Articles | Volume 3, issue 3
https://doi.org/10.5194/bg-3-311-2006
© Author(s) 2006. This work is licensed under
the Creative Commons Attribution-NonCommercial-ShareAlike 2.5 License.
the Creative Commons Attribution-NonCommercial-ShareAlike 2.5 License.
https://doi.org/10.5194/bg-3-311-2006
© Author(s) 2006. This work is licensed under
the Creative Commons Attribution-NonCommercial-ShareAlike 2.5 License.
the Creative Commons Attribution-NonCommercial-ShareAlike 2.5 License.
Temperature, pressure, and electrochemical constraints on protein speciation: Group additivity calculation of the standard molal thermodynamic properties of ionized unfolded proteins
J. M. Dick
Department of Earth and Planetary Science, University of California, Berkeley, CA 94720-4767, USA
D. E. LaRowe
Department of Earth and Planetary Science, University of California, Berkeley, CA 94720-4767, USA
H. C. Helgeson
Department of Earth and Planetary Science, University of California, Berkeley, CA 94720-4767, USA
Viewed
Total article views: 4,389 (including HTML, PDF, and XML)
Cumulative views and downloads
(calculated since 01 Feb 2013, article published on 11 Oct 2005)
| HTML | XML | Total | BibTeX | EndNote | |
|---|---|---|---|---|---|
| 2,099 | 2,021 | 269 | 4,389 | 203 | 196 |
- HTML: 2,099
- PDF: 2,021
- XML: 269
- Total: 4,389
- BibTeX: 203
- EndNote: 196
Total article views: 3,559 (including HTML, PDF, and XML)
Cumulative views and downloads
(calculated since 01 Feb 2013, article published on 21 Jul 2006)
| HTML | XML | Total | BibTeX | EndNote | |
|---|---|---|---|---|---|
| 1,825 | 1,491 | 243 | 3,559 | 176 | 187 |
- HTML: 1,825
- PDF: 1,491
- XML: 243
- Total: 3,559
- BibTeX: 176
- EndNote: 187
Total article views: 830 (including HTML, PDF, and XML)
Cumulative views and downloads
(calculated since 01 Feb 2013, article published on 11 Oct 2005)
| HTML | XML | Total | BibTeX | EndNote | |
|---|---|---|---|---|---|
| 274 | 530 | 26 | 830 | 27 | 9 |
- HTML: 274
- PDF: 530
- XML: 26
- Total: 830
- BibTeX: 27
- EndNote: 9
Cited
48 citations as recorded by crossref.
- Catabolic and anabolic energy for chemolithoautotrophs in deep-sea hydrothermal systems hosted in different rock types J. Amend et al.
- Ultrasonic monitoring of enzymatic hydrolysis of proteins. 1. Effects of ionisation M. Dizon & V. Buckin
- Necromass as a Limited Source of Energy for Microorganisms in Marine Sediments J. Bradley et al.
- Quantifying the energetics of metabolic reactions in diverse biogeochemical systems: electron flow and ATP synthesis D. LAROWE & H. HELGESON
- Predicting Thermodynamic Behaviors of Non-Protein Amino Acids as a Function of Temperature and pH N. Kitadai
- Nanocalorimetric Characterization of Microbial Activity in Deep Subsurface Oceanic Crustal Fluids A. Robador et al.
- Community- and genome-based evidence for a shaping influence of redox potential on bacterial protein evolution J. Dick et al.
- Prerequisites for explosive cryovolcanism on dwarf planet-class Kuiper belt objects M. Neveu et al.
- Changes in Carbon Oxidation State of Metagenomes Along Geochemical Redox Gradients J. Dick et al.
- The energetics of metabolism in hydrothermal systems: Calculation of the standard molal thermodynamic properties of magnesium-complexed adenosine nucleotides and NAD and NADP at elevated temperatures and pressures D. LaRowe & H. Helgeson
- Calculation of the standard molal thermodynamic properties of crystalline peptides D. LaRowe & J. Dick
- Thermodynamic Prediction of Glycine Polymerization as a Function of Temperature and pH Consistent with Experimentally Obtained Results N. Kitadai
- The Energetics of Fermentation in Natural Settings D. LaRowe & J. Amend
- CHNOSZ: Thermodynamic Calculations and Diagrams for Geochemistry J. Dick
- Average oxidation state of carbon in proteins J. Dick
- Thermodynamic Constraints on the Citric Acid Cycle and Related Reactions in Ocean World Interiors S. Işık et al.
