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  <front>
    <journal-meta><journal-id journal-id-type="publisher">BG</journal-id><journal-title-group>
    <journal-title>Biogeosciences</journal-title>
    <abbrev-journal-title abbrev-type="publisher">BG</abbrev-journal-title><abbrev-journal-title abbrev-type="nlm-ta">Biogeosciences</abbrev-journal-title>
  </journal-title-group><issn pub-type="epub">1726-4189</issn><publisher>
    <publisher-name>Copernicus Publications</publisher-name>
    <publisher-loc>Göttingen, Germany</publisher-loc>
  </publisher></journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.5194/bg-23-5607-2026</article-id><title-group><article-title>AngleCam V2: Predicting leaf inclination angles across taxa from daytime and nighttime photos</article-title><alt-title>AngleCam V2: Leaf angles from photos</alt-title>
      </title-group>
      <contrib-group>
        <contrib contrib-type="author" corresp="yes" rid="aff1">
          <name><surname>Kremer</surname><given-names>Luis</given-names></name>
          <email>luis.kremer@geosense.uni-freiburg.de</email>
        <ext-link>https://orcid.org/0009-0007-1613-5793</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff2">
          <name><surname>Pisek</surname><given-names>Jan</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3 aff4">
          <name><surname>Richter</surname><given-names>Ronny</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff5">
          <name><surname>Frey</surname><given-names>Julian</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-7895-702X</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Lusk</surname><given-names>Daniel</given-names></name>
          
        <ext-link>https://orcid.org/0009-0002-9745-5011</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff6">
          <name><surname>Werner</surname><given-names>Christiane</given-names></name>
          
        <ext-link>https://orcid.org/0000-0002-7676-9057</ext-link></contrib>
        <contrib contrib-type="author" corresp="no" rid="aff3 aff4">
          <name><surname>Wirth</surname><given-names>Christian</given-names></name>
          
        </contrib>
        <contrib contrib-type="author" corresp="no" rid="aff1">
          <name><surname>Kattenborn</surname><given-names>Teja</given-names></name>
          
        <ext-link>https://orcid.org/0000-0001-7381-3828</ext-link></contrib>
        <aff id="aff1"><label>1</label><institution>Chair of Sensor-based Geoinformatics (geosense), University of Freiburg, Freiburg, Germany</institution>
        </aff>
        <aff id="aff2"><label>2</label><institution>Tartu Observatory, University of Tartu, Tõravere, Estonia</institution>
        </aff>
        <aff id="aff3"><label>3</label><institution>German Centre for Integrative Biodiversity Research (iDiv), Halle-Jena-Leipzig, Leipzig, Germany</institution>
        </aff>
        <aff id="aff4"><label>4</label><institution>Systematic Botany and Functional Biodiversity, Institute of Biology, Leipzig University, Leipzig, Germany</institution>
        </aff>
        <aff id="aff5"><label>5</label><institution>Chair of Forest Growth and Dendroecology, University of Freiburg,  Freiburg, Germany</institution>
        </aff>
        <aff id="aff6"><label>6</label><institution>Chair of Ecosystem Physiology, University of Freiburg,  Freiburg, Germany</institution>
        </aff>
      </contrib-group>
      <author-notes><corresp id="corr1">Luis Kremer (luis.kremer@geosense.uni-freiburg.de)</corresp></author-notes><pub-date><day>14</day><month>August</month><year>2026</year></pub-date>
      
      <volume>23</volume>
      <issue>15</issue>
      <fpage>5607</fpage><lpage>5624</lpage>
      <history>
        <date date-type="received"><day>21</day><month>October</month><year>2025</year></date>
           <date date-type="rev-request"><day>18</day><month>November</month><year>2025</year></date>
           <date date-type="rev-recd"><day>7</day><month>April</month><year>2026</year></date>
           <date date-type="accepted"><day>8</day><month>June</month><year>2026</year></date>
      </history>
      <permissions>
        <copyright-statement>Copyright: © 2026 Luis Kremer et al.</copyright-statement>
        <copyright-year>2026</copyright-year>
      <license license-type="open-access"><license-p>This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit <ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">https://creativecommons.org/licenses/by/4.0/</ext-link></license-p></license></permissions><self-uri xlink:href="https://bg.copernicus.org/articles/23/5607/2026/bg-23-5607-2026.html">This article is available from https://bg.copernicus.org/articles/23/5607/2026/bg-23-5607-2026.html</self-uri><self-uri xlink:href="https://bg.copernicus.org/articles/23/5607/2026/bg-23-5607-2026.pdf">The full text article is available as a PDF file from https://bg.copernicus.org/articles/23/5607/2026/bg-23-5607-2026.pdf</self-uri>
      <abstract><title>Abstract</title>

      <p id="d2e180">Understanding how plants capture light and maintain their energy balance is crucial for predicting how ecosystems respond to environmental changes. By monitoring leaf inclination angle distributions (LIADs), we can gain insights into plant behavior that directly influences ecosystem functioning. LIADs affect radiative transfer processes and reflectance signals, which are essential components of satellite-based vegetation monitoring. Despite their importance, scalable methods for continuously observing these dynamics across different plant species throughout day-night cycles are limited.</p>

      <p id="d2e183">We present AngleCam V2, a deep learning model that estimates LIADs from both RGB and near-infrared (NIR) night-vision imagery. We compiled a dataset of over 4500 images across 200 globally distributed species to facilitate generalization across taxa. To address the lack of labeled NIR data, a training strategy was developed that uses pseudo-NIR imagery derived from daytime RGB images. The model is based on a vision transformer architecture with mixed-modality training incorporating RGB, grayscale, and pseudo-NIR images.</p>

      <p id="d2e186">AngleCam V2 achieved substantial improvements in generalization compared to AngleCam V1 (<inline-formula><mml:math id="M1" display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.62</mml:mn></mml:mrow></mml:math></inline-formula> vs. 0.12 on the same holdout dataset). Phylogenetic analysis across 100 genera revealed no systematic taxonomic bias in prediction errors. Testing against leaf angle dynamics from multitemporal terrestrial laser scanning confirmed the model's ability to track diurnal leaf movements (<inline-formula><mml:math id="M2" display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.61</mml:mn></mml:mrow></mml:math></inline-formula>–0.75) with a nighttime RMSE of 3.1–<inline-formula><mml:math id="M3" display="inline"><mml:mrow><mml:mn mathvariant="normal">3.6</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula> (compared to daytime RMSEs of 3.5 and <inline-formula><mml:math id="M4" display="inline"><mml:mrow><mml:mn mathvariant="normal">7.6</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula>, respectively). Furthermore, the model successfully detected water limitation-induced changes over a 14-d monitoring period.</p>

      <p id="d2e239">This method enables continuous monitoring of leaf angle dynamics using conventional cameras, enabling applications in ecosystem monitoring networks, plant stress detection, interpreting satellite vegetation signals, and citizen science platforms for global-scale understanding of plant structural responses.</p>
  </abstract>
    </article-meta>
  </front>
<body>
      

<sec id="Ch1.S1" sec-type="intro">
  <label>1</label><title>Introduction</title>
      <p id="d2e251">Some plants hold their leaves horizontally like umbrellas, while others keep them upright like rows of solar panels. This difference in orientation, ranging from flat to erect, is described as the vertical leaf angle. Plants have evolved a wide variability of vertical leaf angle orientations across species, growth forms, and geographic regions <xref ref-type="bibr" rid="bib1.bibx57" id="paren.1"/>.</p>
      <p id="d2e257">Even within a single plant, leaf angles vary to optimize resource use. Upright upper leaves facilitate light transmission, while horizontal lower leaves maximize light absorption <xref ref-type="bibr" rid="bib1.bibx49" id="paren.2"/>. This variation, which has been studied since Darwin <xref ref-type="bibr" rid="bib1.bibx11" id="paren.3"/>, regulates light uptake, competition, microclimates, and canopy productivity <xref ref-type="bibr" rid="bib1.bibx25 bib1.bibx46 bib1.bibx49" id="paren.4"/>.</p>
      <p id="d2e269">The vertical orientation of a leaf is defined by its surface angle, which ranges from <inline-formula><mml:math id="M5" display="inline"><mml:mrow><mml:mn mathvariant="normal">0</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula> (entirely horizontal) to <inline-formula><mml:math id="M6" display="inline"><mml:mrow><mml:mn mathvariant="normal">90</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula> (entirely vertical). The variability of these angles within a canopy is referred to as the leaf inclination angle distribution (LIAD). LIADs are not static, as plants adjust leaf angles through active and passive processes, including diurnal movements, phenological changes, and water-stress-induced drooping. These responses are influenced by light, temperature, competition, and plant water status <xref ref-type="bibr" rid="bib1.bibx18 bib1.bibx49 bib1.bibx1 bib1.bibx56" id="paren.5"/>. Rapid changes in leaf angles can indicate stress, such as heat or photoinhibition, and regulate canopy energy balances <xref ref-type="bibr" rid="bib1.bibx15 bib1.bibx73 bib1.bibx32 bib1.bibx74 bib1.bibx38 bib1.bibx66" id="paren.6"/>. LIAD variability also significantly influences canopy reflectance, making it critical for global vegetation monitoring and interpreting satellite-based signals <xref ref-type="bibr" rid="bib1.bibx33 bib1.bibx12 bib1.bibx26 bib1.bibx8" id="paren.7"/>.</p>
      <p id="d2e301">Despite their importance, few scalable techniques exist for automatically tracking dynamic changes in LIADs <xref ref-type="bibr" rid="bib1.bibx78" id="paren.8"/>. While inertial measurement units (IMUs) can track individual leaf movements <xref ref-type="bibr" rid="bib1.bibx18" id="paren.9"/>, they are not scalable to entire canopies. 3D point cloud-based approaches using photogrammetry <xref ref-type="bibr" rid="bib1.bibx58" id="paren.10"/>, terrestrial laser scanning <xref ref-type="bibr" rid="bib1.bibx2 bib1.bibx80 bib1.bibx69 bib1.bibx48" id="paren.11"/>, or stereo vision <xref ref-type="bibr" rid="bib1.bibx6 bib1.bibx7 bib1.bibx47" id="paren.12"/> show promise but require specialized hardware and calibration, limiting their usability in field conditions.</p>
      <p id="d2e320">Yet humans can easily perceive differences in leaf angles from real-life observations or photographs <xref ref-type="bibr" rid="bib1.bibx53 bib1.bibx81" id="paren.13"/>. Automating this task using computer vision techniques led to the development of AngleCam <xref ref-type="bibr" rid="bib1.bibx32 bib1.bibx33" id="paren.14"/>, a deep learning model designed to estimate LIADs from single, horizontally oriented RGB photographs or video frames. AngleCam was trained on approximately 2500 images and corresponding leaf inclination angle distributions, which were derived from annotating individual leaves in the image frames, and compared against independent TLS-derived LIADs across 25 plant species. The applicability and responsiveness of AngleCam were demonstrated through long-term time series in which predicted leaf inclination angle distributions exhibited plausible dynamics in response to environmental drivers, including radiation, temperature, and soil humidity at multiple sites <xref ref-type="bibr" rid="bib1.bibx32 bib1.bibx33" id="paren.15"/>. Despite these potentials, the original AngleCam (V1) remains limited to daylight observations and has restricted generalizability due to the limited diversity of its training dataset.</p>
      <p id="d2e332">Here, we present AngleCam V2, which addresses these limitations through three major advancements: (1) we expanded the training and validation dataset to over 4500 images across 200 species, ensuring robust generalization across diverse growth forms and biomes. (2) we integrated a self-supervised vision transformer (DINOv2) to enhance feature extraction and robustness to varied scene conditions. (3) we developed a training strategy that combines grayscale and pseudo-NIR transformations to leverage existing RGB labels and minimize manual effort for NIR annotation. This approach enables the model to process both RGB and NIR night-vision imagery, supporting continuous 24-h monitoring of leaf movements.</p>
      <p id="d2e335">In this study, we validate the model on a holdout dataset and assess its generalization across 100 genera. Additionally, we test the approach in controlled indoor experiments, which include a comparison with multitemporal terrestrial laser scanning (TLS) and monitoring of a plant under water limitation. The enhanced generalization and temporal capabilities could make this approach a promising candidate for ecosystem monitoring networks and citizen science applications, with potential for contributing to global-scale understanding of leaf angle patterns and their environmental drivers.</p>
</sec>
<sec id="Ch1.S2">
  <label>2</label><title>Materials and Methods</title>
<sec id="Ch1.S2.SS1">
  <label>2.1</label><title>AngleCam model development</title>
<sec id="Ch1.S2.SS1.SSS1">
  <label>2.1.1</label><title>RGB image data across taxa and geographic regions</title>
      <p id="d2e360">The dataset for model training and validation grew from 2680 to 4795 images, enhancing taxonomic and morphological diversity with AngleCam V2 (Fig. <xref ref-type="fig" rid="F1"/>). Unlike AngleCam V1, which relied solely on two datasets from 2021, AngleCam V2 includes these plus three additional collections (Table <xref ref-type="table" rid="T1"/>). The first is a diverse set from the Leipzig area, featuring 100 species from various environments. The second set consists of image time series taken within the project at the Canopy Crane research platform (Leipzig Canopy Crane [LCC]) of the German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig. This site covers a Leipzig floodplain forest, a structurally complex hardwood forest dominated by tree species such as European ash (<italic>Fraxinus excelsior</italic> L.), English oak (<italic>Quercus robur</italic> L.), Sycamore maple (<italic>Acer pseudoplatanus</italic> L.), European hornbeam (<italic>Carpinus betulus</italic> L.), and small-leaved lime (<italic>Tilia cordata</italic> Mill) <xref ref-type="bibr" rid="bib1.bibx61" id="paren.16"><named-content content-type="pre">see</named-content><named-content content-type="post">for details</named-content></xref>. Together, both datasets provided a total of 102 different species. While <italic>Tilia cordata</italic> and <italic>Acer pseudoplatanus</italic> represented approximately 50 <inline-formula><mml:math id="M7" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">%</mml:mi></mml:mrow></mml:math></inline-formula> of the dataset, this reflects extensive temporal sampling from continuous monitoring at the Leipzig Canopy Crane, capturing a large variability of LIADs of these species across diverse environmental conditions and seasonal phenology rather than simple taxonomic overrepresentation (Fig. <xref ref-type="fig" rid="F1"/>). These image series were captured using TLC-200 Pro timelapse cameras (Brinno Inc., Taipei, Taiwan) in high-dynamic range (HDR) mode <xref ref-type="bibr" rid="bib1.bibx32" id="paren.17"><named-content content-type="pre">further details see</named-content></xref>.</p>

