Articles | Volume 12, issue 14
https://doi.org/10.5194/bg-12-4447-2015
© Author(s) 2015. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
https://doi.org/10.5194/bg-12-4447-2015
© Author(s) 2015. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
Capturing optically important constituents and properties in a marine biogeochemical and ecosystem model
S. Dutkiewicz
CORRESPONDING AUTHOR
Center for Global Change Science and Department of Earth, Atmospheric and Planetary Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139, USA
A. E. Hickman
Ocean and Earth Science, University of Southampton, National Oceanography Centre Southampton, Southampton, SO14 3ZH, UK
Department of Earth, Atmospheric and Planetary Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139, USA
W. W. Gregg
Global Modeling and Assimilation Office, NASA Goddard Space Flight Center, Greenbelt, MD 20771 USA
C. B. Mouw
Department of Geological and Mining Engineering and Sciences, Michigan Technological University, Houghton, MI 49931, USA
M. J. Follows
Department of Earth, Atmospheric and Planetary Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139, USA
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- Influence of diatom diversity on the ocean biological carbon pump P. Tréguer et al. 10.1038/s41561-017-0028-x
- Directional and Spectral Irradiance in Ocean Models: Effects on Simulated Global Phytoplankton, Nutrients, and Primary Production W. Gregg & C. Rousseaux 10.3389/fmars.2016.00240
- Merging bio-optical data from Biogeochemical-Argo floats and models in marine biogeochemistry E. Terzić et al. 10.5194/bg-16-2527-2019
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- Quantifying the biological impact of surface ocean light attenuation by colored detrital matter in an ESM using a new optical parameterization G. Kim et al. 10.5194/bg-12-5119-2015
- Zooplankton grazing is the largest source of uncertainty for marine carbon cycling in CMIP6 models T. Rohr et al. 10.1038/s43247-023-00871-w
- Phytoplankton diversity emerging from chromatic adaptation and competition for light E. Álvarez et al. 10.1016/j.pocean.2022.102789
- Use of remote-sensing reflectance to constrain a data assimilating marine biogeochemical model of the Great Barrier Reef E. Jones et al. 10.5194/bg-13-6441-2016
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- Heterogeneous nitrogen fixation rates confer energetic advantage and expanded ecological niche of unicellular diazotroph populations T. Masuda et al. 10.1038/s42003-020-0894-4
- Plankton energy flows using a global size-structured and trait-based model G. Negrete-García et al. 10.1016/j.pocean.2022.102898
- Phytoplankton Light Absorption Impacted by Photoprotective Carotenoids in a Global Ocean Spectrally‐Resolved Biogeochemistry Model E. Álvarez et al. 10.1029/2022MS003126
- Information content of absorption spectra and implications for ocean color inversion B. Cael et al. 10.1364/AO.389189
- Modeling Photosynthesis and Exudation in Subtropical Oceans Z. Wu et al. 10.1029/2021GB006941
- Coexistence of Dominant Marine Phytoplankton Sustained by Nutrient Specialization T. Masuda et al. 10.1128/spectrum.04000-22
- Crocosphaera watsonii – A widespread nitrogen‐fixing unicellular marine cyanobacterium T. Masuda et al. 10.1111/jpy.13450
- How well do global ocean biogeochemistry models simulate dissolved iron distributions? A. Tagliabue et al. 10.1002/2015GB005289
- Net primary productivity estimates and environmental variables in the Arctic Ocean: An assessment of coupled physical-biogeochemical models Y. Lee et al. 10.1002/2016JC011993
- Using ecological partitions to assess zooplankton biogeography and seasonality N. McGinty et al. 10.3389/fmars.2023.989770
