Articles | Volume 12, issue 15
https://doi.org/10.5194/bg-12-4725-2015
© Author(s) 2015. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
https://doi.org/10.5194/bg-12-4725-2015
© Author(s) 2015. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
Research article
| 
06 Aug 2015
Research article |
| 06 Aug 2015
Intact polar lipids of Thaumarchaeota and anammox bacteria as indicators of N cycling in the eastern tropical North Pacific oxygen-deficient zone
M. Sollai
CORRESPONDING AUTHOR
NIOZ Royal Netherlands Institute for Sea Research, Department of Marine Organic Biogeochemistry, P.O. Box 59, 179AB Den Burg, the Netherlands
E. C. Hopmans
NIOZ Royal Netherlands Institute for Sea Research, Department of Marine Organic Biogeochemistry, P.O. Box 59, 179AB Den Burg, the Netherlands
S. Schouten
NIOZ Royal Netherlands Institute for Sea Research, Department of Marine Organic Biogeochemistry, P.O. Box 59, 179AB Den Burg, the Netherlands
University of Utrecht, Faculty of Geosciences, P.O. Box 80.021, 3508 TA Utrecht, the Netherlands
R. G. Keil
School of Oceanography, University of Washington, Box 355351, Seattle, Washington, 98195-5351, USA
J. S. Sinninghe Damsté
NIOZ Royal Netherlands Institute for Sea Research, Department of Marine Organic Biogeochemistry, P.O. Box 59, 179AB Den Burg, the Netherlands
University of Utrecht, Faculty of Geosciences, P.O. Box 80.021, 3508 TA Utrecht, the Netherlands
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Cited
18 citations as recorded by crossref.
- Additive Manufacturing for Contaminants: Ammonia Removal Using 3D Printed Polymer-Zeolite Composites A. Kennedy et al. 10.1021/acsestwater.0c00131
- Ladderane records over the last century in the East China sea: Proxies for anammox and eutrophication changes Z. Zhao et al. 10.1016/j.watres.2019.03.046
- Bacterial and archaeal lipids trace chemo(auto)trophy along the redoxcline in Vancouver Island fjords S. Kusch et al. 10.1111/gbi.12446
- Pathways regulating the removal of nitrogen in planted and unplanted subsurface flow constructed wetlands N. Paranychianakis et al. 10.1016/j.watres.2016.06.048
- Extent of the annual Gulf of Mexico hypoxic zone influences microbial community structure L. Campbell et al. 10.1371/journal.pone.0209055
- Intact polar lipids in the water column of the eastern tropical North Pacific: abundance and structural variety of non-phosphorus lipids F. Schubotz et al. 10.5194/bg-15-6481-2018
- Size-Fractionated Contribution of Microbial Biomass to Suspended Organic Matter in the Eastern Tropical South Pacific Oxygen Minimum Zone S. Cantarero et al. 10.3389/fmars.2020.540643
- Lipids as paleomarkers to constrain the marine nitrogen cycle D. Rush & J. Sinninghe Damsté 10.1111/1462-2920.13682
- Anaerobic digestion of pig manure supernatant at high ammonia concentrations characterized by high abundances of Methanosaeta and non-euryarchaeotal archaea A. Nordgård et al. 10.1038/s41598-017-14527-1
- Vertical segregation and phylogenetic characterization of archaea and archaeal ammonia monooxygenase gene in the water column of the western Arctic Ocean P. Vipindas et al. 10.1007/s00792-023-01310-6
- Constraining Water Depth Influence on Organic Paleotemperature Proxies Using Sedimentary Archives D. Varma et al. 10.1029/2022PA004533
- Stratification of archaeal membrane lipids in the ocean and implications for adaptation and chemotaxonomy of planktonic archaea C. Zhu et al. 10.1111/1462-2920.13289
- Loss of nitrogen via anaerobic ammonium oxidation (anammox) in the California Current system during the late Quaternary Z. van Kemenade et al. 10.5194/bg-21-1517-2024
- Limits of our knowledge, part 2: Selected frontiers in marine organic biogeochemistry S. Wakeham & C. Lee 10.1016/j.marchem.2019.02.005
- Prokaryotic community assembly patterns and nitrogen metabolic potential in oxygen minimum zone of Yangtze Estuary water column Y. Sun et al. 10.1016/j.envres.2024.119011
- Membrane Lipid Composition of the Moderately Thermophilic Ammonia-Oxidizing Archaeon “ Candidatus Nitrosotenuis uzonensis” at Different Growth Temperatures N. Bale et al. 10.1128/AEM.01332-19
- Organic biogeochemistry in the oxygen-deficient ocean: A review S. Wakeham 10.1016/j.orggeochem.2020.104096
- Niche Partitioning of the N Cycling Microbial Community of an Offshore Oxygen Deficient Zone C. Fuchsman et al. 10.3389/fmicb.2017.02384
17 citations as recorded by crossref.
