Articles | Volume 8, issue 7
https://doi.org/10.5194/bg-8-1755-2011
© Author(s) 2011. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
https://doi.org/10.5194/bg-8-1755-2011
© Author(s) 2011. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
Research article
| 
05 Jul 2011
Research article |
| 05 Jul 2011
Turning sunlight into stone: the oxalate-carbonate pathway in a tropical tree ecosystem
G. Cailleau
Institute of geology and palaeontology, University of Lausanne, Lausanne, Switzerland
O. Braissant
Laboratory of Biomechanics & Biocalorimetry, Biozentrum/Pharmazentrum, University of Basel, Basel, Switzerland
E. P. Verrecchia
Institute of geology and palaeontology, University of Lausanne, Lausanne, Switzerland
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60 citations as recorded by crossref.
- Oxalate content of vegetation and termite frass in western South Africa T. Nel et al. https://doi.org/10.1002/ecs2.70265
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- Microstructure and mechanical properties of bark cloth extracted from Milicia excelsa: A promising naturally occurring fabric for use in composite materials? E. Elong Elong et al. https://doi.org/10.1016/j.indcrop.2025.121792
- Identification of active oxalotrophic bacteria by Bromodeoxyuridine DNA labeling in a microcosm soil experiments D. Bravo et al. https://doi.org/10.1111/1574-6968.12244
- Termite constructions as patches of soil fertility in Cambodian paddy fields R. Muon et al. https://doi.org/10.1016/j.geodrs.2023.e00640
- The interplay between microbial communities and soil properties L. Philippot et al. https://doi.org/10.1038/s41579-023-00980-5
- Pseudomorphs of barite and biogenic ZnS after phyto-crystals of calcium oxalate (whewellite) in the peat layer of a poor fen B. Smieja-Król et al. https://doi.org/10.1007/s11356-014-2700-7
- Functional Diversity of the Litter-Associated Fungi from an Oxalate-Carbonate Pathway Ecosystem in Madagascar V. Hervé et al. https://doi.org/10.3390/microorganisms9050985
- Calcium oxalate in soils, its origins and fate – a review N. Uren https://doi.org/10.1071/SR17244
- Technical note: Further adjustments to the Rock-Eval® thermal analysis for soil organic and inorganic carbon quantification to avoid post-hoc corrections J. Hazera et al. https://doi.org/10.5194/bg-23-1881-2026
- Oxalate Carbonate Pathway—Conversion and Fixation of Soil Carbon—A Potential Scenario for Sustainability S. Syed et al. https://doi.org/10.3389/fpls.2020.591297
- Biomineralization of Metal Carbonates by Neurospora crassa Q. Li et al. https://doi.org/10.1021/es5042546
- Navigating complexity: key considerations for studying fungal-bacterial interactions G. Martin et al. https://doi.org/10.1128/msystems.01728-25
- Carbonate Accumulation in the Bark of Terminalia bellirica: A New Habitat for the Oxalate-Carbonate Pathway V. Hervé et al. https://doi.org/10.1080/01490451.2017.1309087
- Secondary products and molecular mechanism of calcium oxalate degradation by the strain Azospirillum sp. OX-1 D. Xia et al. https://doi.org/10.1038/s41598-024-74939-8
- Large amounts of calcium oxalate crystals accumulate in epidermis of edible cactus (Nopalea cochenillifera) T. Horibe et al. https://doi.org/10.17660/ActaHortic.2024.1404.158
- Affinity of carbon quantum dots anchored within metal organic framework matrix as enhancer of plant nourishment H. Ahmed et al. https://doi.org/10.1016/j.heliyon.2022.e12396
- Calcite accumulation in a South African heuweltjie: Role of the termite Microhodotermes viator and oribatid mites M. Francis & R. Poch https://doi.org/10.1016/j.jaridenv.2019.05.009
- Lightning teeth andPonari sweat: Folk theories and magical uses of prehistoric stone axes (and adzes) in Island Southeast Asia and the origin of thunderstone beliefs A. Brumm https://doi.org/10.1080/03122417.2018.1468059
- Metazoan calcium carbonate biomineralizations: macroevolutionary trends – challenges for the coming decade F. Marin et al. https://doi.org/10.2113/gssgfbull.185.4.217
- Efficient Quantification of Soluble and Insoluble Oxalates in Clay Mineral Mixtures T. Nel et al. https://doi.org/10.1080/00103624.2024.2336574