      <fig id="F1" specific-use="star"><label>Figure 1</label><caption><p id="d2e414">Species distribution in AngleCam (V1 &amp; V2) training datasets. Rank-abundance curves showing the number of images per species (left <inline-formula><mml:math id="M8" display="inline"><mml:mi>y</mml:mi></mml:math></inline-formula> axis, log scale) and cumulative dataset coverage (right <inline-formula><mml:math id="M9" display="inline"><mml:mi>y</mml:mi></mml:math></inline-formula> axis) for Version 1 (left panel, 2680 images across 102 species) and Version 2 (right panel, 4795 images across 200 species). The curves illustrate how images are distributed across species in each dataset, with reference lines indicating the number of species required to achieve 50 <inline-formula><mml:math id="M10" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">%</mml:mi></mml:mrow></mml:math></inline-formula>, 75 <inline-formula><mml:math id="M11" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">%</mml:mi></mml:mrow></mml:math></inline-formula>, and 95 <inline-formula><mml:math id="M12" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">%</mml:mi></mml:mrow></mml:math></inline-formula> of total dataset coverage.</p></caption>
            <graphic xlink:href="https://bg.copernicus.org/articles/23/5607/2026/bg-23-5607-2026-f01.png"/>

          </fig>

<table-wrap id="T1" specific-use="star"><label>Table 1</label><caption><p id="d2e464">Datasets used for AngleCam V1 and V2 model training and validation.</p></caption><oasis:table frame="topbot"><oasis:tgroup cols="6">
     <oasis:colspec colnum="1" colname="col1" align="left"/>
     <oasis:colspec colnum="2" colname="col2" align="right"/>
     <oasis:colspec colnum="3" colname="col3" align="right"/>
     <oasis:colspec colnum="4" colname="col4" align="right"/>
     <oasis:colspec colnum="5" colname="col5" align="left"/>
     <oasis:colspec colnum="6" colname="col6" align="left"/>
     <oasis:thead>
       <oasis:row>
         <oasis:entry colname="col1">Dataset</oasis:entry>
         <oasis:entry colname="col2">Year(s)</oasis:entry>
         <oasis:entry colname="col3">Species Count</oasis:entry>
         <oasis:entry colname="col4">Image Count</oasis:entry>
         <oasis:entry colname="col5">Description</oasis:entry>
         <oasis:entry colname="col6">AngleCam</oasis:entry>
       </oasis:row>
       <oasis:row rowsep="1">
         <oasis:entry colname="col1"/>
         <oasis:entry colname="col2"/>
         <oasis:entry colname="col3"/>
         <oasis:entry colname="col4"/>
         <oasis:entry colname="col5"/>
         <oasis:entry colname="col6">Version</oasis:entry>
       </oasis:row>
     </oasis:thead>
     <oasis:tbody>
       <oasis:row>
         <oasis:entry colname="col1">Area of Leipzig</oasis:entry>
         <oasis:entry colname="col2">2021</oasis:entry>
         <oasis:entry colname="col3">100</oasis:entry>
         <oasis:entry colname="col4">1237</oasis:entry>
         <oasis:entry colname="col5">Natural/semi-natural areas, parks, gardens, indoor plants</oasis:entry>
         <oasis:entry colname="col6">V1 &amp; V2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Leipzig Canopy Crane (LCC)</oasis:entry>
         <oasis:entry colname="col2">2021</oasis:entry>
         <oasis:entry colname="col3">2</oasis:entry>
         <oasis:entry colname="col4">1431</oasis:entry>
         <oasis:entry colname="col5">Floodplain forest, a hardwood ecosystem</oasis:entry>
         <oasis:entry colname="col6">V1 &amp; V2</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">MyDiv experiment</oasis:entry>
         <oasis:entry colname="col2">2022</oasis:entry>
         <oasis:entry colname="col3">9</oasis:entry>
         <oasis:entry colname="col4">1422</oasis:entry>
         <oasis:entry colname="col5">Tree monocultures</oasis:entry>
         <oasis:entry colname="col6">V2 only</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Global Collection</oasis:entry>
         <oasis:entry colname="col2">2012–2022</oasis:entry>
         <oasis:entry colname="col3"><inline-formula><mml:math id="M13" display="inline"><mml:mrow><mml:mo>&gt;</mml:mo><mml:mn mathvariant="normal">100</mml:mn></mml:mrow></mml:math></inline-formula></oasis:entry>
         <oasis:entry colname="col4">676</oasis:entry>
         <oasis:entry colname="col5">Botanical gardens, arboreta worldwide</oasis:entry>
         <oasis:entry colname="col6">V2 only</oasis:entry>
       </oasis:row>
       <oasis:row>
         <oasis:entry colname="col1">Indoor experiments</oasis:entry>
         <oasis:entry colname="col2">2024–2025</oasis:entry>
         <oasis:entry colname="col3">3</oasis:entry>
         <oasis:entry colname="col4">35</oasis:entry>
         <oasis:entry colname="col5">Controlled indoor plant monitoring</oasis:entry>
         <oasis:entry colname="col6">V2 only</oasis:entry>
       </oasis:row>
     </oasis:tbody>
   </oasis:tgroup></oasis:table></table-wrap>

      <p id="d2e649">With the new version of AngleCam, we have expanded the training and validation dataset to make the model more robust against various leaf shapes and illumination conditions. The entire dataset now includes three additional datasets in addition to the two from the first version:</p>
      <p id="d2e652"><list list-type="bullet">
              <list-item>

      <p id="d2e657">Image series taken within the field experiment MyDiv <xref ref-type="bibr" rid="bib1.bibx16" id="paren.18"><named-content content-type="pre">Mycorrhiza in tree Diversity effects on ecosystem functioning;</named-content></xref>.</p>
              </list-item>
              <list-item>

      <p id="d2e668">A globally sourced collection of over 600 tree and shrub samples representing more than 100 species from diverse climates and biomes.</p>
              </list-item>
              <list-item>