- Ocean mover’s distance: using optimal transport for analysing oceanographic data S. Hyun et al. 10.1098/rspa.2021.0875
- An interactive ocean surface albedo scheme (OSAv1.0): formulation and evaluation in ARPEGE-Climat (V6.1) and LMDZ (V5A) R. Séférian et al. 10.5194/gmd-11-321-2018
- Attribution of Space‐Time Variability in Global‐Ocean Dissolved Inorganic Carbon D. Carroll et al. 10.1029/2021GB007162
- Patterns of siderophore production and utilization at Station ALOHA from the surface to mesopelagic waters R. Bundy et al. 10.1002/lno.12746
- Obtaining Phytoplankton Diversity from Ocean Color: A Scientific Roadmap for Future Development A. Bracher et al. 10.3389/fmars.2017.00055
- Biochemical diversity of glycosphingolipid biosynthesis as a driver of Coccolithovirus competitive ecology J. Nissimov et al. 10.1111/1462-2920.14633
- The distribution of mycosporine-like amino acids in phytoplankton across a Southern Ocean transect E. Weiss et al. 10.3389/fmars.2022.1022957
- Simons Collaborative Marine Atlas Project (Simons CMAP): An open‐source portal to share, visualize, and analyze ocean data M. Ashkezari et al. 10.1002/lom3.10439
- The Fundamental Contribution of Phytoplankton Spectral Scattering to Ocean Colour: Implications for Satellite Detection of Phytoplankton Community Structure L. Lain & S. Bernard 10.3390/app8122681
- Primary production sensitivity to phytoplankton light attenuation parameter increases with transient forcing K. Kvale & K. Meissner 10.5194/bg-14-4767-2017
- Self‐Shading and Meltwater Spreading Control the Transition From Light to Iron Limitation in an Antarctic Coastal Polynya A. Twelves et al. 10.1029/2020JC016636
- Optical model for the Baltic Sea with an explicit CDOM state variable: a case study with Model ERGOM (version 1.2) T. Neumann et al. 10.5194/gmd-14-5049-2021
- Physical and Biological Controls of the Drake Passage pCO2 Variability A. Jersild & T. Ito 10.1029/2020GB006644
- Global Assimilation of Ocean‐Color Data of Phytoplankton Functional Types: Impact of Different Data Sets H. Pradhan et al. 10.1029/2019JC015586
- A General Multilayer Analytical Radiative Transfer-Based Model for Reflectance Over Shallow Water J. Zhang et al. 10.1109/TGRS.2024.3389683
- Reconciling the Size‐Dependence of Marine Particle Sinking Speed B. Cael et al. 10.1029/2020GL091771
- Reviews and syntheses: The biogeochemical cycle of silicon in the modern ocean P. Tréguer et al. 10.5194/bg-18-1269-2021
- Exploring biogeochemical and ecological redundancy in phytoplankton communities in the global ocean S. Dutkiewicz et al. 10.1111/gcb.15493
- Ocean colour signature of climate change S. Dutkiewicz et al. 10.1038/s41467-019-08457-x
- Magnitude, Trends, and Variability of the Global Ocean Carbon Sink From 1985 to 2018 T. DeVries et al. 10.1029/2023GB007780
- Impact of phytoplankton, CDOM, and suspended sediments on the vertical attenuation of light, changing heat content and circulation on a continental shelf: A modelling study of the Great Barrier Reef A. Maggiorano et al. 10.1016/j.ocemod.2024.102465
- Mesoscale Eddies Regulate Seasonal Iron Supply and Carbon Drawdown in the Drake Passage A. Jersild et al. 10.1029/2021GL096020
- Biogeochemical River Runoff Drives Intense Coastal Arctic Ocean CO2 Outgassing C. Bertin et al. 10.1029/2022GL102377
- Global patterns in marine organic matter stoichiometry driven by phytoplankton ecophysiology K. Inomura et al. 10.1038/s41561-022-01066-2
- Better together? Lessons on sociality from Trichodesmium M. Eichner et al. 10.1016/j.tim.2023.05.001
- Mesoscale Eddy Modulation of Subsurface Chlorophyll Maximum Layers in the South China Sea W. Xu et al. 10.1029/2023JG007648
- Using Probability Density Functions to Evaluate Models (PDFEM, v1.0) to compare a biogeochemical model with satellite-derived chlorophyll B. Jönsson et al. 10.5194/gmd-16-4639-2023
