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<article xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:oasis="http://docs.oasis-open.org/ns/oasis-exchange/table" xml:lang="en" dtd-version="3.0" article-type="research-article"><?xmltex \bartext{Research article}?>
  <front>
    <journal-meta><journal-id journal-id-type="publisher">BG</journal-id><journal-title-group>
    <journal-title>Biogeosciences</journal-title>
    <abbrev-journal-title abbrev-type="publisher">BG</abbrev-journal-title><abbrev-journal-title abbrev-type="nlm-ta">Biogeosciences</abbrev-journal-title>
  </journal-title-group><issn pub-type="epub">1726-4189</issn><publisher>
    <publisher-name>Copernicus Publications</publisher-name>
    <publisher-loc>Göttingen, Germany</publisher-loc>
  </publisher></journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.5194/bg-20-121-2023</article-id><title-group><article-title>Paleoecology and evolutionary response of planktonic<?xmltex \hack{\break}?> foraminifera to the
mid-Pliocene Warm Period and<?xmltex \hack{\break}?> Plio-Pleistocene bipolar ice sheet expansion</article-title><alt-title>Paleoecology and evolutionary response of planktonic foraminifera</alt-title>
      </title-group><?xmltex \runningtitle{Paleoecology and evolutionary response of planktonic foraminifera}?><?xmltex \runningauthor{A.~Woodhouse et al.}?>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1 aff2">
          <name><surname>Woodhouse</surname><given-names>Adam</given-names></name>
          <email>adam.woodhouse@austin.utexas.edu</email>
        <ext-link>https://orcid.org/0000-0002-5877-8742</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Procter</surname><given-names>Frances A.</given-names></name>
          
        <ext-link>https://orcid.org/0000-0003-0340-4070</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Jackson</surname><given-names>Sophie L.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Jamieson</surname><given-names>Robert A.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Newton</surname><given-names>Robert J.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3">
          <name><surname>Sexton</surname><given-names>Philip F.</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Aze</surname><given-names>Tracy</given-names></name>
          
        </contrib>
        <aff id="aff1"><label>1</label><institution>School of Earth and Environment, University of Leeds, Leeds, LS2 9JT,
UK</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>University of Texas Institute for Geophysics, University of Texas at
Austin, Austin, TX, 78758, USA</institution>
        </aff>
        <aff id="aff3"><label>3</label><institution>School of Environment, Earth and Ecosystem Sciences, Open University,
Walton Hall,<?xmltex \hack{\break}?> Kents Hill, Milton Keynes, MK7 6AA, UK</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Adam Woodhouse (adam.woodhouse@austin.utexas.edu)</corresp></author-notes><pub-date><day>9</day><month>January</month><year>2023</year></pub-date>
      
      <volume>20</volume>
      <issue>1</issue>
      <fpage>121</fpage><lpage>139</lpage>
      <history>
        <date date-type="received"><day>28</day><month>August</month><year>2022</year></date>
           <date date-type="rev-request"><day>19</day><month>September</month><year>2022</year></date>
           <date date-type="rev-recd"><day>10</day><month>November</month><year>2022</year></date>
           <date date-type="accepted"><day>18</day><month>November</month><year>2022</year></date>
      </history>
      <permissions>
        <copyright-statement>Copyright: © 2023 </copyright-statement>
        <copyright-year>2023</copyright-year>
      <license license-type="open-access"><license-p>This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">https://creativecommons.org/licenses/by/4.0/</ext-link></license-p></license></permissions><self-uri xlink:href="https://bg.copernicus.org/articles/.html">This article is available from https://bg.copernicus.org/articles/.html</self-uri><self-uri xlink:href="https://bg.copernicus.org/articles/.pdf">The full text article is available as a PDF file from https://bg.copernicus.org/articles/.pdf</self-uri>
      <abstract><title>Abstract</title>