      <p id="d2e674">An independent test dataset with image series of three indoor plant species, including two validated against terrestrial laser scans (described in Sects. <xref ref-type="sec" rid="Ch1.S2.SS3"/> and <xref ref-type="sec" rid="Ch1.S2.SS4"/>).</p>
              </list-item>
            </list></p>
      <p id="d2e683">The MyDiv experiment, conducted at the Bad Lauchstädt Experimental Research Station of the Helmholtz Centre for Environmental Research – UFZ in Saxony-Anhalt, Germany, is structured to investigate the effects of tree diversity on ecosystem functions <xref ref-type="bibr" rid="bib1.bibx16" id="paren.19"/>. The data for this analysis specifically used measurements from monoculture plots of nine temperate deciduous tree species: <italic>Acer pseudoplatanus</italic> L., <italic>Aesculus hippocastanum</italic> L., <italic>Fraxinus excelsior</italic> L., <italic>Sorbus aucuparia</italic> L., <italic>Betula pendula</italic> R., <italic>Carpinus betulus</italic> L., <italic>Fagus sylvatica</italic> L., <italic>Quercus petraea</italic> (Matt.) Liebl., and <italic>Tilia platyphyllos</italic> Scop. For each of these nine species, two time-lapse cameras were deployed in the plot center of the respective monoculture plots. The cameras were positioned to capture a horizontal field of view of branches from two individuals located centrally within the plot. The installation height corresponded to the upper third of the tree crowns. Time series images were collected at 5-min intervals during the primary vegetation period from 6 June to 5 October 2022 <xref ref-type="bibr" rid="bib1.bibx33" id="paren.20"><named-content content-type="pre">further details see</named-content></xref>.</p>
      <p id="d2e722">To improve the model's robustness across genera and scene conditions, we integrated a comprehensive dataset that includes 676 horizontal plant photographs representing over 100 distinct species across a broad taxonomic and ecological spectrum. The observations were collected from botanical gardens and arboreta worldwide, including locations in Europe (Czech Republic, Estonia, France, Italy, Netherlands, Portugal, Spain, Sweden, and the UK), as well as in the USA, Israel, and Australia. This collection covers a variety of biomes and climates, ranging from Mediterranean and temperate to subtropical regions. For several species and genera, such as <italic>Eucalyptus</italic>, <italic>Quercus</italic>, and <italic>Betula</italic>, multiple samples from diverse locations were collected, resulting in a dataset that includes both intra- and interspecific variation under varied environmental conditions.</p>
</sec>
<sec id="Ch1.S2.SS1.SSS2">
  <label>2.1.2</label><title>Labeling RGB images with leaf inclination angle distributions</title>
      <p id="d2e743">Deep learning models benefit from large, well-annotated training datasets. To generate leaf angle references efficiently, we used visual estimation based on RGB images. Previous studies obtained estimates of leaf inclination angle distributions by measuring the vertical angle of leaves that are oriented perpendicular to the camera's line of sight <xref ref-type="bibr" rid="bib1.bibx53 bib1.bibx65" id="paren.21"/>. Multiple measurements of individual leaves can be summarized as a leaf inclination angle distribution. However, these strict geometric requirements limit the number of usable samples per image, the robustness of a leaf inclination angle distribution, and pose challenges for species with complex or curled leaf forms <xref ref-type="bibr" rid="bib1.bibx48" id="paren.22"/>. Here, we overcome these limitations by estimating the average leaf inclination of whole leaf surfaces through visual interpretation of their apparent angle from horizontal in RGB images. This process relied solely on visual estimation, without additional geometric cues. Only clearly visible leaves were annotated, while occluded leaves were excluded. For curled or non-planar leaves, annotators estimated the average inclination of the entire leaf surface. This approach was previously applied successfully for AngleCam V1 <xref ref-type="bibr" rid="bib1.bibx32" id="paren.23"/>.</p>
      <p id="d2e755">We obtained a LIAD for each reference image by sampling the average leaf surface inclinations of 20 leaves. This sample size was chosen to obtain a representative intra-image leaf angle variability, as well as a large image dataset across species and scene conditions. We followed the approach from AngleCam V1, where this sampling strategy was validated by terrestrial laser scanning (<inline-formula><mml:math id="M14" display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.74</mml:mn></mml:mrow></mml:math></inline-formula>) <xref ref-type="bibr" rid="bib1.bibx32" id="paren.24"/>. For each image, we placed an evenly spaced grid of points and selected the leaf closest to each point for annotation. This method ensures spatial balance across the field of view, reduces bias toward prominent leaves, and samples leaves throughout the vertical gradient of the visible canopy seen from the horizontal camera angle.</p>
      <p id="d2e776">Although this approach enables efficient annotation, it may introduce observer-related uncertainty. To reduce sensitivity to label uncertainty, individual discrete angle measurements were not used directly as training targets. Instead, the 20 leaf samples were converted into probability distributions across the full 0–<inline-formula><mml:math id="M15" display="inline"><mml:mrow><mml:mn mathvariant="normal">90</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula> leaf angle range. The two-parameter beta distribution was employed, as it is well-suited to model continuous gradients of leaf inclination angle distribution shapes, ranging from strongly horizontal (planophile) to uniform, spherical, or strongly vertical (erectophile) forms <xref ref-type="bibr" rid="bib1.bibx21" id="paren.25"/>. Beta distribution fitting was performed in Python using the <monospace>scipy.stats</monospace> module (v1.13.0), with parameters <inline-formula><mml:math id="M16" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:mi mathvariant="italic">α</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="italic">β</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> estimated by maximum likelihood.</p>
      <p id="d2e811">Rather than directly predicting the <inline-formula><mml:math id="M17" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:mi mathvariant="italic">α</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="italic">β</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> parameters of a beta distribution, the model was trained to predict the entire probability density function (PDF) across the 0–<inline-formula><mml:math id="M18" display="inline"><mml:mrow><mml:mn mathvariant="normal">90</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula> range at <inline-formula><mml:math id="M19" display="inline"><mml:mrow><mml:mn mathvariant="normal">2</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula> intervals, since the underlying LIAD may differ from an idealized beta distribution in some cases <xref ref-type="bibr" rid="bib1.bibx32" id="paren.26"/>. To further mitigate the impact of potential annotation bias and enhance generalization, the fitted <inline-formula><mml:math id="M20" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:mi mathvariant="italic">α</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="italic">β</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> values of the reference LIADs were augmented, generating 50 synthetic variants for each image by sampling <inline-formula><mml:math id="M21" display="inline"><mml:mrow><mml:mo>(</mml:mo><mml:mi mathvariant="italic">α</mml:mi><mml:mo>,</mml:mo><mml:mi mathvariant="italic">β</mml:mi><mml:mo>)</mml:mo></mml:mrow></mml:math></inline-formula> within <inline-formula><mml:math id="M22" display="inline"><mml:mrow><mml:mo>±</mml:mo><mml:mn mathvariant="normal">20</mml:mn><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mrow class="unit"><mml:mi mathvariant="normal">%</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> of the standard deviation of the maximum likelihood estimates. This data augmentation increases the model's robustness to plausible measurement variations. Additionally, by training on over 3500 images, random interpretation errors are expected to be mitigated during optimization rather than systematically propagating into the learned signal <xref ref-type="bibr" rid="bib1.bibx63" id="paren.27"/>. The robustness of this labeling approach was verified by evaluating the model against independent leaf angle measurements derived from terrestrial laser scanning (see Sect. <xref ref-type="sec" rid="Ch1.S2.SS3"/>).</p>
</sec>
<sec id="Ch1.S2.SS1.SSS3">
  <label>2.1.3</label><title>Generating training data on pseudo-NIR images</title>
      <p id="d2e913">While AngleCam V1 was trained exclusively on RGB images, we specifically adapted AngleCam V2 to also process NIR images acquired under nighttime conditions, enabling fully continuous monitoring of leaf angle dynamics.</p>
      <p id="d2e916">Night-vision images are captured by cameras with infrared light-emitting diodes (NIR-LEDs) that emit near-infrared radiation (850–940 <inline-formula><mml:math id="M23" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">nm</mml:mi></mml:mrow></mml:math></inline-formula>). The camera sensor records reflected NIR light, resulting in grayscale images that represent backscatter intensity <xref ref-type="bibr" rid="bib1.bibx71" id="paren.28"/>. These images differ from daylight RGB images in several ways: the spectrum varies (e.g. vegetation appears bright in NIR), the effective range of the NIR LED is around 9 <inline-formula><mml:math id="M24" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula>, and illumination decreases with the square of the distance from the light source <xref ref-type="bibr" rid="bib1.bibx52" id="paren.29"/>.</p>
      <p id="d2e941">These fundamental differences posed a challenge, as a model trained only on RGB images would perform poorly on NIR images due to modality mismatch. Given that a large dataset of labeled RGB data was already available (Table <xref ref-type="table" rid="T1"/>), we decided not to invest the same workload to create an equally sized dataset of labeled NIR imagery. Instead, we developed an approach to create synthetic NIR imagery from the already extensively labeled RGB data.</p>
      <p id="d2e946">Firstly, we randomly converted 50 <inline-formula><mml:math id="M25" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">%</mml:mi></mml:mrow></mml:math></inline-formula> of the RGB in the training dataset to grayscale using luminance weighting (<inline-formula><mml:math id="M26" display="inline"><mml:mrow><mml:mn mathvariant="normal">0.299</mml:mn><mml:mi mathvariant="normal">R</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">0.587</mml:mn><mml:mi mathvariant="normal">G</mml:mi><mml:mo>+</mml:mo><mml:mn mathvariant="normal">0.114</mml:mn><mml:mi mathvariant="normal">B</mml:mi></mml:mrow></mml:math></inline-formula>) to reduce reliance on color. Secondly, we randomly added a distance-based dimming to 50 <inline-formula><mml:math id="M27" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">%</mml:mi></mml:mrow></mml:math></inline-formula> of the grayscale images (pseudo-NIR images) to mimic the limited range of the NIR illuminator and the corresponding brightness falloff with distance (Fig. <xref ref-type="fig" rid="F2"/>). For this, we scaled the pixel intensities of each grayscale image according to the pixel-wise distances estimated from computer vision – derived depth maps (Depth Anything V2; see details below). The final transformation was defined as:

                  <disp-formula id="Ch1.E1" content-type="numbered"><label>1</label><mml:math id="M28" display="block"><mml:mstyle displaystyle="true" class="stylechange"/><mml:mrow><mml:mstyle class="stylechange" displaystyle="true"/><mml:msub><mml:mi>I</mml:mi><mml:mtext>NIR</mml:mtext></mml:msub><mml:mspace linebreak="nobreak" width="0.125em"/><mml:mo>=</mml:mo><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msub><mml:mi>I</mml:mi><mml:mtext>gray</mml:mtext></mml:msub><mml:mo>⋅</mml:mo><mml:msup><mml:mfenced open="(" close=")"><mml:mstyle displaystyle="true"><mml:mfrac style="display"><mml:mrow><mml:msub><mml:mi>d</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow><mml:mrow><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi>d</mml:mi><mml:mo>+</mml:mo><mml:mi mathvariant="italic">ε</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/></mml:mrow></mml:mfrac></mml:mstyle></mml:mfenced><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>,</mml:mo><mml:mspace width="2em" linebreak="nobreak"/><mml:msub><mml:mi>d</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1</mml:mn><mml:mo>,</mml:mo><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mi mathvariant="italic">ε</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">2</mml:mn><mml:mo>.</mml:mo></mml:mrow></mml:math></disp-formula>

            where <inline-formula><mml:math id="M29" display="inline"><mml:mrow><mml:msub><mml:mi>I</mml:mi><mml:mtext>gray</mml:mtext></mml:msub></mml:mrow></mml:math></inline-formula> is the grayscale image, <inline-formula><mml:math id="M30" display="inline"><mml:mi>d</mml:mi></mml:math></inline-formula> is the per-pixel depth (in meters), and <inline-formula><mml:math id="M31" display="inline"><mml:mrow><mml:msub><mml:mi>d</mml:mi><mml:mn mathvariant="normal">0</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> is a normalization distance. We set <inline-formula><mml:math id="M32" display="inline"><mml:mrow><mml:mi mathvariant="italic">ε</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula> to ensure numerical stability for minimal depths and to slightly compress the distance attenuation. This yields pseudo-NIR images that appear brighter and less contrast-extreme (Fig. <xref ref-type="fig" rid="F2"/>).</p>

      <fig id="F2" specific-use="star"><label>Figure 2</label><caption><p id="d2e1105">Pseudo-NIR image generation pipeline. The transformation from RGB to pseudo-NIR involves several steps: <bold>(a)</bold> RGB original image, <bold>(b)</bold> conversion to grayscale, <bold>(c)</bold> depth map estimation using Depth Anything V2 (closer objects to the camera appear brighter), and <bold>(d)</bold> pseudo-NIR image generation by scaling the intensity of the grayscale image with the corresponding depth map, simulating NIR-LED illumination falloff. <bold>(e)</bold> Actual NIR image captured at nighttime of the same scene; see Fig. S1 in the Supplement for further examples.</p></caption>
            <graphic xlink:href="https://bg.copernicus.org/articles/23/5607/2026/bg-23-5607-2026-f02.jpg"/>

