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<front>
<journal-meta>
<journal-id journal-id-type="publisher">BGD</journal-id>
<journal-title-group>
<journal-title>Biogeosciences Discussions</journal-title>
<abbrev-journal-title abbrev-type="publisher">BGD</abbrev-journal-title>
<abbrev-journal-title abbrev-type="nlm-ta">Biogeosciences Discuss.</abbrev-journal-title>
</journal-title-group>
<issn pub-type="epub">1810-6285</issn>
<publisher><publisher-name></publisher-name>
<publisher-loc>Göttingen, Germany</publisher-loc>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.5194/bgd-10-12115-2013</article-id>
<title-group>
<article-title>Photophysiological state of natural phytoplankton communities in the South China Sea and Sulu Sea</article-title>
</title-group>
<contrib-group><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Cheah</surname>
<given-names>W.</given-names>
<ext-link>https://orcid.org/0000-0002-1824-0577</ext-link>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Taylor</surname>
<given-names>B. B.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Wiegmann</surname>
<given-names>S.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Raimund</surname>
<given-names>S.</given-names>
</name>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Krahmann</surname>
<given-names>G.</given-names>
</name>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Quack</surname>
<given-names>B.</given-names>
</name>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
</contrib>
<contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Bracher</surname>
<given-names>A.</given-names>
<ext-link>https://orcid.org/0000-0003-3025-5517</ext-link>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
</contrib>
</contrib-group><aff id="aff1">
<label>1</label>
<addr-line>Alfred-Wegener-Institute Helmholtz Centre for Polar and Marine Research, Bussestrasse 24, 27570 Bremerhaven, Germany</addr-line>
</aff>
<aff id="aff2">
<label>2</label>
<addr-line>Institute of Environmental Physics, University of Bremen, Otto-Hahn-Allee 1, 28359 Bremen, Germany</addr-line>
</aff>
<aff id="aff3">
<label>3</label>
<addr-line>GEOMAR Helmholtz Centre for Ocean Research Kiel, Düsternbrooker Weg 20, 24105 Kiel, Germany</addr-line>
</aff>
<funding-group>
<award-group id="gs1">
<funding-source>European Commission</funding-source>
<award-id>SHIVA - Stratospheric ozone: Halogen Impacts in a Varying Atmosphere (226224)</award-id>
</award-group>
</funding-group>
<pub-date pub-type="epub">
<day>19</day>
<month>07</month>
<year>2013</year>
</pub-date>
<volume>10</volume>
<issue>7</issue>
<fpage>12115</fpage>
<lpage>12153</lpage>
<permissions>
<copyright-statement>Copyright: &#x000a9; 2013 W. Cheah et al.</copyright-statement>
<copyright-year>2013</copyright-year>
<license license-type="open-access">
<license-p>This work is licensed under the Creative Commons Attribution 3.0 Unported License. To view a copy of this licence, visit <ext-link ext-link-type="uri"  xlink:href="https://creativecommons.org/licenses/by/3.0/">https://creativecommons.org/licenses/by/3.0/</ext-link></license-p>
</license>
</permissions>
<self-uri xlink:href="https://bg.copernicus.org/preprints/10/12115/2013/bgd-10-12115-2013.html">This article is available from https://bg.copernicus.org/preprints/10/12115/2013/bgd-10-12115-2013.html</self-uri>
<self-uri xlink:href="https://bg.copernicus.org/preprints/10/12115/2013/bgd-10-12115-2013.pdf">The full text article is available as a PDF file from https://bg.copernicus.org/preprints/10/12115/2013/bgd-10-12115-2013.pdf</self-uri>
<abstract>
<p>In recent years, an increasing number of studies on phytoplankton in
  the tropical South China Sea (SCS) and Sulu Sea (SS) have been
  conducted. However, still little is known about the
  photophysiological state of natural phytoplankton communities under
  varying environmental conditions. This study investigates the
  photophysiological state of natural phytoplankton communities in the
  southern SCS and SS based on high horizontal and vertical resolution
  field observations collected during the SHIVA (Stratosphere ozone:
  Halogens in a Varying Atmosphere) cruise (SO 218) in November 2011
  on board RV &lt;i&gt;Sonne&lt;/i&gt;. At the surface, pigment results revealed that
  total chlorophyll &lt;i&gt;a &lt;/i&gt; (TChl &lt;i&gt;a &lt;/i&gt;) concentrations at all offshore
  stations were low at the surface and were generally dominated by
  cyanobacteria. Enhanced concentrations of TChl &lt;i&gt;a &lt;/i&gt; were only
  observed below the upper mixed layer and above the euphotic depth
  with haptophytes, prochlorophytes and prasinophytes contributing
  most of the biomass. At stations close to the coast and river
  outflows, surface phytoplankton blooms (between 1 to
  2.2 mg m&lt;sup&gt;−3&lt;/sup&gt;) dominated by diatoms were observed. Overall, the
  study region exhibited strong nitrate + nitrite
  (NO&lt;sub&gt;x&lt;/sub&gt;, &lt; 1 &amp;mu;mol L&lt;sup&gt;−1&lt;/sup&gt;), and phosphate
  (PO&lt;sub&gt;4&lt;/sub&gt;, &lt; 0.2 &amp;mu;mol L&lt;sup&gt;−1&lt;/sup&gt;) depletion from
  surface down to about 50–60 m. Silicate (Si) exhibited similar
  trends with the exception of some near shore stations in which high
  Si concentrations (&gt; 2 &amp;mu;mol L&lt;sup&gt;−1&lt;/sup&gt;) were observed in
  conjunction with increased TChl &lt;i&gt;a &lt;/i&gt; and diatoms
  concentrations. Surface NO&lt;sub&gt;x&lt;/sub&gt; concentrations were
  observed to correlate positively with temperature (&amp;tau; = 0.22, &lt;i&gt;p&lt;/i&gt;
  &lt; 0.05, &lt;i&gt;n&lt;/i&gt; = 108), whereas negative correlations were reported
  between surface NO&lt;sub&gt;x&lt;/sub&gt; (&amp;tau; = &amp;minus;0.27, &lt;i&gt;p&lt;/i&gt; &lt; 0.05, &lt;i&gt;n&lt;/i&gt; =
  108), Si (&amp;tau; = &amp;minus;0.68, &lt;i&gt;p&lt;/i&gt; &lt; 0.05, &lt;i&gt;n&lt;/i&gt; = 108) and salinity
  indicating that the enhancement in nutrients at the surface was
  probably supplied through fresher and warmer river waters near the
  coast. In contrast, the opposite was observed between temperature,
  salinity and all nutrients in the water column suggesting that
  nutrients were supplied from the bottom through upwelling. Pigment
  gradients show that phytoplankton were optimising their pigment
  composition to acclimate to changes in the light climate and cells
  were in a competent state as suggested by high maximum photochemical
  efficiency values (&lt;i&gt;F&lt;/i&gt;&lt;sub&gt;v&lt;/sub&gt;/ F&lt;sub&gt;m&lt;/sub&gt;, &gt; 0.4).</p>
</abstract>
<counts><page-count count="39"/></counts>
</article-meta>
</front>
<body/>
<back>
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