      <p id="d1e156">The Pliocene-Recent is associated with many important climatic and
paleoceanographic changes, which have shaped the biotic and abiotic nature of
the modern world. The closure of the Central American Seaway and the
development and intensification of Northern Hemisphere ice sheets had
profound global impacts on the latitudinal and vertical structure of the
oceans, triggering the extinction and radiation of many marine groups. In
particular, marine calcifying planktonic foraminifera, which are highly
sensitive to water column structure, exhibited a series of extinctions as
global temperatures fell. By analyzing high-resolution (<inline-formula><mml:math id="M1" display="inline"><mml:mo lspace="0mm">∼</mml:mo></mml:math></inline-formula> 5 kyr) sedimentary records from the Eastern Equatorial Pacific Ocean,
complemented with global records from the novel Triton dataset, we document
the biotic changes in this microfossil group, within which three species
displayed isochronous co-extinction, and species with cold-water affinity
increased in dominance as meridional temperature gradients steepened. We
suggest that these changes were associated with the terminal stages of the
closure of the Central American Seaway, where following the sustained warmth
of the mid-Pliocene Warm Period, bipolar ice sheet expansion initiated a
world in which cold- and deep-dwelling species became increasingly more
successful. Such global-scale paleoecological and macroevolutionary
variations between the Pliocene and the modern icehouse climate would
suggest significant deviations from pre-industrial baselines within modern
and future marine plankton communities as anthropogenic climate forcing
continues.</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <label>1</label><title>Introduction</title>
      <p id="d1e175">Current observations suggest that the Earth is shifting from its
pre-industrial state (Beaugrand et al., 2002; Cheung et al., 2013; Ceballos et
al., 2015; Urban, 2015; Barton et al., 2016; Pinksy et al., 2018; Jonkers et
al., 2019; Tierney et al. 2020; Edwards et al., 2022), and changes in the
vertical and latitudinal structure of the marine realm are ultimately likely
to take place (Hu et al., 2011; Rhein et al., 2013; Purich et al., 2018;
Zika et al., 2018; Bindoff et al., 2019; Golledge et al., 2019). It is
therefore important to understand how ecosystems such as the open ocean,
which contain resources vital to human populations (Worm et al., 2003;
Tittensor et al., 2010), respond to short- and long-term oceanographic shifts
(e.g., Norris et al., 2013).</p>
      <p id="d1e178">The timing of closure for the Isthmus of Panama at <inline-formula><mml:math id="M2" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 4.7–2.7 Ma (Keigwin, 1978, 1982; Keller et al., 1989; Haug and Tiedemann, 1998;
Haug et al., 2001; Groeneveld et al., 2006; Steph et al., 2006, 2010;
Molnar, 2008; Fedorov et al., 2013; O'Dea et al., 2016) remains contentious,
though the ultimate role of this event in late Cenozoic icehouse evolution
is clear, proving to be pivotal to the intensification of Northern Hemisphere
glaciations. The precise dating of the final isthmus formation is less essential
than the repercussions of the gradual shoaling and restriction of the
Central American Seaway (CAS), which triggered significant global
paleoceanographic effects fundamental to the evolution of the present
climate state. The gradual restriction of consistent throughflow between the
tropical Atlantic and Indo-Pacific Oceans via isthmus formation (O'Dea et
al., 2016) was coupled with bipolar cryosphere development that
significantly restructured global vertical and meridional temperature
gradients (Schmidt et al., 2004a, b; Mudelsee and Raymo, 2005;
Boscolo-Galazzo and Crichton et al., 2021; Boscolo-Galazzo et al., 2022;
Ford et al., 2022; Gaskell et al., 2022), altering marine ecosystems and
trophic structure (Woodhouse and Swain et al., 2023). The recorded
effects on global paleoceanography and biodiversity are of particular
importance, as this ice sheet expansion was preceded by the sustainedly
warmer world of the Pliocene. In particular, the mid-Pliocene Warm Period
(mPWP, 3.264–3.025; Dowsett et al., 2012; Haywood et al., 2016) is
increasingly imperative to our understanding of future climate change as
global continental configuration, faunal and floral distributions, mean
global temperatures (2–3 <inline-formula><mml:math id="M3" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C warmer than pre-industrial), and
<inline-formula><mml:math id="M4" display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula>CO<inline-formula><mml:math id="M5" display="inline"><mml:msub><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:math></inline-formula> (350–450 ppm) were comparable to levels expected by the closure of
the twenty-first century (Chandler et al., 1994; Haywood et al., 2000, 2016;
Jiang et al., 2005; Pagani et al., 2010; Seki et al., 2010; Bartoli et al.,
2011; IPCC, 2022).</p>
      <p id="d1e213">To assess the biological responses to these marine ecosystem changes, we
look to the Cenozoic marine microfossil record, specifically the planktonic
foraminifera, single-celled marine protists with a global distribution and
the most complete Cenozoic species-level fossil record (Aze et al., 2011;
Fenton and Woodhouse et al., 2021). Their calcareous skeletons, or tests,
preserve not only their entire life history, but also a biogeochemical
expression of the surrounding water column (e.g., Edgar et al., 2017). These
features allow for high-resolution species-specific quantification of
physiological and ecological adaptation through periods of climate
variability (e.g., Knappertsbusch, 2007; Wade et al., 2008, 2016; Hull and
Norris, 2009; Wade and Olsson, 2009; Edgar et al., 2013a; Aze et al., 2014;
Pearson and Ezard, 2014; Weinkauf et al., 2014, 2019; Brombacher et al.,
2017a, 2021; Falzoni et al., 2018; Si and Aubry, 2018; Fox et al., 2020;
Todd et al., 2020; Kearns et al., 2021, 2022; Pearson and Penny, 2021; Shaw
et al., 2021; Woodhouse et al., 2021; Friesenhagen, 2022; Hupp et al., 2022;
Woodhouse and Swain et al., 2023).</p>
      <p id="d1e216">Here, we report the high-resolution biotic response of planktonic
foraminifera during the terminal stages of closure of the CAS in the Eastern
Equatorial Pacific (EEP) Ocean, focusing on the co-extinction of three
members of the genus <italic>Dentoglobigerina</italic> through documentation of high-resolution
(<inline-formula><mml:math id="M6" display="inline"><mml:mo lspace="0mm">∼</mml:mo></mml:math></inline-formula> 5 kyr) paired single-specimen morphometric, with multi- and
single-specimen geochemical analyses, and their paleoceanographic
implications. Moreover, we assess the global paleoecological response of
planktonic foraminifera from the Pliocene to the Recent, assessing the role
of the transition from the sustained warmth of the Pliocene to the bipolar
icehouse world of Pleistocene-Recent on global planktonic foraminiferal
macroevolutionary dynamics.</p>
</sec>
<sec id="Ch1.S2">
  <label>2</label><title>Methods</title>
<sec id="Ch1.S2.SS1">
  <label>2.1</label><title>Site selection</title>
      <p id="d1e244">The integrated Ocean Drilling Program Expedition 321 Site U1338 (Hole 1338A)
(2<inline-formula><mml:math id="M7" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>30.469<inline-formula><mml:math id="M8" display="inline"><mml:msup><mml:mi/><mml:mo>′</mml:mo></mml:msup></mml:math></inline-formula> N, 17<inline-formula><mml:math id="M9" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>58.162<inline-formula><mml:math id="M10" display="inline"><mml:msup><mml:mi/><mml:mo>′</mml:mo></mml:msup></mml:math></inline-formula> W), situated in
the EEP, was drilled to 410 m below seafloor (mbsf) through Holocene –
early Miocene pelagic sediments (Pälike et al., 2010). At
<inline-formula><mml:math id="M11" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 3 Ma, the site was at <inline-formula><mml:math id="M12" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 2<inline-formula><mml:math id="M13" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> N
paleolatitude (Drury et al., 2014) in a deep-water pelagic environment of
similar water depth to the modern (<inline-formula><mml:math id="M14" display="inline"><mml:mo lspace="0mm">∼</mml:mo></mml:math></inline-formula> 4 km). The primary
lithologies represented are calcareous, diatomaceous and radiolarian
nannofossil oozes and chalks. Despite the deep-water settings, and primarily
calcareous nature of the sediments, excellent microfossil preservation has
been recorded in planktonic foraminiferal specimens through intervals of
this core (Fox and Wade, 2013; Woodhouse et al., 2021). A preliminary
assessment of core U1338A was carried out to determine the approximate
position of the extinction of several species of <italic>Dentoglobigerina</italic>  (<inline-formula><mml:math id="M15" display="inline"><mml:mo lspace="0mm">∼</mml:mo></mml:math></inline-formula> 3 Ma)
based on tropical biostratigraphy  (Wade et al., 2011), and shipboard
paleomagnetic data (Pälike et al., 2010).</p>
</sec>
<sec id="Ch1.S2.SS2">
  <label>2.2</label><title>Foraminiferal assemblage analysis</title>
      <p id="d1e332">Sediment volumes of 20–40 cm<inline-formula><mml:math id="M16" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">3</mml:mn></mml:msup></mml:math></inline-formula> were collected and washed with de-ionized
water over a 63 <inline-formula><mml:math id="M17" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m sieve; the residues were dried in an oven at 40 <inline-formula><mml:math id="M18" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C and split. All samples were examined using a Zeiss Stemi 305
Compact Stereo Microscope. Planktonic foraminifers were identified following
the taxonomy of Kennett and Srinivasan (1983), Schiebel and Hemleben (2017),
and Wade et al. (2018). We performed assemblage counts on <inline-formula><mml:math id="M19" display="inline"><mml:mrow><mml:mi mathvariant="italic">&gt;</mml:mi><mml:mn mathvariant="normal">63</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M20" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m splits yielding <inline-formula><mml:math id="M21" display="inline"><mml:mrow><mml:mi mathvariant="italic">&gt;</mml:mi><mml:mn mathvariant="normal">300</mml:mn></mml:mrow></mml:math></inline-formula> individuals (Table S1 in the Supplement).
Assessments of taxonomy and test preservation of foraminifera were performed
via analysis with the Tescan VEGA3 XM Scanning Electron Microscope (SEM) at
the University of Leeds, UK.</p>
      <p id="d1e390">Species were grouped by their ecology to assess the relative abundances of
taxa for paleoceanographic information, where taxa were assigned as either
shallow- and warm-water taxa (the ecogroups “symbiotic” and “asymbiotic”
of Aze et al., 2011), or deep- and cold-water taxa (the ecogroups
“thermocline”, “subthermocline” of Aze et al., 2011, and <italic>Globigerinita glutinata</italic>, Lutz, 2010).</p>
</sec>
<sec id="Ch1.S2.SS3">
  <label>2.3</label><title>Morphometric analysis</title>
      <p id="d1e404">Specimens of the genus <italic>Dentoglobigerina</italic> were measured to compare species size with stable
isotope ratios to investigate species ecology and ontogeny. Complete
specimens of <italic>Dentoglobigerina</italic> were picked and mounted in umbilical position on card slides
pierced with a fine needle to accommodate the variably spired nature of
species in the genus (Wade et al., 2018). Specimens were imaged umbilically
using a Zeiss Axio Zoom V16 microscope with attached Canon EOS 100D camera
at <inline-formula><mml:math id="M22" display="inline"><mml:mo>×</mml:mo></mml:math></inline-formula>19.4 magnification. All specimens were then rotated 90<inline-formula><mml:math id="M23" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula> laterally and imaged whilst propped onto their penultimate chamber. Images
were processed using the image analysis software Image Pro Premier, and the
maximum test diameter, previously deemed a statistically repeatable
measurement amongst <italic>Dentoglobigerina</italic> (Brombacher et al., 2017b, 2018; Woodhouse et al.,
2021), was captured from both orientations, and the lower of the two values
assigned as test size.</p>
</sec>
<sec id="Ch1.S2.SS4">
  <label>2.4</label><title>Geochemical analysis</title>
      <p id="d1e440">Following morphometric analysis, well-preserved specimens of
<italic>Dentoglobigerina altispira</italic> (<inline-formula><mml:math id="M24" display="inline"><mml:mrow><mml:mi mathvariant="italic">&gt;</mml:mi><mml:mn mathvariant="normal">200</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M25" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m), <italic>Dentoglobigerina baroemoenensis</italic> (<inline-formula><mml:math id="M26" display="inline"><mml:mrow><mml:mi mathvariant="italic">&gt;</mml:mi><mml:mn mathvariant="normal">200</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M27" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m) and
<italic>Dentoglobigerina globosa</italic> (<inline-formula><mml:math id="M28" display="inline"><mml:mrow><mml:mi mathvariant="italic">&gt;</mml:mi><mml:mn mathvariant="normal">200</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M29" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m) were picked, ultrasonicated in deionized water
for 10–15 s, and dried for stable isotope analysis. This process was
repeated for extant taxa representing known discrete ecological habitats
through the water column to determine the ecological niche habits of the
extinct dentoglobigerinids: <italic>Globigerinoides ruber</italic> (212–350 <inline-formula><mml:math id="M30" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m, surface mixed-layer (SML)),
<italic>Neogloboquadrina incompta</italic> (212–350 <inline-formula><mml:math id="M31" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m, subsurface), <italic>Globorotalia tumida</italic> (<inline-formula><mml:math id="M32" display="inline"><mml:mrow><mml:mi mathvariant="italic">&gt;</mml:mi><mml:mn mathvariant="normal">300</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M33" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m,
thermocline and/or photic zone base, corrected for a 1.0 ‰
<inline-formula><mml:math id="M34" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">13</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>C enrichment due to this species   occupying the shallow oxygen
minimum zone and the consequential effects of reduced ambient pH, Lohmann, 1995;
Bijma et al., 1999; Uchikawa and Zeebe, 2010; Birch et al., 2013),
<italic>Globorotalia scitula</italic> (212–300 <inline-formula><mml:math id="M35" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m, subthermocline), and <italic>Cibicidoides wuellerstorfi</italic> (<inline-formula><mml:math id="M36" display="inline"><mml:mrow><mml:mi mathvariant="italic">&gt;</mml:mi><mml:mn mathvariant="normal">212</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M37" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m,
bottom-water) (see Cramer et al., 2009, 2011; Rasmussen and Thomsen, 2010;
Aze et al., 2011; Woodhouse et al., 2021). Single specimens of
dentoglobigerinids and multiple specimens of other foraminifer species were
analyzed using an Elementar IsoPrime Dual-Inlet Isotope Ratio Mass
Spectrometer in the School of Earth and Environment at the University of
Leeds, and data were reported to the Vienna Peedee belemnite (VPDB) scale
using a Carrara marble standard (Elemental Microanalysis B2214), where
analytical precision was better than 0.07 ‰ and 0.13 ‰ for
<inline-formula><mml:math id="M38" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">13</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>C and <inline-formula><mml:math id="M39" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O, respectively.</p>
      <p id="d1e618">Specimens of <italic>Cibicidoides wuellerstorfi</italic> were also used to create a benthic foraminiferal <inline-formula><mml:math id="M40" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O record for this study to supplement the shipboard paleomagnetic
data (Pälike et al., 2010). This record was constructed and tuned to the
Ocean Drilling Program Site 849/IODP Site 1338 stack constructed by Lyle et
al. (2019) using QAnalySeries software (Kotov and Pälike 2018) to
better constrain the timing of events (see Woodhouse et al., 2021), where
the study section is calculated to represent the Pliocene interval from
<inline-formula><mml:math id="M41" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 3.47–2.98 Ma.</p><?xmltex \hack{\newpage}?>
</sec>
<sec id="Ch1.S2.SS5">
  <label>2.5</label><title>Global data analysis</title>
      <p id="d1e652">To investigate how planktonic foraminiferal macroevolution and paleoecology
has developed since the Pliocene, the Triton dataset (Fenton and Woodhouse
et al., 2021) was downloaded, and all macroperforate planktonic
foraminiferal records occurring from 5.3–0 Ma (early Pliocene-Recent) were
binned into 53-time bins with equal length (100 kyrs). Species were assigned
the speciation and extinction datums in accordance with Aze et al. (2011)
and Fenton and Woodhouse et al. (2021), and all species occurrences located
outside of these assigned stratigraphic ranges were removed. This range
trimming was applied to eliminate much of the occurrence data likely
attributable to misidentification and/or reworking that may create
artificial “tails” within speciation and extinction data (Liow et al.,
2010; Lazarus et al., 2012; Flannery-Sutherland et al., 2022). The trimming
of taxa resulted in a dataset of 239 317 planktonic foraminiferal
occurrences. Furthermore, all species were assigned to their respective
“ecogroups”, which represent broad ecological categories based on
paleoecological and phylogenetic data (Aze et al., 2011). These ecogroups
are defined as: ecogroup 1 <inline-formula><mml:math id="M42" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> surface mixed layer dweller with
photosymbionts, ecogroup 2 <inline-formula><mml:math id="M43" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> surface mixed layer dweller without
photosymbionts, ecogroup 3 <inline-formula><mml:math id="M44" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> thermocline dweller, and ecogroup 4 <inline-formula><mml:math id="M45" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> subthermocline dweller, ecogroup 5 <inline-formula><mml:math id="M46" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> high-latitude.</p>
</sec>
</sec>
<sec id="Ch1.S3">
  <label>3</label><title>Results</title>
<sec id="Ch1.S3.SS1">
  <label>3.1</label><title>Assemblage records</title>
      <p id="d1e706">All sediments contain a highly abundant well-preserved (Fig. 1) open-ocean
planktonic foraminifer assemblage comprising <inline-formula><mml:math id="M47" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 70
morphospecies. The dominant genera through the section included
<italic>Neogloboquadrina, Globigerinoides, Pulleniatina</italic>, and <italic>Globigerinita</italic> (see Supplement). The isochronous extinction of the species <italic>D. altispira</italic>, <italic>D. baroemoenensis</italic>, and <italic>D. globosa</italic> in U1338A
occurs <inline-formula><mml:math id="M48" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 35.50 m b.s.f. (<inline-formula><mml:math id="M49" display="inline"><mml:mo lspace="0mm">∼</mml:mo></mml:math></inline-formula> 3.037 Ma). There is also
a notable influx of the species <italic>Menardella</italic> cf. <italic> exilis</italic> and <italic>Menardella</italic> cf. <italic>pertenuis</italic> occurring from <inline-formula><mml:math id="M50" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 42.58–40.56 m b.s.f. (<inline-formula><mml:math id="M51" display="inline"><mml:mo lspace="0mm">∼</mml:mo></mml:math></inline-formula> 3.45–3.36 Ma), after which they are absent
within the study section.</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F1" specific-use="star"><?xmltex \currentcnt{1}?><?xmltex \def\figurename{Figure}?><label>Figure 1</label><caption><p id="d1e775">Scanning electron micrographs of species analyzed for stable
isotope geochemistry. <bold>(1a)</bold> <italic>G. ruber</italic>, <bold>(1b)</bold> <italic>G. ruber</italic> shell ultrastructure showing excellent
preservation, <bold>(2)</bold> <italic>N. incompta</italic>, <bold>(3)</bold> <italic>G. tumida</italic>, <bold>(4)</bold> <italic>H. scitula</italic>, <bold>(5)</bold> <italic>C. wuellerstorfi</italic>. Scale bar for images <bold>(1a)</bold>, 2–5 <inline-formula><mml:math id="M52" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 100 <inline-formula><mml:math id="M53" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m,
for image <bold>(1b)</bold> <inline-formula><mml:math id="M54" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 10 <inline-formula><mml:math id="M55" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m. All specimens from sample U1338A-5H-4W-35/38.</p></caption>
          <?xmltex \igopts{width=369.885827pt}?><graphic xlink:href="https://bg.copernicus.org/articles/20/121/2023/bg-20-121-2023-f01.jpg"/>