          </fig>

      <p id="d2e1129">The depth maps used to simulate the NIR imagery were generated using Depth Anything V2, a state-of-the-art monocular depth estimation model <xref ref-type="bibr" rid="bib1.bibx77" id="paren.30"/>. We used the large model variant, fine-tuned for metric depth estimation on the Virtual KITTI 2 dataset <xref ref-type="bibr" rid="bib1.bibx10" id="paren.31"/>. To align predicted depth values with the operational range of our NIR camera system, we constrained maximum depth predictions to 9 <inline-formula><mml:math id="M33" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula>.</p>
</sec>
<sec id="Ch1.S2.SS1.SSS4">
  <label>2.1.4</label><title>Model architecture and training</title>
      <p id="d2e1154">For AngleCam V2, we revised the architecture by replacing the EfficientNet-B7 backbone with the self-supervised DINOv2 ViT-S/14 model as the feature extractor <xref ref-type="bibr" rid="bib1.bibx50" id="paren.32"/>. Vision transformers offer a comprehensive feature representation, effectively recognizing structures and capturing depth cues through their global context processing <xref ref-type="bibr" rid="bib1.bibx13 bib1.bibx72" id="paren.33"/>.</p>
      <p id="d2e1163">The DINOv2 ViT-S/14 backbone outputs a 384-dimensional embedding, which we passed into a lightweight regression head: a fully connected layer (<inline-formula><mml:math id="M34" display="inline"><mml:mrow><mml:mn mathvariant="normal">384</mml:mn><mml:mo>⟶</mml:mo><mml:mn mathvariant="normal">128</mml:mn></mml:mrow></mml:math></inline-formula>) with dropout (<inline-formula><mml:math id="M35" display="inline"><mml:mrow><mml:mtext>rate</mml:mtext><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.4</mml:mn></mml:mrow></mml:math></inline-formula>), GELU activation <xref ref-type="bibr" rid="bib1.bibx24" id="paren.34"/>, another fully connected layer (<inline-formula><mml:math id="M36" display="inline"><mml:mrow><mml:mn mathvariant="normal">128</mml:mn><mml:mo>⟶</mml:mo><mml:mn mathvariant="normal">43</mml:mn></mml:mrow></mml:math></inline-formula>), and a softmax output layer for a 43-bin probability distribution across 2° intervals from 0 to 90<inline-formula><mml:math id="M37" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">°</mml:mi></mml:mrow></mml:math></inline-formula>.</p>
      <p id="d2e1213">Images were resized to <inline-formula><mml:math id="M38" display="inline"><mml:mrow><mml:mn mathvariant="normal">224</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mrow class="unit"><mml:mi mathvariant="normal">pixels</mml:mi></mml:mrow><mml:mo>×</mml:mo><mml:mn mathvariant="normal">224</mml:mn><mml:mspace width="0.125em" linebreak="nobreak"/><mml:mrow class="unit"><mml:mi mathvariant="normal">pixels</mml:mi></mml:mrow></mml:mrow></mml:math></inline-formula> via linear interpolation. The augmentation pipeline included <italic>RandomResizedCrop</italic> (<inline-formula><mml:math id="M39" display="inline"><mml:mrow><mml:mtext>scale</mml:mtext><mml:mo>=</mml:mo><mml:mo>[</mml:mo><mml:mn mathvariant="normal">0.8</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">1.0</mml:mn><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula>) and horizontal flipping (50 <inline-formula><mml:math id="M40" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">%</mml:mi></mml:mrow></mml:math></inline-formula> probability), while photometric augmentations adjusted brightness and contrast (variation <inline-formula><mml:math id="M41" display="inline"><mml:mrow><mml:mtext>factors</mml:mtext><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.3</mml:mn></mml:mrow></mml:math></inline-formula>) and added Gaussian noise (<inline-formula><mml:math id="M42" display="inline"><mml:mrow><mml:mi mathvariant="italic">σ</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.02</mml:mn></mml:mrow></mml:math></inline-formula>) for improved robustness to sensor noise and artifacts.</p>
      <p id="d2e1292">Instead of training separate models for RGB and NIR imagery, we developed AngleCam V2 using a mixed-modality approach. This design ensures that, regardless of whether NIR or RGB data are available, no model switching or dataset separation is required. During each epoch, 50 <inline-formula><mml:math id="M43" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">%</mml:mi></mml:mrow></mml:math></inline-formula> of images were randomly presented as original RGB, while the remaining 50 <inline-formula><mml:math id="M44" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">%</mml:mi></mml:mrow></mml:math></inline-formula> were non-RGB variants: true grayscale and pseudo-NIR images generated through distance-based dimming (Sect. <xref ref-type="sec" rid="Ch1.S2.SS1.SSS3"/>; Fig. <xref ref-type="fig" rid="F2"/>). All images were normalized using ImageNet statistics (<inline-formula><mml:math id="M45" display="inline"><mml:mrow><mml:mtext>mean</mml:mtext><mml:mo>=</mml:mo><mml:mo>[</mml:mo><mml:mn mathvariant="normal">0.485</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">0.456</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">0.406</mml:mn><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M46" display="inline"><mml:mrow><mml:mtext>std</mml:mtext><mml:mo>=</mml:mo><mml:mo>[</mml:mo><mml:mn mathvariant="normal">0.229</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">0.224</mml:mn><mml:mo>,</mml:mo><mml:mn mathvariant="normal">0.225</mml:mn><mml:mo>]</mml:mo></mml:mrow></mml:math></inline-formula>).</p>
      <p id="d2e1365">The model was trained on an NVIDIA RTX A6000 GPU (48 GB RAM), with the final training run of 50 epochs completed in 24 <inline-formula><mml:math id="M47" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">min</mml:mi></mml:mrow></mml:math></inline-formula>. Hyperparameters were determined through testing of different configurations, including batch sizes (8–64), optimizers (Adam, AdamW, and SGD), and learning rates (<inline-formula><mml:math id="M48" display="inline"><mml:mrow><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>–<inline-formula><mml:math id="M49" display="inline"><mml:mrow><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>), alongside multiple regression head architectures with varying dropout rates (0–0.5) and weight decay settings (<inline-formula><mml:math id="M50" display="inline"><mml:mrow><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>–<inline-formula><mml:math id="M51" display="inline"><mml:mrow><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>).</p>
      <p id="d2e1432">The final configuration used the AdamW optimizer with an initial learning rate of <inline-formula><mml:math id="M52" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">4</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>, weight decay of 0.01, and gradient clipping (<inline-formula><mml:math id="M53" display="inline"><mml:mrow><mml:mtext>max norm</mml:mtext><mml:mo>=</mml:mo><mml:mn mathvariant="normal">3.0</mml:mn></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M54" display="inline"><mml:mrow><mml:msub><mml:mi>L</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msub></mml:mrow></mml:math></inline-formula> norm) to prevent overfitting <xref ref-type="bibr" rid="bib1.bibx41" id="paren.35"/>. Learning rate scheduling was managed with <italic>ReduceLROnPlateau</italic> (reduction factor 0.5, patience 5 epochs, minimum learning rate <inline-formula><mml:math id="M55" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">6</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>). Training was performed with a batch size of 32 and Huber loss to reduce sensitivity to outliers <xref ref-type="bibr" rid="bib1.bibx70" id="paren.36"/>. The final model was selected based on the lowest validation loss obtained through the 50 epochs.</p>
      <p id="d2e1504">Prior to splitting the dataset, three RGB images per genus were extracted to assess phylogenetic prediction errors (see next Sect. <xref ref-type="sec" rid="Ch1.S2.SS2"/>). The remaining labeled data were split <inline-formula><mml:math id="M56" display="inline"><mml:mrow><mml:mn mathvariant="normal">80</mml:mn><mml:mo>/</mml:mo><mml:mn mathvariant="normal">20</mml:mn></mml:mrow></mml:math></inline-formula> into training and validation sets, resulting in approximately 3600 images for training and 900 for validation. The random split resulted in some overlap of species and acquisition sites between training and validation sets. While fully independent validation datasets would be ideal, creating stratified splits across multiple dimensions (species, sites, temporal series, and leaf angles) would result in impractically small subsets. Importantly, images within shared species were captured across different seasons, phenological stages, and environmental conditions, providing substantial variability. Validation was performed exclusively on original RGB images since the pseudo-NIR and grayscale variants share the same labels. The model's capability to process NIR imagery was independently validated through controlled experiments using terrestrial laser scanning as reference data (Sect. <xref ref-type="sec" rid="Ch1.S2.SS3"/>).</p>
</sec>
</sec>
<sec id="Ch1.S2.SS2">
  <label>2.2</label><title>Phylogenetic error analysis</title>
      <p id="d2e1532">Predictive models in ecology often exhibit systematic biases when applied across different taxonomic groups, particularly when training data is not balanced across taxonomic and phylogenetic lineages <xref ref-type="bibr" rid="bib1.bibx44" id="paren.37"/>. Such phylogenetic autocorrelation in prediction errors can indicate dataset gaps, model limitations, or evolutionary constraints that limit generalizability <xref ref-type="bibr" rid="bib1.bibx62" id="paren.38"/>. This consideration is relevant for our dataset, where temporal monitoring at specific sites resulted in uneven species representation, with approximately 50 <inline-formula><mml:math id="M57" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">%</mml:mi></mml:mrow></mml:math></inline-formula> of training images originating from four species. Given this taxonomic imbalance, we assessed whether the residuals of AngleCam V2 are phylogenetically autocorrelated.</p>
      <p id="d2e1549">For images where species identification was not available in the original metadata, we determined plant species using the Pl@ntNet online identification tool <xref ref-type="bibr" rid="bib1.bibx55" id="paren.39"/>. Each identification was manually reviewed to assess plausibility at both species and genus levels. Due to increased uncertainty in species-level assignments from images, phylogenetic error analysis was performed at the genus level. To evaluate phylogenetic error in the residuals, three random images per genus were excluded from the training dataset and used for analysis. Genera with fewer than three samples were not analyzed due to insufficient significance. Consequently, from a total of 129 genera, 100 genera with 300 samples were included in the analysis.</p>
      <p id="d2e1555">For each genus, we calculated the LIAD residuals as the mean absolute deviation between AngleCam V2 predictions and labeled LIAD references. The genus-level errors were then mapped onto a phylogenetic tree to visualize error patterns between taxonomic groups. We quantified the phylogenetic signal in prediction errors using Pagel's <inline-formula><mml:math id="M58" display="inline"><mml:mi mathvariant="italic">λ</mml:mi></mml:math></inline-formula>, which measures the degree to which closely related genera exhibit similar prediction errors <xref ref-type="bibr" rid="bib1.bibx51" id="paren.40"/>. A <inline-formula><mml:math id="M59" display="inline"><mml:mi mathvariant="italic">λ</mml:mi></mml:math></inline-formula> near 1 indicates a strong phylogenetic influence, while a <inline-formula><mml:math id="M60" display="inline"><mml:mi mathvariant="italic">λ</mml:mi></mml:math></inline-formula> near 0 suggests independence from phylogeny <xref ref-type="bibr" rid="bib1.bibx29" id="paren.41"/>. We estimated Pagel's <inline-formula><mml:math id="M61" display="inline"><mml:mi mathvariant="italic">λ</mml:mi></mml:math></inline-formula> with the function <italic>phylosig</italic> of the <italic>R</italic>-package <italic>phytools</italic> (v.2.4-4).</p>
      <p id="d2e1602">We quantified phylogenetic autocorrelation in model residuals using Moran's <italic>I</italic> statistic calculated on phylogenetic distances <xref ref-type="bibr" rid="bib1.bibx45 bib1.bibx20" id="paren.42"/>. Significant positive autocorrelation would indicate that prediction errors are clustered within particular clades, suggesting systematic biases that could limit model transferability to underrepresented taxonomic groups <xref ref-type="bibr" rid="bib1.bibx23" id="paren.43"/>. We estimated Moran's <italic>I</italic> with the function <italic>moran.idx</italic> of the <italic>R</italic>-package <italic>adephylo</italic> (v.1.1-17).</p>
</sec>
<sec id="Ch1.S2.SS3">
  <label>2.3</label><title>Multitemporal model evaluation of AngleCam V2 with TLS-derived leaf inclination angle distributions</title>
<sec id="Ch1.S2.SS3.SSS1">
  <label>2.3.1</label><title>Experimental setup and data acquisition</title>
      <p id="d2e1642">We validated diurnal leaf inclination angle distributions obtained from AngleCam V2 against independent LIADs from terrestrial laser scanning (TLS). An indoor experiment was conducted with two species known for strong diurnal movements, <italic>Maranta leuconeura</italic> E. Morren and <italic>Calathea ornata</italic> (Linden) Körn, monitored from 17 to 20 January 2025.</p>
      <p id="d2e1651">The TLS scanner (Riegl VZ-400i; RIEGL Laser Measurement Systems GmbH, Horn, Austria) was positioned 1.5–2.0 <inline-formula><mml:math id="M62" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula> from the plants for unobstructed coverage, acquiring scans every 30 <inline-formula><mml:math id="M63" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">min</mml:mi></mml:mrow></mml:math></inline-formula>. It operates with a near-infrared laser (1550 <inline-formula><mml:math id="M64" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">nm</mml:mi></mml:mrow></mml:math></inline-formula>) and offers a measurement precision of 5 <inline-formula><mml:math id="M65" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">mm</mml:mi></mml:mrow></mml:math></inline-formula>, with a field of view of 100° vertical and 360° horizontal.</p>
      <p id="d2e1686">Two Ubiquiti UniFi G5 Bullet cameras (Ubiquiti Inc., New York, NY, USA) were installed 1 <inline-formula><mml:math id="M66" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula> from each plant, capturing images every 30 <inline-formula><mml:math id="M67" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">min</mml:mi></mml:mrow></mml:math></inline-formula> in both RGB and near-infrared modes (NIR range: 9 <inline-formula><mml:math id="M68" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula>) and synchronized with TLS acquisitions. Images were geometrically calibrated to correct for lens distortion.</p>
</sec>
<sec id="Ch1.S2.SS3.SSS2">
  <label>2.3.2</label><title>TLS data processing and AngleCam comparison</title>
      <p id="d2e1721">The TLS point clouds were processed to extract LIADs for comparison with AngleCam V2 predictions. The pipeline focused solely on leaf surfaces by manually defining bounding boxes to isolate target plants, eliminating stems, petioles, and background objects.</p>
      <p id="d2e1724">Point clouds were centered around the plant base for a consistent coordinate system. Surface normals were estimated using principal component analysis (PCA) within a 1 <inline-formula><mml:math id="M69" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">cm</mml:mi></mml:mrow></mml:math></inline-formula> radius, identifying the direction of least variance <xref ref-type="bibr" rid="bib1.bibx64 bib1.bibx28" id="paren.44"/>. Normals were oriented toward the scanner for consistent angle calculations, and the point clouds were subsampled with a voxel grid at a 1 <inline-formula><mml:math id="M70" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">cm</mml:mi></mml:mrow></mml:math></inline-formula> resolution to reduce density variation.</p>
      <p id="d2e1746">For statistical analysis, TLS-derived LIADs were temporally aligned with AngleCam predictions based on acquisition timestamps. Quantitative comparisons were performed on average leaf angle values from LIAD distributions and the closest-in-time AngleCam predictions, calculating metrics like the coefficient of determination (<inline-formula><mml:math id="M71" display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>) and root mean square error (RMSE) for each matched time point.</p>
</sec>
</sec>
<sec id="Ch1.S2.SS4">
  <label>2.4</label><title>Multitemporal model evaluation of AngleCam V2 under water limitation</title>
      <p id="d2e1769">We performed an additional indoor experiment to assess whether AngleCam V2 captures extended, multi-day trends under plant water limitation. We positioned an individual <italic>Aglaonema commutatum</italic> Schott in front of a window and recorded images as described above over 14 <inline-formula><mml:math id="M72" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">d</mml:mi></mml:mrow></mml:math></inline-formula> (17–31 December 2024). Images were acquired every two minutes, resulting in 8783 images. The plant was last watered on 12 December and thus remained without irrigation for 19 <inline-formula><mml:math id="M73" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">d</mml:mi></mml:mrow></mml:math></inline-formula> by the end of monitoring. While the experiment followed this known watering history, no concurrent measurements of soil moisture or plant water status were collected.</p>
</sec>
</sec>
<sec id="Ch1.S3">
  <label>3</label><title>Results</title>
<sec id="Ch1.S3.SS1">
  <label>3.1</label><title>Model performance on training and validation data</title>
      <p id="d2e1807">The model evaluation revealed distinct performance patterns across training and validation datasets, as well as a substantial improvement over the previous model version V1 (Fig. <xref ref-type="fig" rid="F3"/>). For the training dataset, we found a strong correspondence between the predicted and reference average leaf angles (<inline-formula><mml:math id="M74" display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.75</mml:mn></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M75" display="inline"><mml:mrow><mml:mtext>RMSE</mml:mtext><mml:mo>=</mml:mo><mml:mn mathvariant="normal">7.37</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M76" display="inline"><mml:mrow><mml:mi>n</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">3591</mml:mn></mml:mrow></mml:math></inline-formula>). The regression relationship indicated a minor overestimation of shallower angles and an underestimation of steeper angles. The AngleCam V2 performance assessment on the validation dataset resulted in an <inline-formula><mml:math id="M77" display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.62</mml:mn></mml:mrow></mml:math></inline-formula> and <inline-formula><mml:math id="M78" display="inline"><mml:mrow><mml:mtext>RMSE</mml:mtext><mml:mo>=</mml:mo><mml:mn mathvariant="normal">9.32</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M79" display="inline"><mml:mrow><mml:mi>n</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">899</mml:mn></mml:mrow></mml:math></inline-formula>, Fig. <xref ref-type="fig" rid="F3"/>b).</p>