- Thermally based isotopic speciation of carbon in complex matrices: a tool for environmental investigation C. Natali & G. Bianchini https://doi.org/10.1007/s11356-015-4503-x
- Characterization of an oxalate-phosphate-amine metal–organic framework (OPA-MOF) exhibiting properties suited for innovative applications in agriculture M. Anstoetz et al. https://doi.org/10.1007/s10853-016-0171-6
- Isolation and characterization of oxalotrophic bacteria from tropical soils D. Bravo et al. https://doi.org/10.1007/s00203-014-1055-2
- Biocontrolled soil nutrient distribution under the influence of an oxalogenic-oxalotrophic ecosystem S. Pons et al. https://doi.org/10.1007/s11104-018-3573-1
- Two-dimensional modeling of CO2 mineral trapping through the oxalate‑carbonate pathway: Influence of the root system model H. Gatz-Miller et al. https://doi.org/10.1016/j.scitotenv.2023.166280
- Carbon Storage through Rapid Conversion of Forsterite into Solid Oxalate Phases R. Grayevsky et al. https://doi.org/10.1021/acs.energyfuels.2c03245
- Physiological and ecological significance of biomineralization in plants H. He et al. https://doi.org/10.1016/j.tplants.2013.11.002
- Reactive transport modelling the oxalate-carbonate pathway of the Iroko tree; Investigation of calcium and carbon sinks and sources H. Gatz-Miller et al. https://doi.org/10.1016/j.geoderma.2021.115665
- Adjustments to the Rock-Eval® thermal analysis for soil organic and inorganic carbon quantification J. Hazera et al. https://doi.org/10.5194/bg-20-5229-2023
- Moving carbon between spheres, the potential oxalate-carbonate pathway of Brosimum alicastrum Sw.; Moraceae M. Rowley et al. https://doi.org/10.1007/s11104-016-3135-3
- Diversity and ecology of oxalotrophic bacteria V. Hervé et al. https://doi.org/10.1007/s11274-015-1982-3
- Dynamics of soil organic matter based on new Rock-Eval indices D. Sebag et al. https://doi.org/10.1016/j.geoderma.2016.08.025
- Fungi, bacteria and soil pH: the oxalate–carbonate pathway as a model for metabolic interaction G. Martin et al. https://doi.org/10.1111/j.1462-2920.2012.02862.x
- Radiocarbon dating reveals the timing of formation and development of pedogenic calcium carbonate concretions in Central Sudan during the Holocene G. Dal Sasso et al. https://doi.org/10.1016/j.gca.2018.06.037
- Oxalate production by fungi: significance in geomycology, biodeterioration and bioremediation G. Gadd et al. https://doi.org/10.1016/j.fbr.2014.05.001
- Compression moulding of Milicia excelsa inner bark: a way to obtain fully biobased fibre-reinforced composites from a waste material E. Elong et al. https://doi.org/10.1007/s00107-026-02413-5
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- Impacts of fungus-growing termites on surficial geology parameters: A review J. Van Thuyne & E. Verrecchia https://doi.org/10.1016/j.earscirev.2021.103862
- What do we really know about early diagenesis of non-marine carbonates? E. De Boever et al. https://doi.org/10.1016/j.sedgeo.2017.09.011
- Can cacti alleviate global warming? Measurement of calcium oxalate crystal content and carbon dioxide fixation in cactus stem (Nopalea cochenillifera) T. Horibe & S. Tsuchimoto https://doi.org/10.17660/ActaHortic.2025.1434.31
- Oxalate and oxalotrophy: an environmental perspective D. Cowan et al. https://doi.org/10.1093/sumbio/qvad004
- Degradation of Metal-Organic Framework Materials as Controlled-Release Fertilizers in Crop Fields K. Wu et al. https://doi.org/10.3390/polym11060947
- Rhizosphere characteristics combined with physiology and transcriptomics reveal key metabolic pathway responses in Dendrobium officinale upon exposure to calcium-rich karst environments G. Du et al. https://doi.org/10.1016/j.envexpbot.2025.106115
- Oxalotrophic bacterial assemblages in the ectomycorrhizosphere of forest trees and their effects on oxalate degradation and carbon fixation potential Q. Sun et al. https://doi.org/10.1016/j.chemgeo.2019.03.023
- Biogeochemical Pathways of Carbon Biomineralization in Arboreal and Edaphic Systems M. Saha et al. https://doi.org/10.1002/ldr.70672
