Articles | Volume 12, issue 24
https://doi.org/10.5194/bg-12-7435-2015
© Author(s) 2015. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
https://doi.org/10.5194/bg-12-7435-2015
© Author(s) 2015. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
Research article
| 
17 Dec 2015
Research article |
| 17 Dec 2015
Diazotroph community succession during the VAHINE mesocosm experiment (New Caledonia lagoon)
K. A. Turk-Kubo
CORRESPONDING AUTHOR
Ocean Sciences Department, University of California, Santa Cruz, 1156 High Street, Santa Cruz, CA, 95064, USA
I. E. Frank
Ocean Sciences Department, University of California, Santa Cruz, 1156 High Street, Santa Cruz, CA, 95064, USA
M. E. Hogan
Ocean Sciences Department, University of California, Santa Cruz, 1156 High Street, Santa Cruz, CA, 95064, USA
A. Desnues
Mediterranean Institute of Oceanography (MIO) – IRD/CNRS/Aix-Marseille University, IRD Noumea, 101 Promenade R. Laroque, BPA5, 98848 Noumea Cedex, France
S. Bonnet
Mediterranean Institute of Oceanography (MIO) – IRD/CNRS/Aix-Marseille University, IRD Noumea, 101 Promenade R. Laroque, BPA5, 98848 Noumea Cedex, France
J. P. Zehr
Ocean Sciences Department, University of California, Santa Cruz, 1156 High Street, Santa Cruz, CA, 95064, USA
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Cited
53 citations as recorded by crossref.
- Contribution and pathways of diazotroph-derived nitrogen to zooplankton during the VAHINE mesocosm experiment in the oligotrophic New Caledonia lagoon B. Hunt et al. 10.5194/bg-13-3131-2016
- Dynamics of N2 fixation and fate of diazotroph-derived nitrogen in a low-nutrient, low-chlorophyll ecosystem: results from the VAHINE mesocosm experiment (New Caledonia) S. Bonnet et al. 10.5194/bg-13-2653-2016
- Global biogeography of N2-fixing microbes: nifH amplicon database and analytics workflow M. Morando et al. 10.5194/essd-17-393-2025
- Processes and Microorganisms Involved in the Marine Nitrogen Cycle: Knowledge and Gaps S. Pajares & R. Ramos 10.3389/fmars.2019.00739
- Succession within the prokaryotic communities during the VAHINE mesocosms experiment in the New Caledonia lagoon U. Pfreundt et al. 10.5194/bg-13-2319-2016
- Heterotrophic bacterial production and metabolic balance during the VAHINE mesocosm experiment in the New Caledonia lagoon F. Van Wambeke et al. 10.5194/bg-13-3187-2016
- Microbiome of Trichodesmium Colonies from the North Pacific Subtropical Gyre M. Gradoville et al. 10.3389/fmicb.2017.01122
- Grazing mortality as a controlling factor in the uncultured non-cyanobacterial diazotroph (Gamma A) around the Kuroshio region T. Sato et al. 10.5194/bg-22-625-2025
- Highly heterogeneous diazotroph communities in the Kuroshio Current and the Tokara Strait, Japan S. Cheung et al. 10.1371/journal.pone.0186875
- Biogeochemical and biological impacts of diazotroph blooms in a low-nutrient, low-chlorophyll ecosystem: synthesis from the VAHINE mesocosm experiment (New Caledonia) S. Bonnet et al. 10.5194/bg-13-4461-2016
- In Situ Diazotroph Population Dynamics Under Different Resource Ratios in the North Pacific Subtropical Gyre K. Turk-Kubo et al. 10.3389/fmicb.2018.01616
- Transfer of diazotroph-derived nitrogen towards non-diazotrophic planktonic communities: a comparative study between Trichodesmium erythraeum, Crocosphaera watsonii and Cyanothece sp. H. Berthelot et al. 10.5194/bg-13-4005-2016
- Dissolved Organic Matter Influences N2 Fixation in the New Caledonian Lagoon (Western Tropical South Pacific) M. Benavides et al. 10.3389/fmars.2018.00089
- Diversity and Activity of Diazotrophs in Great Barrier Reef Surface Waters L. Messer et al. 10.3389/fmicb.2017.00967
- Distinct ecological niches of marine symbiotic N2‐fixing cyanobacterium Candidatus Atelocyanobacterium thalassa sublineages K. Turk‐Kubo et al. 10.1111/jpy.12505