      <fig id="F3" specific-use="star"><label>Figure 3</label><caption><p id="d2e1899">Comparison of AngleCam V1 and V2 performance across training and validation dataset. Kernel-density scatter plots show the joint distribution of predicted and reference average leaf angles (0–90°) for <bold>(a)</bold> the training set of AngleCam V2, <bold>(b)</bold> the independent validation set of AngleCam V2, and <bold>(c)</bold> the same validation set evaluated with AngleCam V1. Colors represent point density (dark <inline-formula><mml:math id="M80" display="inline"><mml:mo>=</mml:mo></mml:math></inline-formula> high density), the dashed gray line marks the <inline-formula><mml:math id="M81" display="inline"><mml:mrow><mml:mn mathvariant="normal">1</mml:mn><mml:mo>:</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:math></inline-formula> relationship, and the solid black line is the ordinary-least-squares regression fit (equation inset). Insets additionally report the coefficient of determination (<inline-formula><mml:math id="M82" display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula>), root-mean-square error (RMSE, degrees), and sample size (<inline-formula><mml:math id="M83" display="inline"><mml:mi>n</mml:mi></mml:math></inline-formula>).</p></caption>
          <graphic xlink:href="https://bg.copernicus.org/articles/23/5607/2026/bg-23-5607-2026-f03.png"/>

        </fig>

      <p id="d2e1955">Comparison with AngleCam V1 on the same validation dataset revealed clear performance improvements of AngleCam V2. AngleCam V1 achieved <inline-formula><mml:math id="M84" display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.12</mml:mn></mml:mrow></mml:math></inline-formula> with <inline-formula><mml:math id="M85" display="inline"><mml:mrow><mml:mtext>RMSE</mml:mtext><mml:mo>=</mml:mo><mml:mn mathvariant="normal">14.19</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula> (Fig. <xref ref-type="fig" rid="F3"/>c). Its predictions exhibited greater dispersion and stronger systematic bias, tending to predict intermediate average leaf angles.</p>
      <p id="d2e1990">In addition to average angle performance, the model's ability to capture the entire distribution shape was evaluated by analyzing bin-wise prediction errors (predicted minus reference probability) across 43 leaf angle bins (Fig. <xref ref-type="fig" rid="F4"/>). For the training set, the mean error remained centered around zero for all angle bins, with a stable percentile band and only a minor negative dip in the 10th percentile between 10–<inline-formula><mml:math id="M86" display="inline"><mml:mrow><mml:mn mathvariant="normal">25</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula> (Fig. <xref ref-type="fig" rid="F4"/>a). In the validation set, AngleCam V2 similarly maintained a mean error near zero, with a slight positive deviation between 40–<inline-formula><mml:math id="M87" display="inline"><mml:mrow><mml:mn mathvariant="normal">60</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula>, and a more pronounced negative dip in the 10th percentile at lower angles (<inline-formula><mml:math id="M88" display="inline"><mml:mn mathvariant="normal">10</mml:mn></mml:math></inline-formula>–<inline-formula><mml:math id="M89" display="inline"><mml:mrow><mml:mn mathvariant="normal">25</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula>) (Fig. <xref ref-type="fig" rid="F4"/>b). By contrast, AngleCam V1 exhibited a pronounced angle-dependent bias on the same validation data, with underprediction at low angles (<inline-formula><mml:math id="M90" display="inline"><mml:mn mathvariant="normal">10</mml:mn></mml:math></inline-formula>–<inline-formula><mml:math id="M91" display="inline"><mml:mrow><mml:mn mathvariant="normal">20</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula>), increasing overprediction at higher angles, and a widening distribution spread toward extreme orientations (Fig. <xref ref-type="fig" rid="F4"/>c).</p>

      <fig id="F4" specific-use="star"><label>Figure 4</label><caption><p id="d2e2059">Bin-wise prediction errors for leaf inclination angle distributions are shown for: <bold>(a)</bold> the training dataset (AngleCam V2, <inline-formula><mml:math id="M92" display="inline"><mml:mrow><mml:mi>n</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">3591</mml:mn></mml:mrow></mml:math></inline-formula>), <bold>(b)</bold> the validation dataset (AngleCam V2, <inline-formula><mml:math id="M93" display="inline"><mml:mrow><mml:mi>n</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">899</mml:mn></mml:mrow></mml:math></inline-formula>), and <bold>(c)</bold> the validation dataset (AngleCam V1, <inline-formula><mml:math id="M94" display="inline"><mml:mrow><mml:mi>n</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">899</mml:mn></mml:mrow></mml:math></inline-formula>). Each plot displays the error distribution (predicted minus reference probability) for every 2° angle bin. Solid lines show the mean error, while dashed lines represent the 10th and 90th percentiles. Positive values indicate overprediction and negative values underprediction.</p></caption>
          <graphic xlink:href="https://bg.copernicus.org/articles/23/5607/2026/bg-23-5607-2026-f04.png"/>

        </fig>

</sec>
<sec id="Ch1.S3.SS2">
  <label>3.2</label><title>Phylogenetic error assessment</title>
      <p id="d2e2122">We analyzed prediction errors across 100 genera to test whether model performance was systematically structured by phylogeny. Mean absolute errors ranged from around 1–<inline-formula><mml:math id="M95" display="inline"><mml:mrow><mml:mn mathvariant="normal">15</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula>, with the majority of genera falling between 4–<inline-formula><mml:math id="M96" display="inline"><mml:mrow><mml:mn mathvariant="normal">10</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula> (Fig. <xref ref-type="fig" rid="F5"/>). The smallest errors were observed in genera such as <italic>Pilea</italic> and <italic>Nothofagus</italic>, while the largest occurred in <italic>Arbutus</italic> and <italic>Olea</italic> (see Table S1 in the Supplement for all genus-level MAE values). When mapped onto the phylogenetic tree, prediction errors showed no significant clustering. Pagel's <inline-formula><mml:math id="M97" display="inline"><mml:mi mathvariant="italic">λ</mml:mi></mml:math></inline-formula> was near zero (<inline-formula><mml:math id="M98" display="inline"><mml:mrow><mml:mi mathvariant="italic">λ</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">7.41</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>), with no significant deviation from the null hypothesis of <inline-formula><mml:math id="M99" display="inline"><mml:mrow><mml:mi mathvariant="italic">λ</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0</mml:mn></mml:mrow></mml:math></inline-formula> (no phylogenetic structure, <inline-formula><mml:math id="M100" display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1.0</mml:mn></mml:mrow></mml:math></inline-formula>), indicating that no statistically significant phylogenetic structure was present in the residuals. Consistently, Moran's <inline-formula><mml:math id="M101" display="inline"><mml:mi>I</mml:mi></mml:math></inline-formula> showed weak positive autocorrelation (<inline-formula><mml:math id="M102" display="inline"><mml:mrow><mml:mi>I</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.074</mml:mn></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M103" display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.23</mml:mn></mml:mrow></mml:math></inline-formula>), supporting the finding that model residuals were not significantly structured by evolutionary relatedness within the sampled 100 genera.</p>