- Differences in oxalate–carbonate pathway of Brosimum alicastrum in karst homegarden and forest soils O. Álvarez‐Rivera et al. https://doi.org/10.1002/saj2.20228
- Boosting vegetation, biochemical constituents, grain yield and anti-cancer performance of cultivated oat (Avena sativa L) in calcareous soil using oat extracts coated inside nanocarriers N. Mahmoud et al. https://doi.org/10.1186/s12870-022-03926-w
- Calcium oxalate and calcium cycling in forest ecosystems R. Parsons et al. https://doi.org/10.1007/s00468-021-02226-4
- Soil inorganic carbon: A review of global research trends, analytical techniques, ecosystem functions and critical knowledge gaps F. Dina Ebouel et al. https://doi.org/10.1016/j.catena.2024.108112
- Roles of oxalate-degrading bacteria in fungus-growing termite nests Q. Sun et al. https://doi.org/10.3897/BDJ.12.e130041
- Termites, Mud Daubers and their Earths: A Multispecies Approach to Fertility and Power in West Africa J. Fairhead https://doi.org/10.4103/0972-4923.197613
- Bio-inspired functional wood-based materials – hybrids and replicates I. Burgert et al. https://doi.org/10.1179/1743280415Y.0000000009
- Novel oxalate-carbonate pathways identified in the tropical dry evergreen forest of Tamil Nadu, India C. Rieder et al. https://doi.org/10.5194/bg-22-6979-2025
- Mechanistic models for rhizolith formation and their implications for paleoenvironmental reconstructions K. Tetteh et al. https://doi.org/10.1017/qua.2025.10021
- Detection of active oxalate–carbonate pathway ecosystems in the Amazon Basin: Global implications of a natural potential C sink G. Cailleau et al. https://doi.org/10.1016/j.catena.2013.12.017
- Reviews and syntheses: Biological weathering and its consequences at different spatial levels – from nanoscale to global scale R. Finlay et al. https://doi.org/10.5194/bg-17-1507-2020
- Isolation of oxalotrophic bacteria able to disperse on fungal mycelium D. Bravo et al. https://doi.org/10.1111/1574-6968.12287
- Evidences for Microbial Precipitation of Calcite in Speleothems from Krem Syndai in Jaintia Hills, Meghalaya, India S. Baskar et al. https://doi.org/10.1080/01490451.2015.1127447
- Response Surface Optimisation of an Oxalate–Phosphate–Amine Metal–Organic Framework (OPA-MOF) of Iron and Urea M. Anstoetz et al. https://doi.org/10.1007/s10904-017-0547-3
60 citations as recorded by crossref.
- Oxalate content of vegetation and termite frass in western South Africa T. Nel et al. https://doi.org/10.1002/ecs2.70265
- Hybrid wood materials with improved fire retardance by bio-inspired mineralisation on the nano- and submicron level V. Merk et al. https://doi.org/10.1039/C4GC01862A
- Microstructure and mechanical properties of bark cloth extracted from Milicia excelsa: A promising naturally occurring fabric for use in composite materials? E. Elong Elong et al. https://doi.org/10.1016/j.indcrop.2025.121792
- Identification of active oxalotrophic bacteria by Bromodeoxyuridine DNA labeling in a microcosm soil experiments D. Bravo et al. https://doi.org/10.1111/1574-6968.12244
- Termite constructions as patches of soil fertility in Cambodian paddy fields R. Muon et al. https://doi.org/10.1016/j.geodrs.2023.e00640
- The interplay between microbial communities and soil properties L. Philippot et al. https://doi.org/10.1038/s41579-023-00980-5
- Pseudomorphs of barite and biogenic ZnS after phyto-crystals of calcium oxalate (whewellite) in the peat layer of a poor fen B. Smieja-Król et al. https://doi.org/10.1007/s11356-014-2700-7
- Functional Diversity of the Litter-Associated Fungi from an Oxalate-Carbonate Pathway Ecosystem in Madagascar V. Hervé et al. https://doi.org/10.3390/microorganisms9050985
- Calcium oxalate in soils, its origins and fate – a review N. Uren https://doi.org/10.1071/SR17244
- Technical note: Further adjustments to the Rock-Eval® thermal analysis for soil organic and inorganic carbon quantification to avoid post-hoc corrections J. Hazera et al. https://doi.org/10.5194/bg-23-1881-2026
- Oxalate Carbonate Pathway—Conversion and Fixation of Soil Carbon—A Potential Scenario for Sustainability S. Syed et al. https://doi.org/10.3389/fpls.2020.591297
