mml:mi><mml:mtext>Bo</mml:mtext></mml:msub></mml:mrow><mml:mrow><mml:mi>L</mml:mi><mml:mi>E</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mspace linebreak="nobreak" width="1em"/><mml:mtext>and</mml:mtext><mml:mspace linebreak="nobreak" width="1em"/><mml:msub><mml:mi>k</mml:mi><mml:mtext>HB</mml:mtext></mml:msub><mml:mo>=</mml:mo><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:mi>L</mml:mi><mml:msub><mml:mi>E</mml:mi><mml:mtext>HB</mml:mtext></mml:msub></mml:mrow><mml:mrow><mml:mi>L</mml:mi><mml:mi>E</mml:mi></mml:mrow></mml:mfrac></mml:mstyle><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>

          The measured NEE value was then multiplied by the respective
correction factor <inline-formula><mml:math id="M75" display="inline"><mml:mrow><mml:msub><mml:mi>k</mml:mi><mml:mtext>Bo</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> or <inline-formula><mml:math id="M76" display="inline"><mml:mrow><mml:msub><mml:mi>k</mml:mi><mml:mtext>HB</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula>. This correction
method is proposed for the NEE for the first time and the
applicability of this approach is therefore evaluated. The correction
is not very large. Therefore, until shown otherwise, the energy
balance correction can be neglected for scalar fluxes.</p>
</sec>
<sec id="Ch1.S2.SS5">
  <title>Footprint model</title>
      <p id="d1e2112">Footprint models are currently a commonly used tool for the
identification of the source area of flux measurements
<xref ref-type="bibr" rid="bib1.bibx36" id="paren.61"/>. For the footprint calculations of this study,
a Lagrangian footprint model is applied <xref ref-type="bibr" rid="bib1.bibx52 bib1.bibx53" id="paren.62"/>, whereby a spectral method for the nonlinear flux
averaging of surface characteristics (friction, roughness length)
according to <xref ref-type="bibr" rid="bib1.bibx31" id="normal.63"/> is employed <xref ref-type="bibr" rid="bib1.bibx28" id="paren.64"/>
because the linear averaging of the roughness length (input parameter
of footprint models) is inaccurate. The sensitivity of the Lagrangian
footprint model to the turbulence statistics was tested by
<xref ref-type="bibr" rid="bib1.bibx29" id="normal.65"/> for the Waldstein–Weidenbrunnen site. A footprint
climatology and footprint studies, including the effect of the
footprint on the data quality, are available from
<xref ref-type="bibr" rid="bib1.bibx23" id="normal.66"/>. On average, more than 80 % of the target
area is forest. Only for southerly winds and stable stratification
does the Köhlerloh clearing have a significant influence on the
fluxes measured at the main tower (MT).</p>
      <p id="d1e2134">In a study by <xref ref-type="bibr" rid="bib1.bibx54" id="normal.67"/> the land use for the
Waldstein–Weidenbrunnen site was determined and mapped, and this was
tested for footprint applications. Due to the distinct small-scale
heterogeneities, the land cover map applied here has a high resolution
(<inline-formula><mml:math id="M77" display="inline"><mml:mrow><mml:mn mathvariant="normal">4.5</mml:mn><mml:mo>×</mml:mo><mml:mn mathvariant="normal">4.5</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M78" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>). This grid size is in agreement with the
size of the typical heterogeneities and the recommendations for
footprint analyses for low measuring heights <xref ref-type="bibr" rid="bib1.bibx36" id="paren.68"/>. The
calculated footprints for 30 min time periods have been used to
generate tile approaches of the model.</p>
</sec>
</sec>
<sec id="Ch1.S3">
  <title>Results and discussion</title>
<sec id="Ch1.S3.SS1">
  <?xmltex \opttitle{Footprint climatology for the K\"{o}hlerloh clearing}?><title>Footprint climatology for the Köhlerloh clearing</title>
      <p id="d1e2179">The footprint climatology of the mainly forested
Waldstein–Weidenbrunnen site is well described in many publications
like <xref ref-type="bibr" rid="bib1.bibx30" id="normal.69"/> and summarized by <xref ref-type="bibr" rid="bib1.bibx23" id="normal.70"/>. In
the following, the footprint climatology of the clearing site
Köhlerloh (turbulence mast, TM) is analyzed. Only for southerly
winds and stable stratification does the Köhlerloh clearing have
a significant influence on the fluxes measured at the main tower
(MT). Therefore, only the footprint of the Köhlerloh site
(turbulence mast, TM) is analyzed in the following.</p>
      <?pagebreak page2951?><p id="d1e2188">As an overview, the footprint climatology for the period from 26 June
to 17 July 2011 has been calculated and is
a superposition of all individual
footprints. Figure <xref ref-type="fig" rid="Ch1.F2"/> shows the footprint
climatology for the turbulence mast (TM) in two different heights at the
clearing. The main difference in the footprint climatology between the
different stratifications appears for stable conditions at both
measuring heights. For unstable and neutral stratification, mainly the
clearing contributes to the turbulent fluxes at the TM. For stable stratification and northerly wind directions, the
spruce forest has an additional influence on the measured turbulent flux
at the TM (see Fig. <xref ref-type="fig" rid="Ch1.F2"/>). For a 5.5 m measuring
height, the footprint source areas are generally
enhanced and/or extended. Regarding the stable stratification case, the
northwesterly part of the spruce forest is only included in the outer
source region of the turbulent flux at a 2.25 m measuring height and
is more pronounced for a 5.5 m measuring height. Additionally, a slight
influence from the northeasterly spruce areas connected to the forest
edge is calculated for a 5.5 m measuring height.
<?xmltex \hack{\newpage}?></p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F2" specific-use="star"><caption><p id="d1e2198">Footprint climatology of the Köhlerloh clearing (26 June
to 17 July 2011) at the turbulence mast (TM) for the three stability
classes and the combination of all classes; <bold>(a)</bold> left four
panels at a 2.25 m measuring height; <bold>(b)</bold> right four panels
at a 5.5 m measuring height. Here, four different land use classes
are considered, with the herb layer being composed of
<italic>Deschampsia</italic>, <italic>Calamagrostis</italic>, <italic>Juncus</italic>, and
<italic>Vaccinium</italic>. Distances are given in meters.</p></caption>
          <?xmltex \igopts{width=497.923228pt}?><graphic xlink:href="https://bg.copernicus.org/articles/15/2945/2018/bg-15-2945-2018-f02.pdf"/>