      <fig id="F5" specific-use="star"><label>Figure 5</label><caption><p id="d2e2247">Phylogenetic distribution of AngleCam V2 prediction performance across 100 plant genera. Colored outer bars show residual per genus, computed for genera with at least three observations. Residuals show no significant clustering by clade. Pagel's <inline-formula><mml:math id="M104" display="inline"><mml:mi mathvariant="italic">λ</mml:mi></mml:math></inline-formula> is near zero (<inline-formula><mml:math id="M105" display="inline"><mml:mrow><mml:mi mathvariant="italic">λ</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">7.41</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M106" display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1.0</mml:mn></mml:mrow></mml:math></inline-formula>), indicating no phylogenetic structure. Moran's <inline-formula><mml:math id="M107" display="inline"><mml:mi>I</mml:mi></mml:math></inline-formula> shows weak autocorrelation (<inline-formula><mml:math id="M108" display="inline"><mml:mrow><mml:mi>I</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.074</mml:mn></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M109" display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.23</mml:mn></mml:mrow></mml:math></inline-formula>). Together, these results indicate that there is no detectable phylogenetic autocorrelation in model errors.</p></caption>
          <graphic xlink:href="https://bg.copernicus.org/articles/23/5607/2026/bg-23-5607-2026-f05.png"/>

        </fig>

</sec>
<sec id="Ch1.S3.SS3">
  <label>3.3</label><title>Multitemporal model evaluation of AngleCam V2 with TLS-derived leaf inclination angle distributions</title>
      <p id="d2e2337">We validated AngleCam V2 predictions against independent TLS measurements using two indoor plant species (<italic>Calathea ornata</italic> and <italic>Maranta leuconeura</italic>) monitored continuously over nearly three days. Both species displayed pronounced diurnal leaf angle movements, which were captured by both the AngleCam and the TLS approach (Fig. <xref ref-type="fig" rid="F6"/>).</p>

      <fig id="F6" specific-use="star"><label>Figure 6</label><caption><p id="d2e2350">Multitemporal evaluation of AngleCam V2 predictions against TLS measurements for two plant species known for strong diurnal leaf movements. Time series show average leaf inclination angles over nearly three days for <bold>(a)</bold> <italic>Calathea ornata</italic> (Global <inline-formula><mml:math id="M110" display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.61</mml:mn></mml:mrow></mml:math></inline-formula>) and <bold>(b)</bold> <italic>Maranta leuconeura</italic> (Global <inline-formula><mml:math id="M111" display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.75</mml:mn></mml:mrow></mml:math></inline-formula>), with both RGB and near-infrared night-vision imagery captured every 30 <inline-formula><mml:math id="M112" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">min</mml:mi></mml:mrow></mml:math></inline-formula>. Scatter plots (right panels) distinguish between daytime (RGB) and nighttime (NIR) performance, reporting separate Root Mean Square Errors (RMSE) for each modality. Distribution plots show example leaf inclination angle distributions at specific timestamps, with images illustrating plant appearance and 3D point cloud visualizations of the same setting. An interactive visualization can be accessed at <uri>https://github.com/Luis-Kr/AngleCamV2</uri> (last access: 30 July 2026).</p></caption>
          <graphic xlink:href="https://bg.copernicus.org/articles/23/5607/2026/bg-23-5607-2026-f06.png"/>

        </fig>

      <p id="d2e2413">For <italic>Calathea ornata</italic>, AngleCam predictions followed the TLS trends, but there was a systematic discrepancy throughout the monitoring period, most pronounced at lower average leaf angles (Fig. <xref ref-type="fig" rid="F6"/>a). The range of average leaf angles obtained by the two methods was very similar, ranging from approximately 45–<inline-formula><mml:math id="M113" display="inline"><mml:mrow><mml:mn mathvariant="normal">63</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula> for AngleCam and 50–<inline-formula><mml:math id="M114" display="inline"><mml:mrow><mml:mn mathvariant="normal">63</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula> for TLS. The average leaf angles derived from the two methods yielded a high global correspondence (<inline-formula><mml:math id="M115" display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.61</mml:mn></mml:mrow></mml:math></inline-formula>). Disaggregated by modality, the Root Mean Square Error (RMSE) was <inline-formula><mml:math id="M116" display="inline"><mml:mrow><mml:mn mathvariant="normal">7.6</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula> for daytime (RGB) and <inline-formula><mml:math id="M117" display="inline"><mml:mrow><mml:mn mathvariant="normal">3.6</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula> for nighttime (NIR) imagery.</p>
      <p id="d2e2478">The results for <italic>Maranta leuconeura</italic> showed stronger agreement (Fig. <xref ref-type="fig" rid="F6"/>b). AngleCam predictions closely matched TLS-based estimates across the entire time series, with average angles ranging from approximately 42–<inline-formula><mml:math id="M118" display="inline"><mml:mrow><mml:mn mathvariant="normal">65</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula> for both methods. The global correspondence was <inline-formula><mml:math id="M119" display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.75</mml:mn></mml:mrow></mml:math></inline-formula>. The model achieved close alignment across both modalities, with an RMSE of <inline-formula><mml:math id="M120" display="inline"><mml:mrow><mml:mn mathvariant="normal">3.5</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula> for daytime (RGB) and <inline-formula><mml:math id="M121" display="inline"><mml:mrow><mml:mn mathvariant="normal">3.1</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula> for nighttime (NIR) imagery.</p>
</sec>
<sec id="Ch1.S3.SS4">
  <label>3.4</label><title>Multitemporal model evaluation of AngleCam V2 under water limitation</title>
      <p id="d2e2540">We assessed AngleCam's sensitivity for tracking water limitation-induced changes in leaf angles by monitoring a non-watered individual of <italic>Aglaonema commutatum</italic> over an extended period of 14 <inline-formula><mml:math id="M122" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">d</mml:mi></mml:mrow></mml:math></inline-formula> (Fig. <xref ref-type="fig" rid="F7"/>a). The time series revealed a consistent increase in average leaf angle from approximately 43–<inline-formula><mml:math id="M123" display="inline"><mml:mrow><mml:mn mathvariant="normal">48</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M124" display="inline"><mml:mrow><mml:mtext>slope</mml:mtext><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.33</mml:mn><mml:mrow class="unit"><mml:mi mathvariant="normal">°</mml:mi><mml:mspace width="0.125em" linebreak="nobreak"/><mml:msup><mml:mi mathvariant="normal">d</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M125" display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">0.001</mml:mn></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M126" display="inline"><mml:mrow><mml:mi>n</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">8783</mml:mn></mml:mrow></mml:math></inline-formula>), becoming especially evident after 25 December. From this point onward, angles consistently exceeded the pre-25 December baseline and showed an increased diurnal amplitude. The imagery (Fig. <xref ref-type="fig" rid="F7"/>b) and corresponding leaf inclination angle distributions extracted at four time steps confirmed this trend, illustrating a gradual shift toward steeper angles (Fig. <xref ref-type="fig" rid="F7"/>c). The overall shape of the distributions remained largely stable, with a slight tendency toward right skew, underscoring the robustness of AngleCam predictions under gradually changing physiological conditions.</p>

      <fig id="F7" specific-use="star"><label>Figure 7</label><caption><p id="d2e2621">Tracking of leaf angle changes in <italic>Aglaonema commutatum</italic> induced by water limitation (14 <inline-formula><mml:math id="M127" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">d</mml:mi></mml:mrow></mml:math></inline-formula> without irrigation). <bold>(a)</bold> Time series showing a gradual increase in average leaf angles from approximately 43–48<inline-formula><mml:math id="M128" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">°</mml:mi></mml:mrow></mml:math></inline-formula> (<inline-formula><mml:math id="M129" display="inline"><mml:mrow><mml:mtext>slope</mml:mtext><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.33</mml:mn><mml:mrow class="unit"><mml:mi mathvariant="normal">°</mml:mi><mml:mspace linebreak="nobreak" width="0.125em"/><mml:msup><mml:mi mathvariant="normal">d</mml:mi><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">1</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M130" display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">0.001</mml:mn></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M131" display="inline"><mml:mrow><mml:mi>n</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">8783</mml:mn></mml:mrow></mml:math></inline-formula> measurements), with pronounced diurnal oscillations and increased amplitude compared to the pre-25 December baseline. The black line shows a linear trend with smoothed daily patterns overlaid. <bold>(b)</bold> Sequential NIR and RGB imagery at four time points showing visual progression of water limitation effects. <bold>(c)</bold> Corresponding leaf inclination angle distributions at the same time points, demonstrating the gradual shift toward steeper angles (dashed line shows average distribution of all 8783 samples) while maintaining overall distribution shape. The results demonstrate the potential of AngleCam for revealing gradual physiological changes and its application for long-term drought monitoring.</p></caption>
          <graphic xlink:href="https://bg.copernicus.org/articles/23/5607/2026/bg-23-5607-2026-f07.png"/>

