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<article xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:oasis="http://docs.oasis-open.org/ns/oasis-exchange/table" xml:lang="en" dtd-version="3.0">
  <front>
    <journal-meta><journal-id journal-id-type="publisher">BG</journal-id><journal-title-group>
    <journal-title>Biogeosciences</journal-title>
    <abbrev-journal-title abbrev-type="publisher">BG</abbrev-journal-title><abbrev-journal-title abbrev-type="nlm-ta">Biogeosciences</abbrev-journal-title>
  </journal-title-group><issn pub-type="epub">1726-4189</issn><publisher>
    <publisher-name>Copernicus Publications</publisher-name>
    <publisher-loc>Göttingen, Germany</publisher-loc>
  </publisher></journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.5194/bg-16-4183-2019</article-id><title-group><article-title>Organic-carbon-rich sediments: benthic foraminifera as bio-indicators of depositional environments</article-title><alt-title>Organic-carbon-rich sediments</alt-title>
      </title-group><?xmltex \runningtitle{Organic-carbon-rich sediments}?><?xmltex \runningauthor{E. Lo Giudice Cappelli et al.}?>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1">
          <name><surname>Lo Giudice Cappelli</surname><given-names>Elena</given-names></name>
          <email>elena.logiudice.cappelli@gmail.com</email>
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1 aff2">
          <name><surname>Clarke</surname><given-names>Jessica Louise</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-7145-9367</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Smeaton</surname><given-names>Craig</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-4535-2555</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Davidson</surname><given-names>Keith</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1 aff3">
          <name><surname>Austin</surname><given-names>William Edward Newns</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-6544-3468</ext-link></contrib>
        <aff id="aff1"><label>1</label><institution>School of Geography and Sustainable Development, University of St
Andrews, St Andrews, KY16 9AL, Scotland, UK</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>School of Natural and Environmental Sciences, Newcastle University,
Newcastle, NE1 7RU, UK</institution>
        </aff>
        <aff id="aff3"><label>3</label><institution>Scottish Association for Marine Science, Scottish Marine Institute,
Oban, PA37 1QA, Scotland, UK</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Elena Lo Giudice Cappelli (elena.logiudice.cappelli@gmail.com)</corresp></author-notes><pub-date><day>6</day><month>November</month><year>2019</year></pub-date>
      
      <volume>16</volume>
      <issue>21</issue>
      <fpage>4183</fpage><lpage>4199</lpage>
      <history>
        <date date-type="received"><day>5</day><month>April</month><year>2019</year></date>
           <date date-type="rev-request"><day>20</day><month>May</month><year>2019</year></date>
           <date date-type="rev-recd"><day>18</day><month>September</month><year>2019</year></date>
           <date date-type="accepted"><day>25</day><month>September</month><year>2019</year></date>
      </history>
      <permissions>
        <copyright-statement>Copyright: © 2019 Elena Lo Giudice Cappelli et al.</copyright-statement>
        <copyright-year>2019</copyright-year>
      <license license-type="open-access"><license-p>This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">https://creativecommons.org/licenses/by/4.0/</ext-link></license-p></license></permissions><self-uri xlink:href="https://bg.copernicus.org/articles/16/4183/2019/bg-16-4183-2019.html">This article is available from https://bg.copernicus.org/articles/16/4183/2019/bg-16-4183-2019.html</self-uri><self-uri xlink:href="https://bg.copernicus.org/articles/16/4183/2019/bg-16-4183-2019.pdf">The full text article is available as a PDF file from https://bg.copernicus.org/articles/16/4183/2019/bg-16-4183-2019.pdf</self-uri>
      <abstract><title>Abstract</title>
    <p id="d1e130">Fjords have been described as hotspots for carbon burial,
potentially playing a key role within the carbon cycle as climate regulators
over multiple timescales. Nevertheless, little is known about the long-term
fate of the carbon that may become stored in fjordic sediments. One of the
main reasons for this knowledge gap is that carbon arriving on the seafloor
is prone to post-depositional degradation, posing a great challenge when
trying to discriminate between an actual change in the carbon deposition rate
and post-depositional carbon loss. In this study, we evaluate the use of
modern benthic foraminifera as bio-indicators of organic carbon content in
six voes (fjords) on the west coast of Shetland. Benthic foraminifera are
known to be sensitive to changes in organic carbon content in the sediments,
and changes in their assemblage composition therefore reflect synchronous
variations in the quantity and quality of carbon reaching the seafloor. We
identified four environments based on the relationship between benthic
foraminiferal assemblages and organic carbon content in the sediments: (1) land-locked regions influenced by riverine and/or freshwater inputs of organic
matter, namely the head of fjords with a restricted geomorphology; (2) stressed environments with a heavily stratified water column and sediments
rich in organic matter of low nutritional value; (3) depositional
environments with moderate organic content and mild or episodic current
activity; and (4) marginal to coastal settings with low organic content, such as
fjords with an unrestricted geomorphology. We conclude that foraminifera
potentially provide a tool to disentangle primary organic carbon signals
from post-depositional degradation and loss of organic carbon because of
their environmental sensitivity and high preservation potential in the
sedimentary record.</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <label>1</label><title>Introduction</title>
      <p id="d1e142">Globally, fjords sequester about 18 Mt of organic carbon (OC) annually in
their sediments, partly acting to reduce the remineralisation of OC into the
environment and thus buffering the release of carbon dioxide (<inline-formula><mml:math id="M1" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">CO</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>) to
the atmosphere (e.g. Smith et al., 2015;
Cui et al., 2016). A recent
study by Smeaton et al. (2017) estimated that the sediments
of Scotland's 111 major fjords hold <inline-formula><mml:math id="M2" display="inline"><mml:mrow><mml:mn mathvariant="normal">295</mml:mn><mml:mo>±</mml:mo><mml:mn mathvariant="normal">52</mml:mn></mml:mrow></mml:math></inline-formula> Mt OC. In Shetland, these
fjordic systems are different from their mainland counterparts, notably in
that they are shallower and less glaciated (Edwards and
Sharples, 1986) and peat or peaty soils dominate their catchments
(Soil Survey of Scotland, 1981). The erosion of terrestrial
organic matter (OM) is known to be a major source of OC in fjordic sediments
(Cui et al., 2017), and Scottish peatlands hold 1620 Mt of OC (Chapman et al., 2009). Shetland
peatlands cover over one-third of the archipelago's total area, and their
erosion accounts for a loss of 1 to 4 cm yr<inline-formula><mml:math id="M3" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> from peat surfaces
(Birnie, 1993). Eroding peatlands may therefore hold the
potential to contribute significantly to OC burial and accumulation in
Shetland's voes and to the overall coastal OC store of this region.
Nevertheless, little is known about the long-term fate of the OC that may
accumulate and become stored in these sediments. One of the main reasons for
this knowledge gap is that OC is prone to post-depositional modification and
degradation. It is<?pagebreak page4184?> therefore difficult to discern whether a down-core
decrease in OC content is due to an actual change in carbon deposition over
time or simply to this post-depositional loss
(Hülse et al., 2017; Stolpovsky et
al., 2017).</p>
      <p id="d1e180">Benthic foraminiferal assemblages have long been used as indicators of
environmental change and to reconstruct the intrinsic characteristics of
marine ecosystems. A recent study
(Duffield et al., 2017) explored the
relationship between foraminiferal assemblages and variations in OC content
in the surficial and recent sediments of Norwegian fjords, highlighting
temporal trends in OC fluxes and ecological quality status. In this study,
we evaluate the use of modern benthic foraminifera as bio-indicators of OC
content in six voes (fjords) on the west coast of Shetland whose
sedimentation dynamics are likely influenced by the erosion of OC-rich peat
from the surrounding catchments (Fig. 1). As benthic foraminifera are
sensitive to changes in OC content in the sediments
(Alve et al., 2016, and
references therein), changes in their assemblage composition should reflect
synchronous variations in the amount of OC reaching the seafloor. Given the
high preservation potential of their tests in marine sediments (e.g.
Murray, 2003; Thomas et
al., 1995), foraminifera potentially offer a means to discriminate primary
OC signals from post-depositional OC degradation and may provide a tool to
validate studies and models reconstructing past changes in the carbon cycle
(Hülse et al., 2017; Stolpovsky et
al., 2017). Nevertheless, the relationship between OC and foraminiferal
assemblages is not straightforward and warrants further investigation.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F1"><?xmltex \currentcnt{1}?><label>Figure 1</label><caption><p id="d1e185">Location map of Shetland and the sampling stations.</p></caption>
        <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://bg.copernicus.org/articles/16/4183/2019/bg-16-4183-2019-f01.png"/>