        </fig>

      <p id="d1e859">Comparing the assemblage composition of warm and surface dwellers against
cold and deep dwellers, we document generally consistent species
abundances until <inline-formula><mml:math id="M56" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 36.26 m b.s.f. (<inline-formula><mml:math id="M57" display="inline"><mml:mo lspace="0mm">∼</mml:mo></mml:math></inline-formula> 3.08 Ma), where
the assemblage exhibits consistently greater abundances of cold and
deep dwellers for the rest of the record (Fig. 2).</p>
</sec>
<sec id="Ch1.S3.SS2">
  <label>3.2</label><title>Dentoglobigerina stable isotope-size trends</title>
      <p id="d1e884">Test preservation is excellent throughout the sampled interval, where
specimen walls appear optically translucent, and SEM images (Fig. 1)
indicate no observable diagenetic alteration, clean pore spaces, and spines
preserved within tests (Fig. 1a). Following artificial test breaking,
inspection of the wall ultrastructure (Fig. 1b) showed that no wall
recrystallization had taken place, suggesting stable isotope signals remain
unaltered (Sexton et al., 2006; Edgar et al., 2013b).   Single-specimen
<inline-formula><mml:math id="M58" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">13</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>C values for <italic>D. altispira</italic>, <italic>D. baroemoenensis</italic>, and <italic>D. globosa</italic> vary from <inline-formula><mml:math id="M59" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.54 ‰ to
<inline-formula><mml:math id="M60" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>3.53 ‰, <inline-formula><mml:math id="M61" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>0.30 ‰ to <inline-formula><mml:math id="M62" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>3.50 ‰, and
<inline-formula><mml:math id="M63" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>0.51 ‰ to <inline-formula><mml:math id="M64" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>2.84 ‰ (Fig. 3, Tables S3 and S4), respectively, whilst
<inline-formula><mml:math id="M65" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O values vary from <inline-formula><mml:math id="M66" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>3.56 ‰ to <inline-formula><mml:math id="M67" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.03 ‰,
<inline-formula><mml:math id="M68" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>2.99 ‰ to <inline-formula><mml:math id="M69" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.17 ‰, and <inline-formula><mml:math id="M70" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>1.92 ‰ to
<inline-formula><mml:math id="M71" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>1.05 ‰, respectively. In all three species, a positive
correlation is calculated between test size and <inline-formula><mml:math id="M72" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">13</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>C; however,
this relationship is only significant (<inline-formula><mml:math id="M73" display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mi mathvariant="italic">&lt;</mml:mi><mml:mn mathvariant="normal">0.0001</mml:mn></mml:mrow></mml:math></inline-formula>) in <italic>D. altispira</italic> and <italic>D. baroemoenensis</italic>,
potentially due to the greater number of specimens analyzed for these
species (Fig. 3). Regression slopes are similarly steep; however the slopes
for <italic>D. altispira</italic> and <italic>D. globosa</italic> are more alike. <italic>Dentoglobigerina baroemoenensis</italic> and <italic>D. globosa</italic> show no significant correlation between <inline-formula><mml:math id="M74" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O and test size; however, a significant (<inline-formula><mml:math id="M75" display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula> <inline-formula><mml:math id="M76" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 0.0006) negative
relationship is recorded in <italic>D. altispira</italic>. Once again, regression slopes for <italic>D. altispira</italic> and <italic>D. globosa</italic> are
similar, whereas for <italic>D. baroemoenensis</italic>, this slope is almost flat (Fig. 3).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F2"><?xmltex \currentcnt{2}?><?xmltex \def\figurename{Figure}?><label>Figure 2</label><caption><p id="d1e1087">Grouped assemblage data of warm-water taxa (ecogroups
“symbiotic” and “asymbiotic”) and cold-water taxa (ecogroups
“thermocline”, “subthermocline”, and <italic>Globigerinita glutinata</italic> (Lutz, 2010; Aze et al., 2011).
Foraminiferal <inline-formula><mml:math id="M77" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">13</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>C and <inline-formula><mml:math id="M78" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O, black <inline-formula><mml:math id="M79" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> <italic>C. wuellerstorfi</italic> (bottom
water), dark blue <inline-formula><mml:math id="M80" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> <italic>G. scitula</italic> (subthermocline), cyan <inline-formula><mml:math id="M81" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> <italic>G. tumida</italic> (thermocline), orange <inline-formula><mml:math id="M82" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> <italic>N. incompta</italic> (subsurface), red <inline-formula><mml:math id="M83" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> <italic>G. ruber</italic> (surface mixed-layer). The dashed line represents permanent switch to higher
proportion of cold-water taxa, and the gray box indicates where isotope records
exhibit high volatility, mPWP <inline-formula><mml:math id="M84" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> mid-Pliocene Warm Period.</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://bg.copernicus.org/articles/20/121/2023/bg-20-121-2023-f02.png"/>