        </fig>

</sec>
<sec id="Ch1.S3.SS2">
  <title>Comparison of modeled and measured fluxes</title>
<sec id="Ch1.S3.SS2.SSS1">
  <title>Daily cycles</title>
      <p id="d1e2237"><xref ref-type="bibr" rid="bib1.bibx12" id="normal.71"/> have already compared the sensible and the
latent heat flux as well as the NEE for the forest (MT) and the
clearing (TM, 2.25 m). They found that the sensible heat flux
corrected with the buoyancy flux (EBC-HB) agrees better with the
modeled data than the flux corrected with the Bowen ratio (EBC-Bo) for
the first golden day period. The result for the latent heat flux is
similar and the NEE shows no significant differences. The NEE over the
clearing was only about 50 % of the value over the forest.</p>
      <p id="d1e2242">In the following, we compare for the clearing the measured and
the energy-balance-corrected fluxes with the tile approach of the
model according to (i) the relevant footprint near the measurement
point and (ii) the land cover distribution of the whole clearing. It
was found that for the footprint of a 2.25 m height there are no
significant differences between the modeling approaches due to the
small size of the footprint (not shown). The results for TM with the
footprint for a 5.5 m measuring height are shown in
Fig. <xref ref-type="fig" rid="Ch1.F3"/> for the first and in
Fig. <xref ref-type="fig" rid="Ch1.F4"/> for the second golden day period. The
difference between the two model approaches is more significant in the
first period, which had a Bowen ratio <inline-formula><mml:math id="M79" display="inline"><mml:mrow><mml:mtext>Bo</mml:mtext><mml:mo>≥</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula>, while in the
second period the Bowen ratio was often below 1. The differences in the
land use characteristics were more dominant under drier conditions.</p>
      <p id="d1e2261">From the visual comparison of Figs. <xref ref-type="fig" rid="Ch1.F3"/> and <xref ref-type="fig" rid="Ch1.F4"/> it has been found that the buoyancy-corrected
sensible and latent heat fluxes agree better with the model
than the Bowen-ratio-corrected fluxes. The scatter is too large to
allow any trend for the NEE to be seen. There is also no clear finding
as to whether the footprint-weighted tile approach of the model
(non-weighted approach not shown) gives better results. The integrated
fluxes of the tile approaches for the whole clearing and the measured
fluxes within the footprint of the turbulence mast for 5.5 m of height
do not differ significantly, except for stable atmospheric
stratification (Fig. <xref ref-type="fig" rid="Ch1.F2"/>). The land cover characteristics and soil water content
probably have a significant influence. This can be seen by the high measured
latent heat fluxes in the first golden day period (see
Fig. <xref ref-type="fig" rid="Ch1.F3"/>). Regression analyses are discussed in the
following section for both weighting methods.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F3" specific-use="star"><caption><p id="d1e2274">Comparison of ACASA model simulations with measured turbulent
fluxes at the TM (5.5 m measurement height) for the first GDP;
<bold>(a)</bold> sensible heat (<inline-formula><mml:math id="M80" display="inline"><mml:mi>H</mml:mi></mml:math></inline-formula>), <bold>(b)</bold> latent heat (<italic>LE</italic>), and
<bold>(c)</bold> net ecosystem exchange (NEE). The black solid line
displays ACASA simulations weighted by the mean plant distribution
of the whole clearing and the blue solid line indicates ACASA
simulations weighted by different plant classes within the footprint
of the flux measurements. Energy-balance-corrected flux measurements
are shown by black circles for the correction utilizing the buoyancy
flux ratio (EBC-HB) and red triangles for correction with the Bowen
ratio (EBC-Bo).</p></caption>
            <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://bg.copernicus.org/articles/15/2945/2018/bg-15-2945-2018-f03.pdf"/>

          </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F4" specific-use="star"><caption><p id="d1e2305">Same as Fig. <xref ref-type="fig" rid="Ch1.F3"/> for the second GDP.</p></caption>
            <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://bg.copernicus.org/articles/15/2945/2018/bg-15-2945-2018-f04.pdf"/>

          </fig>

</sec>
<sec id="Ch1.S3.SS2.SSS2">
  <title>Regression analyses</title>
      <p id="d1e2322">Neither the modeled nor the measured fluxes are free of errors and
could be used as an independent parameter. Therefore, the errors are
assumed to be similar and an orthogonal regression analysis for evenly
distributed errors has been applied <xref ref-type="bibr" rid="bib1.bibx10" id="paren.72"/>. The regression
has been done for the first two golden day periods for the forest and
the clearing (with and without the footprint-weighted tile approach) for
the sensible (<inline-formula><mml:math id="M81" display="inline"><mml:mi>H</mml:mi></mml:math></inline-formula>) and the latent (<italic>LE</italic>) heat flux as well as the net
ecosystem exchange (NEE). Furthermore, the available energy (AE), as
the difference between net radiation and the ground heat flux
<xref ref-type="bibr" rid="bib1.bibx38" id="paren.73"/> as well as the heat storage in the biomass (the
latter is only determined for forest), is shown. The results are given
in Tables <xref ref-type="table" rid="Ch1.T3"/> and <xref ref-type="table" rid="Ch1.T4"/> and are partly illustrated in Fig. <xref ref-type="fig" rid="Ch1.F5"/>. Due to
a non-equal distribution of the data points, the data have been binned
for flux classes of the modeled data, whereby the number of bins has
been chosen so that the measured flux data are equally
distributed. Therefore, the observed trends in the data have not been
artificially shifted due to the applied binning, and the
excluded data (for cases with <inline-formula><mml:math id="M82" display="inline"><mml:mrow><mml:mtext>Bo</mml:mtext><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula> and too-small nighttime
fluxes) have merely been located in one
bin. Figure <xref ref-type="fig" rid="Ch1.F5"/> is created without the confidence
intervals for the regression curves because the fluxes only marginally
scatter around the average regression curve and for the sake of
improved clarity. Tables <xref ref-type="table" rid="Ch1.T3"/> and
<xref ref-type="table" rid="Ch1.T4"/> additionally contain the results for the
regressions through the point of origin because of the large
intercepts observed in regression analysis. Nevertheless, the slope
did not vary substantially between the two regression methods.</p>
      <p id="d1e2366">The analysis of the eddy covariance data shows that in all cases,
except for the latent heat in the second golden day period, the fluxes
are underestimated and an energy balance correction is necessary to
obtain an agreement with the modeled data. All results are very
similar for both golden day periods. For a discussion of the results
included in Fig. <xref ref-type="fig" rid="Ch1.F5"/> as well as
Tables <xref ref-type="table" rid="Ch1.T3"/> and <xref ref-type="table" rid="Ch1.T4"/>, the
available energy is also shown and the therein considered fluxes are
summarized. The net radiation is underestimated by the model by about
5–7 % for both sites (not shown). The ground heat flux and the
storage in the biomass both amount to less than 10 % of the net
radiation, with a large scatter between the measured and the modeled
data. A significant difference from the <inline-formula><mml:math id="M83" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>:</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> relationship has only
been found for the ground heat flux of the clearing, which is higher
by a factor of 2 for the experimental data. Due to the installation of
the sensors the ground was probably less covered with vegetation and
could thus store more energy. For the forest site, the underestimation
of the available energy by the model was only about 4 %. For the
clearing site, the modeled available energy has a constant offset of
30 <inline-formula><mml:math id="M84" display="inline"><mml:mrow><mml:mi mathvariant="normal">W</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> and was therefore higher than the experimental
data.</p>
      <p id="d1e2404">The effect of the different energy balance corrections is not equal
for both sites. For the forest site, both corrections of the sensible
heat flux agree quite well with the model, with slightly better values
for the buoyancy correction. For the latent heat flux of the forest
site, the measurements corrected according to the Bowen ratio are in
better agreement with the simulations. For <inline-formula><mml:math id="M85" display="inline"><mml:mrow><mml:mtext>Bo</mml:mtext><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula>, the
buoyancy correction, which assumes that only convection is the reason
for the unclosed energy balance, overestimates the energy balance
closure correction and the true correction might lie between the two correction methods. The turbulent fluxes might be slightly higher than
the modeled fluxes because of the<?pagebreak page2952?> measured available energy being
about 4 % higher, as can be seen after applying both corrections
(see also Sect. <xref ref-type="sec" rid="Ch1.S3.SS2.SSS3"/>).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F5" specific-use="star"><caption><p id="d1e2423">Example of the regression analysis of the measured and the
simulated (ACASA) data for GDP 1 for <bold>(a, b)</bold>
the sensible heat flux (<inline-formula><mml:math id="M86" display="inline"><mml:mi>H</mml:mi></mml:math></inline-formula>); <bold>(c, d)</bold> the
latent heat flux (<italic>LE</italic>); <bold>(e, f)</bold> the net
ecosystem exchange (NEE); and <bold>(g, h)</bold> the
available energy (AE) above the forest <bold>(a, c, e, g)</bold> and
above the clearing at 5.5 m of height (footprint-weighted modeled
fluxes; <bold>b</bold>, <bold>d</bold>, <bold>f</bold>, <bold>h</bold>) for
uncorrected (black), Bowen-ratio-corrected (blue), and buoyancy-corrected (red) eddy covariance data. The regression lines are based
on binned data for 50 <inline-formula><mml:math id="M87" display="inline"><mml:mrow><mml:mi mathvariant="normal">W</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> or
<inline-formula><mml:math id="M88" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mo>/</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M89" display="inline"><mml:mrow><mml:mi mathvariant="normal">µ</mml:mi><mml:mi mathvariant="normal">mol</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> classes of the modeled data
and an orthogonal regression. The analysis has been achieved for the
first and second golden day periods, with
Tables <xref ref-type="table" rid="Ch1.T3"/> and <xref ref-type="table" rid="Ch1.T4"/> displaying
the results of an orthogonal regression with and without
assuming a zero intercept for the clearing and the forest,
respectively.</p></caption>
            <?xmltex \igopts{width=398.338583pt}?><graphic xlink:href="https://bg.copernicus.org/articles/15/2945/2018/bg-15-2945-2018-f05.pdf"/>