      </fig>

      <p id="d1e195">Early studies developed conceptual models explaining benthic foraminiferal
microhabitat preferences in deep sea settings based on changes in the
organic flux reaching the seafloor and bottom water oxygenation
(Jorissen
et al., 1995; Van Der Zwaan et al., 1999). Researchers have found that in
well-oxygenated bottom waters, food is usually the limiting factor
controlling the distribution of benthic foraminifera, whereas under
eutrophic conditions, bottom water oxygenation may become the dominant
control on the composition of foraminiferal assemblages (Jorissen
et al., 1995; Van Der Zwaan et al., 1999). Typically, food availability is
strongly connected to OC fluxes and the transport of organic matter to the
seafloor. In this context, it becomes crucial to understand not only food
availability in terms of the quantity of OM reaching the seafloor, but also
to understand the quality of this food source. For example, refractory
organic matter (ROM), often derived from reworked terrestrial sources, is
known to be of low nutritional value for benthic foraminifera compared to
the more bio-available form of labile organic matter (LOM) (e.g. Fontanier
et al., 2008; Jorissen et al., 1998). It should also be noted that the OC
accumulation rate and bottom water oxygen concentrations are often related,
with low oxygen concentrations reducing the reworking or remineralisation of OM
and thus favouring its preservation in marine sediments. In certain
environments, this implies that similar OC fluxes could result in different
OC accumulation rates depending on bottom water oxygenation, the latter
defining the composition of benthic foraminiferal assemblages
(Van Der Zwaan et al., 1999).</p>
      <p id="d1e198">To investigate the relationships between sedimentary OC in six west Shetland
voes and the associated changes in benthic foraminiferal assemblages, this
study combines geochemical and micropalaeontological techniques to do the following: (1) fingerprint the source (terrestrial vs. marine) and quality (refractory vs.
labile) of organic matter and the form (organic vs. inorganic) of
sedimentary carbon; (2) establish the benthic foraminiferal distribution in
Shetland's voes from recent surficial sediments; and (3) investigate the use of
benthic foraminifera as bio-indicators of OC content in coastal sediments
and their potential for palaeo-OC reconstruction purposes.</p><?xmltex \hack{\newpage}?>
</sec>
<?pagebreak page4185?><sec id="Ch1.S2">
  <label>2</label><title>Material and methods</title>
<sec id="Ch1.S2.SS1">
  <label>2.1</label><title>Area of study and sampling strategy</title>
      <p id="d1e217">Shetland is a subarctic archipelago covering a total area of 1466 km<inline-formula><mml:math id="M4" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula>,
lying about 170 km north of mainland Scotland, UK (Fig. 1). Several voes
dissect Shetland's coastline, providing an extended route for the transport
of OC-rich material from land to sea (Cui et al., 2016). The current
study focuses on six voes on Shetland's west coast: Clift Sound, Sand Sound,
Olna Firth, Aith Voe, Busta Voe and Vaila Sound (Fig. 1, Table 1). These six
voes are characterised by different geomorphologies, freshwater inputs,
proximity to the open sea and intensity of local currents; together these
characteristics determine the amount of carbon deposited in the sediments.
Clift Sound lies south of Shetland, with the islands of Trondra and East Burra to
the west, and has steep sides and a relatively unrestricted geomorphology (Fig. 1). Two main types of soil are present in the catchment of Clift Sound:
humus–iron podzols cover the islands of East Burra and Trondra, while peaty
soils dominate the eastern coast of Clift Sound (Fig. S1 in the Supplement).
Winds are generally from the southwest and can be channelled, resulting in
intensified currents due to the geometry of the sound and the surrounding
highlands. Tidal energy can also be channelled into more vigorous currents
(Cefas, 2007a).</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T1"><?xmltex \currentcnt{1}?><label>Table 1</label><caption><p id="d1e232">Station data.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="4">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Location</oasis:entry>
         <oasis:entry colname="col2">Sample ID</oasis:entry>
         <oasis:entry colname="col3">Longitude</oasis:entry>
         <oasis:entry colname="col4">Latitude</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">Clift Sound</oasis:entry>
         <oasis:entry colname="col2">MD15-01</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M5" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1.277267</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">60.11943</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Clift Sound</oasis:entry>
         <oasis:entry colname="col2">MD15-02</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M6" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1.284533</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">60.09987</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Clift Sound</oasis:entry>
         <oasis:entry colname="col2">MD15-03</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M7" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1.2975</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">60.07995</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Clift Sound</oasis:entry>
         <oasis:entry colname="col2">MD15-04</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M8" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1.307783</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">60.06635</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Clift Sound</oasis:entry>
         <oasis:entry colname="col2">MD15-05</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M9" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1.315883</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">60.04765</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Sand Sound</oasis:entry>
         <oasis:entry colname="col2">MD15-06</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M10" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1.40295</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">60.24485</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Sand Sound</oasis:entry>
         <oasis:entry colname="col2">MD15-07</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M11" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1.404183</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">60.24477</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Sand Sound</oasis:entry>
         <oasis:entry colname="col2">MD15-08</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M12" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1.379517</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">60.24237</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Sand Sound</oasis:entry>
         <oasis:entry colname="col2">MD15-09</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M13" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1.35835</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">60.24178</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Sand Sound</oasis:entry>
         <oasis:entry colname="col2">MD15-10</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M14" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1.370517</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">60.22822</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Olna Firth</oasis:entry>
         <oasis:entry colname="col2">MD15-11</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M15" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1.295883</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">60.36277</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Olna Firth</oasis:entry>
         <oasis:entry colname="col2">MD15-12</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M16" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1.32315</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">60.36425</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Aith Voe</oasis:entry>
         <oasis:entry colname="col2">MD15-13</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M17" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1.374883</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">60.28945</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Aith Voe</oasis:entry>
         <oasis:entry colname="col2">MD15-14</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M18" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1.373333</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">60.3055</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Busta Voe</oasis:entry>
         <oasis:entry colname="col2">MD15-15</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M19" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1.361217</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">60.39075</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Busta Voe</oasis:entry>
         <oasis:entry colname="col2">MD15-16</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M20" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1.358883</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">60.38063</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Busta Voe</oasis:entry>
         <oasis:entry colname="col2">MD15-17</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M21" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1.370517</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">60.3694</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Vaila Sound</oasis:entry>
         <oasis:entry colname="col2">MD15-18</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M22" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1.564083</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">60.21943</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Vaila Sound</oasis:entry>
         <oasis:entry colname="col2">MD15-19</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M23" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1.5624</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">60.213</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Vaila Sound</oasis:entry>
         <oasis:entry colname="col2">MD15-20</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M24" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1.582167</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">60.21428</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Vaila Sound</oasis:entry>
         <oasis:entry colname="col2">MD15-21</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M25" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1.567467</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">60.20567</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d1e756">Sand Sound is somehow T-shaped, located in the southwest of Shetland and
comprises three areas: the head of the voe, the inner basin and the outer
basin (Fig. 1). The head of the voe, almost perpendicular to the inner and
outer basins, is a sheltered area that receives freshwater from a
significant number of rivers draining the surrounding land. Three main types
of soil characterise this area: peaty gleys, peaty podzols and peaty rankers
(Fig. S1). Here, the voe is very shallow and drying can occur
in its eastern and western periphery (Cefas, 2007b, 2008b). In
contrast, the rest of the voe is much deeper. The inner basin gently slopes
away, reaching more than 20 m at its maximum depth; drying can still occur
where this basin meets the head of the voe  (Cefas, 2007b). The
outer basin has steep sides; it is 42 m deep at its deepest point and
completely open to sea. A shallow sill divides the inner from the outer
basins (Cefas, 2007b).</p>
      <p id="d1e760">Busta Voe, Olna Firth and Aith Voe are part of a major inlet on the southern
coastline of St Magnus Bay on the west coast of Shetland (Fig. 1). Olna
Firth represents the eastern branch of the inlet and is roughly oriented
east–west; it is the furthest away from the open sea (Fig. 1). A large
area of this voe exceeds 30 m of water depth; the northern coastline gradually
slopes into the voe, whereas the south side shows a steeper gradient. Olna
Firth is classified as micro-tidal, and due to the generally low level of
energy in this system, stratification may occur, especially during summertime (Cefas, 2013).</p>
      <p id="d1e763">Aith Voe is the southern component of the inlet, with a north–south
orientation (Fig. 1). Due to the hilly landscape (up to 100 m) surrounding
the voe, Aith Voe is exposed to winds from the north, which can
significantly alter local circulation and prevent stratification of the
water column. Two types of soil surround Aith voe: peaty and organic soils
(Fig. S1); few streams drain these soils, with the largest of
them discharging on the east coast of Aith Voe (Cefas, 2010).</p>
      <p id="d1e766">Busta Voe lies in the northern part of the inlet and is oriented north–south, sheltered and with a maximum water depth of 39 m (Fig. 1). Three main
types of soil surround this area: peaty gleys, peaty podzols and peaty
rankers (Fig. S1); two rivers drain a relatively small
catchment area into Busta Voe. Tidal flow is weak in the voe and wind-generated currents are predominant; stratification of the water column,
especially during warm periods, can occur (Cefas, 2008a).</p>
      <p id="d1e769">Vaila Sound lies on the western coast of Shetland, with the island of Vaila
to the southwest and the isle of Linga in the middle (Fig. 1). Three types
of soil dominate the catchment of this voe: peaty gleys, peaty podzols and
peaty rankers (Fig. S1). Most streams discharge in the northern
part of the sound; hence, locations in this area might become more affected
by terrigenous inputs. Additionally, Linga offers protection from wind and
currents, which could facilitate the localised accumulation of terrigenous
material. Shelter from strong winds is also provided by the island of Vaila
to the south. Here the tidal range is small and the associated energy weak;
however, Vaila Sound is connected to the Atlantic Ocean west and east of the
island of Vaila (Cefas, 2009).</p>
      <?pagebreak page4186?><p id="d1e772">The MV <italic>Moder Dy</italic> 2015 cruise in west Shetland surveyed the six voes in August 2015 (Table 1). Marine surface sediments were sampled using a Duncan and
Associates Van Veen grab with a sampling area of 0.1 m<inline-formula><mml:math id="M26" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula>. A total of 23
surface sediment samples were obtained by scraping the top layer
(<inline-formula><mml:math id="M27" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> cm thick) of each grab with a domestic spoon; samples
were then stored in a cold box in sealed plastic bottles.</p>
      <p id="d1e797">An earlier field survey of Shetland voes carried out in August 2009 measured
bottom water temperature (BWT), salinity (BWS) and oxygen (<inline-formula><mml:math id="M28" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>) at the
same locations as this study (Fig. 2); however, no data were collected in
Vaila Sound. Oceanographic measurements were made using a Sea-Bird SBE 19
plus conductivity–temperature–depth (CTD) profiler with a dissolved oxygen
probe. Bottom water temperature varies between 14.14 and 12.20 <inline-formula><mml:math id="M29" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C,
being on average 12.74 <inline-formula><mml:math id="M30" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C (Fig. 2a). Bottom water salinity
remains almost constant across these voes, ranging between 35 and 35.2 psu
with the exception of MD15-06, where BWS reached a minimum of 34.7 psu
(Fig. 2b). Similarly, bottom waters are mostly well-oxygenated in all the
voes (<inline-formula><mml:math id="M31" display="inline"><mml:mrow><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:math></inline-formula> mg L<inline-formula><mml:math id="M32" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) with the exception of Olna Firth
where lower <inline-formula><mml:math id="M33" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> was observed (Fig. 2c).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F2" specific-use="star"><?xmltex \currentcnt{2}?><label>Figure 2</label><caption><p id="d1e872">CTD profiles from the 2009 survey. <bold>(a)</bold> Temperature profiles and bottom
water temperature (BWT) at each sampling station. <bold>(b)</bold> Salinity profiles and
bottom water salinity (BWS) at each sampling station. <bold>(c)</bold> Dissolved oxygen
profiles and oxygen concentration in bottom waters at each sampling station.
The dashed line at 5 mg L<inline-formula><mml:math id="M34" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula> indicates the possible onset of hypoxic conditions.</p></caption>
          <?xmltex \igopts{width=369.885827pt}?><graphic xlink:href="https://bg.copernicus.org/articles/16/4183/2019/bg-16-4183-2019-f02.png"/>

        </fig>

</sec>
<sec id="Ch1.S2.SS2">
  <label>2.2</label><title>Particle size measurement</title>
      <p id="d1e910">Particle size analyses were performed on a subset of surface sediments
using a Coulter LS230 particle size analyser to quantify the volume (%)
of the various grain sizes in each sample. We identified three categories
based on the International Organisation for Standardisation (ISO) scale:
“clay” includes particles <inline-formula><mml:math id="M35" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M36" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m, “silt” particles between
2 and 63 <inline-formula><mml:math id="M37" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m, and “sand” particles <inline-formula><mml:math id="M38" display="inline"><mml:mo>&gt;</mml:mo></mml:math></inline-formula> 63 <inline-formula><mml:math id="M39" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m (upper limit
of 2000 <inline-formula><mml:math id="M40" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m). Before analysis, sediment samples were digested using 30 % hydrogen peroxide to remove organic matter and 10 % hydrochloric
acid to remove carbonate, following a similar methodology to that outlined
by Austin and Evans (2010). Digestions were carried out to
obtain an insoluble residue useful for comparing sediments having very
different carbonate and organic matter content, which otherwise might skew
the measurements because of in situ processes.</p>
</sec>
<sec id="Ch1.S2.SS3">
  <label>2.3</label><title>Loss on ignition (LOI) analysis</title>
      <p id="d1e971">Loss on ignition measurements were carried out to quantify the percentage of
total organic matter (TOM) and the respective amounts of labile (LOM) and
refractory organic matter (ROM). The initial combustion temperature was set
to 250 <inline-formula><mml:math id="M41" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C, as significant mass loss of LOM has been recorded at
this temperature (Mook and Hoskin, 1982). Sediments
were successively heated to 550 <inline-formula><mml:math id="M42" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C to quantify ROM, as refractory
terrestrial and aquatic OM will likely burn off at this temperature
(Kristensen,
1990). About 1 g of dried sediment was precisely weighted into crucibles of
known weight for each surface sample (<inline-formula><mml:math id="M43" display="inline"><mml:mrow><mml:msub><mml:mi>M</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>). These were ashed in a muffle
furnace at 250 <inline-formula><mml:math id="M44" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C for 4 h, cooled and weighted (<inline-formula><mml:math id="M45" display="inline"><mml:mrow><mml:msub><mml:mi>M</mml:mi><mml:mn mathvariant="normal">250</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>).
Samples were then returned to the furnace at 550 <inline-formula><mml:math id="M46" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C for 4 h,
cooled and reweighted (<inline-formula><mml:math id="M47" display="inline"><mml:mrow><mml:msub><mml:mi>M</mml:mi><mml:mn mathvariant="normal">550</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>). TOM, LOM and ROM were calculated as
follows:

                <disp-formula specific-use="align"><mml:math id="M48" display="block"><mml:mtable displaystyle="true"><mml:mtr><mml:mtd><mml:mstyle displaystyle="true" class="stylechange"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mi mathvariant="normal">LOM</mml:mi><mml:mo>=</mml:mo><mml:mo>[</mml:mo><mml:mo>(</mml:mo><mml:msub><mml:mi>M</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>M</mml:mi><mml:mn mathvariant="normal">250</mml:mn></mml:msub><mml:mo>)</mml:mo><mml:mo>/</mml:mo><mml:msub><mml:mi>M</mml:mi><mml:mi mathvariant="normal">S</mml:mi></mml:msub><mml:mo>]</mml:mo><mml:mo>⋅</mml:mo><mml:mn mathvariant="normal">100</mml:mn></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mstyle displaystyle="true" class="stylechange"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:mi mathvariant="normal">ROM</mml:mi><mml:mo>=</mml:mo><mml:mo>[</mml:mo><mml:mo>(</mml:mo><mml:msub><mml:mi>M</mml:mi><mml:mn mathvariant="normal">250</mml:mn></mml:msub><mml:mo>-</mml:mo><mml:msub><mml:mi>M</mml:mi><mml:mn mathvariant="normal">550</mml:mn></mml:msub><mml:mo>)</mml:mo><mml:mo>/</mml:mo><mml:msub><mml:mi>M</mml:mi><mml:mi mathvariant="normal">S</mml:mi></mml:msub><mml:mo>]</mml:mo><mml:mo>⋅</mml:mo><mml:mn mathvariant="normal">100</mml:mn></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mstyle displaystyle="true" class="stylechange"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:mi mathvariant="normal">TOM</mml:mi><mml:mo>=</mml:mo><mml:mi mathvariant="normal">LOM</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="normal">ROM</mml:mi><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>

            where <inline-formula><mml:math id="M49" display="inline"><mml:mrow><mml:msub><mml:mi>M</mml:mi><mml:mi mathvariant="normal">S</mml:mi></mml:msub></mml:mrow></mml:math></inline-formula> is the sample weight minus the crucible weight. Replicate
samples were measure at stations MD15-01A, MD15-01B, MD15-05A and MD15-05B, which
resulted in a mean relative error of <inline-formula><mml:math id="M50" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.07</mml:mn></mml:mrow></mml:math></inline-formula> % for LOM, <inline-formula><mml:math id="M51" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.06</mml:mn></mml:mrow></mml:math></inline-formula> % for ROM and <inline-formula><mml:math id="M52" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">0.03</mml:mn></mml:mrow></mml:math></inline-formula> % for TOM, pointing to very good data
reproducibility and representation of local conditions.</p>
</sec>
<sec id="Ch1.S2.SS4">
  <label>2.4</label><title>Bulk carbon elemental and stable isotope analyses</title>
      <p id="d1e1202">Surface sediment samples were analysed to determine bulk elemental C and
stable isotope (<inline-formula><mml:math id="M53" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">13</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>C) values. Each sediment sample was freeze-dried and homogenised, and approximately 12 mg of milled sediment was placed
into silver capsules; a further 10 mg was placed into tin capsules.</p>
      <p id="d1e1216">The samples encapsulated in silver underwent an acid fumigation step
(Harris et al., 2001) to remove
inorganic carbon (IC). After drying for 24 h at 40 <inline-formula><mml:math id="M54" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C, both
OC and <inline-formula><mml:math id="M55" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">13</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>C were measured using an elemental analyser coupled
to an isotope ratio mass spectrometer (IRMS) at the NERC Life Science Mass
Spectrometer Facility (Lancaster, UK). The standard deviation of <inline-formula><mml:math id="M56" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">13</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>C triplicate measurements was 0.07 ‰, and <inline-formula><mml:math id="M57" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">13</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>C values are reported in standard delta notation relative to Vienna
Pee Dee Belemnite (VPDB).</p>
      <p id="d1e1261">The samples in tin capsules were analysed for total carbon (TC) using an
Elementar elemental analyser (EA) at the School of Geography and Sustainable
Development, University of St Andrews
(Verardo et al., 1990). The precision of the
analysis is calculated based on repeat measurements of standard reference
material B2178 (medium organic content standard from Elemental
Microanalysis, UK) with C <inline-formula><mml:math id="M58" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0.08 %.</p>
      <p id="d1e1271">These results were combined together to calculate the quantity of IC in each
sample; the percentage of OC was subtracted from the percentage of TC to
obtain the percentage of IC.</p>
</sec>
<sec id="Ch1.S2.SS5">
  <label>2.5</label><title>Binary mixing model</title>
      <?pagebreak page4187?><p id="d1e1283">To discriminate between marine-sourced and terrestrially sourced OC, we used
a two-endmember (binary) mixing model assuming a two-point source of OC,
marine and terrestrial, following Thornton and
McManus (1994). We used <inline-formula><mml:math id="M59" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">13</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>C measurements in the sediment
samples as a tracer of the source of OC in west Shetland voes and calculated
the fraction of terrestrially sourced OC (OC<inline-formula><mml:math id="M60" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">terr</mml:mi></mml:msub></mml:math></inline-formula>) as follows:

                <disp-formula specific-use="align"><mml:math id="M61" display="block"><mml:mtable displaystyle="true"><mml:mtr><mml:mtd><mml:mstyle displaystyle="true" class="stylechange"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle displaystyle="true" class="stylechange"/><mml:msub><mml:mi mathvariant="normal">OC</mml:mi><mml:mi mathvariant="normal">terr</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mo>(</mml:mo><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">13</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mi mathvariant="normal">mar</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">13</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mi mathvariant="normal">terr</mml:mi></mml:msub><mml:mo>)</mml:mo><mml:mo>/</mml:mo><mml:mo>(</mml:mo><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">13</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mi mathvariant="normal">mar</mml:mi></mml:msub><mml:mo>-</mml:mo><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">13</mml:mn></mml:msup><mml:msub><mml:mi mathvariant="normal">C</mml:mi><mml:mi mathvariant="normal">sample</mml:mi></mml:msub><mml:mo>)</mml:mo></mml:mrow></mml:mtd></mml:mtr><mml:mtr><mml:mtd><mml:mstyle displaystyle="true" class="stylechange"/></mml:mtd><mml:mtd><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:msub><mml:mi mathvariant="normal">OC</mml:mi><mml:mi mathvariant="normal">terr</mml:mi></mml:msub><mml:mo>+</mml:mo><mml:msub><mml:mi mathvariant="normal">OC</mml:mi><mml:mi mathvariant="normal">mar</mml:mi></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>,</mml:mo></mml:mrow></mml:mtd></mml:mtr></mml:mtable></mml:math></disp-formula>

            where the endmember value for marine-sourced OC (<inline-formula><mml:math id="M62" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">13</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>C<inline-formula><mml:math id="M63" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">mar</mml:mi></mml:msub></mml:math></inline-formula>)
was taken from Smeaton and Austin (2017)
based on phytoplankton, zooplankton, macroalgae and benthic microalgae
carbon stable isotope values, while the endmember for terrestrially sourced
OC (<inline-formula><mml:math id="M64" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">13</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>C<inline-formula><mml:math id="M65" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">terr</mml:mi></mml:msub></mml:math></inline-formula>) was based upon the work of
Thornton et al. (2015), who studied the distribution of carbon stable isotope in Scotland's
topsoil; OC<inline-formula><mml:math id="M66" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">mar</mml:mi></mml:msub></mml:math></inline-formula> indicates the fraction of marine-derived OC. We assumed
no isotope discrimination between the source and the surface sediment
samples.</p>
</sec>
<sec id="Ch1.S2.SS6">
  <label>2.6</label><title>Benthic foraminiferal counts and statistics</title>
      <p id="d1e1462">Aliquots of surface sediments were stained with rose bengal to allow for the
identification of living foraminifera, as detailed in
Schönfeld et al. (2012).
However, it should be noted that foraminiferal counts are “total” (live <inline-formula><mml:math id="M67" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> dead) because the main objective of this study is to provide a tool for the
interpretation of fossil foraminiferal assemblages and their relationship
with changes in OM and OC content in sediments over time (e.g.
Conradsen, 1993). Our priority is to understand how
benthic foraminifera respond to prevailing (long-term) environmental
conditions rather than to seasonal variability. Additionally, scraping the
top layer (<inline-formula><mml:math id="M68" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> cm thick) of each grab with a domestic spoon
may lead to a potential underestimation of living fauna if mixing of the top
layer occurred during sampling. In this scenario, the number of living
foraminifera at the sediment surface will be “diluted” due to the presence
of dead and/or fossil specimens from deeper sediments. Having said this, a recent
study by Rillo et al. (2019) reported that historical
sediment samples collected in a way that could have caused disturbance of
the sediment surface (sounding and dredge) are still<?pagebreak page4188?> representative of
surface conditions, and their foraminiferal assemblages can be used to
reconstruct environmental changes reliably. At two sites, MD15-01 and
MD15-05, replicate samples were taken (MD15-01A and MD15-01B; MD15-05A and MD15-05B,
respectively) to check measurement reproducibility and seafloor
heterogeneity.</p>
      <p id="d1e1482">As part of an unpublished work, rose-bengal-stained surface sediments
were wet-sieved over a 63 <inline-formula><mml:math id="M69" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m mesh; the residues were oven-dried at <inline-formula><mml:math id="M70" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">60</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M71" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C, then weighed and dry-sieved into 63–150 <inline-formula><mml:math id="M72" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m and
<inline-formula><mml:math id="M73" display="inline"><mml:mrow><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">150</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M74" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m size fractions. As part of an associated work
aiming to understand the influence of different size fractions on the
composition of benthic foraminiferal assemblages (Lo Giudice Cappelli and Austin, 2019), both size fractions were analysed independently, and
the results demonstrated that a more holistic picture of environmental
change is obtained when benthic foraminiferal assemblages of both size
fractions are compiled together. This improves the representation of the
entire assemblage and results in more statistically robust environmental
reconstructions. Similar findings were also reached by
Weinkauf and Milker (2018, and references therein).
Depending on sample volume, each sample was divided into a number of splits
using a standard dry splitter and, when possible, at least 300 specimens
were dry-picked to ensure statistical significance when discussing benthic
foraminiferal assemblage diversity and composition
(Schönfeld et al., 2012).
Species were identified following Austin (1991) and counted
using a tally sheet; notes on tests preservations were made when signs of
etching were observed.</p>
      <p id="d1e1539">Relative benthic foraminiferal abundances were calculated for each sample.
It should be noted that we grouped under the name <italic>E. excavatum</italic> both forma <italic>selseyense</italic> and forma
<italic>clavata</italic> despite them being recognised as genetically different species (Darling et al., 2016). It was
not possible to consistently identify and discriminate between these two
species; hence, we used a common identifier.</p>
      <p id="d1e1551">The Palaeontological Statistics software package PAST (version 3.16;
Hammer et al., 2001) was used to
analyse relationships between benthic foraminiferal assemblages through
cluster analysis, canonical component analysis (CCA) and non-metric
multidimensional scaling (MDS) based on the Bray–Curtis similarity index and
relative abundance data. Cluster analysis showed good reproducibility of
benthic foraminiferal assemblages (Fig. 4b) with the two pairs of replicate
stations exhibiting assemblage reproducibility of 90 % (MD15-01A and MD15-01B)
and 94 % (MD15-05A and MD15-05B).</p>
</sec>
</sec>
<sec id="Ch1.S3">
  <label>3</label><title>Results</title>
<sec id="Ch1.S3.SS1">
  <label>3.1</label><title>Sediment analyses</title>
<sec id="Ch1.S3.SS1.SSS1">
  <label>3.1.1</label><title>Particle size distribution in west Shetland voes</title>
      <p id="d1e1577">A highly variable pattern is evident in the particle size distribution of
the sediments of west Shetland voes (Fig. 3a). Clift Sound, Olna Firth,
stations MD15-08 and MD15-10 in Sand Sound, and station MD15-13 in Aith Voe have
silt-dominated sediments (<inline-formula><mml:math id="M75" display="inline"><mml:mrow><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">65</mml:mn></mml:mrow></mml:math></inline-formula> %; Fig. 3a). Conversely,
stations MD15-06, MD15-07 and MD15-09 in Sand Sound, MD15-14 in Aith Voe, MD15-15
and MD15-17 in Busta Voe, and MD15-20 and MD15-21 in Vaila Sound are
dominated by sandy sediments (<inline-formula><mml:math id="M76" display="inline"><mml:mrow><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">50</mml:mn></mml:mrow></mml:math></inline-formula> %) (Fig. 3a).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F3" specific-use="star"><?xmltex \currentcnt{3}?><label>Figure 3</label><caption><p id="d1e1602">Sediment physical properties. <bold>(a)</bold> Particle size analysis. <bold>(b)</bold> Fraction of terrestrially sourced OC (OC<inline-formula><mml:math id="M77" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">terr</mml:mi></mml:msub></mml:math></inline-formula>) and marine-sourced OC
(OC<inline-formula><mml:math id="M78" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">mar</mml:mi></mml:msub></mml:math></inline-formula>) at each site. <bold>(c)</bold> Refractory and labile organic matter content
at each site and carbon stable isotope. <bold>(d)</bold> Inorganic and organic carbon
percentage at each site and carbon stable isotope.</p></caption>
            <?xmltex \igopts{width=369.885827pt}?><graphic xlink:href="https://bg.copernicus.org/articles/16/4183/2019/bg-16-4183-2019-f03.png"/>

          </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F4" specific-use="star"><?xmltex \currentcnt{4}?><label>Figure 4</label><caption><p id="d1e1644">Statistical analyses. <bold>(a)</bold> Cluster analysis of sediment and seawater
physical properties. <bold>(b)</bold> Cluster analysis of benthic foraminiferal
assemblages. <bold>(c)</bold> Canonical component analysis of the combined datasets
(sediment and seawater <inline-formula><mml:math id="M79" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> benthic foraminifera relative abundance).</p></caption>
            <?xmltex \igopts{width=369.885827pt}?><graphic xlink:href="https://bg.copernicus.org/articles/16/4183/2019/bg-16-4183-2019-f04.png"/>

          </fig>

</sec>
<sec id="Ch1.S3.SS1.SSS2">
  <label>3.1.2</label><title>Organic matter content in west Shetland voes</title>
      <p id="d1e1677">Total OM is generally higher in proximity to land than at sites more exposed
to the open sea (Fig. 3c). Site MD15-20 (Vaila Sound) has the lowest
percentage of total OM (3.05 %), ROM (2.24 %) and LOM (0.81 %),
whereas site MD15-08 (Sand Sound) has the highest percentage of total OM
(20.85 %) and ROM (12.37 %). LOM is the highest (8.81 %) at site
MD15-11 (Olna Firth) (Table 3; Fig. 3c).</p>
</sec>
<sec id="Ch1.S3.SS1.SSS3">
  <label>3.1.3</label><title>Carbon content and source in west Shetland bulk sediments</title>
      <p id="d1e1688">The percentage of total carbon (TC) in west Shetland voes varies between
4.31 % and 14.32 % (Fig. 3d), with the highest percentage found at station
MD15-05 (Clift Sound) and the lowest at station MD15-09 (Sand Sound).
Organic carbon (OC) content ranges between 2.0 % and 8.51 %, peaking at station
MD15-11 (Olna Firth) and reaching a minimum at site MD15-17 (Busta Voe)
(Fig. 3d; Table 3). The percentage of inorganic carbon (IC) varies between
0.35 % and 7.51 % and is the highest at station MD15-03 (Clift Sound) and
the lowest at station MD15-14 (Aith Voe) (Fig. 3d). We excluded from the
dataset site MD15-15, as this sample contains coal, which is believed to
have been shed accidentally from a commercial vessel. In general, there is a
tendency for high OC and low IC at the head of the voes, and the reverse
occurs where the voes connect to the sea (Fig. 3d).</p>
      <p id="d1e1691">In terms of a carbon source, OC<inline-formula><mml:math id="M80" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">terr</mml:mi></mml:msub></mml:math></inline-formula> is generally higher at sites close to
land than in proximity to the open sea (Fig. 3b). It reaches a peak of
72 % at station MD1-06 in Sand Sound and a minimum of 21 % at station
MD15-03 (Fig. 3b).</p>
</sec>
<sec id="Ch1.S3.SS1.SSS4">
  <label>3.1.4</label><?xmltex \opttitle{Carbon stable isotopes ($\delta^{{13}}$C)}?><title>Carbon stable isotopes (<inline-formula><mml:math id="M81" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">13</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>C)</title>
      <?pagebreak page4189?><p id="d1e1723">Bulk sediment <inline-formula><mml:math id="M82" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">13</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>C varies between <inline-formula><mml:math id="M83" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">25.41</mml:mn></mml:mrow></mml:math></inline-formula> ‰ and <inline-formula><mml:math id="M84" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">21.26</mml:mn></mml:mrow></mml:math></inline-formula> ‰ with an average value of <inline-formula><mml:math id="M85" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">22.67</mml:mn></mml:mrow></mml:math></inline-formula> ‰
(Table 3). The lowest value (<inline-formula><mml:math id="M86" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">25.41</mml:mn></mml:mrow></mml:math></inline-formula> ‰) is recorded at
site MD15-06 (Sand Sound) and the highest (<inline-formula><mml:math id="M87" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">21.26</mml:mn></mml:mrow></mml:math></inline-formula> ‰) at
station MD15-03 (Clift Sound); high <inline-formula><mml:math id="M88" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">13</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>C values characterise
marine-dominated locations within each voe (Fig. 3c and d).</p>
</sec>
</sec>
<sec id="Ch1.S3.SS2">
  <label>3.2</label><title>Benthic foraminiferal assemblages in west Shetland voes</title>
      <p id="d1e1808">We observed a total of 64 species of benthic foraminifera at the 21 stations
analysed in this study, including the two replicates samples (Fig. S2). Nine of the observed species are agglutinated: <italic>Ammoscalaria runiana</italic>, <italic>E. scaber</italic>, <italic>Connemarella rudis</italic>,
<italic>Haplophragmoides</italic> sp., <italic>Reophax fusiformis</italic>, <italic>Reophax scotii</italic>, <italic>Spiroplectinella wrightii</italic>, <italic>Textularia earlandii</italic> and <italic>Trochammina</italic> sp. Of these, only <italic>E. scaber </italic>and <italic>Trochammina</italic> sp. were observed at all 21 stations.
However, the <italic>E. scaber</italic> relative abundance varies from 0.4 % in Vaila Sound (MD15-20)
to 43.0 % in Sand Sound (MD15-10) (Fig. 5), whereas the <italic>Trochammina</italic> sp. relative
abundance reaches a maximum of 2.3 % in Clift Sound. Other common
agglutinated species are <italic>Haplophragmoides</italic> sp. and <italic>S. wrightii</italic>, with a relative abundance ranging from 0.1 % (Vaila Sound) to 2.9 % (Busta Voe) and 0.1 % (Olna Firth) to 3.9 % (Clift Sound), respectively. The distribution of the remaining
agglutinated species is patchy, and their relative abundance varies around
the average value of 1 %.</p>