        </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F3" specific-use="star"><?xmltex \currentcnt{3}?><?xmltex \def\figurename{Figure}?><label>Figure 3</label><caption><p id="d1e1182">Test size – <inline-formula><mml:math id="M85" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">13</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>C and <inline-formula><mml:math id="M86" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O relationships
for the three species of <italic>Dentoglobigerina</italic> that underwent extinction through the study
section. Trend lines for each species represent linear regressions based on
the entire per species dataset (dashed line). Significance (<inline-formula><mml:math id="M87" display="inline"><mml:mi>p</mml:mi></mml:math></inline-formula>) and measure
of fit (<inline-formula><mml:math id="M88" display="inline"><mml:mrow><mml:msup><mml:mi>r</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>) were calculated for each linear regression.</p></caption>
          <?xmltex \igopts{width=426.791339pt}?><graphic xlink:href="https://bg.copernicus.org/articles/20/121/2023/bg-20-121-2023-f03.png"/>

        </fig>

</sec>
<sec id="Ch1.S3.SS3">
  <label>3.3</label><title>Extant species geochemical records</title>
      <p id="d1e1242">Amongst the extant species picked from strict size fractions throughout the
study section, <italic>G. ruber</italic> <inline-formula><mml:math id="M89" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">13</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>C   values show the highest <inline-formula><mml:math id="M90" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">13</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>C
variability (<inline-formula><mml:math id="M91" display="inline"><mml:mo lspace="0mm">+</mml:mo></mml:math></inline-formula>0.7 ‰ to <inline-formula><mml:math id="M92" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>2.8 ‰) and <inline-formula><mml:math id="M93" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O
values varying from <inline-formula><mml:math id="M94" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>2.3 ‰ to <inline-formula><mml:math id="M95" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.8 ‰ (Fig. 4, Table S2).
Corrected <italic>G. tumida</italic> values show the lowest <inline-formula><mml:math id="M96" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">13</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>C variability (0 ‰ to
<inline-formula><mml:math id="M97" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>0.8 ‰), and the highest variability for <inline-formula><mml:math id="M98" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O (-1.3 ‰ to <inline-formula><mml:math id="M99" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>1.1 ‰). <italic>G. scitula</italic> <inline-formula><mml:math id="M100" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">13</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>C values
vary from <inline-formula><mml:math id="M101" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.6 ‰ to <inline-formula><mml:math id="M102" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>0.4 ‰, whilst <inline-formula><mml:math id="M103" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O
varies from <inline-formula><mml:math id="M104" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>0.8 ‰ to <inline-formula><mml:math id="M105" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>2.9 ‰, whereas bottom-water <italic>C. wuellerstorfi</italic> <inline-formula><mml:math id="M106" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">13</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>C   values vary from <inline-formula><mml:math id="M107" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.8 ‰ to <inline-formula><mml:math id="M108" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>0.5 ‰, and <inline-formula><mml:math id="M109" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O varies <inline-formula><mml:math id="M110" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>2.2 ‰ to <inline-formula><mml:math id="M111" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>3.1 ‰, showing the
lowest variability in <inline-formula><mml:math id="M112" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O (Fig. 4). The stable isotope records
of extant species generally tend to show low inter-sample variability,
however there is notable geochemical stochasticity within the <italic>G. tumida</italic> record
<inline-formula><mml:math id="M113" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 36.17–35.86 m b.s.f. (Fig. 2).</p>
      <p id="d1e1480">All three species of <italic>Dentoglobigerina</italic> analyzed in this study record mean stable isotopic
ratios similar to the extant species <italic>G. ruber</italic>, where all species indicated <inline-formula><mml:math id="M114" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O ratios less negative than <italic>G. ruber</italic>, and <italic>D. baroemoenensis</italic> and <italic>D. globosa</italic> show <inline-formula><mml:math id="M115" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">13</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>C ratios
more positive than this species (Figs. 3 and 4).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F4"><?xmltex \currentcnt{4}?><?xmltex \def\figurename{Figure}?><label>Figure 4</label><caption><p id="d1e1523"><inline-formula><mml:math id="M116" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">13</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>C and <inline-formula><mml:math id="M117" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O cross-plot 2 showing mean
values of all specimens analyzed in this study. Black <inline-formula><mml:math id="M118" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> <italic>C. wuellerstorfi</italic>, dark blue <inline-formula><mml:math id="M119" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> <italic>G. scitula</italic>, cyan <inline-formula><mml:math id="M120" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> <italic>G. tumida</italic>, orange <inline-formula><mml:math id="M121" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> <italic>N. incompta</italic>, red <inline-formula><mml:math id="M122" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> <italic>G. ruber</italic>, green <inline-formula><mml:math id="M123" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> <italic>D. altispira</italic>, purple <inline-formula><mml:math id="M124" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> <italic>D. baroemoenensis</italic>, pink <inline-formula><mml:math id="M125" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> <italic>D. globosa.</italic> Species
marked with an asterisk are benthic.</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://bg.copernicus.org/articles/20/121/2023/bg-20-121-2023-f04.png"/>