          </fig>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T3" specific-use="star"><caption><p id="d1e2536">Results of the comparison of the measured and the modeled
flux data for different correction methods with an orthogonal
regression for binned data points for the clearing with and
without footprint weighting (for details, see
Fig. <xref ref-type="fig" rid="Ch1.F5"/>; absolute  values in
<inline-formula><mml:math id="M90" display="inline"><mml:mrow><mml:mi mathvariant="normal">W</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> or <inline-formula><mml:math id="M91" display="inline"><mml:mrow><mml:mi mathvariant="normal">µ</mml:mi><mml:mi mathvariant="normal">mol</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> for the NEE).</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="11">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:colspec colnum="6" colname="col6" align="right"/>
     <oasis:colspec colnum="7" colname="col7" align="right"/>
     <oasis:colspec colnum="8" colname="col8" align="right"/>
     <oasis:colspec colnum="9" colname="col9" align="right"/>
     <oasis:colspec colnum="10" colname="col10" align="right"/>
     <oasis:colspec colnum="11" colname="col11" align="right"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1">Flux</oasis:entry>
         <oasis:entry namest="col2" nameend="col6" align="center">First golden day period, 26–28 June </oasis:entry>
         <oasis:entry namest="col7" nameend="col11" align="center">Second golden day period,  4–8 July </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">correction</oasis:entry>
         <oasis:entry colname="col2">Slope</oasis:entry>
         <oasis:entry colname="col3">Absolute</oasis:entry>
         <oasis:entry colname="col4">Slope</oasis:entry>
         <oasis:entry colname="col5">Corr.</oasis:entry>
         <oasis:entry colname="col6">Data</oasis:entry>
         <oasis:entry colname="col7">Slope</oasis:entry>
         <oasis:entry colname="col8">Absolute</oasis:entry>
         <oasis:entry colname="col9">Slope</oasis:entry>
         <oasis:entry colname="col10">Corr.</oasis:entry>
         <oasis:entry colname="col11">Data</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">value</oasis:entry>
         <oasis:entry colname="col4">zero</oasis:entry>
         <oasis:entry colname="col5">coeff.</oasis:entry>
         <oasis:entry colname="col6">bins</oasis:entry>
         <oasis:entry colname="col7"/>
         <oasis:entry colname="col8">value</oasis:entry>
         <oasis:entry colname="col9">zero</oasis:entry>
         <oasis:entry colname="col10"/>
         <oasis:entry colname="col11">bins</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4">intercept<inline-formula><mml:math id="M94" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">a</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"/>
         <oasis:entry colname="col6"/>
         <oasis:entry colname="col7"/>
         <oasis:entry colname="col8">intercept<inline-formula><mml:math id="M95" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">a</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col9"/>
         <oasis:entry colname="col10"/>
         <oasis:entry colname="col11"/>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col9">Sensible heat flux, clearing 5.5 m, footprint-weighted tile approach </oasis:entry>
         <oasis:entry colname="col10"/>
         <oasis:entry colname="col11"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">No</oasis:entry>
         <oasis:entry colname="col2">0.50</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M96" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>17.3</oasis:entry>
         <oasis:entry colname="col4">0.45</oasis:entry>
         <oasis:entry colname="col5">0.99</oasis:entry>
         <oasis:entry colname="col6">9</oasis:entry>
         <oasis:entry colname="col7">0.52</oasis:entry>
         <oasis:entry colname="col8"><inline-formula><mml:math id="M97" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>15.8</oasis:entry>
         <oasis:entry colname="col9">0.46</oasis:entry>
         <oasis:entry colname="col10">0.98</oasis:entry>
         <oasis:entry colname="col11">9</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Buoyancy</oasis:entry>
         <oasis:entry colname="col2">0.84</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M98" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>27.9</oasis:entry>
         <oasis:entry colname="col4">0.76</oasis:entry>
         <oasis:entry colname="col5">0.99</oasis:entry>
         <oasis:entry colname="col6">9</oasis:entry>
         <oasis:entry colname="col7">0.72</oasis:entry>
         <oasis:entry colname="col8">9.3</oasis:entry>
         <oasis:entry colname="col9">0.75</oasis:entry>
         <oasis:entry colname="col10">0.99</oasis:entry>
         <oasis:entry colname="col11">9</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Bowen</oasis:entry>
         <oasis:entry colname="col2">0.68</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M99" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>25.7</oasis:entry>
         <oasis:entry colname="col4">0.61</oasis:entry>
         <oasis:entry colname="col5">1.00</oasis:entry>
         <oasis:entry colname="col6">9</oasis:entry>
         <oasis:entry colname="col7">0.61</oasis:entry>
         <oasis:entry colname="col8"><inline-formula><mml:math id="M100" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>8.0</oasis:entry>
         <oasis:entry colname="col9">0.59</oasis:entry>
         <oasis:entry colname="col10">0.99</oasis:entry>
         <oasis:entry colname="col11">9</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col9">Sensible heat flux, clearing 5.5 m,     non-footprint-weighted tile approach </oasis:entry>
         <oasis:entry colname="col10"/>
         <oasis:entry colname="col11"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">No</oasis:entry>
         <oasis:entry colname="col2">0.61</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M101" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>25.4</oasis:entry>
         <oasis:entry colname="col4">0.51</oasis:entry>
         <oasis:entry colname="col5">1.00</oasis:entry>
         <oasis:entry colname="col6">7</oasis:entry>
         <oasis:entry colname="col7">0.59</oasis:entry>
         <oasis:entry colname="col8"><inline-formula><mml:math id="M102" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>22.7</oasis:entry>
         <oasis:entry colname="col9">0.51</oasis:entry>
         <oasis:entry colname="col10">0.98</oasis:entry>
         <oasis:entry colname="col11">8</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Buoyancy</oasis:entry>
         <oasis:entry colname="col2">1.01</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M103" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>34.9</oasis:entry>
         <oasis:entry colname="col4">0.77</oasis:entry>
         <oasis:entry colname="col5">0.99</oasis:entry>
         <oasis:entry colname="col6">7</oasis:entry>
         <oasis:entry colname="col7">0.84</oasis:entry>
         <oasis:entry colname="col8">8.3</oasis:entry>
         <oasis:entry colname="col9">0.87</oasis:entry>
         <oasis:entry colname="col10">1.00</oasis:entry>
         <oasis:entry colname="col11">8</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Bowen</oasis:entry>
         <oasis:entry colname="col2">0.83</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M104" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>36.1</oasis:entry>
         <oasis:entry colname="col4">0.70</oasis:entry>
         <oasis:entry colname="col5">1.00</oasis:entry>
         <oasis:entry colname="col6">7</oasis:entry>
         <oasis:entry colname="col7">0.71</oasis:entry>