      <?xmltex \floatpos{p}?><fig id="Ch1.F5" specific-use="star"><?xmltex \currentcnt{5}?><label>Figure 5</label><caption><p id="d1e1860">Non-metric MDS ordination plot of benthic foraminifera assemblages
from each site based on relative abundance data.</p></caption>
          <?xmltex \igopts{width=369.885827pt}?><graphic xlink:href="https://bg.copernicus.org/articles/16/4183/2019/bg-16-4183-2019-f05.png"/>

        </fig>

      <p id="d1e1869">A total of 6 of the 64 observed species belong to the porcelaneous group Miliolina:
<italic>Cornuspira</italic> sp. <italic>Miliolinella subrotunda</italic>, <italic>Quinqueloculina bicornis</italic>, <italic>Quinqueloculina seminula</italic>, <italic>Quinqueloculina</italic> sp. and <italic>Spiroloculina rotunda</italic>. Of these, the most abundant species is <italic>Q. seminula</italic>, which is present
in low numbers in five of the six studied fjords; it does not occur in Aith
Voe. The general distribution of Miliolina is patchy, and their relative
abundance varies around the average value of 0.5 %, with the highest
value of 2.4 % observed at the mouth of Clift Sound (MD15-05B).</p>
      <p id="d1e1895">The remaining 49 species are hyaline foraminifera of which 9 species have
relative abundances of <inline-formula><mml:math id="M89" display="inline"><mml:mrow><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">10</mml:mn></mml:mrow></mml:math></inline-formula> % for at least one of the 21
stations studied: <italic>Ammonia</italic> spp., <italic>Bulimina marginata</italic>, <italic>Buliminella elegantissima</italic>, <italic>Cibicides</italic> spp., <italic>Elphidium</italic> <italic>gerthi</italic>, <italic>Elphidium margaritaceum</italic>, <italic>Elphidium excavatum</italic>, <italic>Rosalina</italic> spp. and <italic>Stainforthia fusiformis</italic> (Table 2).
Additionally, of all the hyaline species, 20 are rare, having relative
abundances <inline-formula><mml:math id="M90" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> %, while 18 species are frequent, having a relative
abundance between 1 % and 5 %, and only 2 species are common, having relative
abundances ranging between 5 % and 10 % (Fig. S2).</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T2" specific-use="star"><?xmltex \currentcnt{2}?><label>Table 2</label><caption><p id="d1e1953">Relative abundance of the 10 dominant taxa.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="13">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:colspec colnum="6" colname="col6" align="right"/>
     <oasis:colspec colnum="7" colname="col7" align="right"/>
     <oasis:colspec colnum="8" colname="col8" align="right"/>
     <oasis:colspec colnum="9" colname="col9" align="right"/>
     <oasis:colspec colnum="10" colname="col10" align="right"/>
     <oasis:colspec colnum="11" colname="col11" align="right"/>
     <oasis:colspec colnum="12" colname="col12" align="right"/>
     <oasis:colspec colnum="13" colname="col13" align="right"/>
     <oasis:thead>
       <oasis:row>

         <oasis:entry colname="col1">Location</oasis:entry>

         <oasis:entry colname="col2">Sample ID</oasis:entry>

         <?xmltex \rotentry?><oasis:entry rowsep="1" colname="col3" morerows="5"><italic>Ammonia</italic> spp.</oasis:entry>

         <?xmltex \rotentry?><oasis:entry rowsep="1" colname="col4" morerows="5"><italic>B. marginata</italic></oasis:entry>

         <?xmltex \rotentry?><oasis:entry rowsep="1" colname="col5" morerows="5"><italic>B. elegantissima</italic></oasis:entry>

         <?xmltex \rotentry?><oasis:entry rowsep="1" colname="col6" morerows="5"><italic>Cibicidoides</italic> spp.</oasis:entry>

         <?xmltex \rotentry?><oasis:entry rowsep="1" colname="col7" morerows="5"><italic>E. scaber</italic></oasis:entry>

         <?xmltex \rotentry?><oasis:entry rowsep="1" colname="col8" morerows="5"><italic>E. gerthi</italic></oasis:entry>

         <?xmltex \rotentry?><oasis:entry rowsep="1" colname="col9" morerows="5"><italic>E. margaritaceum</italic></oasis:entry>

         <?xmltex \rotentry?><oasis:entry rowsep="1" colname="col10" morerows="5"><italic>E. excavatum</italic></oasis:entry>

         <?xmltex \rotentry?><oasis:entry rowsep="1" colname="col11" morerows="5"><italic>Rosalina</italic> spp.</oasis:entry>

         <?xmltex \rotentry?><oasis:entry rowsep="1" colname="col12" morerows="5"><italic>S. fusiformis</italic></oasis:entry>

         <oasis:entry colname="col13">Total %</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col1"/>

         <oasis:entry colname="col2"/>

         <oasis:entry colname="col13"/>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col1"/>

         <oasis:entry colname="col2"/>

         <oasis:entry colname="col13"/>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col1"/>

         <oasis:entry colname="col2"/>

         <oasis:entry colname="col13"/>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col1"/>

         <oasis:entry colname="col2"/>

         <oasis:entry colname="col13"/>

       </oasis:row>
       <oasis:row rowsep="1">

         <oasis:entry colname="col1"/>

         <oasis:entry colname="col2"/>

         <oasis:entry colname="col13"/>

       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>

         <oasis:entry colname="col1">Clift Sound</oasis:entry>

         <oasis:entry colname="col2">MD15-01A</oasis:entry>

         <oasis:entry colname="col3">0.2</oasis:entry>

         <oasis:entry colname="col4">0.5</oasis:entry>

         <oasis:entry colname="col5">2.1</oasis:entry>

         <oasis:entry colname="col6">14.5</oasis:entry>

         <oasis:entry colname="col7">22.0</oasis:entry>

         <oasis:entry colname="col8">10.7</oasis:entry>

         <oasis:entry colname="col9">20.1</oasis:entry>

         <oasis:entry colname="col10">7.8</oasis:entry>

         <oasis:entry colname="col11">3.8</oasis:entry>

         <oasis:entry colname="col12">3.0</oasis:entry>

         <oasis:entry colname="col13">84.6</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col1">Clift Sound</oasis:entry>

         <oasis:entry colname="col2">MD15-01B</oasis:entry>

         <oasis:entry colname="col3">0.2</oasis:entry>

         <oasis:entry colname="col4">0.6</oasis:entry>

         <oasis:entry colname="col5">2.1</oasis:entry>

         <oasis:entry colname="col6">15.0</oasis:entry>

         <oasis:entry colname="col7">19.9</oasis:entry>

         <oasis:entry colname="col8">10.7</oasis:entry>

         <oasis:entry colname="col9">24.3</oasis:entry>

         <oasis:entry colname="col10">2.1</oasis:entry>

         <oasis:entry colname="col11">3.2</oasis:entry>

         <oasis:entry colname="col12">4.4</oasis:entry>

         <oasis:entry colname="col13">82.5</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col1">Clift Sound</oasis:entry>

         <oasis:entry colname="col2">MD15-02</oasis:entry>

         <oasis:entry colname="col3"/>

         <oasis:entry colname="col4">0.7</oasis:entry>

         <oasis:entry colname="col5">0.3</oasis:entry>

         <oasis:entry colname="col6">47.6</oasis:entry>

         <oasis:entry colname="col7">10.6</oasis:entry>

         <oasis:entry colname="col8">5.4</oasis:entry>

         <oasis:entry colname="col9">3.1</oasis:entry>

         <oasis:entry colname="col10">1.9</oasis:entry>

         <oasis:entry colname="col11">6.6</oasis:entry>

         <oasis:entry colname="col12">3.8</oasis:entry>

         <oasis:entry colname="col13">80.3</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col1">Clift Sound</oasis:entry>

         <oasis:entry colname="col2">MD15-03</oasis:entry>

         <oasis:entry colname="col3">0.2</oasis:entry>

         <oasis:entry colname="col4">1.2</oasis:entry>

         <oasis:entry colname="col5">0.7</oasis:entry>

         <oasis:entry colname="col6">53.7</oasis:entry>

         <oasis:entry colname="col7">3.3</oasis:entry>

         <oasis:entry colname="col8">10.5</oasis:entry>

         <oasis:entry colname="col9">0.8</oasis:entry>

         <oasis:entry colname="col10">1.2</oasis:entry>

         <oasis:entry colname="col11">5.4</oasis:entry>

         <oasis:entry colname="col12">4.6</oasis:entry>

         <oasis:entry colname="col13">81.5</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col1">Clift Sound</oasis:entry>

         <oasis:entry colname="col2">MD15-04</oasis:entry>

         <oasis:entry colname="col3">0.3</oasis:entry>

         <oasis:entry colname="col4">0.9</oasis:entry>

         <oasis:entry colname="col5">0.3</oasis:entry>

         <oasis:entry colname="col6">48.9</oasis:entry>

         <oasis:entry colname="col7">5.2</oasis:entry>

         <oasis:entry colname="col8">13.9</oasis:entry>

         <oasis:entry colname="col9">0.2</oasis:entry>

         <oasis:entry colname="col10"/>

         <oasis:entry colname="col11">4.7</oasis:entry>

         <oasis:entry colname="col12">2.9</oasis:entry>

         <oasis:entry colname="col13">77.3</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col1">Clift Sound</oasis:entry>

         <oasis:entry colname="col2">MD15-05A</oasis:entry>

         <oasis:entry colname="col3"/>

         <oasis:entry colname="col4">0.3</oasis:entry>

         <oasis:entry colname="col5"/>

         <oasis:entry colname="col6">57.6</oasis:entry>

         <oasis:entry colname="col7">2.1</oasis:entry>

         <oasis:entry colname="col8">0.4</oasis:entry>

         <oasis:entry colname="col9">0.1</oasis:entry>

         <oasis:entry colname="col10"/>

         <oasis:entry colname="col11">9.7</oasis:entry>

         <oasis:entry colname="col12">0.7</oasis:entry>

         <oasis:entry colname="col13">71.0</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col1">Clift Sound</oasis:entry>

         <oasis:entry colname="col2">MD15-05B</oasis:entry>

         <oasis:entry colname="col3"/>

         <oasis:entry colname="col4">0.6</oasis:entry>

         <oasis:entry colname="col5"/>

         <oasis:entry colname="col6">56.7</oasis:entry>

         <oasis:entry colname="col7">2.1</oasis:entry>

         <oasis:entry colname="col8">0.2</oasis:entry>

         <oasis:entry colname="col9">0.0</oasis:entry>

         <oasis:entry colname="col10">0.5</oasis:entry>

         <oasis:entry colname="col11">10.4</oasis:entry>

         <oasis:entry colname="col12">1.5</oasis:entry>

         <oasis:entry colname="col13">72.0</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col1">Sand Sound</oasis:entry>

         <oasis:entry colname="col2">MD15-06</oasis:entry>

         <oasis:entry colname="col3">4.8</oasis:entry>

         <oasis:entry colname="col4">0.5</oasis:entry>

         <oasis:entry colname="col5">4.6</oasis:entry>

         <oasis:entry colname="col6">2.0</oasis:entry>

         <oasis:entry colname="col7">25.5</oasis:entry>

         <oasis:entry colname="col8">15.6</oasis:entry>

         <oasis:entry colname="col9">6.1</oasis:entry>

         <oasis:entry colname="col10">15.3</oasis:entry>

         <oasis:entry colname="col11"/>

         <oasis:entry colname="col12">1.3</oasis:entry>

         <oasis:entry colname="col13">75.7</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col1">Sand Sound</oasis:entry>

         <oasis:entry colname="col2">MD15-07</oasis:entry>

         <oasis:entry colname="col3">6.5</oasis:entry>

         <oasis:entry colname="col4">0.8</oasis:entry>

         <oasis:entry colname="col5">4.8</oasis:entry>

         <oasis:entry colname="col6">5.5</oasis:entry>

         <oasis:entry colname="col7">27.7</oasis:entry>

         <oasis:entry colname="col8">11.7</oasis:entry>

         <oasis:entry colname="col9">7.6</oasis:entry>

         <oasis:entry colname="col10">21.5</oasis:entry>

         <oasis:entry colname="col11">0.7</oasis:entry>

         <oasis:entry colname="col12"/>

         <oasis:entry colname="col13">86.7</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col1">Sand Sound</oasis:entry>

         <oasis:entry colname="col2">MD15-08</oasis:entry>

         <oasis:entry colname="col3">3.0</oasis:entry>

         <oasis:entry colname="col4">1.7</oasis:entry>

         <oasis:entry colname="col5">11.4</oasis:entry>

         <oasis:entry colname="col6">2.0</oasis:entry>

         <oasis:entry colname="col7">29.7</oasis:entry>

         <oasis:entry colname="col8">7.5</oasis:entry>

         <oasis:entry colname="col9">1.4</oasis:entry>

         <oasis:entry colname="col10">22.4</oasis:entry>

         <oasis:entry colname="col11">0.2</oasis:entry>

         <oasis:entry colname="col12">6.3</oasis:entry>

         <oasis:entry colname="col13">85.6</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col1">Sand Sound</oasis:entry>