        </fig>

</sec>
<sec id="Ch1.S3.SS4">
  <label>3.4</label><title>Global Pliocene-Recent Ecogroup trends</title>
      <p id="d1e1643">The global proportions of planktonic foraminiferal ecogroups within the
Triton dataset (Fenton and Woodhouse et al., 2021) show that throughout the
time interval studied (5.3–0 Ma), surface mixed layer dwellers without
photosymbionts (orange) proportions remain relatively consistent, making up
<inline-formula><mml:math id="M126" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 10 % of the total global fauna (Fig. 5). From 5.3–3 Ma,
global ecogroup proportions are relatively consistent, where the dominant
forms are thermocline dwellers (cyan) and surface mixed layer dwellers with
photosymbionts (red) (Fig. 5), making up <inline-formula><mml:math id="M127" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 40 % and
<inline-formula><mml:math id="M128" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 35 % of the global fauna, respectively. During this
interval, the proportion of subthermocline dwellers (blue) and high-latitude
forms (yellow) also remain relatively consistent with <inline-formula><mml:math id="M129" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 10 %
and <inline-formula><mml:math id="M130" display="inline"><mml:mrow><mml:mi mathvariant="italic">&lt;</mml:mi><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:math></inline-formula> % of total proportions, respectively. After
<inline-formula><mml:math id="M131" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 3 Ma, both thermocline dwellers and surface mixed layer
dwellers with photosymbionts show a steady decline in global representation
approaching the Recent, making up <inline-formula><mml:math id="M132" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 20 % each in the modern
ocean. At <inline-formula><mml:math id="M133" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 3 Ma, both the subthermocline dwellers and high-
latitude ecogroup start to show increases in their proportions, though this
increase approaching the modern is much greater in the latter group. During
the last 100 kyrs, subthermocline and high- latitude species have constituted
<inline-formula><mml:math id="M134" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 15 % and <inline-formula><mml:math id="M135" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 25 %, respectively (Fig. 5).</p>
</sec>
</sec>
<sec id="Ch1.S4">
  <label>4</label><title>Discussion</title>
      <p id="d1e1729">Few major changes in the assemblage composition are observed through the
study interval, other than the isochronous extinction of <italic>D. altispira</italic>, <italic>D. baroemoenensis</italic>, and <italic>D. globosa</italic> at
<inline-formula><mml:math id="M136" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 3.037 Ma (Fig. 2; 35.50 m b.s.f.), and the influx of the two
species <inline-formula><mml:math id="M137" display="inline"><mml:mi>M</mml:mi></mml:math></inline-formula>. cf. <italic>exilis</italic> and <inline-formula><mml:math id="M138" display="inline"><mml:mi>M</mml:mi></mml:math></inline-formula>. cf. <italic>pertenuis</italic> through <inline-formula><mml:math id="M139" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 3.45–3.36 Ma (42.58–40.56 m b.s.f.),
defined henceforth as the “<italic>Menardella</italic> acme” (Figs. 2 and 6).</p>
<sec id="Ch1.S4.SS1">
  <label>4.1</label><title>Dentoglobigerinid paleoecology</title>
      <p id="d1e1786">The extinction of <italic>D. altispira</italic> is a useful marker in the mid-Pliocene, previously
recorded within the East Equatorial Pacific Ocean (3.46 Ma; Shackleton et
al., 1995; Wade et al., 2011); however, this study and that of Woodhouse et
al. (2021) provide recalibration for this event, which also includes the
co-extinction of <italic>D. baroemoenensis</italic> and <italic>D. globosa</italic>. The co-extinction of the dentoglobigerinids is
significant as Woodhouse et al. (2021) demonstrated that <italic>D. altispira</italic> and <italic>D. baroemoenensis</italic> show unique
phenotypic responses leading up to their termination, despite their shared
phylogenetic and ecological affinity. We, therefore, suggest that all three
species share an ecological habit that ultimately proved inefficient to
mitigate the changing abiotic conditions associated with this critical
period of bipolar cryosphere development (Kleiven et al., 2002; Brierley and
Fedorov, 2010; Cramer et al., 2009, 2011; Willeit et al., 2015; Hayashi et
al., 2020; Westerhold et al., 2020).</p>
      <p id="d1e1804">Studies of extant species suggest a strong positive correlation between
planktonic foraminifera <inline-formula><mml:math id="M140" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">13</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>C and test size, paired with a lack
of a strong negative significant relationship in <inline-formula><mml:math id="M141" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O and test
size, is indicative of species bearing photosymbiotic algae (e.g., Berger et
al., 1978; Bouvier-Soumagnac and Duplessey, 1985; Spero and Williams, 1988,
1989; Spero et al., 1991; Spero, 1992; Spero and Lea, 1993; Ravelo and
Fairbanks, 1995; Norris, 1996; Birch et al., 2013). Our data suggests that
all three species of <italic>Dentoglobigerina</italic> studied here are symbiont-bearing, displaying mean
stable isotope data similarly to the symbiont-bearing surface mixed layer
dwelling <italic>G. ruber</italic> (Figs. 2–4). Moreover, the regression lines for the
ancestor-descendent pair <italic>D. globosa – D. altispira</italic> are remarkably similar, suggesting that the species
share similar stable isotope-test size relationships, despite the speciation
of <italic>D. altispira</italic> occurring <inline-formula><mml:math id="M142" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 20 Myrs prior (Aze et al., 2011; Wade et al.,
2011, 2018). However, the substantially fewer data for <italic>D. globosa</italic> currently   limits the
significance of this observation for this particular species (Fig. 3).</p>
      <p id="d1e1852">The results presented here contribute to the variety of interpretations from
previous studies on the paleoecology of <italic>D. altispira</italic>. Spanning different ocean basins
throughout the species' stratigraphic range they suggest: a shallow-dwelling
(e.g., Keller and Savin, 1985; Vincent et al., 1985; Prentice and Matthews,
1988; Corfield and Cartlidge, 1991; Norris et al., 1993; Hodell and
Vayavananda, 1994; Sosdian and Lear, 2020), deep-dwelling (Opdyke and
Pearson, 1995; Pearson and Shackleton, 1995), or lower mixed layer/upper
thermocline (Zou et al., 2022) ecological niche habit.</p>
      <p id="d1e1858">Woodhouse et al. (2021) suggested that prior to extinction, the <italic>D. altispira</italic> geochemical
signal may signify that this species underwent adaptive ecological niche
migration across multiple depth habitats. Upon further investigation, by
isolating all <italic>D. altispira</italic> specimens present after the migration horizon at
<inline-formula><mml:math id="M143" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 3.061 Ma (Woodhouse et al., 2021), we show that these
specimens do, in fact, display a steeper negative relationship between <inline-formula><mml:math id="M144" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O and test size (Fig. S1), consistent with asymbiosis; however, this
relationship lacks statistical significance. Nevertheless, this observation
lends support to the conclusions of Woodhouse et al. (2021) that this
species underwent niche adaptation prior to extinction.</p>
      <p id="d1e1886">Another plausible scenario may be the existence of indeterminate cryptic
diversity within the <italic>D. altispira</italic> morphospecies complex where multiple ecological
strategies or phylogenetic expressions may be present (e.g., Huber et al.,
1997; Bijma et al., 1998; de Vargas et al., 1999, 2002; Weiner et al., 2012;
Schiebel and Hemleben, 2017; Nirmal et al., 2021; Pearson and Penny, 2021),
and the stepwise changes observed by Woodhouse et al. (2021) may indicate
the systematic loss of “cryptic genotypes” within this  morphospecies
complex. Indeed, Pearson and Penny (2021), hypothesized that dramatic
abundance switches in the Indo-Pacific Warm Pool of ecologically distinct,
alternately coiled populations of <italic>Pulleniatina</italic> morphospecies may signify replacement by
distinct cryptic genotypes, and such coiling switches are noted throughout
the planktonic foraminiferal fossil record (Ericson et al., 1955; Saito et
al., 1975; Bossio et al., 1976; Hallock and Larsen, 1979; Hornibrook, 1982;
Scott et al., 1990; Norris and Nishi, 2001; Winter and Pearson, 2001;
Crundwell and Nelson, 2007; Wade et al., 2011; Pearson and Ezard, 2014;
Crundwell, 2015a, b; Levin et al., 2016; Wallace et al., 2019; Crundwell
and Woodhouse, 2022a, b). Therefore, the range of interpreted
paleoecologies in <italic>D. altispira</italic> may, in fact, be due to the occurrence of distinct cryptic
populations from across the geological record. Irrespectively, the abiotic
conditions at this time appear to have become fatally detrimental to the
entire ecological habit of all three morphospecies of <italic>Dentoglobigerina</italic> analyzed in the EEP,
and subsequently across the entire globe (Shackleton et al., 1995; Chaisson
and Pearson, 1997; Wade et al., 2011; Raffi et al., 2020; Groeneveld et al.,
2021; Woodhouse et al., 2021).</p>

      <?xmltex \floatpos{t}?><fig id="Ch1.F5"><?xmltex \currentcnt{5}?><?xmltex \def\figurename{Figure}?><label>Figure 5</label><caption><p id="d1e1903">The LR04 stack showing benthic foraminiferal <inline-formula><mml:math id="M145" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O
(from Lisiecki and Raymo, 2005) and proportions of macroperforate
planktonic foraminifera occurrences assigned to the ecogroups of Aze et al. (2011), binned to 100 kyrs from 5.3 Ma to the Recent. mPWP <inline-formula><mml:math id="M146" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> mid-Pliocene
Warm Period, SML <inline-formula><mml:math id="M147" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> surface mixed-layer.</p></caption>
          <?xmltex \igopts{width=241.848425pt}?><graphic xlink:href="https://bg.copernicus.org/articles/20/121/2023/bg-20-121-2023-f05.png"/>