         <oasis:entry colname="col8"><inline-formula><mml:math id="M105" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>11.7</oasis:entry>
         <oasis:entry colname="col9">0.67</oasis:entry>
         <oasis:entry colname="col10">0.99</oasis:entry>
         <oasis:entry colname="col11">8</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col9">Latent heat flux, clearing 5.5 m,      footprint-weighted tile approach </oasis:entry>
         <oasis:entry colname="col10"/>
         <oasis:entry colname="col11"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">No</oasis:entry>
         <oasis:entry colname="col2">0.84</oasis:entry>
         <oasis:entry colname="col3">46.4</oasis:entry>
         <oasis:entry colname="col4">1.14</oasis:entry>
         <oasis:entry colname="col5">0.98</oasis:entry>
         <oasis:entry colname="col6">5</oasis:entry>
         <oasis:entry colname="col7">1.02</oasis:entry>
         <oasis:entry colname="col8">13.7</oasis:entry>
         <oasis:entry colname="col9">1.09</oasis:entry>
         <oasis:entry colname="col10">0.98</oasis:entry>
         <oasis:entry colname="col11">6</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Buoyancy</oasis:entry>
         <oasis:entry colname="col2">0.89</oasis:entry>
         <oasis:entry colname="col3">48.1</oasis:entry>
         <oasis:entry colname="col4">1.20</oasis:entry>
         <oasis:entry colname="col5">0.98</oasis:entry>
         <oasis:entry colname="col6">5</oasis:entry>
         <oasis:entry colname="col7">1.05</oasis:entry>
         <oasis:entry colname="col8">20.4</oasis:entry>
         <oasis:entry colname="col9">1.16</oasis:entry>
         <oasis:entry colname="col10">0.99</oasis:entry>
         <oasis:entry colname="col11">6</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Bowen</oasis:entry>
         <oasis:entry colname="col2">1.20</oasis:entry>
         <oasis:entry colname="col3">49.1</oasis:entry>
         <oasis:entry colname="col4">1.51</oasis:entry>
         <oasis:entry colname="col5">1.00</oasis:entry>
         <oasis:entry colname="col6">5</oasis:entry>
         <oasis:entry colname="col7">1.25</oasis:entry>
         <oasis:entry colname="col8">36.5</oasis:entry>
         <oasis:entry colname="col9">1.44</oasis:entry>
         <oasis:entry colname="col10">0.99</oasis:entry>
         <oasis:entry colname="col11">6</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col9">Latent heat flux, clearing 5.5 m, non-footprint-weighted tile approach </oasis:entry>
         <oasis:entry colname="col10"/>
         <oasis:entry colname="col11"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">No</oasis:entry>
         <oasis:entry colname="col2">0.84</oasis:entry>
         <oasis:entry colname="col3">36.4</oasis:entry>
         <oasis:entry colname="col4">1.07</oasis:entry>
         <oasis:entry colname="col5">0.97</oasis:entry>
         <oasis:entry colname="col6">6</oasis:entry>
         <oasis:entry colname="col7">1.03</oasis:entry>
         <oasis:entry colname="col8"><inline-formula><mml:math id="M106" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>5.3</oasis:entry>
         <oasis:entry colname="col9">1.00</oasis:entry>
         <oasis:entry colname="col10">0.98</oasis:entry>
         <oasis:entry colname="col11">6</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Buoyancy</oasis:entry>
         <oasis:entry colname="col2">0.92</oasis:entry>
         <oasis:entry colname="col3">34.0</oasis:entry>
         <oasis:entry colname="col4">1.14</oasis:entry>
         <oasis:entry colname="col5">0.97</oasis:entry>
         <oasis:entry colname="col6">6</oasis:entry>
         <oasis:entry colname="col7">1.05</oasis:entry>
         <oasis:entry colname="col8">1.8</oasis:entry>
         <oasis:entry colname="col9">1.06</oasis:entry>
         <oasis:entry colname="col10">0.98</oasis:entry>
         <oasis:entry colname="col11">6</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Bowen</oasis:entry>
         <oasis:entry colname="col2">1.19</oasis:entry>
         <oasis:entry colname="col3">39.2</oasis:entry>
         <oasis:entry colname="col4">1.43</oasis:entry>
         <oasis:entry colname="col5">0.99</oasis:entry>
         <oasis:entry colname="col6">6</oasis:entry>
         <oasis:entry colname="col7">1.16</oasis:entry>
         <oasis:entry colname="col8">29.5</oasis:entry>
         <oasis:entry colname="col9">1.31</oasis:entry>
         <oasis:entry colname="col10">0.99</oasis:entry>
         <oasis:entry colname="col11">6</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col9">NEE, clearing 5.5 m, footprint-weighted tile      approach </oasis:entry>
         <oasis:entry colname="col10"/>
         <oasis:entry colname="col11"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">No</oasis:entry>
         <oasis:entry colname="col2">0.53</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M107" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>1.0</oasis:entry>
         <oasis:entry colname="col4">0.69</oasis:entry>
         <oasis:entry colname="col5">0.88</oasis:entry>
         <oasis:entry colname="col6">5</oasis:entry>
         <oasis:entry colname="col7">0.52</oasis:entry>
         <oasis:entry colname="col8"><inline-formula><mml:math id="M108" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>2.3</oasis:entry>
         <oasis:entry colname="col9">0.84</oasis:entry>
         <oasis:entry colname="col10">0.94</oasis:entry>
         <oasis:entry colname="col11">7</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Buoyancy</oasis:entry>
         <oasis:entry colname="col2">0.55</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M109" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>1.2</oasis:entry>
         <oasis:entry colname="col4">0.74</oasis:entry>
         <oasis:entry colname="col5">0.87</oasis:entry>
         <oasis:entry colname="col6">5</oasis:entry>
         <oasis:entry colname="col7">0.55</oasis:entry>
         <oasis:entry colname="col8"><inline-formula><mml:math id="M110" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>2.6</oasis:entry>
         <oasis:entry colname="col9">0.90</oasis:entry>
         <oasis:entry colname="col10">0.94</oasis:entry>
         <oasis:entry colname="col11">7</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Bowen</oasis:entry>
         <oasis:entry colname="col2">0.66</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M111" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>1.7</oasis:entry>
         <oasis:entry colname="col4">0.94</oasis:entry>
         <oasis:entry colname="col5">0.86</oasis:entry>
         <oasis:entry colname="col6">5</oasis:entry>
         <oasis:entry colname="col7">0.66</oasis:entry>
         <oasis:entry colname="col8"><inline-formula><mml:math id="M112" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>3.9</oasis:entry>
         <oasis:entry colname="col9">1.20</oasis:entry>
         <oasis:entry colname="col10">0.94</oasis:entry>
         <oasis:entry colname="col11">7</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col9">NEE, clearing 5.5 m, non-footprint-weighted tile    approach </oasis:entry>
         <oasis:entry colname="col10"/>
         <oasis:entry colname="col11"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">No</oasis:entry>
         <oasis:entry colname="col2">0.64</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M113" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>1.9</oasis:entry>
         <oasis:entry colname="col4">1.04</oasis:entry>
         <oasis:entry colname="col5">0.98</oasis:entry>
         <oasis:entry colname="col6">5</oasis:entry>
         <oasis:entry colname="col7">0.74</oasis:entry>
         <oasis:entry colname="col8"><inline-formula><mml:math id="M114" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>3.0</oasis:entry>
         <oasis:entry colname="col9">1.25</oasis:entry>