- Characterizing CDOM Spectral Variability Across Diverse Regions and Spectral Ranges B. Grunert et al. 10.1002/2017GB005756
- Constraining uncertainties of diazotroph biogeography from nifH gene abundance S. Meiler et al. 10.1002/lno.12036
- Chromophoric dissolved organic matter dynamics revealed through the optimization of an optical–biogeochemical model in the northwestern Mediterranean Sea E. Álvarez et al. 10.5194/bg-20-4591-2023
- Observation and simulation of the diffuse attenuation coefficient of downwelling irradiance in the Polar Ocean W. Wang et al. 10.1007/s11430-022-1093-5
- The Oceans’ Biological Carbon Pumps: Framework for a Research Observational Community Approach H. Claustre et al. 10.3389/fmars.2021.780052
- Response of phytoplankton functional types to Hurricane Fabian (2003) in the Sargasso Sea D. Avila-Alonso et al. 10.1016/j.marenvres.2023.106079
- Recommendations for the formulation of grazing in marine biogeochemical and ecosystem models T. Rohr et al. 10.1016/j.pocean.2022.102878
- Upwelling and nutrient dynamics in the Arabian Gulf and sea of Oman K. Ismail et al. 10.1371/journal.pone.0276260
- Spring bloom onset in the Nordic Seas A. Mignot et al. 10.5194/bg-13-3485-2016
- Developing a Community of Practice for Applied Uses of Future PACE Data to Address Marine Food Security Challenges S. Schollaert Uz et al. 10.3389/feart.2019.00283
- Amplified Arctic Surface Warming and Sea Ice Loss Due to Phytoplankton and Colored Dissolved Material V. Pefanis et al. 10.1029/2020GL088795
- Simulating PACE Global Ocean Radiances W. Gregg & C. Rousseaux 10.3389/fmars.2017.00060
- Biogeochemical Dynamics in Adjacent Mesoscale Eddies of Opposite Polarity B. Barone et al. 10.1029/2021GB007115
- Modulation of the Intraseasonal Chlorophyll‐a Concentration in the Tropical Indian Ocean by the Central Indian Ocean Mode J. Qin et al. 10.1029/2022GL097802
- Satellite Ocean Colour: Current Status and Future Perspective S. Groom et al. 10.3389/fmars.2019.00485
- Spatial distribution of marine atmospheric isoprene in the Southern Hemisphere: Role of atmospheric removal capacity X. Yu et al. 10.1016/j.atmosenv.2022.119414
- Estimating the seasonal impact of optically significant water constituents on surface heating rates in the western Baltic Sea B. Cahill et al. 10.5194/bg-20-2743-2023
- Controls on the relative abundances and rates of nitrifying microorganisms in the ocean E. Zakem et al. 10.5194/bg-19-5401-2022
- Elucidating ecological complexity: Unsupervised learning determines global marine eco-provinces M. Sonnewald et al. 10.1126/sciadv.aay4740
- Coupling ecological concepts with an ocean-colour model: Parameterisation and forward modelling X. Sun et al. 10.1016/j.rse.2024.114487
- Effects of spectral light quality on the growth, productivity, and elemental ratios in differently pigmented marine phytoplankton species T. Bercel & S. Kranz 10.1007/s10811-021-02653-3
- The role of differential DMSP production and community composition in predicting variability of global surface DMSP concentrations E. McParland & N. Levine 10.1002/lno.11076
- An optimal transformation method applied to diagnose the ocean carbon budget N. Mackay et al. 10.5194/gmd-17-5987-2024
- The effect of iron limitation on cyanobacteria major nutrient and trace element stoichiometry B. Cunningham & S. John 10.1002/lno.10484
- Retrieval of Chlorophyll-a concentration and associated product uncertainty in optically diverse lakes and reservoirs X. Liu et al. 10.1016/j.rse.2021.112710
- Light penetration in a temperate meso-tidal lagoon: Implications for seagrass growth and dredging in Tauranga Harbour, New Zealand M. Cussioli et al. 10.1016/j.ocecoaman.2019.01.014