- Biomineralization of Metal Carbonates by Neurospora crassa Q. Li et al. https://doi.org/10.1021/es5042546
- Navigating complexity: key considerations for studying fungal-bacterial interactions G. Martin et al. https://doi.org/10.1128/msystems.01728-25
- Carbonate Accumulation in the Bark of Terminalia bellirica: A New Habitat for the Oxalate-Carbonate Pathway V. Hervé et al. https://doi.org/10.1080/01490451.2017.1309087
- Secondary products and molecular mechanism of calcium oxalate degradation by the strain Azospirillum sp. OX-1 D. Xia et al. https://doi.org/10.1038/s41598-024-74939-8
- Large amounts of calcium oxalate crystals accumulate in epidermis of edible cactus (Nopalea cochenillifera) T. Horibe et al. https://doi.org/10.17660/ActaHortic.2024.1404.158
- Affinity of carbon quantum dots anchored within metal organic framework matrix as enhancer of plant nourishment H. Ahmed et al. https://doi.org/10.1016/j.heliyon.2022.e12396
- Calcite accumulation in a South African heuweltjie: Role of the termite Microhodotermes viator and oribatid mites M. Francis & R. Poch https://doi.org/10.1016/j.jaridenv.2019.05.009
- Lightning teeth andPonari sweat: Folk theories and magical uses of prehistoric stone axes (and adzes) in Island Southeast Asia and the origin of thunderstone beliefs A. Brumm https://doi.org/10.1080/03122417.2018.1468059
- Metazoan calcium carbonate biomineralizations: macroevolutionary trends – challenges for the coming decade F. Marin et al. https://doi.org/10.2113/gssgfbull.185.4.217
- Efficient Quantification of Soluble and Insoluble Oxalates in Clay Mineral Mixtures T. Nel et al. https://doi.org/10.1080/00103624.2024.2336574
- Thermally based isotopic speciation of carbon in complex matrices: a tool for environmental investigation C. Natali & G. Bianchini https://doi.org/10.1007/s11356-015-4503-x
- Characterization of an oxalate-phosphate-amine metal–organic framework (OPA-MOF) exhibiting properties suited for innovative applications in agriculture M. Anstoetz et al. https://doi.org/10.1007/s10853-016-0171-6
- Isolation and characterization of oxalotrophic bacteria from tropical soils D. Bravo et al. https://doi.org/10.1007/s00203-014-1055-2
- Biocontrolled soil nutrient distribution under the influence of an oxalogenic-oxalotrophic ecosystem S. Pons et al. https://doi.org/10.1007/s11104-018-3573-1
- Two-dimensional modeling of CO2 mineral trapping through the oxalate‑carbonate pathway: Influence of the root system model H. Gatz-Miller et al. https://doi.org/10.1016/j.scitotenv.2023.166280
- Carbon Storage through Rapid Conversion of Forsterite into Solid Oxalate Phases R. Grayevsky et al. https://doi.org/10.1021/acs.energyfuels.2c03245
- Physiological and ecological significance of biomineralization in plants H. He et al. https://doi.org/10.1016/j.tplants.2013.11.002
- Reactive transport modelling the oxalate-carbonate pathway of the Iroko tree; Investigation of calcium and carbon sinks and sources H. Gatz-Miller et al. https://doi.org/10.1016/j.geoderma.2021.115665
- Adjustments to the Rock-Eval® thermal analysis for soil organic and inorganic carbon quantification J. Hazera et al. https://doi.org/10.5194/bg-20-5229-2023
- Moving carbon between spheres, the potential oxalate-carbonate pathway of Brosimum alicastrum Sw.; Moraceae M. Rowley et al. https://doi.org/10.1007/s11104-016-3135-3
- Diversity and ecology of oxalotrophic bacteria V. Hervé et al. https://doi.org/10.1007/s11274-015-1982-3
- Dynamics of soil organic matter based on new Rock-Eval indices D. Sebag et al. https://doi.org/10.1016/j.geoderma.2016.08.025
- Fungi, bacteria and soil pH: the oxalate–carbonate pathway as a model for metabolic interaction G. Martin et al. https://doi.org/10.1111/j.1462-2920.2012.02862.x
- Radiocarbon dating reveals the timing of formation and development of pedogenic calcium carbonate concretions in Central Sudan during the Holocene G. Dal Sasso et al. https://doi.org/10.1016/j.gca.2018.06.037
- Oxalate production by fungi: significance in geomycology, biodeterioration and bioremediation G. Gadd et al. https://doi.org/10.1016/j.fbr.2014.05.001