         <oasis:entry colname="col10">0.98</oasis:entry>
         <oasis:entry colname="col11">6</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Buoyancy</oasis:entry>
         <oasis:entry colname="col2">0.62</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M115" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>2.1</oasis:entry>
         <oasis:entry colname="col4">1.08</oasis:entry>
         <oasis:entry colname="col5">0.98</oasis:entry>
         <oasis:entry colname="col6">5</oasis:entry>
         <oasis:entry colname="col7">0.76</oasis:entry>
         <oasis:entry colname="col8"><inline-formula><mml:math id="M116" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>3.3</oasis:entry>
         <oasis:entry colname="col9">1.33</oasis:entry>
         <oasis:entry colname="col10">0.98</oasis:entry>
         <oasis:entry colname="col11">6</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Bowen</oasis:entry>
         <oasis:entry colname="col2">0.55</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M117" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>3.1</oasis:entry>
         <oasis:entry colname="col4">1.25</oasis:entry>
         <oasis:entry colname="col5">0.97</oasis:entry>
         <oasis:entry colname="col6">5</oasis:entry>
         <oasis:entry colname="col7">0.89</oasis:entry>
         <oasis:entry colname="col8"><inline-formula><mml:math id="M118" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>4.7</oasis:entry>
         <oasis:entry colname="col9">1.71</oasis:entry>
         <oasis:entry colname="col10">0.97</oasis:entry>
         <oasis:entry colname="col11">6</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col9">AE, clearing 5.5 m, footprint-weighted tile     approach </oasis:entry>
         <oasis:entry colname="col10"/>
         <oasis:entry colname="col11"/>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Uniform<inline-formula><mml:math id="M119" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">b</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">0.99</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M120" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>30.0</oasis:entry>
         <oasis:entry colname="col4">0.93</oasis:entry>
         <oasis:entry colname="col5">1.00</oasis:entry>
         <oasis:entry colname="col6">16</oasis:entry>
         <oasis:entry colname="col7">0.97</oasis:entry>
         <oasis:entry colname="col8"><inline-formula><mml:math id="M121" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>18.2</oasis:entry>
         <oasis:entry colname="col9">0.93</oasis:entry>
         <oasis:entry colname="col10">1.00</oasis:entry>
         <oasis:entry colname="col11">15</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col9">AE, clearing 5.5 m, non-footprint-weighted tile approach </oasis:entry>
         <oasis:entry colname="col10"/>
         <oasis:entry colname="col11"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Uniform<inline-formula><mml:math id="M122" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">b</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">1.04</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M123" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>31.3</oasis:entry>
         <oasis:entry colname="col4">0.97</oasis:entry>
         <oasis:entry colname="col5">0.97</oasis:entry>
         <oasis:entry colname="col6">15</oasis:entry>
         <oasis:entry colname="col7">1.05</oasis:entry>
         <oasis:entry colname="col8"><inline-formula><mml:math id="M124" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>23.7</oasis:entry>
         <oasis:entry colname="col9">1.00</oasis:entry>
         <oasis:entry colname="col10">1.00</oasis:entry>
         <oasis:entry colname="col11">15</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table><table-wrap-foot><p id="d1e2586"><inline-formula><mml:math id="M92" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">a</mml:mi></mml:msup></mml:math></inline-formula> Orthogonal regression considering a zero intercept.<?xmltex \hack{\\}?><inline-formula><mml:math id="M93" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">b</mml:mi></mml:msup></mml:math></inline-formula> AE is the same for all three methods because the heat storage term of the canopy and the ground heat flux are uniformly estimated.</p></table-wrap-foot></table-wrap>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T4" specific-use="star"><caption><p id="d1e3773">Results of the comparison of the measured and the modeled flux data for different correction methods with an orthogonal regression for binned data points for the forest (absolute values in <inline-formula><mml:math id="M125" display="inline"><mml:mrow><mml:mi mathvariant="normal">W</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> or <inline-formula><mml:math id="M126" display="inline"><mml:mrow><mml:mi mathvariant="normal">µ</mml:mi><mml:mi mathvariant="normal">mol</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">s</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> for the NEE).</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="11">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:colspec colnum="6" colname="col6" align="right"/>
     <oasis:colspec colnum="7" colname="col7" align="right"/>
     <oasis:colspec colnum="8" colname="col8" align="right"/>
     <oasis:colspec colnum="9" colname="col9" align="right"/>
     <oasis:colspec colnum="10" colname="col10" align="right"/>
     <oasis:colspec colnum="11" colname="col11" align="right"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1">Flux</oasis:entry>
         <oasis:entry namest="col2" nameend="col6" align="center">First golden day period, 26–28 June </oasis:entry>
         <oasis:entry namest="col7" nameend="col11" align="center">Second golden day period,  4–8 July </oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">correction</oasis:entry>
         <oasis:entry colname="col2">Slope</oasis:entry>
         <oasis:entry colname="col3">Absolute</oasis:entry>
         <oasis:entry colname="col4">Slope</oasis:entry>
         <oasis:entry colname="col5">Corr.</oasis:entry>
         <oasis:entry colname="col6">Data</oasis:entry>
         <oasis:entry colname="col7">Slope</oasis:entry>
         <oasis:entry colname="col8">Absolute</oasis:entry>
         <oasis:entry colname="col9">Slope</oasis:entry>
         <oasis:entry colname="col10">Corr.</oasis:entry>
         <oasis:entry colname="col11">Data</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3">value</oasis:entry>
         <oasis:entry colname="col4">zero</oasis:entry>
         <oasis:entry colname="col5">coeff.</oasis:entry>
         <oasis:entry colname="col6">bins</oasis:entry>
         <oasis:entry colname="col7"/>
         <oasis:entry colname="col8">value</oasis:entry>
         <oasis:entry colname="col9">zero</oasis:entry>
         <oasis:entry colname="col10"/>
         <oasis:entry colname="col11">bins</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4">intercept<inline-formula><mml:math id="M129" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">a</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5"/>
         <oasis:entry colname="col6"/>
         <oasis:entry colname="col7"/>
         <oasis:entry colname="col8">intercept<inline-formula><mml:math id="M130" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">a</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col9"/>
         <oasis:entry colname="col10"/>
         <oasis:entry colname="col11"/>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col9">Sensible heat flux, forest 32 m </oasis:entry>
         <oasis:entry colname="col10"/>
         <oasis:entry colname="col11"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">No</oasis:entry>
         <oasis:entry colname="col2">0.63</oasis:entry>