        </fig>

      <?xmltex \floatpos{t}?><fig id="Ch1.F6" specific-use="star"><?xmltex \currentcnt{6}?><?xmltex \def\figurename{Figure}?><label>Figure 6</label><caption><p id="d1e1939">Scanning electron micrographs of select species of <italic>Menardella</italic> and pore detail
of penultimate chambers. <bold>(1a)</bold> <italic>M. menardii</italic>, <bold>(1b)</bold> <italic>M. menardii</italic> pore detail, <bold>(2a)</bold> <italic>M. limbata</italic>, <bold>(2b)</bold> <italic>M. limbata</italic> pore detail, <bold>(3a)</bold> <inline-formula><mml:math id="M148" display="inline"><mml:mi>M</mml:mi></mml:math></inline-formula>. cf.
<italic>exilis</italic>, <bold>(3b)</bold> <inline-formula><mml:math id="M149" display="inline"><mml:mi>M</mml:mi></mml:math></inline-formula>. cf. <italic>exilis</italic> pore detail, <bold>(4a)</bold> <inline-formula><mml:math id="M150" display="inline"><mml:mi>M</mml:mi></mml:math></inline-formula>. cf. <italic>pertenuis</italic>, <bold>(4)</bold> <inline-formula><mml:math id="M151" display="inline"><mml:mi>M</mml:mi></mml:math></inline-formula>. cf.<italic> pertenuis</italic> pore detail. Scale bar for images <bold>(1a)</bold>,
<bold>(2a)</bold>, <bold>(3a)</bold>, <bold>(4a)</bold> <inline-formula><mml:math id="M152" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 200 microns, for image <bold>(1b)</bold>, <bold>(2b)</bold>, <bold>(3b)</bold>, <bold>(4b)</bold> <inline-formula><mml:math id="M153" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> 50 <inline-formula><mml:math id="M154" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m.
Specimens 1 and 2 from sample U1338A-5H-CC-11/14 and specimens 3 and 4 from
sample 1338A-5H-7W-76-79.</p></caption>
          <?xmltex \igopts{width=398.338583pt}?><graphic xlink:href="https://bg.copernicus.org/articles/20/121/2023/bg-20-121-2023-f06.png"/>

        </fig>

</sec>
<sec id="Ch1.S4.SS2">
  <label>4.2</label><?xmltex \opttitle{The \textit{Menardella} acme}?><title>The <italic>Menardella</italic> acme</title>
      <p id="d1e2090">The transient influx and co-occurrence of <inline-formula><mml:math id="M155" display="inline"><mml:mi>M</mml:mi></mml:math></inline-formula>. cf. <italic>exilis</italic> and <inline-formula><mml:math id="M156" display="inline"><mml:mrow><mml:mi>M</mml:mi><mml:mo>.</mml:mo></mml:mrow></mml:math></inline-formula> cf. <italic>pertenuis</italic> from <inline-formula><mml:math id="M157" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 3.45–3.36 Ma may indicate a shared ecological affinity between these species
(Fig. 2; Kennett and Srinivasan, 1983; Knappertsbusch, 2016). Furthermore,
this association may suggest that these two similar forms exist within the
same genetic species complex, though further study on internal shell
ontogeny and external morphology would be required to confirm this
hypothesis. Notably, however, Kaneps (1970) and Chaisson (2003)
suggested that Indo-Pacific occurrences of these two species are, in fact,
“aberrant” forms of <italic>Menardella limbata</italic> and <italic>Menardella menardii</italic>, with the <italic>M. exilis-pertenuis</italic> plexus being solely endemic to the
Atlantic basin (Sexton and Norris, 2011).</p>