         <oasis:entry colname="col2">MD15-09</oasis:entry>

         <oasis:entry colname="col3">5.4</oasis:entry>

         <oasis:entry colname="col4">0.9</oasis:entry>

         <oasis:entry colname="col5">8.8</oasis:entry>

         <oasis:entry colname="col6">1.9</oasis:entry>

         <oasis:entry colname="col7">19.7</oasis:entry>

         <oasis:entry colname="col8">9.8</oasis:entry>

         <oasis:entry colname="col9">10.1</oasis:entry>

         <oasis:entry colname="col10">25.6</oasis:entry>

         <oasis:entry colname="col11">0.2</oasis:entry>

         <oasis:entry colname="col12">1.6</oasis:entry>

         <oasis:entry colname="col13">83.9</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col1">Sand Sound</oasis:entry>

         <oasis:entry colname="col2">MD15-10</oasis:entry>

         <oasis:entry colname="col3">0.9</oasis:entry>

         <oasis:entry colname="col4">3.8</oasis:entry>

         <oasis:entry colname="col5">1.9</oasis:entry>

         <oasis:entry colname="col6">8.3</oasis:entry>

         <oasis:entry colname="col7">43.0</oasis:entry>

         <oasis:entry colname="col8">4.7</oasis:entry>

         <oasis:entry colname="col9">1.3</oasis:entry>

         <oasis:entry colname="col10">5.2</oasis:entry>

         <oasis:entry colname="col11">1.4</oasis:entry>

         <oasis:entry colname="col12">11.3</oasis:entry>

         <oasis:entry colname="col13">81.8</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col1">Olna Firth</oasis:entry>

         <oasis:entry colname="col2">MD15-11</oasis:entry>

         <oasis:entry colname="col3"/>

         <oasis:entry colname="col4">14.8</oasis:entry>

         <oasis:entry colname="col5">0.8</oasis:entry>

         <oasis:entry colname="col6">10.9</oasis:entry>

         <oasis:entry colname="col7">31.9</oasis:entry>

         <oasis:entry colname="col8">4.4</oasis:entry>

         <oasis:entry colname="col9">1.8</oasis:entry>

         <oasis:entry colname="col10">0.8</oasis:entry>

         <oasis:entry colname="col11">0.5</oasis:entry>

         <oasis:entry colname="col12">23.1</oasis:entry>

         <oasis:entry colname="col13">88.8</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col1">Olna Firth</oasis:entry>

         <oasis:entry colname="col2">MD15-12</oasis:entry>

         <oasis:entry colname="col3">8.5</oasis:entry>

         <oasis:entry colname="col4">8.6</oasis:entry>

         <oasis:entry colname="col5">0.7</oasis:entry>

         <oasis:entry colname="col6">13.7</oasis:entry>

         <oasis:entry colname="col7">22.9</oasis:entry>

         <oasis:entry colname="col8">2.2</oasis:entry>

         <oasis:entry colname="col9">0.9</oasis:entry>

         <oasis:entry colname="col10">2.4</oasis:entry>

         <oasis:entry colname="col11">0.3</oasis:entry>

         <oasis:entry colname="col12">26.0</oasis:entry>

         <oasis:entry colname="col13">86.2</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col1">Aith Voe</oasis:entry>

         <oasis:entry colname="col2">MD15-13</oasis:entry>

         <oasis:entry colname="col3">3.0</oasis:entry>

         <oasis:entry colname="col4">5.6</oasis:entry>

         <oasis:entry colname="col5">12.6</oasis:entry>

         <oasis:entry colname="col6">14.2</oasis:entry>

         <oasis:entry colname="col7">11.7</oasis:entry>

         <oasis:entry colname="col8">9.3</oasis:entry>

         <oasis:entry colname="col9">4.0</oasis:entry>

         <oasis:entry colname="col10">10.0</oasis:entry>

         <oasis:entry colname="col11">0.3</oasis:entry>

         <oasis:entry colname="col12">7.3</oasis:entry>

         <oasis:entry colname="col13">78.1</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col1">Aith Voe</oasis:entry>

         <oasis:entry colname="col2">MD15-14</oasis:entry>

         <oasis:entry colname="col3">12.6</oasis:entry>

         <oasis:entry colname="col4">4.1</oasis:entry>

         <oasis:entry colname="col5">4.6</oasis:entry>

         <oasis:entry colname="col6">26.1</oasis:entry>

         <oasis:entry colname="col7">10.0</oasis:entry>

         <oasis:entry colname="col8">8.2</oasis:entry>

         <oasis:entry colname="col9">0.9</oasis:entry>

         <oasis:entry colname="col10">4.3</oasis:entry>

         <oasis:entry colname="col11">1.8</oasis:entry>

         <oasis:entry colname="col12">8.2</oasis:entry>

         <oasis:entry colname="col13">80.8</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col1">Busta Voe</oasis:entry>

         <oasis:entry colname="col2">MD15-15</oasis:entry>

         <oasis:entry colname="col3">1.0</oasis:entry>

         <oasis:entry colname="col4">2.8</oasis:entry>

         <oasis:entry colname="col5">2.0</oasis:entry>

         <oasis:entry colname="col6">30.1</oasis:entry>

         <oasis:entry colname="col7">12.9</oasis:entry>

         <oasis:entry colname="col8">7.0</oasis:entry>

         <oasis:entry colname="col9">5.1</oasis:entry>

         <oasis:entry colname="col10">5.6</oasis:entry>

         <oasis:entry colname="col11">0.8</oasis:entry>

         <oasis:entry colname="col12">8.2</oasis:entry>

         <oasis:entry colname="col13">75.5</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col1">Busta Voe</oasis:entry>

         <oasis:entry colname="col2">MD15-16</oasis:entry>

         <oasis:entry colname="col3">5.7</oasis:entry>

         <oasis:entry colname="col4">8.5</oasis:entry>

         <oasis:entry colname="col5">0.9</oasis:entry>

         <oasis:entry colname="col6">7.6</oasis:entry>

         <oasis:entry colname="col7">26.4</oasis:entry>

         <oasis:entry colname="col8">5.0</oasis:entry>

         <oasis:entry colname="col9">1.2</oasis:entry>

         <oasis:entry colname="col10">5.1</oasis:entry>

         <oasis:entry colname="col11">0.2</oasis:entry>

         <oasis:entry colname="col12">23.1</oasis:entry>

         <oasis:entry colname="col13">83.7</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col1">Busta Voe</oasis:entry>

         <oasis:entry colname="col2">MD15-17</oasis:entry>

         <oasis:entry colname="col3">2.2</oasis:entry>

         <oasis:entry colname="col4">1.2</oasis:entry>

         <oasis:entry colname="col5">0.1</oasis:entry>

         <oasis:entry colname="col6">70.1</oasis:entry>

         <oasis:entry colname="col7">2.8</oasis:entry>

         <oasis:entry colname="col8">1.4</oasis:entry>

         <oasis:entry colname="col9">0.8</oasis:entry>

         <oasis:entry colname="col10">1.5</oasis:entry>

         <oasis:entry colname="col11">1.1</oasis:entry>

         <oasis:entry colname="col12">4.8</oasis:entry>

         <oasis:entry colname="col13">86.1</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col1">Vaila Sound</oasis:entry>

         <oasis:entry colname="col2">MD15-18</oasis:entry>

         <oasis:entry colname="col3">6.1</oasis:entry>

         <oasis:entry colname="col4">0.9</oasis:entry>

         <oasis:entry colname="col5">11.5</oasis:entry>

         <oasis:entry colname="col6">24.4</oasis:entry>

         <oasis:entry colname="col7">9.5</oasis:entry>

         <oasis:entry colname="col8">7.6</oasis:entry>

         <oasis:entry colname="col9">9.0</oasis:entry>

         <oasis:entry colname="col10">9.2</oasis:entry>

         <oasis:entry colname="col11">2.3</oasis:entry>

         <oasis:entry colname="col12">4.0</oasis:entry>

         <oasis:entry colname="col13">84.5</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col1">Vaila Sound</oasis:entry>

         <oasis:entry colname="col2">MD15-19</oasis:entry>

         <oasis:entry colname="col3">10.2</oasis:entry>

         <oasis:entry colname="col4">2.1</oasis:entry>

         <oasis:entry colname="col5">1.8</oasis:entry>

         <oasis:entry colname="col6">29.6</oasis:entry>

         <oasis:entry colname="col7">8.8</oasis:entry>

         <oasis:entry colname="col8">8.3</oasis:entry>

         <oasis:entry colname="col9">3.4</oasis:entry>

         <oasis:entry colname="col10">9.2</oasis:entry>

         <oasis:entry colname="col11">4.5</oasis:entry>

         <oasis:entry colname="col12">4.3</oasis:entry>

         <oasis:entry colname="col13">82.3</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col1">Vaila Sound</oasis:entry>