         <oasis:entry colname="col3">18.4</oasis:entry>
         <oasis:entry colname="col4">0.69</oasis:entry>
         <oasis:entry colname="col5">0.98</oasis:entry>
         <oasis:entry colname="col6">11</oasis:entry>
         <oasis:entry colname="col7">0.69</oasis:entry>
         <oasis:entry colname="col8"><inline-formula><mml:math id="M131" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>25.7</oasis:entry>
         <oasis:entry colname="col9">0.61</oasis:entry>
         <oasis:entry colname="col10">0.95</oasis:entry>
         <oasis:entry colname="col11">10</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Buoyancy</oasis:entry>
         <oasis:entry colname="col2">0.98</oasis:entry>
         <oasis:entry colname="col3">47.8</oasis:entry>
         <oasis:entry colname="col4">1.13</oasis:entry>
         <oasis:entry colname="col5">0.99</oasis:entry>
         <oasis:entry colname="col6">11</oasis:entry>
         <oasis:entry colname="col7">0.91</oasis:entry>
         <oasis:entry colname="col8">25.6</oasis:entry>
         <oasis:entry colname="col9">0.99</oasis:entry>
         <oasis:entry colname="col10">0.99</oasis:entry>
         <oasis:entry colname="col11">10</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Bowen</oasis:entry>
         <oasis:entry colname="col2">0.88</oasis:entry>
         <oasis:entry colname="col3">30.6</oasis:entry>
         <oasis:entry colname="col4">0.98</oasis:entry>
         <oasis:entry colname="col5">0.99</oasis:entry>
         <oasis:entry colname="col6">11</oasis:entry>
         <oasis:entry colname="col7">0.82</oasis:entry>
         <oasis:entry colname="col8">0.6</oasis:entry>
         <oasis:entry colname="col9">0.82</oasis:entry>
         <oasis:entry colname="col10">0.98</oasis:entry>
         <oasis:entry colname="col11">10</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col9">Latent heat flux, forest 32 m </oasis:entry>
         <oasis:entry colname="col10"/>
         <oasis:entry colname="col11"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">No</oasis:entry>
         <oasis:entry colname="col2">0.63</oasis:entry>
         <oasis:entry colname="col3">11.0</oasis:entry>
         <oasis:entry colname="col4">0.69</oasis:entry>
         <oasis:entry colname="col5">0.95</oasis:entry>
         <oasis:entry colname="col6">5</oasis:entry>
         <oasis:entry colname="col7">0.67</oasis:entry>
         <oasis:entry colname="col8">23.8</oasis:entry>
         <oasis:entry colname="col9">0.79</oasis:entry>
         <oasis:entry colname="col10">0.99</oasis:entry>
         <oasis:entry colname="col11">6</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Buoyancy</oasis:entry>
         <oasis:entry colname="col2">0.65</oasis:entry>
         <oasis:entry colname="col3">14.2</oasis:entry>
         <oasis:entry colname="col4">0.74</oasis:entry>
         <oasis:entry colname="col5">0.94</oasis:entry>
         <oasis:entry colname="col6">5</oasis:entry>
         <oasis:entry colname="col7">0.69</oasis:entry>
         <oasis:entry colname="col8">33.2</oasis:entry>
         <oasis:entry colname="col9">0.86</oasis:entry>
         <oasis:entry colname="col10">0.99</oasis:entry>
         <oasis:entry colname="col11">6</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Bowen</oasis:entry>
         <oasis:entry colname="col2">0.76</oasis:entry>
         <oasis:entry colname="col3">44.4</oasis:entry>
         <oasis:entry colname="col4">1.04</oasis:entry>
         <oasis:entry colname="col5">0.91</oasis:entry>
         <oasis:entry colname="col6">5</oasis:entry>
         <oasis:entry colname="col7">0.82</oasis:entry>
         <oasis:entry colname="col8">58.5</oasis:entry>
         <oasis:entry colname="col9">1.12</oasis:entry>
         <oasis:entry colname="col10">0.99</oasis:entry>
         <oasis:entry colname="col11">6</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col9">NEE, forest 32 m </oasis:entry>
         <oasis:entry colname="col10"/>
         <oasis:entry colname="col11"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">No</oasis:entry>
         <oasis:entry colname="col2">0.72</oasis:entry>
         <oasis:entry colname="col3">3.3</oasis:entry>
         <oasis:entry colname="col4">0.55</oasis:entry>
         <oasis:entry colname="col5">0.93</oasis:entry>
         <oasis:entry colname="col6">6</oasis:entry>
         <oasis:entry colname="col7">0.65</oasis:entry>
         <oasis:entry colname="col8"><inline-formula><mml:math id="M132" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>1.1</oasis:entry>
         <oasis:entry colname="col9">0.70</oasis:entry>
         <oasis:entry colname="col10">0.96</oasis:entry>
         <oasis:entry colname="col11">8</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Buoyancy</oasis:entry>
         <oasis:entry colname="col2">0.75</oasis:entry>
         <oasis:entry colname="col3">3.3</oasis:entry>
         <oasis:entry colname="col4">0.58</oasis:entry>
         <oasis:entry colname="col5">0.93</oasis:entry>
         <oasis:entry colname="col6">6</oasis:entry>
         <oasis:entry colname="col7">0.64</oasis:entry>
         <oasis:entry colname="col8"><inline-formula><mml:math id="M133" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>2.4</oasis:entry>
         <oasis:entry colname="col9">0.76</oasis:entry>
         <oasis:entry colname="col10">0.95</oasis:entry>
         <oasis:entry colname="col11">8</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Bowen</oasis:entry>
         <oasis:entry colname="col2">0.88</oasis:entry>
         <oasis:entry colname="col3">2.4</oasis:entry>
         <oasis:entry colname="col4">0.76</oasis:entry>
         <oasis:entry colname="col5">0.95</oasis:entry>
         <oasis:entry colname="col6">6</oasis:entry>
         <oasis:entry colname="col7">0.70</oasis:entry>
         <oasis:entry colname="col8"><inline-formula><mml:math id="M134" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>7.3</oasis:entry>
         <oasis:entry colname="col9">1.06</oasis:entry>
         <oasis:entry colname="col10">0.81</oasis:entry>
         <oasis:entry colname="col11">8</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry namest="col1" nameend="col9">AE, forest 32 m </oasis:entry>
         <oasis:entry colname="col10"/>
         <oasis:entry colname="col11"/>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Uniform<inline-formula><mml:math id="M135" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">b</mml:mi></mml:msup></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col2">1.04</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M136" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.2</oasis:entry>
         <oasis:entry colname="col4">1.04</oasis:entry>
         <oasis:entry colname="col5">1.00</oasis:entry>
         <oasis:entry colname="col6">17</oasis:entry>
         <oasis:entry colname="col7">1.05</oasis:entry>
         <oasis:entry colname="col8"><inline-formula><mml:math id="M137" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>11.5</oasis:entry>
         <oasis:entry colname="col9">1.03</oasis:entry>
         <oasis:entry colname="col10">1.00</oasis:entry>
         <oasis:entry colname="col11">17</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table><table-wrap-foot><p id="d1e3821"><inline-formula><mml:math id="M127" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">a</mml:mi></mml:msup></mml:math></inline-formula> Orthogonal regression  considering a zero intercept.<?xmltex \hack{\\}?><inline-formula><mml:math id="M128" display="inline"><mml:msup><mml:mi/><mml:mi mathvariant="normal">b</mml:mi></mml:msup></mml:math></inline-formula> AE is the same for all three methods because the heat storage term of the canopy and the ground heat flux are uniformly estimated.</p></table-wrap-foot></table-wrap>