- Phytoplankton optical fingerprint libraries for development of phytoplankton ocean color satellite products M. Lomas et al. 10.1038/s41597-024-03001-z
- Increased Surface Ocean Heating by Colored Detrital Matter (CDM) Linked to Greater Northern Hemisphere Ice Formation in the GFDL CM2Mc ESM G. Kim et al. 10.1175/JCLI-D-16-0053.1
- Performance metrics for the assessment of satellite data products: an ocean color case study B. Seegers et al. 10.1364/OE.26.007404
- Abrupt shifts in 21st-century plankton communities B. Cael et al. 10.1126/sciadv.abf8593
- Deriving inherent optical properties from decomposition of hyperspectral non-water absorption B. Grunert et al. 10.1016/j.rse.2019.03.004
- Applications of biogeochemical models in different marine environments: a review K. Ismail & M. Al-Shehhi 10.3389/fenvs.2023.1198856
- Global climate-change trends detected in indicators of ocean ecology B. Cael et al. 10.1038/s41586-023-06321-z
- Active nitrogen fixation by Crocosphaera expands their niche despite the presence of ammonium – A case study K. Inomura et al. 10.1038/s41598-019-51378-4
- Towards modeling growth rates of cyanobacteria in the Baltic Sea M. Stramska et al. 10.1016/j.ecss.2020.106853
- Exploring controls on the timing of the phytoplankton bloom in western Baffin Bay, Canadian Arctic M. Benoît-Gagné et al. 10.1525/elementa.2024.00008
- MITgcm.jl: a Julia Interface to the MITgcm G. Forget 10.21105/joss.06710
- An Empirically Derived Trimodal Parameterization of Underwater Light in Complex Coastal Waters – A Case Study in the North Sea J. Wollschläger et al. 10.3389/fmars.2020.00512
- Moving ecological and biogeochemical transitions across the North Pacific C. Follett et al. 10.1002/lno.11763
- An overview of approaches and challenges for retrieving marine inherent optical properties from ocean color remote sensing P. Werdell et al. 10.1016/j.pocean.2018.01.001
- Evaluating ecosystem model complexity for the northwest North Atlantic through surrogate-based optimization A. Kuhn & K. Fennel 10.1016/j.ocemod.2019.101437
- Trophic interactions with heterotrophic bacteria limit the range of Prochlorococcus C. Follett et al. 10.1073/pnas.2110993118
- A Mechanistic Model of Macromolecular Allocation, Elemental Stoichiometry, and Growth Rate in Phytoplankton K. Inomura et al. 10.3389/fmicb.2020.00086
- Phytoplankton Dynamics and Biogeochemistry of the Black Sea V. Silkin et al. 10.3390/jmse11061196
- Improving the Retrieval of Carbon-Based Phytoplankton Biomass from Satellite Ocean Colour Observations M. Bellacicco et al. 10.3390/rs12213640
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- Effects of African dust deposition on phytoplankton in the western tropical Atlantic Ocean off Barbados C. Chien et al. 10.1002/2015GB005334
- Remote-sensing reflectance and true colour produced by a coupled hydrodynamic, optical, sediment, biogeochemical model of the Great Barrier Reef, Australia: Comparison with satellite data M. Baird et al. 10.1016/j.envsoft.2015.11.025
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Latest update: 13 Dec 2024
Short summary
A numerical model is presented that explicitly includes spectral
irradiance and optically important water constituents. The model captures 3-D
biogeochemical, ecosystem, and optical observations, including surface
reflectance analogous to ocean colour satellite observations. Sensitivity
experiments demonstrate the relative importance of each of the water
constituents, and the feedbacks between the light field, fitness of
phytoplankton types, and the biogeochemistry of the ocean.
A numerical model is presented that explicitly includes spectral
irradiance and optically...
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