- The Geochemical Potential for Metabolic Processes on the Sub-Neptune Exoplanet K2-18b C. Glein
- Polymerization of Building Blocks of Life on Europa and Other Icy Moons J. Kimura & N. Kitadai
- Quantifying the extent of amide and peptide bond synthesis across conditions relevant to geologic and planetary environments K. Robinson et al.
- The Release of Energy During Protein Synthesis at Ultramafic‐Hosted Submarine Hydrothermal Ecosystems J. Dick & E. Shock
- Ultrasonic monitoring of enzymatic hydrolysis of proteins. 2. relaxation effects M. Dizon & V. Buckin
- Geobiochemistry of metabolism: Standard state thermodynamic properties of the citric acid cycle P. Canovas & E. Shock
- The energetics of organic synthesis inside and outside the cell J. Amend et al.
- Calorimetric measurement of energy and nutrient stimulation of microorganisms from the continental deep subsurface J. Feyhl-Buska et al.
- Calculation of the relative metastabilities of proteins using the CHNOSZ software package J. Dick
- Effect of Joule heating on isoelectric focusing of proteins in a microchannel K. Yoo et al.
- Hydration–dehydration interactions between glycine and anhydrous salts: Implications for a chemical evolution of life N. Kitadai et al.
- Calculation of the relative metastabilities of proteins in subcellular compartments of Saccharomyces cerevisiae J. Dick
- Probing Contributions to the Volume and Isothermal Compressibility of Globular Proteins Using a Fluctuation Solution Theory Analysis of MD Simulations E. Ploetz et al.
- Water in the deep Earth: The dielectric constant and the solubilities of quartz and corundum to 60kb and 1200°C D. Sverjensky et al.
- The energetics of anabolism in natural settings D. LaRowe & J. Amend
- Data analysis and estimation of thermodynamic properties of aqueous monovalent metal-glycinate complexes M. Azadi et al.
- SUPCRTBL: A revised and extended thermodynamic dataset and software package of SUPCRT92 K. Zimmer et al.
- A chemical and thermodynamic model of oil generation in hydrocarbon source rocks H. Helgeson et al.
- Energetics of Amino Acid Synthesis in Alkaline Hydrothermal Environments N. Kitadai
- A Metastable Equilibrium Model for the Relative Abundances of Microbial Phyla in a Hot Spring J. Dick et al.
- Proteomic indicators of oxidation and hydration state in colorectal cancer J. Dick
- Chemical composition and the potential for proteomic transformation in cancer, hypoxia, and hyperosmotic stress J. Dick
- Dissolved amino acids in oceanic basaltic basement fluids H. Lin et al.
- The central role of ketones in reversible and irreversible hydrothermal organic functional group transformations Z. Yang et al.
- Activity and phylogenetic diversity of sulfate-reducing microorganisms in low-temperature subsurface fluids within the upper oceanic crust A. Robador et al.
- A Thermodynamic Model for Water Activity and Redox Potential in Evolution and Development J. Dick
- A thermodynamic analysis of the anaerobic oxidation of methane in marine sediments D. LAROWE et al.
- The potential for abiotic organic synthesis and biosynthesis at seafloor hydrothermal systems E. SHOCK & P. CANOVAS
- Redox Gradient Shapes the Chemical Composition of Peatland Microbial Communities V. Milesi
- Calculation of the Relative Chemical Stabilities of Proteins as a Function of Temperature and Redox Chemistry in a Hot Spring J. Dick et al.
- Thermodynamic modelling of fluids from surficial to mantle conditions D. Sverjensky
- Degradation of natural organic matter: A thermodynamic analysis D. LaRowe & P. Van Cappellen
48 citations as recorded by crossref.
- Catabolic and anabolic energy for chemolithoautotrophs in deep-sea hydrothermal systems hosted in different rock types J. Amend et al.
- Ultrasonic monitoring of enzymatic hydrolysis of proteins. 1. Effects of ionisation M. Dizon & V. Buckin
- Necromass as a Limited Source of Energy for Microorganisms in Marine Sediments J. Bradley et al.
- Quantifying the energetics of metabolic reactions in diverse biogeochemical systems: electron flow and ATP synthesis D. LAROWE & H. HELGESON
- Predicting Thermodynamic Behaviors of Non-Protein Amino Acids as a Function of Temperature and pH N. Kitadai
- Nanocalorimetric Characterization of Microbial Activity in Deep Subsurface Oceanic Crustal Fluids A. Robador et al.
- Community- and genome-based evidence for a shaping influence of redox potential on bacterial protein evolution J. Dick et al.
- Prerequisites for explosive cryovolcanism on dwarf planet-class Kuiper belt objects M. Neveu et al.