      <p id="d1e4459">However, for the clearing with <inline-formula><mml:math id="M138" display="inline"><mml:mrow><mml:mtext>Bo</mml:mtext><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula>, different results have
been found: with the Bowen ratio correction, the<?pagebreak page2953?> sensible heat flux is
significantly underestimated by about 30 % and the latent heat
flux is overestimated by about 12 %. The buoyancy correction
underestimates both fluxes by about 10 %. The measured latent heat
flux is often larger than the modeled latent heat flux. This is
probably a large effect of the plants in the footprint and the soil
water content, which is not proportional to the land cover fraction
used by the footprint model. Taking into account the
30 <inline-formula><mml:math id="M139" display="inline"><mml:mrow><mml:mi mathvariant="normal">W</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">m</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula> higher available energy of the model, which is of
the order of about 10–20 % of the turbulent fluxes (therefore,
the modeled fluxes are higher by this value), the buoyancy correction
is more appropriate for the clearing.</p>
      <p id="d1e4491">The correction of the NEE data seems to be necessary, but the
underestimation by the model is still given. This could be an
overestimation by the measured fluxes due to the increased mechanical
turbulence and consequently also turbulent fluxes caused by the
heterogeneous forest structure, as discussed by
<xref ref-type="bibr" rid="bib1.bibx17" id="normal.74"/>. Furthermore, a related LES study by
<xref ref-type="bibr" rid="bib1.bibx34" id="normal.75"/> shows a maximal flux at a distance from the
roughness step of about 10 times the canopy height that is nearly the
location of the tower. Therefore, the Bowen ratio correction of the
NEE for the forest seems to agree better, while over the clearing the
fluxes are too small to allow useful conclusions to be made.</p>
</sec>
<sec id="Ch1.S3.SS2.SSS3">
  <title>Analysis of the energy balance closure correction</title>
      <?pagebreak page2955?><p id="d1e4506">In this section we used the modeled data, which close the energy
balance by definition as an etalon, for the validation of the
correction methods. Therefore, the modeled Bowen ratio was assumed to
be true and the measured fluxes have been corrected in such a way that
the energy balance was closed and the Bowen ratio agreed with the
modeled Bowen ratio. Finally, the fraction of the residual attributed
to the sensible heat flux has been determined and is shown in
Fig. <xref ref-type="fig" rid="Ch1.F6"/>. Sometimes, when the measured latent heat
flux was significantly larger than the modeled flux, the fraction was
up to 150 %. This analysis was only made for the forest with
a more homogeneous footprint. Figure <xref ref-type="fig" rid="Ch1.F6"/> also
shows, for comparison, the proposed corrections according to the Bowen
ratio <xref ref-type="bibr" rid="bib1.bibx65" id="paren.76"/> and the buoyancy flux
<xref ref-type="bibr" rid="bib1.bibx6" id="paren.77"/>. Clearly, the assumption that convection
is responsible for the energy balance problem and that a large part of
the residual should be added to the sensible heat flux may only be
true for <inline-formula><mml:math id="M140" display="inline"><mml:mrow><mml:mtext>Bo</mml:mtext><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">1.5</mml:mn></mml:mrow></mml:math></inline-formula>. For lower Bowen ratios, the real
correction might lie between the two methods and for <inline-formula><mml:math id="M141" display="inline"><mml:mrow><mml:mtext>Bo</mml:mtext><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> be
more in accordance with the Bowen ratio correction. Unfortunately, the
number of available data points for <inline-formula><mml:math id="M142" display="inline"><mml:mrow><mml:mtext>Bo</mml:mtext><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">1.5</mml:mn></mml:mrow></mml:math></inline-formula> is very low,
so the presented results can only be interpreted as
a tendency. This means that secondary circulations probably
responsible for the unclosed energy balance are not only generated by
convective processes. Further research is necessary, including other
well-parameterized models that close the energy balance very well, as are
data sets for lower Bowen ratios. In all cases with high Bowen ratios,
the attribution of residual energy to latent heat flux is low. Therefore,
due to the assumption of similarity between the water and carbon
dioxide fluxes, the NEE flux was only marginally corrected under these
conditions. In conclusion, for spruce forests with typically high
Bowen ratios, no correction of the NEE is necessary.
<?xmltex \hack{\newpage}?></p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F6" specific-use="star"><caption><p id="d1e4559">Fraction of the residual attributed to the sensible heat flux
for the forest site (GDP 1, 2, and 3), under the assumption that the
model calculated the true Bowen ratio, and according to the
correction methods with the Bowen ratio <xref ref-type="bibr" rid="bib1.bibx65" id="paren.78"/> and the
buoyancy flux <xref ref-type="bibr" rid="bib1.bibx6" id="paren.79"/>.</p></caption>
            <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://bg.copernicus.org/articles/15/2945/2018/bg-15-2945-2018-f06.png"/>