- Phytoplankton community structure in the VAHINE mesocosm experiment K. Leblanc et al. 10.5194/bg-13-5205-2016
- Global analysis of gene expression dynamics within the marine microbial community during the VAHINE mesocosm experiment in the southwest Pacific U. Pfreundt et al. 10.5194/bg-13-4135-2016
- Distributions and Abundances of Sublineages of the N2-Fixing Cyanobacterium Candidatus Atelocyanobacterium thalassa (UCYN-A) in the New Caledonian Coral Lagoon B. Henke et al. 10.3389/fmicb.2018.00554
- Diazotrophs are overlooked contributors to carbon and nitrogen export to the deep ocean S. Bonnet et al. 10.1038/s41396-022-01319-3
- Distribution and drivers of symbiotic and free-living diazotrophic cyanobacteria in the western tropical South Pacific M. Stenegren et al. 10.5194/bg-15-1559-2018
- Temporal variability of diazotroph community composition in the upwelling region off NW Iberia V. Moreira-Coello et al. 10.1038/s41598-019-39586-4
- Piecewise Structural Equation Model (SEM) Disentangles the Environmental Conditions Favoring Diatom Diazotroph Associations (DDAs) in the Western Tropical North Atlantic (WTNA) M. Stenegren et al. 10.3389/fmicb.2017.00810
- Introduction to the project VAHINE: VAriability of vertical and tropHIc transfer of diazotroph derived N in the south wEst Pacific S. Bonnet et al. 10.5194/bg-13-2803-2016
- New insights into the ecology of the globally significant uncultured nitrogen-fixing symbiont UCYN-A H. Farnelid et al. 10.3354/ame01794
- Non-cyanobacterial diazotrophs: global diversity, distribution, ecophysiology, and activity in marine waters K. Turk-Kubo et al. 10.1093/femsre/fuac046
- Mechanisms of Trichodesmium demise within the New Caledonian lagoon during the VAHINE mesocosm experiment D. Spungin et al. 10.5194/bg-13-4187-2016
- Unexpected presence of the nitrogen‐fixing symbiotic cyanobacterium UCYN‐A in Monterey Bay, California A. Cabello et al. 10.1111/jpy.13045
- Diazotrophs: a non-negligible source of nitrogen for the tropical coral Stylophora pistillata M. Benavides et al. 10.1242/jeb.139451
- Unusual marine unicellular symbiosis with the nitrogen-fixing cyanobacterium UCYN-A J. Zehr et al. 10.1038/nmicrobiol.2016.214
- Diverse diazotrophs are present on sinking particles in the North Pacific Subtropical Gyre H. Farnelid et al. 10.1038/s41396-018-0259-x
- The balance between photosynthesis and respiration explains the niche differentiation between Crocosphaera and Cyanothece T. Masuda et al. 10.1016/j.csbj.2022.11.029
- Seasonal Shifts in Diazotrophs Players: Patterns Observed Over a Two-Year Time Series in the New Caledonian Lagoon (Western Tropical South Pacific Ocean) E. Saulia et al. 10.3389/fmars.2020.581755
- Biogeochemical fluxes and fate of diazotroph-derived nitrogen in the food web after a phosphate enrichment: modeling of the VAHINE mesocosms experiment A. Gimenez et al. 10.5194/bg-13-5103-2016
- Review of Marine Cyanobacteria and the Aspects Related to Their Roles: Chemical, Biological Properties, Nitrogen Fixation and Climate Change H. El-Seedi et al. 10.3390/md21080439
- Modelling the biogeochemical effects of heterotrophic and autotrophic N2 fixation in the Gulf of Aqaba (Israel), Red Sea A. Kuhn et al. 10.5194/bg-15-7379-2018
- Natural iron fertilization by shallow hydrothermal sources fuels diazotroph blooms in the ocean S. Bonnet et al. 10.1126/science.abq4654
- Seasonal and spatial patterns in diazotroph community composition at Station ALOHA K. Turk-Kubo et al. 10.3389/fmars.2023.1130158
- Programmed cell death in diazotrophs and the fate of organic matter in the western tropical South Pacific Ocean during the OUTPACE cruise D. Spungin et al. 10.5194/bg-15-3893-2018