        </fig>

</sec>
</sec>
<sec id="Ch1.S4">
  <label>4</label><title>Discussion</title>
<sec id="Ch1.S4.SS1">
  <label>4.1</label><title>Model performance on training and validation data</title>
      <p id="d2e2723">Our evaluation revealed that AngleCam V2 achieved stronger predictive performance compared to its predecessor (AngleCam V1). When evaluated on their respective original validation datasets, AngleCam V1 showed higher performance metrics (validation: <inline-formula><mml:math id="M132" display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.84</mml:mn></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M133" display="inline"><mml:mrow><mml:mtext>RMSE</mml:mtext><mml:mo>=</mml:mo><mml:mn mathvariant="normal">6.13</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula>; <xref ref-type="bibr" rid="bib1.bibx32" id="altparen.45"/>) compared to AngleCam V2 (validation: <inline-formula><mml:math id="M134" display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.62</mml:mn></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M135" display="inline"><mml:mrow><mml:mtext>RMSE</mml:mtext><mml:mo>=</mml:mo><mml:mn mathvariant="normal">9.32</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula>). However, when both models were evaluated on the new, more globally representative dataset, AngleCam V2 demonstrated substantially superior generalization, with an <inline-formula><mml:math id="M136" display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> of 0.62, compared to AngleCam V1's <inline-formula><mml:math id="M137" display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup></mml:mrow></mml:math></inline-formula> of 0.12. For this comparison, AngleCam V1 was applied as originally trained without any retraining on the expanded dataset. The increased performance can be attributed to the fact that AngleCam V2 was trained on an expanded dataset with considerably greater species diversity and scene heterogeneity than the first version. This expansion deliberately introduced more variation in leaf morphologies, growth forms, environmental conditions, cameras, and data acquisition settings, enhancing the model's ability to generalize across diverse ecological contexts and data acquisition scenarios.</p>
      <p id="d2e2810">The expanded dataset inevitably introduced additional label noise as well as variability in image features unrelated to actual leaf angle differences, both of which can bias a model <xref ref-type="bibr" rid="bib1.bibx19 bib1.bibx5" id="paren.46"/>. While large training sets can help mitigate such effects <xref ref-type="bibr" rid="bib1.bibx63" id="paren.47"/>, complex deep learning models may still memorize noise or spurious patterns instead of extracting meaningful signals. Given our dataset size and the deep transformer model (DINOv2), this risk would manifest as low bias but high variance if regularization were insufficient. To address this, we implemented stronger regularization strategies compared to AngleCam V1. A dropout rate of 0.4 in the regression head randomly deactivated 40 <inline-formula><mml:math id="M138" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">%</mml:mi></mml:mrow></mml:math></inline-formula> of units during each forward pass, facilitating the model to rely on robust features rather than memorizing training-specific patterns. Weight decay provided additional regularization by penalizing large parameter values, encouraging smoother angle approximations <xref ref-type="bibr" rid="bib1.bibx41 bib1.bibx79" id="paren.48"/>. We also transitioned from mean squared error (MSE) to Huber loss, which treats outliers more robustly by being quadratic for small errors and linear for large errors <xref ref-type="bibr" rid="bib1.bibx70" id="paren.49"/>. Together, these techniques facilitated the model to extract meaningful signals from the expanded dataset while ensuring the generalization of the model over the more variable scene conditions and taxa.</p>
      <p id="d2e2833">The validation results revealed a tendency where low leaf angles were overestimated and high angles were underestimated. We assume that this bias, also known as regression to the mean bias <xref ref-type="bibr" rid="bib1.bibx4" id="paren.50"/>, emerges from the training data distribution, which contains abundant samples between 35–50<inline-formula><mml:math id="M139" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">°</mml:mi></mml:mrow></mml:math></inline-formula> but relatively few extreme cases below 20° or above 60°. The bin-wise error analysis (Fig. <xref ref-type="fig" rid="F4"/>) further clarifies this bias, where AngleCam V2 maintains a mean error near zero across the distribution range but shows an increased spread in the 10th percentile at lower angles (<inline-formula><mml:math id="M140" display="inline"><mml:mn mathvariant="normal">10</mml:mn></mml:math></inline-formula>–<inline-formula><mml:math id="M141" display="inline"><mml:mrow><mml:mn mathvariant="normal">25</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula>) in the validation set. This pattern reflects greater uncertainty when the model encounters these less frequently represented orientations. Nevertheless, the stability of the mean error across all bins represents a major advancement over AngleCam V1, which exhibited a pronounced, systematic angle-dependent bias and increasing variance toward extreme orientations.</p>
      <p id="d2e2866">Consequently, AngleCam V2 achieves its highest performance for intermediate LIAD types, such as spherical or plagiophile, while demonstrating reduced accuracy for extreme planophile or erectophile canopy structures. Several approaches could address this imbalance, such as loss weighting to give more importance to rare, extreme angles during training, or a weighted training sampler that increases the selection frequency of underrepresented angle ranges. However, such interventions require careful implementation to avoid introducing artificial biases or unstable prediction behavior <xref ref-type="bibr" rid="bib1.bibx4" id="paren.51"/>. AngleCam development remains an ongoing process, and future versions will focus on expanding training diversity in extreme angle scenarios.</p>
</sec>
<sec id="Ch1.S4.SS2">
  <label>4.2</label><title>Phylogenetic error assessment</title>
      <p id="d2e2880">The residual analysis revealed no statistically significant phylogenetic signal in prediction errors (Fig. <xref ref-type="fig" rid="F5"/>), indicating that AngleCam V2 learned general principles of leaf angle estimation that transfer across taxonomic and evolutionary lineages. The absence of phylogenetic autocorrelation suggests the model captures fundamental geometric relationships rather than taxon-specific visual features. Pagel's <inline-formula><mml:math id="M142" display="inline"><mml:mi mathvariant="italic">λ</mml:mi></mml:math></inline-formula> was near zero (<inline-formula><mml:math id="M143" display="inline"><mml:mrow><mml:mi mathvariant="italic">λ</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">7.41</mml:mn><mml:mo>×</mml:mo><mml:msup><mml:mn mathvariant="normal">10</mml:mn><mml:mrow><mml:mo>-</mml:mo><mml:mn mathvariant="normal">5</mml:mn></mml:mrow></mml:msup></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M144" display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">1.0</mml:mn></mml:mrow></mml:math></inline-formula>), indicating that no statistically significant phylogenetic structure was detected in the prediction errors. Similarly, Moran's <inline-formula><mml:math id="M145" display="inline"><mml:mi>I</mml:mi></mml:math></inline-formula> showed only weak, non-significant autocorrelation (<inline-formula><mml:math id="M146" display="inline"><mml:mrow><mml:mi>I</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.074</mml:mn></mml:mrow></mml:math></inline-formula>, <inline-formula><mml:math id="M147" display="inline"><mml:mrow><mml:mi>p</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.23</mml:mn></mml:mrow></mml:math></inline-formula>), providing no evidence of systematic phylogenetic bias within the current dataset.</p>
      <p id="d2e2958">The substantial representation of <italic>Tilia</italic>, <italic>Acer</italic>, <italic>Quercus</italic>, and <italic>Fagus</italic> in our training dataset (see also Fig. <xref ref-type="fig" rid="F1"/>, Table S1) results from continuous time-series monitoring, providing extensive environmental and phenological coverage across these genera. Notably, the phylogenetic analysis demonstrates that prediction errors are not systematically lower for such well-represented genera compared to those with fewer training samples. Although more balanced taxonomic representation would be ideal for future datasets, the temporal richness within these dominant genera added training diversity across environmental conditions without compromising model generalization.</p>
      <p id="d2e2975">This supports applying AngleCam to new species, given that their broader taxonomic groups are reasonably represented in the training data. Still, generalization has its limits: performance may degrade for clades that are sparsely or not represented at all, and clade-specific biases may emerge in such cases. Overall, while the absence of a detectable phylogenetic signal suggests that within-genus variation in leaf morphology and growth dynamics is reasonably captured by our training set, we acknowledge that the limited sample size (100 genera) may mask modest clade-specific biases that could emerge with larger sample sizes or higher taxonomic resolution.</p>
</sec>
<sec id="Ch1.S4.SS3">
  <label>4.3</label><title>Evaluating AngleCam on representing leaf angle diurnal dynamics</title>
      <p id="d2e2987">Our controlled testing experiments with TLS demonstrated AngleCam V2's ability to track temporal leaf angle dynamics across day-night cycles. As demonstrated for <italic>Maranta leuconeura</italic> and <italic>Calathea ornata</italic>, the model captured natural circadian leaf movements despite never being explicitly trained on labeled NIR imagery. This capability emerged from our dual-modality training strategy, combining grayscale conversion with pseudo-NIR generation as a proxy for actual night-vision data. This workaround was required by the high labor intensity of manual leaf annotation. While our RGB dataset is extensive, replicating this sample size with manually labeled NIR imagery was not feasible within the scope of the current study.</p>
      <p id="d2e2996">As shown by the TLS comparison, this strategy proved effective for the tested species. For <italic>Calathea ornata</italic> (Global <inline-formula><mml:math id="M148" display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.61</mml:mn></mml:mrow></mml:math></inline-formula>), the model achieved an RMSE of <inline-formula><mml:math id="M149" display="inline"><mml:mrow><mml:mn mathvariant="normal">7.6</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula> for daytime (RGB) and <inline-formula><mml:math id="M150" display="inline"><mml:mrow><mml:mn mathvariant="normal">3.6</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula> for nighttime (NIR) imagery. For <italic>Maranta leuconeura</italic> (Global <inline-formula><mml:math id="M151" display="inline"><mml:mrow><mml:msup><mml:mi>R</mml:mi><mml:mn mathvariant="normal">2</mml:mn></mml:msup><mml:mo>=</mml:mo><mml:mn mathvariant="normal">0.75</mml:mn></mml:mrow></mml:math></inline-formula>), performance was even more consistent, with an RMSE of <inline-formula><mml:math id="M152" display="inline"><mml:mrow><mml:mn mathvariant="normal">3.5</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula> for RGB and <inline-formula><mml:math id="M153" display="inline"><mml:mrow><mml:mn mathvariant="normal">3.1</mml:mn><mml:mi mathvariant="italic">°</mml:mi></mml:mrow></mml:math></inline-formula> for NIR imagery. Although these results indicate that the model can generalize to real night-vision environments, the pseudo-NIR pipeline remains an approximation with inherent physical limitations. Specifically, pseudo-NIR images retain daytime ambient shadows and may exhibit depth-based overexposure or less plausible illumination falloff compared to true NIR backscatter (a detailed characterization of these discrepancies and visual comparisons to real NIR imagery are provided in Sect. S2 in the Supplement). As a result, the synthetic labels do not serve as a perfect substitute for true NIR annotations. Nevertheless, this method effectively leverages the existing RGB dataset to enable 24-h monitoring, avoiding the constraints of extensive manual NIR labeling. Future iterations incorporating large-scale, independently labeled NIR datasets will be essential to further improve night-vision accuracy and to address sensor-specific discrepancies.</p>
      <p id="d2e3076">The systematic underestimation observed in <italic>Calathea ornata</italic> relative to TLS may result from sampling biases inherent to laser scanning, where vertical leaves intercept more pulses and can inflate angle estimates <xref ref-type="bibr" rid="bib1.bibx27" id="paren.52"/>. The use of 1 <inline-formula><mml:math id="M154" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">cm</mml:mi></mml:mrow></mml:math></inline-formula> voxel downsampling and the spherical distribution of <italic>Maranta leuconeura</italic> minimized this effect. However, the fixed TLS position, which was necessary for continuous 30-min sampling over several days, likely introduced some occlusion-related bias. Future studies could address this by employing multiple fixed scanners or, for shorter intensive campaigns, by conducting sequential multi-view scans.</p>
      <p id="d2e3096">Species-specific performance variations may also indicate current model generalization limits. The superior results for <italic>Maranta leuconeura</italic> likely reflect the presence of morphologically similar taxa in the training set (<italic>Ctenanthe burle-marxii</italic>, <inline-formula><mml:math id="M155" display="inline"><mml:mrow><mml:mi>n</mml:mi><mml:mo>=</mml:mo><mml:mn mathvariant="normal">7</mml:mn></mml:mrow></mml:math></inline-formula>), which share comparable leaf architecture. In contrast, <italic>Calathea ornata</italic> lacked such representatives beyond the experimental samples themselves. This indicates that model performance can depend on exposure to similar species during training. When deploying AngleCam for experimental monitoring, particularly for species that are not adequately represented by morphologically similar taxa in the training dataset, we recommend acquiring at least 15–20 labeled images from the target scene for model calibration. We provide an open-source labeling tool, pre-trained model weights, and a retraining framework (<uri>https://github.com/Luis-Kr/AngleCamV2</uri>,  last access: 30 July 2026), enabling a flexible adaptation of AngleCam to particular experimental conditions.</p>
</sec>
<sec id="Ch1.S4.SS4">
  <label>4.4</label><title>Application of AngleCam in future research</title>
      <p id="d2e3131">AngleCam V2 addresses limitations in low-cost and scalable leaf angle monitoring by enabling continuous day-night observations, opening up new possibilities for ecosystem research. The method's compatibility with standard time-lapse cameras, low hardware costs relative to laser scanning systems, and minimal field maintenance requirements make it a valuable asset for long-term monitoring networks (e.g. flux-towers, biodiversity experiments, PhenoCam). Integration with eddy covariance measurements could provide insights into how diurnal and seasonal leaf movements are coupled with carbon fluxes and ecosystem-atmosphere interactions <xref ref-type="bibr" rid="bib1.bibx3" id="paren.53"/>. Given that variable vertical leaf angle profiles impact light interception and canopy energy balance, continuous monitoring could enhance our understanding of ecosystem responses to environmental changes <xref ref-type="bibr" rid="bib1.bibx78" id="paren.54"/>.</p>
      <p id="d2e3140">Despite recent advances, knowledge about factors driving leaf angle dynamics remains limited. While diurnal patterns and vertical LIAD gradients are documented <xref ref-type="bibr" rid="bib1.bibx40 bib1.bibx54 bib1.bibx30 bib1.bibx14" id="paren.55"/>, the relative importance of light availability vs. water stress in controlling these dynamics is poorly understood <xref ref-type="bibr" rid="bib1.bibx78 bib1.bibx32" id="paren.56"/>. AngleCam's high temporal resolution and multi-height deployment capability can help to address this knowledge gap. Over the course of the 14-d experiment in this study, progressive soil drainage (with the plant remaining unwatered for a total of 19 <inline-formula><mml:math id="M156" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">d</mml:mi></mml:mrow></mml:math></inline-formula>) revealed that the leaf inclination angle distributions of <italic>Aglaonema commutatum</italic> responded rapidly to water limitation. AngleCam's sensitivity to changes in plant condition enabled quantification of these dynamics, demonstrating its potential for tracking plant responses to climate extremes, such as atmospheric or soil drought. Interestingly, we observed two trends: a steady increase in average leaf angles and a progressive amplification of diurnal variation. These findings align with a previous study on five temperate tree species, which showed that leaf angle dynamics respond both in absolute values and in their temporal variability <xref ref-type="bibr" rid="bib1.bibx32 bib1.bibx33" id="paren.57"/>. In the future, simultaneous monitoring of plant physiological parameters (e.g. sap flow, stem water potential), environmental conditions (e.g. temperature, light intensity), and ecosystem fluxes (e.g. carbon and water exchange) alongside leaf angle dynamics could help uncover the mechanistic drivers of these dynamics and support the use of leaf angle as an indicator of plant physiological status. However, given that species respond differently to environmental stresses, such applications would likely require species-specific training and calibration to establish reliable relationships between leaf angle changes and physiological conditions.</p>
      <p id="d2e3163">Past and current deployments of AngleCam reflect its potential for ecological and plant physiological research. Installations at the Leipzig Canopy Crane <xref ref-type="bibr" rid="bib1.bibx60" id="paren.58"/>, the MyDiv experiment <xref ref-type="bibr" rid="bib1.bibx16" id="paren.59"/>, and the ArboFun experiment <xref ref-type="bibr" rid="bib1.bibx37" id="paren.60"/>, all part of the German Centre for Integrative Biodiversity Research (iDiv), explore how structural, taxonomic, and functional diversity shape leaf angle dynamics for temperate tree species. In addition, AngleCam installations at the ECOSENSE site in Ettenheim <xref ref-type="bibr" rid="bib1.bibx75" id="paren.61"/> and at the Hartheim Research Station in Germany (Integrated Carbon Observation System (ICOS) flux-tower site) cover multiple individuals of temperate broad-leaved tree species. All of the above-mentioned installations capture leaf movements alongside comprehensive physiological and environmental measurements. Expanding such integrated monitoring to other research infrastructures and biomes could significantly enhance our understanding of leaf angle dynamics. Existing PhenoCam and eddy covariance flux tower networks <xref ref-type="bibr" rid="bib1.bibx9 bib1.bibx59" id="paren.62"/> offer ideal platforms for scaling up AngleCam installations and linking leaf angle variability to plant and ecosystem function at broader spatial and temporal scales. However, accurate LIAD estimation with AngleCam depends on a horizontal camera orientation. Successful integration into these networks would require either identifying existing cameras with appropriate horizontal geometries or installing dedicated sensors that conform to the required acquisition geometry. Similarly, the distance to the canopy influences the effective spatial resolution. While the model training covered typical detection ranges (<inline-formula><mml:math id="M157" display="inline"><mml:mrow><mml:mo>&lt;</mml:mo><mml:mn mathvariant="normal">2</mml:mn></mml:mrow></mml:math></inline-formula> <inline-formula><mml:math id="M158" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula>), images must be taken close enough to clearly resolve individual leaves.</p>
      <p id="d2e3200">When deploying AngleCam for ecological monitoring, it is essential to consider the spatial representativeness of the imagery. A single horizontal photograph captures only the foliage within the camera's field of view, typically representing a local portion of the canopy at a distance of approximately 1–2 <inline-formula><mml:math id="M159" display="inline"><mml:mrow class="unit"><mml:mi mathvariant="normal">m</mml:mi></mml:mrow></mml:math></inline-formula>. As a result, AngleCam reports the LIAD of the visible leaf surfaces from that specific perspective. Because leaf orientation may display directional patterns or canopy asymmetries, such as those caused by phototropism or prevailing winds, LIAD estimates can vary depending on the azimuth from which photographs are taken. To achieve a representative characterization of the entire canopy structure, camera placement should account for these spatial variations. We recommend spatial replication, including image acquisition from multiple azimuths and different heights, to capture a comprehensive distribution of leaf angles.</p>
      <p id="d2e3212">Beyond ecological and physiological monitoring at local scales, understanding leaf angle dynamics is also critical for interpreting vegetation signals in satellite-based Earth observation. Leaf angles affect the scattering and absorption of light within plant canopies and thereby influence radiative transfer processes <xref ref-type="bibr" rid="bib1.bibx22 bib1.bibx31" id="paren.63"/>. Temporal changes in vertical leaf angles can significantly alter reflectance signals and systematically confound widely used vegetation indices, such as kNDVI <xref ref-type="bibr" rid="bib1.bibx33 bib1.bibx22" id="paren.64"/> or fluorescence signals <xref ref-type="bibr" rid="bib1.bibx26" id="paren.65"/>. These changes are often not random noise but reflect structured responses to environmental drivers like temperature or radiation <xref ref-type="bibr" rid="bib1.bibx32" id="paren.66"/>. Thus, unresolved leaf angle dynamics may obscure or mimic other physiological variability, such as vegetation productivity changes when observed from space. At the same time, this sensitivity to environmental cues means that remotely sensed variations in canopy reflectance may contain embedded signals of leaf angle movements. AngleCam can thus contribute to disentangling these effects by providing temporally resolved parameters in radiative transfer modeling or by acting as a covariate to better interpret satellite observations of vegetation stress <xref ref-type="bibr" rid="bib1.bibx22 bib1.bibx33 bib1.bibx26" id="paren.67"/>.</p>
      <p id="d2e3230">The model's demonstrated generalization across different scene conditions, growth forms, and taxonomic and phylogenetic lineages can unlock large-scale applications in concert with citizen science platforms. Particularly, citizen science apps for plant species recognition, such as iNaturalist or Pl@ntNet, acquire millions of geolocation plant images each year, many of which are acquired with sufficient distance and camera perspectives compatible with AngleCam <xref ref-type="bibr" rid="bib1.bibx42 bib1.bibx17 bib1.bibx68" id="paren.68"/>. Previous studies have already highlighted the value of citizen science data for uncovering plant functional traits or phenology across spatiotemporal scales <xref ref-type="bibr" rid="bib1.bibx43 bib1.bibx76 bib1.bibx67" id="paren.69"/>. Accordingly, citizen science data may also represent an unprecedented data treasure to uncover global patterns in leaf inclination angle distributions at the species and community level, biogeographic variations in leaf positioning strategies, or seasonal adaptation patterns across biomes. This approach would substantially expand our understanding of how leaf angles are organized within and across species worldwide, potentially uncovering previously unknown global patterns in plant structural adaptation <xref ref-type="bibr" rid="bib1.bibx39" id="paren.70"/>.</p>
</sec>
</sec>
<sec id="Ch1.S5" sec-type="conclusions">
  <label>5</label><title>Conclusions</title>
      <p id="d2e3252">We introduced AngleCam V2, an enhanced deep learning model for estimating leaf inclination angle distributions from RGB and night-vision NIR imagery. Expanding the training dataset to include diverse species and canopy structures, combined with grayscale and pseudo-NIR transformations that leverage extensive existing RGB labels, has improved generalization and temporal robustness, including compatibility with nighttime imagery.</p>
      <p id="d2e3255">Testing against terrestrial laser scanning (TLS) demonstrated the capability of AngleCam V2 to track diurnal leaf movements across day and night imagery. As shown in a water limitation experiment, the model also captured multi-day trends in leaf angle variability. Additionally, phylogenetic analysis across 100 genera revealed no statistically significant systematic bias in predictions, supporting the model's generalizability across a wide range of plant species.</p>
      <p id="d2e3258">A central feature of AngleCam is its broad applicability: it can be used with standard imagery from smartphones and time-lapse cameras to PhenoCam networks, provided cameras are oriented horizontally. The method requires no specialized hardware, making it easy to deploy in field, lab, or citizen science settings. This enables both high-frequency monitoring of leaf angle dynamics over time and flexible snapshot-based assessments using handheld devices. AngleCam V2 thus provides a scalable, accessible, and open-source tool for monitoring leaf angle dynamics across time, taxa, and environments.</p>
</sec>