         <oasis:entry colname="col2">MD15-20</oasis:entry>

         <oasis:entry colname="col3"/>

         <oasis:entry colname="col4">0.4</oasis:entry>

         <oasis:entry colname="col5">0.1</oasis:entry>

         <oasis:entry colname="col6">68.7</oasis:entry>

         <oasis:entry colname="col7">0.4</oasis:entry>

         <oasis:entry colname="col8">1.2</oasis:entry>

         <oasis:entry colname="col9">0.9</oasis:entry>

         <oasis:entry colname="col10">1.2</oasis:entry>

         <oasis:entry colname="col11">14.7</oasis:entry>

         <oasis:entry colname="col12">0.5</oasis:entry>

         <oasis:entry colname="col13">88.2</oasis:entry>

       </oasis:row>
       <oasis:row>

         <oasis:entry colname="col1">Vaila Sound</oasis:entry>

         <oasis:entry colname="col2">MD15-21</oasis:entry>

         <oasis:entry colname="col3">0.3</oasis:entry>

         <oasis:entry colname="col4">1.4</oasis:entry>

         <oasis:entry colname="col5">0.3</oasis:entry>

         <oasis:entry colname="col6">56.8</oasis:entry>

         <oasis:entry colname="col7">1.9</oasis:entry>

         <oasis:entry colname="col8">1.9</oasis:entry>

         <oasis:entry colname="col9">1.0</oasis:entry>

         <oasis:entry colname="col10">2.9</oasis:entry>

         <oasis:entry colname="col11">11.3</oasis:entry>

         <oasis:entry colname="col12">1.4</oasis:entry>

         <oasis:entry colname="col13">78.9</oasis:entry>

       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d1e3120">Overall, 10 taxa of benthic foraminifera were observed in each of the
six voes and had relative abundances of more than 10 % for at least one of
the 21 stations studied (Table 2): <italic>Ammonia</italic> spp., <italic>Bulimina marginata</italic>, <italic>Buliminella elegantissima</italic>, <italic>Cibicides</italic> spp., <italic>Eggerelloides scaber</italic>, <italic>Elphidium</italic> <italic>gerthi</italic>, <italic>Elphidium margaritaceum</italic>, <italic>Elphidium excavatum</italic>, <italic>Rosalina</italic> spp. and
<italic>Stainforthia fusiformis</italic>. These 10 taxa were categorised as dominant and imaged with a scanning
electron<?pagebreak page4190?> microscope (SEM) at the Scottish Oceans Institute, University of St
Andrews (Fig. 5). Altogether, these 10 dominant taxa account for more than
70 % of the total assemblage at each station (Table 2). In general, the
most abundant taxa observed in west Shetland's six voes is the hyaline
<italic>Cibicides</italic> spp., followed by the agglutinated <italic>E. scaber</italic>
(Table 2 and Fig. 5).</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T3" specific-use="star"><?xmltex \currentcnt{3}?><label>Table 3</label><caption><p id="d1e3167">Sediment physical properties.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="9">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="left"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="right"/>
     <oasis:colspec colnum="6" colname="col6" align="right"/>
     <oasis:colspec colnum="7" colname="col7" align="right"/>
     <oasis:colspec colnum="8" colname="col8" align="right"/>
     <oasis:colspec colnum="9" colname="col9" align="right"/>
     <oasis:thead>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1">Location</oasis:entry>
         <oasis:entry colname="col2">Sample ID</oasis:entry>
         <oasis:entry colname="col3">Water depth (m)</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M91" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">13</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>C</oasis:entry>
         <oasis:entry colname="col5">%IC</oasis:entry>
         <oasis:entry colname="col6">%OC</oasis:entry>
         <oasis:entry colname="col7">%LOM</oasis:entry>
         <oasis:entry colname="col8">%ROM</oasis:entry>
         <oasis:entry colname="col9">%OC<inline-formula><mml:math id="M92" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">terr</mml:mi></mml:msub></mml:math></inline-formula></oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">Clift Sound</oasis:entry>
         <oasis:entry colname="col2">MD15-01A</oasis:entry>
         <oasis:entry colname="col3">13</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M93" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">23.16</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">3.55</oasis:entry>
         <oasis:entry colname="col6">5.44</oasis:entry>
         <oasis:entry colname="col7">4.35</oasis:entry>
         <oasis:entry colname="col8">6.99</oasis:entry>
         <oasis:entry colname="col9">45</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Clift Sound</oasis:entry>
         <oasis:entry colname="col2">MD15-01B</oasis:entry>
         <oasis:entry colname="col3">13</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M94" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">23.16</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">3.55</oasis:entry>
         <oasis:entry colname="col6">5.44</oasis:entry>
         <oasis:entry colname="col7">3.94</oasis:entry>
         <oasis:entry colname="col8">7.29</oasis:entry>
         <oasis:entry colname="col9">45</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Clift Sound</oasis:entry>
         <oasis:entry colname="col2">MD15-02</oasis:entry>
         <oasis:entry colname="col3">15</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M95" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">21.92</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">7.07</oasis:entry>
         <oasis:entry colname="col6">2.80</oasis:entry>
         <oasis:entry colname="col7">1.59</oasis:entry>
         <oasis:entry colname="col8">2.95</oasis:entry>
         <oasis:entry colname="col9">30</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Clift Sound</oasis:entry>
         <oasis:entry colname="col2">MD15-03</oasis:entry>
         <oasis:entry colname="col3">23</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M96" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">21.26</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">7.51</oasis:entry>
         <oasis:entry colname="col6">3.48</oasis:entry>
         <oasis:entry colname="col7">1.60</oasis:entry>
         <oasis:entry colname="col8">3.38</oasis:entry>
         <oasis:entry colname="col9">21</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Clift Sound</oasis:entry>
         <oasis:entry colname="col2">MD15-04</oasis:entry>
         <oasis:entry colname="col3">21</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M97" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">21.51</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">4.72</oasis:entry>
         <oasis:entry colname="col6">3.58</oasis:entry>
         <oasis:entry colname="col7">1.78</oasis:entry>
         <oasis:entry colname="col8">3.79</oasis:entry>
         <oasis:entry colname="col9">25</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Clift Sound</oasis:entry>
         <oasis:entry colname="col2">MD15-05A</oasis:entry>
         <oasis:entry colname="col3">20</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M98" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">21.35</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">7.12</oasis:entry>
         <oasis:entry colname="col6">7.20</oasis:entry>
         <oasis:entry colname="col7">1.32</oasis:entry>
         <oasis:entry colname="col8">4.47</oasis:entry>
         <oasis:entry colname="col9">23</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Clift Sound</oasis:entry>
         <oasis:entry colname="col2">MD15-05B</oasis:entry>
         <oasis:entry colname="col3">20</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M99" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">21.35</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">7.12</oasis:entry>
         <oasis:entry colname="col6">7.20</oasis:entry>
         <oasis:entry colname="col7">1.40</oasis:entry>
         <oasis:entry colname="col8">4.09</oasis:entry>
         <oasis:entry colname="col9">23</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Sand Sound</oasis:entry>
         <oasis:entry colname="col2">MD15-06</oasis:entry>
         <oasis:entry colname="col3">6</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M100" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">25.41</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">2.41</oasis:entry>
         <oasis:entry colname="col6">4.33</oasis:entry>
         <oasis:entry colname="col7">5.32</oasis:entry>
         <oasis:entry colname="col8">8.50</oasis:entry>
         <oasis:entry colname="col9">72</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Sand Sound</oasis:entry>
         <oasis:entry colname="col2">MD15-07</oasis:entry>
         <oasis:entry colname="col3">6</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M101" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">24.07</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">0.53</oasis:entry>
         <oasis:entry colname="col6">4.51</oasis:entry>
         <oasis:entry colname="col7">2.63</oasis:entry>
         <oasis:entry colname="col8">4.26</oasis:entry>
         <oasis:entry colname="col9">56</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Sand Sound</oasis:entry>
         <oasis:entry colname="col2">MD15-08</oasis:entry>
         <oasis:entry colname="col3">11</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M102" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">23.84</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">1.67</oasis:entry>
         <oasis:entry colname="col6">8.28</oasis:entry>
         <oasis:entry colname="col7">8.48</oasis:entry>
         <oasis:entry colname="col8">12.37</oasis:entry>
         <oasis:entry colname="col9">53</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Sand Sound</oasis:entry>
         <oasis:entry colname="col2">MD15-09</oasis:entry>
         <oasis:entry colname="col3">6</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M103" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">23.64</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">0.53</oasis:entry>
         <oasis:entry colname="col6">3.78</oasis:entry>
         <oasis:entry colname="col7">3.07</oasis:entry>
         <oasis:entry colname="col8">4.24</oasis:entry>
         <oasis:entry colname="col9">50</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Sand Sound</oasis:entry>
         <oasis:entry colname="col2">MD15-10</oasis:entry>
         <oasis:entry colname="col3">21</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M104" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">22.87</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">5.57</oasis:entry>
         <oasis:entry colname="col6">4.80</oasis:entry>
         <oasis:entry colname="col7">4.92</oasis:entry>
         <oasis:entry colname="col8">6.68</oasis:entry>
         <oasis:entry colname="col9">41</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Olna Firth</oasis:entry>
         <oasis:entry colname="col2">MD15-11</oasis:entry>
         <oasis:entry colname="col3">31</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M105" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">22.36</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">3.02</oasis:entry>
         <oasis:entry colname="col6">8.51</oasis:entry>
         <oasis:entry colname="col7">8.81</oasis:entry>
         <oasis:entry colname="col8">10.89</oasis:entry>
         <oasis:entry colname="col9">35</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Olna Firth</oasis:entry>
         <oasis:entry colname="col2">MD15-12</oasis:entry>
         <oasis:entry colname="col3">35</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M106" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">22.65</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">2.15</oasis:entry>
         <oasis:entry colname="col6">7.54</oasis:entry>
         <oasis:entry colname="col7">8.07</oasis:entry>
         <oasis:entry colname="col8">11.83</oasis:entry>
         <oasis:entry colname="col9">38</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Aith Voe</oasis:entry>
         <oasis:entry colname="col2">MD15-13</oasis:entry>
         <oasis:entry colname="col3">12</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M107" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">23.55</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">4.70</oasis:entry>
         <oasis:entry colname="col6">5.44</oasis:entry>
         <oasis:entry colname="col7">5.54</oasis:entry>
         <oasis:entry colname="col8">7.07</oasis:entry>
         <oasis:entry colname="col9">49</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Aith Voe</oasis:entry>
         <oasis:entry colname="col2">MD15-14</oasis:entry>
         <oasis:entry colname="col3">36</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M108" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">23.38</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">0.35</oasis:entry>
         <oasis:entry colname="col6">4.48</oasis:entry>
         <oasis:entry colname="col7">2.06</oasis:entry>
         <oasis:entry colname="col8">3.92</oasis:entry>
         <oasis:entry colname="col9">47</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Busta Voe</oasis:entry>
         <oasis:entry colname="col2">MD15-15</oasis:entry>
         <oasis:entry colname="col3">18</oasis:entry>
         <oasis:entry colname="col4">–</oasis:entry>
         <oasis:entry colname="col5">–</oasis:entry>
         <oasis:entry colname="col6">–</oasis:entry>
         <oasis:entry colname="col7">2.99</oasis:entry>
         <oasis:entry colname="col8">8.27</oasis:entry>
         <oasis:entry colname="col9">–</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Busta Voe</oasis:entry>
         <oasis:entry colname="col2">MD15-16</oasis:entry>
         <oasis:entry colname="col3">26</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M109" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">23.06</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">7.40</oasis:entry>
         <oasis:entry colname="col6">3.27</oasis:entry>
         <oasis:entry colname="col7">5.48</oasis:entry>
         <oasis:entry colname="col8">9.19</oasis:entry>
         <oasis:entry colname="col9">43</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Busta Voe</oasis:entry>
         <oasis:entry colname="col2">MD15-17</oasis:entry>
         <oasis:entry colname="col3">24</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M110" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">22.59</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">5.47</oasis:entry>
         <oasis:entry colname="col6">2.06</oasis:entry>
         <oasis:entry colname="col7">2.54</oasis:entry>
         <oasis:entry colname="col8">3.93</oasis:entry>
         <oasis:entry colname="col9">38</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Vaila Sound</oasis:entry>
         <oasis:entry colname="col2">MD15-18</oasis:entry>
         <oasis:entry colname="col3">14</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M111" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">21.82</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">3.70</oasis:entry>
         <oasis:entry colname="col6">4.79</oasis:entry>
         <oasis:entry colname="col7">3.03</oasis:entry>
         <oasis:entry colname="col8">6.00</oasis:entry>
         <oasis:entry colname="col9">28</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Vaila Sound</oasis:entry>
         <oasis:entry colname="col2">MD15-19</oasis:entry>
         <oasis:entry colname="col3">21</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M112" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">21.54</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">3.91</oasis:entry>
         <oasis:entry colname="col6">3.51</oasis:entry>
         <oasis:entry colname="col7">2.86</oasis:entry>
         <oasis:entry colname="col8">6.38</oasis:entry>
         <oasis:entry colname="col9">25</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Vaila Sound</oasis:entry>
         <oasis:entry colname="col2">MD15-20</oasis:entry>
         <oasis:entry colname="col3">19</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M113" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">21.6</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">4.07</oasis:entry>
         <oasis:entry colname="col6">4.07</oasis:entry>
         <oasis:entry colname="col7">0.81</oasis:entry>
         <oasis:entry colname="col8">2.24</oasis:entry>
         <oasis:entry colname="col9">26</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Vaila Sound</oasis:entry>
         <oasis:entry colname="col2">MD15-21</oasis:entry>
         <oasis:entry colname="col3">21</oasis:entry>
         <oasis:entry colname="col4"><inline-formula><mml:math id="M114" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">21.75</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col5">5.52</oasis:entry>
         <oasis:entry colname="col6">2.89</oasis:entry>
         <oasis:entry colname="col7">1.16</oasis:entry>
         <oasis:entry colname="col8">3.03</oasis:entry>
         <oasis:entry colname="col9">27</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