- Mesozooplankton Graze on Cyanobacteria in the Amazon River Plume and Western Tropical North Atlantic B. Conroy et al. 10.3389/fmicb.2017.01436
- Dynamics of transparent exopolymer particles (TEP) during the VAHINE mesocosm experiment in the New Caledonian lagoon I. Berman-Frank et al. 10.5194/bg-13-3793-2016
- Nitrogen isotopic evidence for a shift from nitrate- to diazotroph-fueled export production in the VAHINE mesocosm experiments A. Knapp et al. 10.5194/bg-13-4645-2016
- Evolution of dissolved and particulate chromophoric materials during the VAHINE mesocosm experiment in the New Caledonian coral lagoon (south-west Pacific) M. Tedetti et al. 10.5194/bg-13-3283-2016
- Diazotroph Diversity in the Sea Ice, Melt Ponds, and Surface Waters of the Eurasian Basin of the Central Arctic Ocean M. Fernández-Méndez et al. 10.3389/fmicb.2016.01884
- Bleaching forces coral’s heterotrophy on diazotrophs and Synechococcus V. Meunier et al. 10.1038/s41396-019-0456-2
- Pelagic ecosystem research incubators (PERIcosms): optimized incubation tanks to investigate natural communities under long term, low nutrient, and low metal conditions E. Seelen et al. 10.1002/lom3.10628
- Transportation of Diazotroph Community From the Upstream to Downstream of the Kuroshio S. Cheung et al. 10.1029/2018JG004960
- Diazotrophs: Overlooked Key Players within the Coral Symbiosis and Tropical Reef Ecosystems? M. Benavides et al. 10.3389/fmars.2017.00010
- Understanding nitrogen dynamics in coral holobionts: comprehensive review of processes, advancements, gaps, and future directions M. Li et al. 10.3389/fmars.2023.1203399
- Coral reef ecological pump for gathering and retaining nutrients and exporting carbon: a review and perspectives L. Zhou et al. 10.1007/s13131-022-2130-1
- Biogeographic drivers of diazotrophs in the western Pacific Ocean M. Chen et al. 10.1002/lno.11123
- Integrating Stochastic and Deterministic Process in the Biogeography of N2-Fixing Cyanobacterium Candidatus Atelocyanobacterium Thalassa L. Li et al. 10.3389/fmicb.2021.654646
- Diazotroph-Derived Nitrogen Assimilation Strategies Differ by Scleractinian Coral Species V. Meunier et al. 10.3389/fmars.2021.692248
- Released coral mucus does not enhance planktonic N2 fixation rates M. Camps et al. 10.3354/ame01787
51 citations as recorded by crossref.
- Contribution and pathways of diazotroph-derived nitrogen to zooplankton during the VAHINE mesocosm experiment in the oligotrophic New Caledonia lagoon B. Hunt et al. 10.5194/bg-13-3131-2016
- Dynamics of N2 fixation and fate of diazotroph-derived nitrogen in a low-nutrient, low-chlorophyll ecosystem: results from the VAHINE mesocosm experiment (New Caledonia) S. Bonnet et al. 10.5194/bg-13-2653-2016
- Global biogeography of N2-fixing microbes: nifH amplicon database and analytics workflow M. Morando et al. 10.5194/essd-17-393-2025
- Processes and Microorganisms Involved in the Marine Nitrogen Cycle: Knowledge and Gaps S. Pajares & R. Ramos 10.3389/fmars.2019.00739
- Succession within the prokaryotic communities during the VAHINE mesocosms experiment in the New Caledonia lagoon U. Pfreundt et al. 10.5194/bg-13-2319-2016
- Heterotrophic bacterial production and metabolic balance during the VAHINE mesocosm experiment in the New Caledonia lagoon F. Van Wambeke et al. 10.5194/bg-13-3187-2016
- Microbiome of Trichodesmium Colonies from the North Pacific Subtropical Gyre M. Gradoville et al. 10.3389/fmicb.2017.01122
- Grazing mortality as a controlling factor in the uncultured non-cyanobacterial diazotroph (Gamma A) around the Kuroshio region T. Sato et al. 10.5194/bg-22-625-2025
- Highly heterogeneous diazotroph communities in the Kuroshio Current and the Tokara Strait, Japan S. Cheung et al. 10.1371/journal.pone.0186875