      
      </body>
    <back><notes notes-type="codedataavailability"><title>Code and data availability</title>

      <p id="d2e3265">All data are available on Zenodo at  <ext-link xlink:href="https://doi.org/10.5281/zenodo.17086253" ext-link-type="DOI">10.5281/zenodo.17086253</ext-link> <xref ref-type="bibr" rid="bib1.bibx34" id="paren.71"/>, organized into four directories: training/validation images with annotations (01_Training_Validation_Data/), multitemporal test imagery with TLS validation (02_Test_Data/), model weights and predictions (03_Model_Outputs/), and supplementary materials (04_Supplementary_Material/). The source code is available at <uri>https://github.com/Luis-Kr/AngleCamV2</uri>  (last access: 30 July 2026) and archived at <ext-link xlink:href="https://doi.org/10.5281/zenodo.21700815" ext-link-type="DOI">10.5281/zenodo.21700815</ext-link> <xref ref-type="bibr" rid="bib1.bibx36" id="paren.72"/>. The pretrained model is available at  <ext-link xlink:href="https://doi.org/10.5281/zenodo.17101166" ext-link-type="DOI">10.5281/zenodo.17101166</ext-link> <xref ref-type="bibr" rid="bib1.bibx35" id="paren.73"/>.</p>
  </notes><app-group>
        <supplementary-material position="anchor"><p id="d2e3290">The supplement related to this article is available online at <inline-supplementary-material xlink:href="https://doi.org/10.5194/bg-23-5607-2026-supplement" xlink:title="pdf">https://doi.org/10.5194/bg-23-5607-2026-supplement</inline-supplementary-material>.</p></supplementary-material>
        </app-group><notes notes-type="authorcontribution"><title>Author contributions</title>

      <p id="d2e3299">LK and TK conceived the ideas, designed the methodology, and led the analysis. TK, JP, RR, JF, LK, and DL collected the data. LK and TK led the writing of the manuscript. All authors contributed critically to the drafts and gave final approval for publication.</p>
  </notes><notes notes-type="competinginterests"><title>Competing interests</title>

      <p id="d2e3305">The contact author has declared that none of the authors has any competing interests.</p>
  </notes><notes notes-type="disclaimer"><title>Disclaimer</title>

      <p id="d2e3312">Publisher's note: Copernicus Publications remains neutral with regard to jurisdictional claims made in the text, published maps, institutional affiliations, or any other geographical representation in this paper. The authors bear the ultimate responsibility for providing appropriate place names. Views expressed in the text are those of the authors and do not necessarily reflect the views of the publisher.</p>
  </notes><notes notes-type="financialsupport"><title>Financial support</title>

      <p id="d2e3318">L.K. and T.K. received further funding from the German Research Foundation (DFG) under the projects PANOPS (project number 504978936) and the CRC 1537 ECOSENSE (project number 459819582). T.K. received funding from the Flexible Funds Program for junior scientists of the University of Leipzig (project number 232201582). T.K. and C.Wi. gratefully acknowledge the support of iDiv funded by the German Research Foundation (DFG–FZT 118, 202548816). T.K. and C.We. gratefully acknowledge funding from the Cluster of Excellence EXC 3127 Future Forests (project number 533786343), funded by the German Research Foundation (DFG) and the Eva Mayr-Stihl Foundation. J.P. was supported by the Estonian Research Council Grant PRG 1405 and the Estonian Ministry of Education and Research, Centre of Excellence for Sustainable Land Use (TK232).  This open-access publication was funded by the University of Freiburg.</p>
  </notes><notes notes-type="reviewstatement"><title>Review statement</title>

      <p id="d2e3327">This paper was edited by Mirco Migliavacca and reviewed by Dalei Hao and one anonymous referee.</p>
  </notes><ref-list>
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