- Changes in Carbon Oxidation State of Metagenomes Along Geochemical Redox Gradients J. Dick et al.
- The energetics of metabolism in hydrothermal systems: Calculation of the standard molal thermodynamic properties of magnesium-complexed adenosine nucleotides and NAD and NADP at elevated temperatures and pressures D. LaRowe & H. Helgeson
- Calculation of the standard molal thermodynamic properties of crystalline peptides D. LaRowe & J. Dick
- Thermodynamic Prediction of Glycine Polymerization as a Function of Temperature and pH Consistent with Experimentally Obtained Results N. Kitadai
- The Energetics of Fermentation in Natural Settings D. LaRowe & J. Amend
- CHNOSZ: Thermodynamic Calculations and Diagrams for Geochemistry J. Dick
- Average oxidation state of carbon in proteins J. Dick
- Thermodynamic Constraints on the Citric Acid Cycle and Related Reactions in Ocean World Interiors S. Işık et al.
- The Geochemical Potential for Metabolic Processes on the Sub-Neptune Exoplanet K2-18b C. Glein
- Polymerization of Building Blocks of Life on Europa and Other Icy Moons J. Kimura & N. Kitadai
- Quantifying the extent of amide and peptide bond synthesis across conditions relevant to geologic and planetary environments K. Robinson et al.
- The Release of Energy During Protein Synthesis at Ultramafic‐Hosted Submarine Hydrothermal Ecosystems J. Dick & E. Shock
- Ultrasonic monitoring of enzymatic hydrolysis of proteins. 2. relaxation effects M. Dizon & V. Buckin
- Geobiochemistry of metabolism: Standard state thermodynamic properties of the citric acid cycle P. Canovas & E. Shock
- The energetics of organic synthesis inside and outside the cell J. Amend et al.
- Calorimetric measurement of energy and nutrient stimulation of microorganisms from the continental deep subsurface J. Feyhl-Buska et al.
- Calculation of the relative metastabilities of proteins using the CHNOSZ software package J. Dick
- Effect of Joule heating on isoelectric focusing of proteins in a microchannel K. Yoo et al.
- Hydration–dehydration interactions between glycine and anhydrous salts: Implications for a chemical evolution of life N. Kitadai et al.
- Calculation of the relative metastabilities of proteins in subcellular compartments of Saccharomyces cerevisiae J. Dick
- Probing Contributions to the Volume and Isothermal Compressibility of Globular Proteins Using a Fluctuation Solution Theory Analysis of MD Simulations E. Ploetz et al.
- Water in the deep Earth: The dielectric constant and the solubilities of quartz and corundum to 60kb and 1200°C D. Sverjensky et al.
- The energetics of anabolism in natural settings D. LaRowe & J. Amend
- Data analysis and estimation of thermodynamic properties of aqueous monovalent metal-glycinate complexes M. Azadi et al.
- SUPCRTBL: A revised and extended thermodynamic dataset and software package of SUPCRT92 K. Zimmer et al.
- A chemical and thermodynamic model of oil generation in hydrocarbon source rocks H. Helgeson et al.
- Energetics of Amino Acid Synthesis in Alkaline Hydrothermal Environments N. Kitadai
- A Metastable Equilibrium Model for the Relative Abundances of Microbial Phyla in a Hot Spring J. Dick et al.
- Proteomic indicators of oxidation and hydration state in colorectal cancer J. Dick
- Chemical composition and the potential for proteomic transformation in cancer, hypoxia, and hyperosmotic stress J. Dick
- Dissolved amino acids in oceanic basaltic basement fluids H. Lin et al.
- The central role of ketones in reversible and irreversible hydrothermal organic functional group transformations Z. Yang et al.
- Activity and phylogenetic diversity of sulfate-reducing microorganisms in low-temperature subsurface fluids within the upper oceanic crust A. Robador et al.
- A Thermodynamic Model for Water Activity and Redox Potential in Evolution and Development J. Dick
- A thermodynamic analysis of the anaerobic oxidation of methane in marine sediments D. LAROWE et al.
- The potential for abiotic organic synthesis and biosynthesis at seafloor hydrothermal systems E. SHOCK & P. CANOVAS
- Redox Gradient Shapes the Chemical Composition of Peatland Microbial Communities V. Milesi
- Calculation of the Relative Chemical Stabilities of Proteins as a Function of Temperature and Redox Chemistry in a Hot Spring J. Dick et al.
- Thermodynamic modelling of fluids from surficial to mantle conditions D. Sverjensky
- Degradation of natural organic matter: A thermodynamic analysis D. LaRowe & P. Van Cappellen
Saved (final revised paper)
Latest update: 26 Apr 2026