- Biogeochemical and biological impacts of diazotroph blooms in a low-nutrient, low-chlorophyll ecosystem: synthesis from the VAHINE mesocosm experiment (New Caledonia) S. Bonnet et al. 10.5194/bg-13-4461-2016
- In Situ Diazotroph Population Dynamics Under Different Resource Ratios in the North Pacific Subtropical Gyre K. Turk-Kubo et al. 10.3389/fmicb.2018.01616
- Transfer of diazotroph-derived nitrogen towards non-diazotrophic planktonic communities: a comparative study between Trichodesmium erythraeum, Crocosphaera watsonii and Cyanothece sp. H. Berthelot et al. 10.5194/bg-13-4005-2016
- Dissolved Organic Matter Influences N2 Fixation in the New Caledonian Lagoon (Western Tropical South Pacific) M. Benavides et al. 10.3389/fmars.2018.00089
- Diversity and Activity of Diazotrophs in Great Barrier Reef Surface Waters L. Messer et al. 10.3389/fmicb.2017.00967
- Distinct ecological niches of marine symbiotic N2‐fixing cyanobacterium Candidatus Atelocyanobacterium thalassa sublineages K. Turk‐Kubo et al. 10.1111/jpy.12505
- Phytoplankton community structure in the VAHINE mesocosm experiment K. Leblanc et al. 10.5194/bg-13-5205-2016
- Global analysis of gene expression dynamics within the marine microbial community during the VAHINE mesocosm experiment in the southwest Pacific U. Pfreundt et al. 10.5194/bg-13-4135-2016
- Distributions and Abundances of Sublineages of the N2-Fixing Cyanobacterium Candidatus Atelocyanobacterium thalassa (UCYN-A) in the New Caledonian Coral Lagoon B. Henke et al. 10.3389/fmicb.2018.00554
- Diazotrophs are overlooked contributors to carbon and nitrogen export to the deep ocean S. Bonnet et al. 10.1038/s41396-022-01319-3
- Distribution and drivers of symbiotic and free-living diazotrophic cyanobacteria in the western tropical South Pacific M. Stenegren et al. 10.5194/bg-15-1559-2018
- Temporal variability of diazotroph community composition in the upwelling region off NW Iberia V. Moreira-Coello et al. 10.1038/s41598-019-39586-4
- Piecewise Structural Equation Model (SEM) Disentangles the Environmental Conditions Favoring Diatom Diazotroph Associations (DDAs) in the Western Tropical North Atlantic (WTNA) M. Stenegren et al. 10.3389/fmicb.2017.00810
- Introduction to the project VAHINE: VAriability of vertical and tropHIc transfer of diazotroph derived N in the south wEst Pacific S. Bonnet et al. 10.5194/bg-13-2803-2016
- New insights into the ecology of the globally significant uncultured nitrogen-fixing symbiont UCYN-A H. Farnelid et al. 10.3354/ame01794
- Non-cyanobacterial diazotrophs: global diversity, distribution, ecophysiology, and activity in marine waters K. Turk-Kubo et al. 10.1093/femsre/fuac046
- Mechanisms of Trichodesmium demise within the New Caledonian lagoon during the VAHINE mesocosm experiment D. Spungin et al. 10.5194/bg-13-4187-2016
- Unexpected presence of the nitrogen‐fixing symbiotic cyanobacterium UCYN‐A in Monterey Bay, California A. Cabello et al. 10.1111/jpy.13045
- Diazotrophs: a non-negligible source of nitrogen for the tropical coral Stylophora pistillata M. Benavides et al. 10.1242/jeb.139451
- Unusual marine unicellular symbiosis with the nitrogen-fixing cyanobacterium UCYN-A J. Zehr et al. 10.1038/nmicrobiol.2016.214
- Diverse diazotrophs are present on sinking particles in the North Pacific Subtropical Gyre H. Farnelid et al. 10.1038/s41396-018-0259-x
- The balance between photosynthesis and respiration explains the niche differentiation between Crocosphaera and Cyanothece T. Masuda et al. 10.1016/j.csbj.2022.11.029
- Seasonal Shifts in Diazotrophs Players: Patterns Observed Over a Two-Year Time Series in the New Caledonian Lagoon (Western Tropical South Pacific Ocean) E. Saulia et al. 10.3389/fmars.2020.581755