<?xmltex \floatpos{t}?><table-wrap id="Ch1.T1"><?xmltex \currentcnt{1}?><label>Table 1</label><caption><p id="d1e2136">The number of pores per 2500 <inline-formula><mml:math id="M158" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m<inline-formula><mml:math id="M159" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula> in the penultimate
chamber of select species of <italic>Menardella</italic>.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="2">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1">Species</oasis:entry>
         <oasis:entry colname="col2">Pore density</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2">(per 2500 <inline-formula><mml:math id="M160" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">µ</mml:mi></mml:mrow></mml:math></inline-formula>m<inline-formula><mml:math id="M161" display="inline"><mml:msup><mml:mi/><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:math></inline-formula>)</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1"><italic>M. menardii</italic></oasis:entry>
         <oasis:entry colname="col2">32</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><italic>M. limbata</italic></oasis:entry>
         <oasis:entry colname="col2">27</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M162" display="inline"><mml:mi>M</mml:mi></mml:math></inline-formula>. cf. <italic>exilis</italic></oasis:entry>
         <oasis:entry colname="col2">51</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1"><inline-formula><mml:math id="M163" display="inline"><mml:mi>M</mml:mi></mml:math></inline-formula>. cf. <italic>pertenuis</italic></oasis:entry>
         <oasis:entry colname="col2">49</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d1e2262">Scanning election photomicrographs and pore density analysis of <italic>Menardella</italic> morphospecies
within this study (Fig. 6; Table 1) suggests that the <inline-formula><mml:math id="M164" display="inline"><mml:mi>M</mml:mi></mml:math></inline-formula>. cf. <italic>exilis</italic> and <inline-formula><mml:math id="M165" display="inline"><mml:mi>M</mml:mi></mml:math></inline-formula>. cf. <italic>pertenuis</italic> morphotypes
ascribed to “aberrant” forms may, in fact, be phylogenetically distinct from
both <italic>M. menardii</italic> and <italic>M. limbata,</italic> as well as from the endemic Atlantic <italic>M. exilis-pertenuis</italic> plexus. Where the Atlantic
type specimens exhibit finely perforate tests (Kennett and Srinivasan,
1983), the specimens within this study appear to show test perforation
intermediate between “normally perforate” menardellids such as <italic>M. menardii</italic> and <italic>M. limbata</italic> (Fig. 6), and the “finely perforate” <italic>M. exilis-pertenuis</italic> plexus (Kennett and Srinivasan, 1983;
Chaisson, 2003). Whether all Indo-Pacific occurrences of these morphotypes
(e.g., Brönniman and Resig, 1971; Jenkins and Orr, 1972; Thunell, 1981;
Keigwin, 1982; Thompson, 1982; Chaisson and Leckie, 1993) exhibit similar
test perforation remains to be determined. However, these forms could
represent either: (1) convergent evolution of a geographically isolated
endemic population restricted to the Indo-Pacific triggered by vicariance,
or (2) specimens within the <italic>M. exilis-pertenuis</italic> plexus exhibiting a differential phenotypic
expression of pore density, potentially due to regional differences in
paleoceanography between the Atlantic and Indo-Pacific basins at this time
(Haug et al., 2001). Irrespective of the biological implications, this acme
event may represent a regionally valuable biostratigraphic marker horizon.</p>
</sec>
<sec id="Ch1.S4.SS3">
  <label>4.3</label><title>Pliocene EEP paleoceanography</title>
      <p id="d1e2319">Comparing the assemblage composition of warm and surface dwellers against
cold and deep dwellers, we document a gradual turnover from an assemblage
exhibiting relatively even abundances of these two groups to one of
increasing occupation of cold and deep dwellers from <inline-formula><mml:math id="M166" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 3.08 Ma onwards (36.26 m b.s.f.; Fig. 2). This may reflect regional thermocline
shoaling similar to patterns observed at DSDP Site 84 in the proximal Panama
Basin (Lutz, 2010). Other geological intervals associated with significant
global cooling such as the Eocene-Oligocene transition and late Miocene
cooling exhibit similar patterns of gradual, successive turnover of
warm-water dwellers by cold-water taxa potentially associated with
contractions and expansions in their respective ecospaces (Keller, 1983; Boersma
and Premoli Silva, 1991; Keller et al., 1992; Molina et al., 1993; Wade and
Pearson, 2008; Ezard et al., 2011; Lowery and Fraass, 2019; Lowery et al.,
2020; Boscolo-Galazzo and Crichton et al., 2021; Boscolo-Galazzo et al.,
2022; Woodhouse and Swain et al., 2023).</p>
      <p id="d1e2329">The establishment of the Isthmus of Panama played a key role in Atlantic
Meridional Overturning Circulation intensification by barring Caribbean
inflow from the Atlantic (O'Dea et al., 2016; Hayashi et al., 2020), leading
to a new paleoceanographic state defined by an equatorial Pacific
thermocline exhibiting a high-angle east–west tilt (Fiedler and Talley,
2006; Yang and Wang, 2009; Zhang et al., 2012; Ford et al., 2015). Changes
in the EEP water column structure are compounded within biotic and abiotic
records, where global changes in ice volume, as shown by benthic <inline-formula><mml:math id="M167" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O (Fig. 5), and the formation of the isthmus contributed to the
gradual cooling and shoaling of the thermocline (Ford et al., 2015).
Isochronous records of ice-rafted debris in the North Atlantic and Pacific
infer a substantial change to high-latitude global climate <inline-formula><mml:math id="M168" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 3 Ma (Shackleton et al., 1984; Maslin et al., 1996; Kleiven et al., 2002;
Lawrence et al., 2006). Consequently, the already restricted CAS was likely
subjected to substantial eustatic sea level fluctuations (Chaisson, 2003;
Bartoli et al., 2005; O'Dea et al., 2016), causing cool water within or
below the thermocline to become shallow enough to be mixed by surface winds
(Philander and Fedorov, 2003; Fedorov et al., 2004, 2006; Ford et al.,
2012, 2015). In turn, this contributed to a dramatic increase in regional
upwelling associated with further development of the EEP cold tongue
(Herbert et al., 2010). We suggest that the increasing dominance of cold
and deep dwellers in the EEP (Figs. 2 and 5) are a direct manifestation of
the water column structure changes associated with closure of the CAS and
cryosphere intensification, marking the initiation of transition from the
early Pliocene “El Padre” mean state to one more similar to the modern
ocean (Seki et al., 2012; Ford et al., 2012, 2015).</p>
      <p id="d1e2350">The geochemical fluctuations noted within <italic>G. tumida</italic> from 3.071–3.061 Ma (36.17–35.86 m b.s.f.; Fig. 2) are coeval with the interval assigned to the “phase
transition” by Woodhouse et al. (2021), in which <italic>D. altispira</italic> and <italic>D. baroemoenensis</italic> exhibit   dramatic
fluctuations in size and shape preceding rapid ecological changes. Here, the
<inline-formula><mml:math id="M169" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O signal of <italic>G. tumida</italic> exhibits substantial and rapid changes
up to <inline-formula><mml:math id="M170" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 2.1 ‰, switching from typical
thermocline values to those indicative of the subsurface, and back again,
whereas all other water column <inline-formula><mml:math id="M171" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O value changes are nominal
(Fig. 2).</p>
      <p id="d1e2395">If the fluctuations within the <inline-formula><mml:math id="M172" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O signal of <italic>G. tumida</italic> were related to
fluctuations in its depth habitat, we would expect the inverse pattern to
occur in its <inline-formula><mml:math id="M173" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">13</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>C signature, as <inline-formula><mml:math id="M174" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">13</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>C values
decrease with depth (Cannariato and Ravelo, 1997; Ford et al., 2012; Birch
et al., 2013); however, this is not the case (Fig. 2, Table S2). The maximum
<inline-formula><mml:math id="M175" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O excursion value (<inline-formula><mml:math id="M176" display="inline"><mml:mo lspace="0mm">∼</mml:mo></mml:math></inline-formula> 2.1 ‰) is equivalent to a temperature change of <inline-formula><mml:math id="M177" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 10 <inline-formula><mml:math id="M178" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C,
based on a mid-Pliocene SMOW value of <inline-formula><mml:math id="M179" display="inline"><mml:mo>-</mml:mo></mml:math></inline-formula>0.3 ‰ (Williams et
al., 2005; Medina-Elizalde, Lea and Fantle, 2008; Tindall and Haywood,
2015) and the paleotemperature equations of Kim and O'Neil (1997). Previous
studies from EEP sites show Mg <inline-formula><mml:math id="M180" display="inline"><mml:mo>/</mml:mo></mml:math></inline-formula> Ca-derived thermocline temperature
fluctuations of <inline-formula><mml:math id="M181" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 3 <inline-formula><mml:math id="M182" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C (Site 1241; Steph et al.,
2006) to <inline-formula><mml:math id="M183" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 5 <inline-formula><mml:math id="M184" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C (Sites 848, 849, and 853; Ford et
al., 2012) across the same interval, and modern ocean seasonal deviations
within EEP surface waters are minor at <inline-formula><mml:math id="M185" display="inline"><mml:mo>±</mml:mo></mml:math></inline-formula> 1 <inline-formula><mml:math id="M186" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C (Fiedler,
1992). However, these can be intensified by El Niño conditions by up to
<inline-formula><mml:math id="M187" display="inline"><mml:mo>+</mml:mo></mml:math></inline-formula>3.8 <inline-formula><mml:math id="M188" display="inline"><mml:msup><mml:mi/><mml:mo>∘</mml:mo></mml:msup></mml:math></inline-formula>C (Pérez-Angel and Molnar, 2017).</p>
      <p id="d1e2550">Modern regional evaporation–precipitation balance within the EEP also shows
very little variation, wherein <inline-formula><mml:math id="M189" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O<inline-formula><mml:math id="M190" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">sw</mml:mi></mml:msub></mml:math></inline-formula> values average
0.26 ‰ (Fairbanks et al., 1992), ranging from
<inline-formula><mml:math id="M191" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 0.2 ‰–0.5 ‰ for the entire tropical Pacific
(Ravelo and Hillaire-Marcel, 2007). Factors other than temperature and
salinity (e.g., chlorophyll <inline-formula><mml:math id="M192" display="inline"><mml:mi>a</mml:mi></mml:math></inline-formula>, the lunar cycle) that trigger species-specific
habit changes (Rebotim et al., 2017) could be at least partially responsible
for these dramatic changes in the <italic>G. tumida</italic> <inline-formula><mml:math id="M193" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O records; however, this
species   is known to calcify at the base of the photic zone (Ravelo and
Shackleton, 1995), irrespective of thermocline depth (Ravelo and Fairbanks,
1992; Rincon-Martinez et al., 2011).</p>
      <p id="d1e2602">Despite the present low range in Pacific equatorial <inline-formula><mml:math id="M194" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O<inline-formula><mml:math id="M195" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">sw</mml:mi></mml:msub></mml:math></inline-formula> values, modern Atlantic-Caribbean surface waters record a salinity value
<inline-formula><mml:math id="M196" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 3 ‰ less than the modern EEP (Haug et
al., 2001; Garcia et al., 2006; Schmidt et al., 2016; Öğretmen et
al., 2020), equating to <inline-formula><mml:math id="M197" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 1.5 ‰ lower in
mean <inline-formula><mml:math id="M198" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O<inline-formula><mml:math id="M199" display="inline"><mml:msub><mml:mi/><mml:mi mathvariant="normal">sw</mml:mi></mml:msub></mml:math></inline-formula> values (Ravelo and Hillaire-Marcel, 2007).
This salinity contrast was fully established by <inline-formula><mml:math id="M200" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 4.2 Ma (Haug
et al., 2001), and consistent breaching of Atlantic-Caribbean waters over
the still-submerged isthmus may have occurred as late as 1.9 Ma (Coates and
Obando, 1996; Keller et al., 1989; Schmidt et al., 2016). Therefore, a
breaching event is the most probable cause for the substantial variations in
the <inline-formula><mml:math id="M201" display="inline"><mml:mrow><mml:msup><mml:mi mathvariant="italic">δ</mml:mi><mml:mn mathvariant="normal">18</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>O record of <italic>G. tumida</italic> from 3.071–3.061 Ma, where this apparently
thermocline-restricted (Fig. 2) disturbance may have contributed to
disruption of the <italic>Dentoglobigerina</italic> ecological niche habit at this time (Woodhouse et al.,
2021).</p>
</sec>
<sec id="Ch1.S4.SS4">
  <label>4.4</label><title>Pliocene-Recent global ecological and evolutionary patterns</title>
      <p id="d1e2693">It appears that the faunal turnover documented in the EEP at <inline-formula><mml:math id="M202" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 3.08 Ma (Fig. 5) may represent a critical point in the global development of the
bipolar cryosphere, which typifies the Pleistocene and Holocene (Kleiven et
al., 2002; Mudelsee and Raymo, 2005; Brierly and Fedorov, 2010; Cramer et
al., 2009, 2011; Willeit et al., 2015; Hayashi et al., 2020; Westerhold et
al., 2020). Major Antarctic ice sheet expansion (Shevenell et al., 2004;
Holbourn et al., 2015; Frigola et al., 2018; Westerhold et al., 2020)
following the Miocene Climatic Optimum (<inline-formula><mml:math id="M203" display="inline"><mml:mo lspace="0mm">∼</mml:mo></mml:math></inline-formula> 17–15 Ma; Methner et
al., 2020) initiated global cooling, intensifying meridional gradients
(Gaskell et al., 2022). This triggered unprecedented mean size increases in
low-latitude planktonic foraminifera (Schmidt et al., 2004a, b) and higher
efficiency of the biological carbon pump, promoting greater endemism and
exploitation of new deep-water niches in calcifying plankton (Olsson, 1982;
Scott, 1982; Keller, 1985; Malmgren and Berggren, 1987; Scott et al., 1990;
Norris et al., 1993, 1994, 1996; Norris, 1999, 2000; Rögl, 1999;
Chaisson, 2003; Kucera and Schönfeld, 2007; Ezard et al., 2011;
Crundwell, 2018; Rosenthal et al., 2018; Spezzaferri et al., 2018; Lam and
Leckie, 2020; Boscolo-Galazzo and Crichton et al., 2021; Boscolo-Galazzo et
al., 2022; Woodhouse and Swain et al., 2023).</p>
      <p id="d1e2710">From <inline-formula><mml:math id="M204" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 6.5 Ma, the equatorial Pacific shows meridionally
distinct planktonic foraminiferal faunal provinces that display a turnover
in dominance from Miocene species to more Recent taxa <inline-formula><mml:math id="M205" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 4 Ma
(Chaisson, 1995; Chaisson and Ravelo, 2000) linked with the closure of the
CAS (Haug et al., 2001). Global temperatures record a gradual, stable
decline towards <inline-formula><mml:math id="M206" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 3 Ma (Fig. 5; Westerhold et al., 2020),
after which planktonic foraminiferal morphospecies diversity shows a notable
decline (Aze et al., 2011; Ezard et al., 2011; Fraass et al., 2015; Lowery
et al., 2020), whilst ecogroups (Fig. 5) exhibit the expansion of cold-water
forms coincident with the development and intensification of Northern
Hemisphere ice sheets (Kleiven et al., 2002; Brierly and Fedorov, 2010;
Cramer et al., 2009, 2011; Willeit et al., 2015; Hayashi et al., 2020). The
greater proportion of cold and deep dwellers in the EEP at <inline-formula><mml:math id="M207" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 3.08 Ma (Fig. 2) coincides with global ecogroup patterns (Fig. 5),
signifying the initiation of increasing global dominance of planktonic
foraminiferal species with cold-water affinity, alongside many other
phylogenetic groups (Slater et al., 2017; Steinthorsdottir et al., 2020), as
the world descended into a bipolar icehouse state.</p>
      <p id="d1e2741">Despite the reduction in morphospecies diversity from <inline-formula><mml:math id="M208" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 3 Ma,
the late Cenozoic closure of the Tethyan and Central American Seaways (Crame
and Rosen, 2002; Brierly and Fedorov, 2010; Hamon et al., 2013; Matthews
et al., 2016) may have contributed to the notable rise in diversity through
the Neogene (Aze et al., 2011; Ezard et al., 2011; Peters et al., 2013;
Fraass et al., 2015; Lowery et al., 2020), due to a significantly more
heterogenous ocean structure via longitudinal obstruction of
tropical-subtropical waters by continental reconfiguration, and latitudinal
partitioning caused by the steepening of global meridional temperature
gradients (Haug et al., 2001; Schmidt et al., 2004a, b; Knappertsbusch,
2016; Ford et al., 2022; Friesenhagen, 2022; Gaskell et al., 2022).
Moreover, this intensified, heterogenous icehouse climate may have played a
significant role in shaping the incredible diversity observed within modern
planktonic foraminiferal cryptic genotypes (Darling and Wade, 2008; Aurahs
et al., 2009; Morard et al., 2009, 2013, 2019; Ujiié et al., 2010;
Norris and Hull, 2012; Weiner et al., 2012, 2014; André et al., 2014;
Ujiié and Ishitani, 2016), though further work is required on the
quantification of planktonic foraminiferal cryptic diversity within deep
time (André et al., 2013).</p>
      <p id="d1e2751">It should be noted however, that there is a prominent increase in sampling
of Quaternary high latitudes that is yet to be replicated in deep-time
marine records (Lazarus, 1994; Diepenbroek et al., 2002; Sellén et al.,
2010; O'Regan, 2011; Siccha and Kučera 2017; Waelbroeck et al., 2019;
Renaudie et al., 2020; Fenton and Woodhouse et al., 2021). This is due to
the difficulties encountered in deep-sea scientific drilling of higher
latitudes through the combined impacts of unpredictable and detrimental
oceanographic conditions, and ephemeral sea ice (Barker et al., 1977;
Backman et al., 2006; Lamy et al., 2019; McKay et al., 2019). Consequently,
the substantial increase in cold-water forms observed from <inline-formula><mml:math id="M209" display="inline"><mml:mo>∼</mml:mo></mml:math></inline-formula> 3 Ma to the Recent (Fig. 5) may be at least partly driven by sampling efforts.</p>
</sec>
</sec>
<sec id="Ch1.S5" sec-type="conclusions">
  <label>5</label><title>Conclusions</title>
      <p id="d1e2771">The high-resolution planktonic foraminiferal biotic record at IODP Site
U1338 chronicles important changes in late Cenozoic development of global
climate and the evolutionary history of this microfossil group. The
co-extinction of three species of <italic>Dentoglobigerina</italic> and the acme of <inline-formula><mml:math id="M210" display="inline"><mml:mi>M</mml:mi></mml:math></inline-formula>. cf. <italic>exilis</italic> and <inline-formula><mml:math id="M211" display="inline"><mml:mi>M</mml:mi></mml:math></inline-formula>. cf. <italic>pertenuis</italic> signify
useful regional biostratigraphic markers within the Pacific chronological
framework, where the former appears to be associated with abiotic changes in
water column structure associated with the closure of the Central American
Seaway, and intensification of bipolar cryosphere development. These three
extinct dentoglobigerinids appear to exhibit a symbiotic, mixed layer
ecological niche habit; however, the compilation of results from previous
studies may suggest a high degree of unknown cryptic diversity within
dentoglobigerinid  morphospecies complexes. The abiotic extinction mechanism
is likely signified by the initiation of a critical stage in the formation
of Northern Hemisphere ice sheets and the accompanying changes to global
paleoceanography and water column structure, where cold and deep dwelling
species started to become more dominant across the globe.</p>
      <p id="d1e2797">Globally, planktonic foraminiferal ecological and macroevolutionary patterns
were fundamentally different prior to bipolar ice sheet expansion, and past
intervals with climatic conditions analogous to future-warming scenarios
such as the mid-Pliocene Warm Period require further prospection at multiple
spatiotemporal scales to better predict potential changes in global marine
biodiversity as the Earth continues to shift away from its pre-industrial
state. Furthermore, anthropogenic forcing has the capability to melt modern
continental-scale ice sheets, which hold the potential to dramatically
disrupt global ocean circulation patterns, nutrient distributions, and water
column structure. Based on past changes in such systems, this may signify
impending repercussions for planktonic foraminiferal biodiversity and other
planktonic groups whose survival depends on the vertical structure of the
oceanic water column.</p>
</sec>