          </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F7" specific-use="star"><caption><p id="d1e4576">Main daily cycle of the <bold>(a)</bold> sensible and
<bold>(b)</bold> latent heat flux as well as <bold>(c)</bold> NEE for the
first golden day period modeled with ACASA for the forest (red line)
and the clearing at 5.5 m (tile approach for the different land use
types of the clearing; blue line) and for a flux weighting of
50 % clearing and 50 % forest (black line).</p></caption>
            <?xmltex \igopts{width=341.433071pt}?><graphic xlink:href="https://bg.copernicus.org/articles/15/2945/2018/bg-15-2945-2018-f07.pdf"/>

          </fig>

</sec>
<sec id="Ch1.S3.SS2.SSS4">
  <title>Tile approach for a mixed forest site</title>
      <p id="d1e4600">The comparison of the modeled and the measured fluxes has shown that
the ACASA model determines the fluxes for high and low vegetation with
high accuracy and within the typical measurement uncertainty
<xref ref-type="bibr" rid="bib1.bibx42 bib1.bibx43" id="paren.80"/> of eddy covariance measurements if
the measured data are corrected for energy balance closure. This
offers the possibility to model fluxes over larger heterogeneous
areas, like a catchment, with a tile approach. Even when the fluxes
above the different land use types are significantly different and are
changing, e.g., with the Bowen ratio, the tile approach achieves
appropriate results. To illustrate these differences,
Fig. <xref ref-type="fig" rid="Ch1.F7"/> shows mean daily cycles for the
Waldstein–Weidenbrunnen forest site and the heterogeneous
Köhlerloh clearing, whereby every surface contributes 50 % to
the additionally shown weighted flux. The magnitudes of the sensible
heat flux are generally higher at the forest than at the
clearing. In contrast, during the day the latent heat flux is higher for
the forest and during night the dewfall is higher for the
clearing. The main differences for both surfaces occur for the
NEE. The magnitude of the NEE for the forest is sometimes more than
twice that from the clearing during the day. During the night, the
differences between the NEE for the forest and the clearing are
smaller. <xref ref-type="bibr" rid="bib1.bibx12" id="normal.81"/> already showed a high variation in the
NEE between the different species considered in the tile approach for
the clearing. This variability is also present for the comparison<?pagebreak page2957?> of
the NEE for the forest and the clearing. These differences are
illustrated because the NEE data measured at the
Waldstein–Weidenbrunnen site are used in many modeling studies within
FLUXNET. For the specification of surface characteristics these studies
often use remote sensing data, in which the forest and the clearing are
contained in the relevant grid. Thus, the satellite-derived LAI and
fractional PAR (photosynthetically active radiation) have to be
interpreted as a mixture of forest and clearing. However, the FLUXNET
station at Waldstein–Weidenbrunnen is characterized only as a forest
measuring station, with <italic>Picea abies</italic> as the main vegetation
type, because the fluxes have been obtained at the main tower (MT;
Fig. <xref ref-type="fig" rid="Ch1.F1"/>b) or at the turbulence tower (TT) since
2007. Consequently, the NEE can hardly be reproduced through
the consideration of the weighted vegetation parameterization.</p>
</sec>
</sec>
</sec>
<sec id="Ch1.S4" sec-type="conclusions">
  <title>Conclusions</title>
      <p id="d1e4624">The ACASA model, which was originally developed for tall vegetation,
can also be used with high accuracy for low vegetation, as was
demonstrated for the clearing, if the plant-specific parameters are
appropriately implemented in the model. Therefore, it is applicable to
consider ACASA in tile approaches for heterogeneous areas for tall and short vegetation or clearings.</p>
      <p id="d1e4627">The footprint-averaged tile approach did not produce significantly
better results than the tile approach for the whole clearing, as was
done by <xref ref-type="bibr" rid="bib1.bibx12" id="text.82"/>. The footprint model is probably not
accurate enough in the location of the effect levels of the footprint,
considering the small-scale heterogeneities of the clearing in
comparison to the size of the footprint area. This issue has already
been shown in a comparison of different footprint models by
<xref ref-type="bibr" rid="bib1.bibx40" id="normal.83"/>. For larger heterogeneities, this approach may be
more appropriate. Furthermore, the clearing area contained randomly
distributed very wet parts, which could not be classified in the
land use characteristics of the tile approaches.</p>
      <p id="d1e4636">The small underestimation by the model of fluxes above the forest is
probably a local overestimation of the fluxes at the turbulence tower
(TT), which is adjacent to an area of the forest where higher fluxes are
possible <xref ref-type="bibr" rid="bib1.bibx17" id="paren.84"/>. Large-eddy simulation studies have
shown that at a distance of 10 times the canopy height from the
forest edge, higher fluxes are possible <xref ref-type="bibr" rid="bib1.bibx34" id="paren.85"/>. Such
a highly local effect is impossible to model in ACASA.</p>
      <?pagebreak page2958?><p id="d1e4645">Assuming that the ACASA model is well parameterized and the available
energy is accurately distributed to the sensible and the latent heat
flux, a good agreement has been found with the energy-balance-corrected measurements. The correction with the buoyancy flux leads to
better results, but this depends on the Bowen ratio; i.e., for
<inline-formula><mml:math id="M143" display="inline"><mml:mrow><mml:mtext>Bo</mml:mtext><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> it is better than for <inline-formula><mml:math id="M144" display="inline"><mml:mrow><mml:mtext>Bo</mml:mtext><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>.</mml:mo></mml:mrow></mml:math></inline-formula> This result
supports earlier findings <xref ref-type="bibr" rid="bib1.bibx33 bib1.bibx3" id="paren.86"/>. The idea
behind the buoyancy correction that buoyancy is the reason for
secondary circulations is only partly true. Possible errors in the
eddy covariance method cannot be inferred from the improved
applicability of the Bowen ratio correction for low Bowen ratios
(<inline-formula><mml:math id="M145" display="inline"><mml:mrow><mml:mtext>Bo</mml:mtext><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula>). However, a recent investigation by <xref ref-type="bibr" rid="bib1.bibx25" id="normal.87"/>
showed a potential phase shift between the vertical wind component and
the scalars, which might bias the determination of turbulent
fluxes. This should be an objective of a further study with a data set
containing more data for <inline-formula><mml:math id="M146" display="inline"><mml:mrow><mml:mtext>Bo</mml:mtext><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula>. The correction of the NEE is
probably useful, but the effect is not very significant for <inline-formula><mml:math id="M147" display="inline"><mml:mrow><mml:mtext>Bo</mml:mtext><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula>; however, it might be more applicable for accumulated fluxes.</p>
</sec>

      
      </body>
    <back><notes notes-type="codedataavailability">

      <p id="d1e4722">An overview of the instrumentation and important
measurements at the Waldstein–Weidenbrunnen site is provided by
<xref ref-type="bibr" rid="bib1.bibx16" id="normal.88"/>. Data are available from Thomas Foken on
request. The ACASA model code is available from Kyaw Tha Paw U on
request.</p>
  </notes><notes notes-type="authorcontribution">

      <p id="d1e4731">The paper is based on the master's degree thesis
of KG, who was advised by AR and TF and supported by WB
(application of the footprint modeling and turbulence data
calculation), EF (plant parameters), and RDP
and KTPU (application of ACASA). The additional analysis in this
paper and the writing was done by KG, who was advised by TF.</p>
  </notes><notes notes-type="competinginterests">

      <p id="d1e4737">The authors declare that they have no conflict of
interest.</p>
  </notes><ack><title>Acknowledgements</title><p id="d1e4743">The first author acknowledges Ina Tegen for providing the
opportunity to finalize this paper at the Leibniz Institute for
Tropospheric Research. We thank the editor and the three anonymous
reviewers for the helpful comments.</p><p id="d1e4745">This research was funded within the DFG projects FO 226/16-1 and ME
2100/4-1 as well the DFG PAK 446 project, mainly through the subprojects ME
2100/5-1 and FO226/21-1, the German Federal Ministry of Education,
Science, Research and Technology (PT BEO 51-0339476 D), and the BaCaTeC
(Bayerisch-Kalifornische Hochschulzentrum) project Modellierung des
Energieaustausches zwischen der Atmosphäre und
Waldökosystemen. Partial support came from a grant from the US
National Science Foundation EF1137306 to the Massachusetts Institute
of Technology, sub-award 5710003122 to the University of California,
Davis. This publication was funded by the German Research Foundation
(DFG) and the University of Bayreuth within the funding program Open
Access Publishing.<?xmltex \hack{\newline}?><?xmltex \hack{\newline}?>
Edited by: Andreas Ibrom<?xmltex \hack{\newline}?>
Reviewed by: three anonymous referees</p></ack><ref-list>
    <title>References</title>

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    <!--<article-title-html>Footprint-weighted tile approach for a spruce forest and a nearby patchy clearing using the ACASA model</article-title-html>
<abstract-html><p>The ACASA (Advanced Canopy–Atmosphere–Soil Algorithm) model, with
a higher-order closure for tall vegetation, has already been
successfully tested and validated for homogeneous spruce
forests. The aim of this paper is to test the model using
a footprint-weighted tile approach for a clearing with
a heterogeneous structure of the underlying surface. The comparison
with flux data shows a good agreement with a footprint-aggregated
tile approach of the model. However, the results of a comparison
with a tile approach on the basis of the mean land use
classification of the clearing is not significantly different. It is
assumed that the footprint model is not accurate enough to separate
small-scale heterogeneities. All measured fluxes are corrected by
forcing the energy balance closure of the test data either by
maintaining the measured Bowen ratio or by the attribution of the
residual depending on the fractions of sensible and latent heat flux
to the buoyancy flux. The comparison with the model, in which the
energy balance is closed, shows that the buoyancy correction for
Bowen ratios  &gt; 1.5 better fits the measured data. For lower Bowen
ratios, the correction probably lies between the two methods, but the
amount of available data was too small to make a conclusion. With an
assumption of similarity between water and carbon dioxide fluxes,
no correction of the net ecosystem exchange is necessary for Bowen
ratios  &gt; 1.5.</p></abstract-html>
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