- Biogeochemical fluxes and fate of diazotroph-derived nitrogen in the food web after a phosphate enrichment: modeling of the VAHINE mesocosms experiment A. Gimenez et al. 10.5194/bg-13-5103-2016
- Review of Marine Cyanobacteria and the Aspects Related to Their Roles: Chemical, Biological Properties, Nitrogen Fixation and Climate Change H. El-Seedi et al. 10.3390/md21080439
- Modelling the biogeochemical effects of heterotrophic and autotrophic N2 fixation in the Gulf of Aqaba (Israel), Red Sea A. Kuhn et al. 10.5194/bg-15-7379-2018
- Natural iron fertilization by shallow hydrothermal sources fuels diazotroph blooms in the ocean S. Bonnet et al. 10.1126/science.abq4654
- Seasonal and spatial patterns in diazotroph community composition at Station ALOHA K. Turk-Kubo et al. 10.3389/fmars.2023.1130158
- Programmed cell death in diazotrophs and the fate of organic matter in the western tropical South Pacific Ocean during the OUTPACE cruise D. Spungin et al. 10.5194/bg-15-3893-2018
- Mesozooplankton Graze on Cyanobacteria in the Amazon River Plume and Western Tropical North Atlantic B. Conroy et al. 10.3389/fmicb.2017.01436
- Dynamics of transparent exopolymer particles (TEP) during the VAHINE mesocosm experiment in the New Caledonian lagoon I. Berman-Frank et al. 10.5194/bg-13-3793-2016
- Nitrogen isotopic evidence for a shift from nitrate- to diazotroph-fueled export production in the VAHINE mesocosm experiments A. Knapp et al. 10.5194/bg-13-4645-2016
- Evolution of dissolved and particulate chromophoric materials during the VAHINE mesocosm experiment in the New Caledonian coral lagoon (south-west Pacific) M. Tedetti et al. 10.5194/bg-13-3283-2016
- Diazotroph Diversity in the Sea Ice, Melt Ponds, and Surface Waters of the Eurasian Basin of the Central Arctic Ocean M. Fernández-Méndez et al. 10.3389/fmicb.2016.01884
- Bleaching forces coral’s heterotrophy on diazotrophs and Synechococcus V. Meunier et al. 10.1038/s41396-019-0456-2
- Pelagic ecosystem research incubators (PERIcosms): optimized incubation tanks to investigate natural communities under long term, low nutrient, and low metal conditions E. Seelen et al. 10.1002/lom3.10628
- Transportation of Diazotroph Community From the Upstream to Downstream of the Kuroshio S. Cheung et al. 10.1029/2018JG004960
- Diazotrophs: Overlooked Key Players within the Coral Symbiosis and Tropical Reef Ecosystems? M. Benavides et al. 10.3389/fmars.2017.00010
- Understanding nitrogen dynamics in coral holobionts: comprehensive review of processes, advancements, gaps, and future directions M. Li et al. 10.3389/fmars.2023.1203399
- Coral reef ecological pump for gathering and retaining nutrients and exporting carbon: a review and perspectives L. Zhou et al. 10.1007/s13131-022-2130-1
- Biogeographic drivers of diazotrophs in the western Pacific Ocean M. Chen et al. 10.1002/lno.11123
- Integrating Stochastic and Deterministic Process in the Biogeography of N2-Fixing Cyanobacterium Candidatus Atelocyanobacterium Thalassa L. Li et al. 10.3389/fmicb.2021.654646
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Latest update: 31 Mar 2025
Short summary
-A shift from diatom-associated diazotrophs (DDAs) to unicellular cyanobacterial group C (UCYN-C) in response to DIP fertilization was captured in a large-scale mesocosm experiment in the Noumea lagoon (NL), a low-nutrient low-chlorophyll coastal environment. -First report of in situ net growth and mortality rates for unicellular diazotrophs UCYN-A2, and UCYN-C. -First quantitative abundance data for diazotrophs in NL indicate that DDAs and UCYN-A1/A2 may be important N2 fixers in this region.
-A shift from diatom-associated diazotrophs (DDAs) to unicellular cyanobacterial group C...
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