      
      </body>
    <back><notes notes-type="dataavailability"><title>Data availability</title>

      <p id="d1e2804">All data included in the Supplement.</p>
  </notes><notes notes-type="sampleavailability"><title>Sample availability</title>

      <p id="d1e2810">All samples available upon request.</p>
  </notes><app-group>
        <supplementary-material position="anchor"><p id="d1e2813">The supplement related to this article is available online at: <inline-supplementary-material xlink:href="https://doi.org/10.5194/bg-20-121-2023-supplement" xlink:title="zip">https://doi.org/10.5194/bg-20-121-2023-supplement</inline-supplementary-material>.</p></supplementary-material>
        </app-group><notes notes-type="authorcontribution"><title>Author contributions</title>

      <p id="d1e2822">AW, FAP, SLJ, RAJ, and RJN generated the
data. All authors contributed to the interpretation of the data. AW
plotted the figures and wrote the R code to perform the statistical analysis. FAP
collected the SEM images. AW and TA contributed to the writing and editing
of the manuscript.</p>
  </notes><notes notes-type="competinginterests"><title>Competing interests</title>

      <p id="d1e2828">The contact author has declared that none of the authors has any competing interests.</p>
  </notes><notes notes-type="disclaimer"><title>Disclaimer</title>

      <p id="d1e2834">Publisher's note: Copernicus Publications remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.</p>
  </notes><ack><title>Acknowledgements</title><p id="d1e2840">This research used samples provided by the International Ocean Discovery
Program (IODP). This work was supported by the Natural Environmental
Research Council (Studentship grants NE/L002574/1 and NE/S007458/1), the
Yorkshire Geological Society Fearnsides Award, and the University of Texas
Institute for Geophysics. We would also like to extend our thanks to Chris
Lowery for comments, the Associate Editor, and the two anonymous reviewers
for their comments and feedback, which greatly helped us to improve the manuscript.</p></ack><notes notes-type="financialsupport"><title>Financial support</title>

      <p id="d1e2845">This research has been supported by the Natural Environment Research Council (grant nos. NE/L002574/1 and NE/S007458/1).</p>
  </notes><notes notes-type="reviewstatement"><title>Review statement</title>

      <p id="d1e2851">This paper was edited by Petr Kuneš and reviewed by two anonymous referees.</p>
  </notes><ref-list>
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