- Compression moulding of Milicia excelsa inner bark: a way to obtain fully biobased fibre-reinforced composites from a waste material E. Elong et al. https://doi.org/10.1007/s00107-026-02413-5
- Can cacti alleviate global warming? Effect of red and blue light on the growth and calcium oxalate crystal content in Opuntia cochenillifera stem T. Horibe https://doi.org/10.17660/ActaHortic.2026.1452.63
- Impacts of fungus-growing termites on surficial geology parameters: A review J. Van Thuyne & E. Verrecchia https://doi.org/10.1016/j.earscirev.2021.103862
- What do we really know about early diagenesis of non-marine carbonates? E. De Boever et al. https://doi.org/10.1016/j.sedgeo.2017.09.011
- Can cacti alleviate global warming? Measurement of calcium oxalate crystal content and carbon dioxide fixation in cactus stem (Nopalea cochenillifera) T. Horibe & S. Tsuchimoto https://doi.org/10.17660/ActaHortic.2025.1434.31
- Oxalate and oxalotrophy: an environmental perspective D. Cowan et al. https://doi.org/10.1093/sumbio/qvad004
- Degradation of Metal-Organic Framework Materials as Controlled-Release Fertilizers in Crop Fields K. Wu et al. https://doi.org/10.3390/polym11060947
- Rhizosphere characteristics combined with physiology and transcriptomics reveal key metabolic pathway responses in Dendrobium officinale upon exposure to calcium-rich karst environments G. Du et al. https://doi.org/10.1016/j.envexpbot.2025.106115
- Oxalotrophic bacterial assemblages in the ectomycorrhizosphere of forest trees and their effects on oxalate degradation and carbon fixation potential Q. Sun et al. https://doi.org/10.1016/j.chemgeo.2019.03.023
- Biogeochemical Pathways of Carbon Biomineralization in Arboreal and Edaphic Systems M. Saha et al. https://doi.org/10.1002/ldr.70672
- Differences in oxalate–carbonate pathway of Brosimum alicastrum in karst homegarden and forest soils O. Álvarez‐Rivera et al. https://doi.org/10.1002/saj2.20228
- Boosting vegetation, biochemical constituents, grain yield and anti-cancer performance of cultivated oat (Avena sativa L) in calcareous soil using oat extracts coated inside nanocarriers N. Mahmoud et al. https://doi.org/10.1186/s12870-022-03926-w
- Calcium oxalate and calcium cycling in forest ecosystems R. Parsons et al. https://doi.org/10.1007/s00468-021-02226-4
- Soil inorganic carbon: A review of global research trends, analytical techniques, ecosystem functions and critical knowledge gaps F. Dina Ebouel et al. https://doi.org/10.1016/j.catena.2024.108112
- Roles of oxalate-degrading bacteria in fungus-growing termite nests Q. Sun et al. https://doi.org/10.3897/BDJ.12.e130041
- Termites, Mud Daubers and their Earths: A Multispecies Approach to Fertility and Power in West Africa J. Fairhead https://doi.org/10.4103/0972-4923.197613
- Bio-inspired functional wood-based materials – hybrids and replicates I. Burgert et al. https://doi.org/10.1179/1743280415Y.0000000009
- Novel oxalate-carbonate pathways identified in the tropical dry evergreen forest of Tamil Nadu, India C. Rieder et al. https://doi.org/10.5194/bg-22-6979-2025
- Mechanistic models for rhizolith formation and their implications for paleoenvironmental reconstructions K. Tetteh et al. https://doi.org/10.1017/qua.2025.10021
- Detection of active oxalate–carbonate pathway ecosystems in the Amazon Basin: Global implications of a natural potential C sink G. Cailleau et al. https://doi.org/10.1016/j.catena.2013.12.017
- Reviews and syntheses: Biological weathering and its consequences at different spatial levels – from nanoscale to global scale R. Finlay et al. https://doi.org/10.5194/bg-17-1507-2020
- Isolation of oxalotrophic bacteria able to disperse on fungal mycelium D. Bravo et al. https://doi.org/10.1111/1574-6968.12287
- Evidences for Microbial Precipitation of Calcite in Speleothems from Krem Syndai in Jaintia Hills, Meghalaya, India S. Baskar et al. https://doi.org/10.1080/01490451.2015.1127447
- Response Surface Optimisation of an Oxalate–Phosphate–Amine Metal–Organic Framework (OPA-MOF) of Iron and Urea M. Anstoetz et al. https://doi.org/10.1007/s10904-017-0547-3
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