<sec id="Ch1.S3.SS2.SSS1">
  <label>3.2.1</label><title>Statistical analyses of benthic foraminifera data and environmental parameters</title>
      <p id="d1e4149">We used a cluster analysis of environmental parameters (BWT, BWS, <inline-formula><mml:math id="M115" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>,
% Clay, OC, IC, ROM, LOM, <inline-formula><mml:math id="M116" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">13</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>C and WD) based on Euclidean
distance and of benthic foraminifera relative abundance based on the
Bray–Curtis index to illustrate similarities between locations (Fig. 4a and
b). We performed CCA on the combined dataset (benthic foraminifera <inline-formula><mml:math id="M117" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula> environmental parameters) to examine the response of benthic foraminiferal
assemblages to environmental gradients (Fig. 4c). Additionally, we run
non-metric MDS based on the Bray–Curtis similarity index and foraminifera
relative abundance data to analyse similarities between the populations
of the 21 studied stations, independently from environmental forcing (Fig. 5). Note that temperature, salinity and oxygen measurements are from 2009
and may not fully represent the conditions in 2015 when the sediment samples
were collected.</p>
      <?pagebreak page4192?><p id="d1e4181">Based on both CCA and non-metric MDS, we defined the same four groups with
75 % confidence; in the CCA plot, axis 1 explains 57 % of the total
variability and axis 2 explains 26 % based on the 10 environmental parameters
(Figs. 4c and 5). Group 1 includes assemblages dominated by the genus
<italic>Elphidium</italic> and by <italic>E. scaber</italic>; the head of Clift Sound falls into this cluster (MD15-06 to MD15-09).
Group 2 contains assemblages dominated by <italic>E. scaber</italic> with <italic>S. fusiformis</italic> and <italic>B. marginata</italic> as associated species;
the inner basin of Sand Sound (MD15-10), Olna Firth (MD15-11 and MD15-12) and
MD15-16 in Busta Voe are part of this cluster. Group 3 consists of
assemblages characterised by relatively high diversity and no obvious
dominant species; MD15-01A and MD15-01B (head of Clift Sound), MD15-13 and MD15-14
(Aith Voe), MD15-15 (Busta Voe), and MD15-18 and MD15-19 (head of Vaila Sound)
belong to this group. Group 4 comprises assemblages dominated by the genus
<italic>Cibicides</italic> with <italic>Rosalina</italic> as associated taxa and includes stations MD15-02 to MD15-05 in Clift
Sound and stations MD15-20 and MD15-21 in Vaila Sound (Figs. 4c and 5). Station
MD15-17 in Busta Voe falls just outside the 75 % confidence interval
defining Group 4; however, cluster analysis (Fig. 4b) shows <inline-formula><mml:math id="M118" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">82</mml:mn></mml:mrow></mml:math></inline-formula> % similarity between the assemblage of this site and station MD15-20
and more than the 70 % similarity with the rest of the locations belonging
to Group 4. Therefore, for the purposes of our discussion, we include
station MD15-17 in Group 4.</p>
</sec>
</sec>
</sec>
<sec id="Ch1.S4">
  <label>4</label><title>Discussion</title>
<sec id="Ch1.S4.SS1">
  <label>4.1</label><title>Particle size distribution in west Shetland voes</title>
      <p id="d1e4233">The particle size data from the voes of Shetland exhibit a large range with
the silt and sand fractions but little variation in the proportion of clay
(Fig. 3a). These samples suggest a significant size sorting, which is
consistent with the tidal and estuarine dynamics of these voes. In Vaila
Sound, intensified bottom currents and winnowing of finer sediments owing
to the influx of Atlantic Ocean waters (Cefas, 2009) appear to
control local grain size distribution (Fig. 3a). Here, stations exposed to
the open sea and intensified bottom currents are characterised by coarser
sediments (MD15-20 and MD15-21), whereas more sheltered and calm locations
(MD15-18 and MD15-19) are characterised by finer sediments (Fig. 3a). In
contrast, sediments in Clift Sound are silt-dominated (Fig. 3a) despite the
unrestricted geomorphology (Fig. 1) and vigorous bottom currents
(Cefas, 2007a). It appears that a mechanism other than
winnowing of finer sediments by intensified bottom currents drives particle
size distribution here. In Clift Sound, the overall low percentage of OM,
together with the relatively high IC content and <inline-formula><mml:math id="M119" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">13</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>C values,
points to a reduction in terrigenous input as the main driver of particle
size distribution (Fig. 3). Conversely, in Sand Sound, an increased
terrigenous input appears to be responsible for the coarser sediments found
at stations MD15-06, MD15-07 and MD15-09 (Fig. 3). The head of the voe is a
sheltered area that receives freshwater from a significant number of rivers
draining the surrounding land (Cefas, 2007b, 2008b), resulting
in an overall high percentage of OM and OC, low <inline-formula><mml:math id="M120" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">13</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>C values
(Fig. 3c and d), and coarser sediments (Fig. 3a). In contrast, station
MD15-08 at the head of Sand Sound is characterised by finer sediments (Fig. 3a) despite the high terrigenous supply at this location (Fig. 3c and d).
It is possible that, due to the restricted geomorphology of Sand Sound (Fig. 1), weak currents are unable to transport the coarse material to station
MD15-08, the deepest station at the head of the voe (11 m vs. 6 m). In the Sand
Sound inner basin (MD15-10), silty sediments dominate (Fig. 3a). Here, a
combination of reduced terrigenous input and/or weaker currents could be
driving particle size distribution.
Nørgaard-Pedersen et
al. (2006) found similar<?pagebreak page4193?> drivers of particle size distribution in Loch
Etive, a sea loch in mainland western Scotland. Vigorous bottom currents
and/or enhanced terrigenous supply would result in locally coarse sediments,
whereas weaker currents and/or limited terrigenous supply would result in
finer sediments. Due to the duality of drivers determining particle size
distribution in west Shetland voes (bottom current intensity vs.
terrigenous supply), it is challenging to consistently group locations based
on granulometry data (Fig. 3a) or identify a relationship between grain size
distribution and OM and OC content in the sediments (Fig. S3).</p>
</sec>
<sec id="Ch1.S4.SS2">
  <label>4.2</label><title>Spatial distribution, quantity, quality, and source of organic matter and carbon in west Shetland voes</title>
      <p id="d1e4266">A clear pattern is evident with regard to the quantity, quality and source
of organic matter and carbon measured in the six west Shetland voes (Fig. 3). Typically, carbon is present in the sediments as IC and OC, and the
distributions of these two forms of carbon tend to mirror one another, with
low IC and high OC percentages towards land, while the reverse occurs close
to the open sea (Fig. 3d). Organic matter follows the same pattern of OC
distribution regardless of its quality (refractory vs. labile); however, ROM
content in the sediments is always higher than LOM (Fig. 3c) owing to its
resilience to degradation.</p>
      <p id="d1e4269">About the source of OM and OC, low <inline-formula><mml:math id="M121" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">13</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>C and high OC<inline-formula><mml:math id="M122" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">terr</mml:mi></mml:msub></mml:math></inline-formula>
values characterise the head of the voes where high ROM and OC are
accumulated, indicating that the source of this material is terrestrial
(Fig. 3). Terrestrial OM is more stable and resistant to decay than marine
OM (Batten, 1996) and it is enriched in <inline-formula><mml:math id="M123" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">12</mml:mn></mml:msup></mml:math></inline-formula>C from soils,
resulting in lower <inline-formula><mml:math id="M124" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">13</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>C values than marine OM derived from
algae (e.g.
Balasse et al., 2005; Ficken et al., 1998; Marconi et al., 2011; Schiener et
al., 2014; Schmidt and Gleixner, 2005). Sand Sound is dominated by organic-rich and terrestrially sourced material as it receives freshwater and
terrestrial OM from the numerous streams draining the surrounding land (Fig. 3). In contrast, Clift and Vaila Sound are characterised by marine-sourced
material and high IC content in their sediments (Fig. 3) as the inflow of
Atlantic Ocean waters improves the voes' potential for IC storage
(Burrows et al., 2017; Smeaton et
al., 2016, 2017). Olna Firth has the highest LOM percentage as this
relatively deep and micro-tidal basin (Cefas, 2013) is prone to
water mass stratification, which can lower bottom water oxygenation and slow
down the reworking or remineralisation of OM, favouring the preservation of the
more labile material (Fig. 3).</p>
      <p id="d1e4312">A slight deviation from this overall trend was recorded at station MD15-05.
We speculate that the unusually high TC content at station MD15-05 at the
mouth of Clift Sound (Fig. 3d) could relate to the MV <italic>Braer</italic> oil spill of
1993. It appears that after the spill, due to the adverse weather, the oil
became deposited in the sediment of Burra Haaf, just west of Clift Sound
(Fisheries Research Services). Despite the fact that oil levels in the
contaminated sediments have been<?pagebreak page4194?> decreasing steadily over the intervening
years, it is plausible that the OC measurements in this study detected
remnants of this event. Nevertheless, the benthic foraminiferal assemblage
of this location is dominated by <italic>Cibicides</italic> spp. (see Sect. 4.3.4 for more details), which
does not reflect the oil spill or the high OC content, leaving an open
question regarding what drives OC deposition and accumulation at the mouth
of Clift Sound.</p>
</sec>
<sec id="Ch1.S4.SS3">
  <label>4.3</label><title>Modern benthic foraminiferal distribution in Shetland</title>
<sec id="Ch1.S4.SS3.SSS1">
  <label>4.3.1</label><?xmltex \opttitle{Group 1 -- \textit{Elphidium} spp. and \textit{E. scaber}}?><title>Group 1 – <italic>Elphidium</italic> spp. and <italic>E. scaber</italic></title>
      <p id="d1e4342">The genus <italic>Elphidium</italic> becomes the dominant taxa (relative abundance <inline-formula><mml:math id="M125" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">38</mml:mn></mml:mrow></mml:math></inline-formula> %) at the head of Sand Sound (Fig. 5), a very shallow (max depth 11 m)
and organic-rich basin (OC 5.2 %, ROM 7.3 % and LOM 4.9 %; Fig. 4c).
Specifically, <italic>E. excavatum</italic> is the most abundant <italic>Elphidium</italic> (<inline-formula><mml:math id="M126" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">21</mml:mn></mml:mrow></mml:math></inline-formula> %; Fig. 5), as it
can live close to freshwater outflows in low-energy environments and
tolerates high OC and OM concentrations (Fig. 4c) (Alve
and Murray, 1999; Jennings, 2004; Korsun et al., 2014; Mendes et al., 2012).
This is consistent with streams draining into the head of Sand Sound
transporting terrestrial and organic-rich material into the voe (Figs. 3 and
4c). Additionally, the high relative abundance of <italic>E. scaber</italic> (26 %) at the same
locations (Fig. 5) purports a low-energy environment, possible water mass
stratification and high ROM (Fig. 4c) (Evans
et al., 2002; Fontanier et al., 2002; Murray, 1992; Nørgaard-Pedersen et
al., 2006). Thus, assemblages dominated by <italic>Elphidium</italic> spp. and <italic>E. scaber</italic> are likely to be found
in land-locked regions influenced by riverine and/or freshwater inputs like the
head of fjords with a restricted geomorphology.</p>
</sec>
<sec id="Ch1.S4.SS3.SSS2">
  <label>4.3.2</label><?xmltex \opttitle{Group 2 -- \textit{E. scaber}, \textit{B. marginata} and \textit{S.~fusiformis}}?><title>Group 2 – <italic>E. scaber</italic>, <italic>B. marginata</italic> and <italic>S. fusiformis</italic></title>
      <p id="d1e4401"><italic>Eggerelloides scaber</italic>, <italic>B. marginata</italic> and <italic>S. fusiformis</italic> are species typical of organic-rich sediments, stratified waters and
possibly low oxygen concentrations (Fig. 4c), often suggesting stressed
environments (Alve,
1994, 2003; Evans et al., 2002; Fontanier et al., 2002; Murray, 1992;
Nørgaard-Pedersen et al., 2006). <italic>Bulimina marginata</italic> (<inline-formula><mml:math id="M127" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">9</mml:mn></mml:mrow></mml:math></inline-formula> %) seems to thrive
in regions with high ROM (9.6 %) due to its ability to use OM of low
nutritional value as food (Klitgaard-Kristensen and Buhl-Mortensen,
1999) (Figs. 4c and 5). <italic>Stainforthia fusiformis</italic> (<inline-formula><mml:math id="M128" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">21</mml:mn></mml:mrow></mml:math></inline-formula> %) is a known opportunistic
species which follows high OM gradients at stratification fronts
(Alve, 2003; Alve and Murray, 1997; Scott et al., 2003). In general, high organics
in the sediments can result in low oxygen concentrations at the seafloor
(Fig. 4c) due to eutrophication and increased respiration
(Bianchi et al., 2016). Additionally, the
production of humic acids as a by-product of organic matter biodegradation
may lower the pH (Bauer and Bianchi, 2012),
making the environment overall more hostile for foraminifera to calcify,
which could result in the dominance of agglutinated species like <italic>E. scaber</italic>
(<inline-formula><mml:math id="M129" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">31</mml:mn></mml:mrow></mml:math></inline-formula> %) (Fig. 5). Etching of <italic>Ammonia</italic> spp. shells (Fig. S2) in Olna Firth supports the local acidification of bottom waters, which
is substantiated by the low IC content (2.6 %) of stations MD15-11 and MD15-12
(Fig. 3). Therefore, assemblages characterised by <italic>E. scaber</italic>, <italic>B. marginata</italic> and <italic>S. fusiformis</italic> reflect a stressed
environment with a heavily stratified water column, possibly low oxygen
levels and organic-rich sediment, especially in ROM of low nutritional
value. Despite the fact that seawater properties (<inline-formula><mml:math id="M130" display="inline"><mml:mi>T</mml:mi></mml:math></inline-formula>, <inline-formula><mml:math id="M131" display="inline"><mml:mi>S</mml:mi></mml:math></inline-formula> and <inline-formula><mml:math id="M132" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>) were measured in 2009,
they seem to be representative of seawater characteristics in 2015 when the
sediment samples were collected, as the two sets of measurements (seawater
and sediments) appear to be in agreement, reflecting long-term
environmental dynamics.</p>
</sec>
<sec id="Ch1.S4.SS3.SSS3">
  <label>4.3.3</label><title>Group 3 – no obvious dominant taxa</title>
      <p id="d1e4498">The assemblage of Group 3 is characterised by a high relative abundance of
taxa with affinities for OC (4.9 %) and OM (6.3 %) like <italic>Elphidium</italic> (8 %), <italic>E. scaber</italic> (13 %)
and <italic>B. elegantissima</italic> (5 %) (e.g. Mendes et al., 2012; Alve and
Murray, 1999), as well as high-energy taxa like <italic>Cibicides</italic> (22 %) and <italic>Ammonia</italic> (5 %) (Scott et al., 2003) (Figs. 4c and 5). The
low relative abundance of <italic>B. marginata</italic> (2 %) and <italic>S. fusiformis</italic> (5 %) additionally suggests that
OM at these locations has good nutritional value, and current activity is
present at these sites (reduced stratification, possibly vertical mixing).
Therefore, assemblages showing this composition are likely to reflect
depositional environments with mild or episodic current activity and
moderate organic content.</p>
</sec>
<sec id="Ch1.S4.SS3.SSS4">
  <label>4.3.4</label><?xmltex \opttitle{Group 4 -- \textit{Cibicides} spp. and \textit{Rosalina} spp.}?><title>Group 4 – <italic>Cibicides</italic> spp. and <italic>Rosalina</italic> spp.</title>
      <p id="d1e4538">In Group 4, the dominant taxa is <italic>Cibicides</italic> (<inline-formula><mml:math id="M133" display="inline"><mml:mrow><mml:mo>∼</mml:mo><mml:mn mathvariant="normal">57</mml:mn></mml:mrow></mml:math></inline-formula> %) followed by
<italic>Rosalina</italic> (8 %) (Fig. 5), which reflect marginal to open-sea conditions and
vigorous bottom currents (Fig. 4c) (Alve
and Murray 1999; Jennings, 2004; Klitgaard-Kristensen and Sejrup, 2002). A
clear relationship is evident between low organics (OC 4.2 %, ROM 3.2 %
LOM 1.5 %) (Fig. 4c) and the dominance of <italic>Cibicides</italic> (Figs. 4c and 5). All locations
falling in Group 4 are on the path of Atlantic Ocean waters entering the
fjords, meaning that this assemblage composition is most likely found in
areas dominated by sea processes.</p>
</sec>
<sec id="Ch1.S4.SS3.SSS5">
  <label>4.3.5</label><title>Other drivers influencing modern benthic foraminifera distribution</title>
      <p id="d1e4569">Seawater properties can compete with OC and OM in influencing the
distribution of benthic foraminifera across the six voes; BWS and
the <inline-formula><mml:math id="M134" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> concentration in particular may exert a 2nd-order control on the composition of
foraminiferal assemblages (Jorissen
et al., 1995; Van Der Zwaan et al., 1999). A highly variable BWS generally
influences the distribution of<?pagebreak page4195?> stenohaline (strictly marine species) and
euryhaline species (able to adapt to a wide range of salinity) along BWS
gradients; however, in Shetland, BWS is almost constant across the voes
(Fig. 2), having a very minimal influence on benthic foraminiferal assemblages
(Fig. 4c). Similarly, bottom waters are mostly well-oxygenated ([<inline-formula><mml:math id="M135" display="inline"><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula>]
<inline-formula><mml:math id="M136" display="inline"><mml:mrow><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:math></inline-formula> mg L<inline-formula><mml:math id="M137" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>) in all the voes (Fig. 2), meaning that food
availability is the main driver of changes in the composition of benthic
assemblages (Jorissen
et al., 1995; Van Der Zwaan et al., 1999). It should be noted that the seawater
properties reported in Fig. 2 were measured in 2009 and may differ from the
actual conditions in 2015 when sediment samples were collected;
nevertheless, our results show that similar dynamics were most likely in
place in 2015, as the two sets of measurements compare very well in
depicting local environmental dynamics.</p>
      <p id="d1e4616">Food availability is deeply connected to organic fluxes and the transport of
organic matter to the seafloor; hence, relationships are found between
benthic foraminiferal assemblages and depositional environments (Figs. 4c
and 5). Only one station in Olna Firth (MD15-11) has poorly oxygenated
bottom waters (<inline-formula><mml:math id="M138" display="inline"><mml:mrow><mml:mrow class="chem"><mml:msub><mml:mi mathvariant="normal">O</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:math></inline-formula> mg L<inline-formula><mml:math id="M139" display="inline"><mml:msup><mml:mi/><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:math></inline-formula>), which could represent the
onset of hypoxic conditions (Vaquer-Sunyer and
Duarte, 2008) potentially affecting the distribution of benthic foraminifera
(Fig. 2). The benthic foraminiferal assemblage of this location reflects not
only organic-rich sediments, but also stratified waters and low oxygen
concentrations, pointing to a stressed environment (Fig. 4c). However, this
is far from the dysoxic–anoxic conditions required for a switch from
food-limited to oxygen-limited conditions (Fig. 2). Therefore, the quantity
and quality (labile vs. refractory) of organic matter reaching the seafloor
is still the major control on the benthic foraminiferal assemblage found at
station MD15-11.</p>
</sec>
</sec>
<sec id="Ch1.S4.SS4">
  <label>4.4</label><title>Comparison with other fjords</title>
<sec id="Ch1.S4.SS4.SSS1">
  <label>4.4.1</label><title>Spatial distribution and sources of OM and C</title>
      <p id="d1e4663">The processes governing OM and C inputs in west Shetland voes are comparable
with those reported for other Scottish fjords by Smeaton et
al. (2017), who found a relationship between the OC content in Scottish
fjords and their physical characteristics such as tidal range,
precipitation, catchment area and runoff. However, as catchments in west
Shetland transport sediment from the adjacent C-rich peatlands into the
marine system, west Shetland voes overall store more TC (Fig. S1) compared to other Scottish fjords
(Smeaton et al., 2016). On average, the TC
content of the six west Shetland voes is 8.8 %, whereas TC in other
Scottish fjords ranges between 0 % and 8 % (Smeaton et al., 2017
in Fig. 5). Nevertheless, as stated in Smeaton et al. (2017), there are similarities between Scotland's mainland fjords and these
six voes in west Shetland. For example, fjords like Loch Broom and Little
Loch Broom in Scotland have relatively unrestricted geomorphologies, which
makes them highly efficient in capturing IC, similar to Clift Sound and
Vaila Sound in Shetland (Fig. 3). Transient low oxygen concentrations in
Scotland's mainland fjords seem to be an important factor in the burial and
preservation of OC (Gillibrand et al., 2006).
Similarly, low oxygen levels in Olna Firth (Fig. 2), also indicated by
benthic foraminiferal assemblages (Fig. 4c), are associated with the
preservation of labile organic matter and OC (Figs. 3 and 4c). Additionally,
carbon stable isotope values in Shetland are in range with carbon stable
isotope measurements of other Scottish sea lochs: Sunart (average <inline-formula><mml:math id="M140" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">22.37</mml:mn></mml:mrow></mml:math></inline-formula> ‰, ranging from <inline-formula><mml:math id="M141" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">24.42</mml:mn></mml:mrow></mml:math></inline-formula> ‰ to <inline-formula><mml:math id="M142" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">21.37</mml:mn></mml:mrow></mml:math></inline-formula> ‰), Teacius (average <inline-formula><mml:math id="M143" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">24.79</mml:mn></mml:mrow></mml:math></inline-formula> ‰, <inline-formula><mml:math id="M144" display="inline"><mml:mrow><mml:mi>n</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">15</mml:mn></mml:mrow></mml:math></inline-formula>)
(Smeaton and Austin, 2017), Creran (average
<inline-formula><mml:math id="M145" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">21.98</mml:mn></mml:mrow></mml:math></inline-formula> ‰ varying between <inline-formula><mml:math id="M146" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">24.7</mml:mn></mml:mrow></mml:math></inline-formula> ‰ and <inline-formula><mml:math id="M147" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">17.3</mml:mn></mml:mrow></mml:math></inline-formula> ‰) and Etive (average <inline-formula><mml:math id="M148" display="inline"><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">25.8</mml:mn></mml:mrow></mml:math></inline-formula> ‰, <inline-formula><mml:math id="M149" display="inline"><mml:mrow><mml:mi>n</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">3</mml:mn></mml:mrow></mml:math></inline-formula>)
(Loh et al., 2008).</p>
</sec>
<sec id="Ch1.S4.SS4.SSS2">
  <label>4.4.2</label><title>Benthic foraminiferal assemblages</title>
      <p id="d1e4779">Our knowledge of benthic foraminiferal assemblages in Scottish fjords is
limited to studies based on fauna from Loch Etive
(Murray et al., 2003; Nørgaard-Pedersen et al., 2006) and their response to
changes in sea level and terrigenous input entering the catchment. Species
in common with west Shetland voes include <italic>Cibicides lobatulus</italic>, <italic>Ammonia batavus</italic> and <italic>E. scaber</italic>. Assemblages dominated by
<italic>C. lobatulus</italic> and <italic>A. batavus</italic> in Loch Etive indicate marine conditions and intensified bottom
currents possibly associated with deepwater renewal events
(Nørgaard-Pedersen et al., 2006). This agrees well with the assemblages
dominated by <italic>Cibicides</italic> spp. and <italic>Rosalina</italic> spp. observed in Clift Sound and Vaila Sound
suggestive of high-energy environments (Fig. 5). The dominance of
agglutinated species such as <italic>E. scaber</italic> occurs in Loch Etive when OM deposition
increases, eventually resulting in low oxygen levels in bottom waters and
carbonate dissolution (Murray
et al., 2003; Nørgaard-Pedersen et al., 2006). We observed similar
environmental conditions and assemblages in Olna Firth, the middle of Busta
Voe and the inner basin of Sand Sound (Figs. 4c and 5).</p>
      <p id="d1e4807">Similarities can also be observed between assemblages from the Scottish
coast and shelf and west Shetland voes. Klitgaard-Kristensen and
Sejrup (2002) and Murray (2003) found a high abundance of <italic>C. lobatulus</italic> and
<italic>Rosalina</italic> sp. in areas with strong currents, low organics and coarse-grained sediments.
We do not see a correlation between grain size and <italic>Cibicides</italic> or <italic>Rosalina</italic> in our samples due to
the multiple forcings driving particle size distribution in Shetland (bottom
current intensity vs. terrigenous supply); however, we do observe a clear
correlation between a high relative abundance of <italic>Cibicides</italic> and <italic>Rosalina</italic> and low organics and
high-energy environments (Figs. 4c and 5). Klitgaard-Kristensen
and Sejrup (2002) and Murray (2003) also found a
relationship between the dominance of <italic>B. marginata</italic> and low oxygen levels, high organics
and fine sediments. Additionally, Murray (2003) also observed <italic>S. fusiformis</italic>-dominated
assemblages in association with a high availability of LOM and low<?pagebreak page4196?> oxygen
levels. Overall, this compares really well with the assemblage we described
in Group 2 (Figs. 4c and 5).</p>
      <p id="d1e4835">A recent study by Murray and Alve (2016) synthesises benthic foraminiferal biogeography in NW European fjords,
mostly focusing on Norwegian fauna. Similarities with west Shetland voes
include <italic>C. lobatulus</italic> as an “Atlantic species”, pointing to the influence of Atlantic
Ocean waters on local estuarine and fjordic circulation. Assemblages dominated
by <italic>E. scaber</italic> have been observed in Oslofjord and Drammensfjord in Norway (Alve, 1995; Alve and Nagy,
1986) and Gullmar Fjord in Sweden (Qvale et al., 1984),
generally associated with organic-rich sediments and shallow waters.
Additionally, Klitgaard-Kristensen and
Buhl-Mortensen (1999) found a high relative abundance of the opportunistic
species <italic>S. fusiformis</italic> in Norwegian fjords with a high percentage of sand and organic
carbon, as well as assemblages characterised by <italic>B. marginata</italic> in environments rich in ROM.</p>
      <p id="d1e4850">In our sample set, we had no means to distinguish in situ tests from potentially
advected tests when picking and counting unstained specimens, and the close
match between our benthic foraminiferal assemblages and published data
suggests that advection of material from other locations, especially in the
more energetic environments, is negligible. Overall, benthic foraminiferal
assemblages do respond to variations in the amount of OM and OC becoming
deposited in fjord sediments (Fig. 4c), and comparisons can be drawn between
fjordic systems. We recognise that this is a qualitative approach and we are
not able to quantify changes in OM or OC content reaching the seafloor based
on foraminiferal assemblages. However, this study provides an initial
insight into the use of foraminifera to discriminate between
post-depositional OC degradation and actual OC burial and accumulation in
fjords, as foraminifera would only preserve the latter information in their
assemblage composition. We reckon, however, that extreme conditions at the
seafloor may result in the post-depositional dissolution of benthic
foraminiferal tests, which would obviously compromise the assemblage
composition. For this reason, we recommend carefully considering the level
of preservation of each assemblage and, when necessary, making appropriate
remarks on etching tests and other possible signs of test dissolution
(e.g. Khanna et al., 2013). Additionally,
assemblages dominated by agglutinated species like in Group 2 might have a
lower diagnostic potential in their application down-core compared to their
hyaline and porcelaneous counterpart due to a tendency to be poorly
preserved in the fossil record. Nevertheless, foraminifera are generally
abundant in the fossil record; this approach shows down-core potential to
support reconstructions of changes in OC burial and accumulation over time
and could be paired with statistical and spatial model studies to tease out
post-depositional OC degradation.</p>
</sec>
</sec>
</sec>
<sec id="Ch1.S5" sec-type="conclusions">
  <label>5</label><title>Conclusions</title>
      <p id="d1e4864">Our records from west Shetland voes provide new insights into sediment
provenance and type, modern benthic foraminiferal spatial distribution
across environmental gradients, and their use as indicators for OC
enrichment in fjordic systems. Our results support a terrestrial source of
both OM and OC in land-locked areas and calm depositional settings in west
Shetland voes. Additionally, in locations characterised by low bottom water
oxygenation, LOM is present in higher percentages than at well-ventilated
sites. Conversely, marine processes govern IC storage, with higher
concentrations in marginal to open marine settings. Benthic foraminiferal
assemblages reliably reflect changes in OC content reaching the seafloor and
show great potential as bio-indicators to trace these changes over time. We
were able to identify four groups (75 % confidence) based on foraminiferal
relative abundance data, which reflect four types of depositional setting:
(1) land-locked with high organics and very weak currents; (2) stressed
environments with high organics, a heavily stratified water column and low
oxygen concentrations; (3) transitional environments characterised by moderate
concentrations of organics and mild or intermittent currents; and (4) marginal to
coastal settings with low organics and a high-energy environment.</p>
      <p id="d1e4867">Therefore, studies aiming to reconstruct past variations in the amount of OC
reaching the seafloor and becoming stored therein could benefit from the use
of benthic foraminifera assemblages as a qualitative approach to understand
OC preservation in the sediment column and, for example, ground truth model
predictions.</p>
</sec>

      
      </body>
    <back><notes notes-type="dataavailability"><title>Data availability</title>

      <p id="d1e4874">Foraminiferal data are archived and available at <ext-link xlink:href="https://doi.org/10.1594/PANGAEA.907351" ext-link-type="DOI">10.1594/PANGAEA.907351</ext-link> (Cappelli et al., 2019).</p>
  </notes><app-group>
        <supplementary-material position="anchor"><p id="d1e4880">The supplement related to this article is available online at: <inline-supplementary-material xlink:href="https://doi.org/10.5194/bg-16-4183-2019-supplement" xlink:title="pdf">https://doi.org/10.5194/bg-16-4183-2019-supplement</inline-supplementary-material>.</p></supplementary-material>
        </app-group><notes notes-type="authorcontribution"><title>Author contributions</title>

      <p id="d1e4889">WENA and ELGC designed the study. ELGC, JC and CS analysed sediment
physical properties, while ELGC and WENA worked on benthic foraminiferal
assemblages. KD provided hydrographic data. ELGC prepared the paper
with contributions from all co-authors.</p>
  </notes><notes notes-type="competinginterests"><title>Competing interests</title>

      <p id="d1e4895">The authors declare that they have no conflict of interest.</p>
  </notes><ack><title>Acknowledgements</title><p id="d1e4901">The crew of the MV <italic>Moder Dy</italic> are gratefully acknowledge for support of the
work during the cruise in Shetland. We are thankful to undergraduate
students Laura Smith, Leonie Strobl and Bethan Hudd for their help in the
microscopy lab<?pagebreak page4197?> assisting with benthic foraminifera picking. We thank two anonymous
referees for valuable and constructive comments that improved the
paper.</p></ack><notes notes-type="financialsupport"><title>Financial support</title>

      <p id="d1e4909">This project was
supported by BBSRC/NERC (ref. BB/M026620/01). Isotope analysis was supported
by the NERC Life Science Mass Spectrometry Facility (CEH_L_098_11_2015). KD was  funded
by the EU Interreg IV Northern Periphery project WATER (Warning of Algal Toxin Events to Support Aquaculture in the NPP Coastal Zone Region) and
by the northwest Europe Interreg project PRIMROSE.</p>
  </notes><notes notes-type="reviewstatement"><title>Review statement</title>

      <p id="d1e4915">This paper was edited by Hiroshi Kitazato and reviewed by three anonymous referees.</p>
  </notes><ref-list>
    <title>References</title>

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    <!--<article-title-html>Organic-carbon-rich sediments: benthic foraminifera as bio-indicators of depositional environments</article-title-html>
<abstract-html><p>Fjords have been described as hotspots for carbon burial,
potentially playing a key role within the carbon cycle as climate regulators
over multiple timescales. Nevertheless, little is known about the long-term
fate of the carbon that may become stored in fjordic sediments. One of the
main reasons for this knowledge gap is that carbon arriving on the seafloor
is prone to post-depositional degradation, posing a great challenge when
trying to discriminate between an actual change in the carbon deposition rate
and post-depositional carbon loss. In this study, we evaluate the use of
modern benthic foraminifera as bio-indicators of organic carbon content in
six voes (fjords) on the west coast of Shetland. Benthic foraminifera are
known to be sensitive to changes in organic carbon content in the sediments,
and changes in their assemblage composition therefore reflect synchronous
variations in the quantity and quality of carbon reaching the seafloor. We
identified four environments based on the relationship between benthic
foraminiferal assemblages and organic carbon content in the sediments: (1) land-locked regions influenced by riverine and/or freshwater inputs of organic
matter, namely the head of fjords with a restricted geomorphology; (2) stressed environments with a heavily stratified water column and sediments
rich in organic matter of low nutritional value; (3) depositional
environments with moderate organic content and mild or episodic current
activity; and (4) marginal to coastal settings with low organic content, such as
fjords with an unrestricted geomorphology. We conclude that foraminifera
potentially provide a tool to disentangle primary organic carbon signals
from post-depositional degradation and loss of organic carbon because of
their environmental sensitivity and high preservation potential in the
sedimentary record.</p></abstract-html>
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