- Additive Manufacturing for Contaminants: Ammonia Removal Using 3D Printed Polymer-Zeolite Composites A. Kennedy et al. 10.1021/acsestwater.0c00131
- Ladderane records over the last century in the East China sea: Proxies for anammox and eutrophication changes Z. Zhao et al. 10.1016/j.watres.2019.03.046
- Bacterial and archaeal lipids trace chemo(auto)trophy along the redoxcline in Vancouver Island fjords S. Kusch et al. 10.1111/gbi.12446
- Pathways regulating the removal of nitrogen in planted and unplanted subsurface flow constructed wetlands N. Paranychianakis et al. 10.1016/j.watres.2016.06.048
- Extent of the annual Gulf of Mexico hypoxic zone influences microbial community structure L. Campbell et al. 10.1371/journal.pone.0209055
- Intact polar lipids in the water column of the eastern tropical North Pacific: abundance and structural variety of non-phosphorus lipids F. Schubotz et al. 10.5194/bg-15-6481-2018
- Size-Fractionated Contribution of Microbial Biomass to Suspended Organic Matter in the Eastern Tropical South Pacific Oxygen Minimum Zone S. Cantarero et al. 10.3389/fmars.2020.540643
- Lipids as paleomarkers to constrain the marine nitrogen cycle D. Rush & J. Sinninghe Damsté 10.1111/1462-2920.13682
- Anaerobic digestion of pig manure supernatant at high ammonia concentrations characterized by high abundances of Methanosaeta and non-euryarchaeotal archaea A. Nordgård et al. 10.1038/s41598-017-14527-1
- Vertical segregation and phylogenetic characterization of archaea and archaeal ammonia monooxygenase gene in the water column of the western Arctic Ocean P. Vipindas et al. 10.1007/s00792-023-01310-6
- Constraining Water Depth Influence on Organic Paleotemperature Proxies Using Sedimentary Archives D. Varma et al. 10.1029/2022PA004533
- Stratification of archaeal membrane lipids in the ocean and implications for adaptation and chemotaxonomy of planktonic archaea C. Zhu et al. 10.1111/1462-2920.13289
- Loss of nitrogen via anaerobic ammonium oxidation (anammox) in the California Current system during the late Quaternary Z. van Kemenade et al. 10.5194/bg-21-1517-2024
- Limits of our knowledge, part 2: Selected frontiers in marine organic biogeochemistry S. Wakeham & C. Lee 10.1016/j.marchem.2019.02.005
- Prokaryotic community assembly patterns and nitrogen metabolic potential in oxygen minimum zone of Yangtze Estuary water column Y. Sun et al. 10.1016/j.envres.2024.119011
- Membrane Lipid Composition of the Moderately Thermophilic Ammonia-Oxidizing Archaeon “ Candidatus Nitrosotenuis uzonensis” at Different Growth Temperatures N. Bale et al. 10.1128/AEM.01332-19
- Organic biogeochemistry in the oxygen-deficient ocean: A review S. Wakeham 10.1016/j.orggeochem.2020.104096
1 citations as recorded by crossref.
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Latest update: 21 Nov 2024
Short summary
The distribution of Thaumarchaeota and anammox bacteria in the water column of the eastern tropical North Pacific (ETNP) oxygen-deficient zone (ODZ) was investigated by collecting suspended particulate matter (SPM) and analyzing it for the content of specific intact polar lipids (IPLs) produced by the two microbial groups. We found a clear niche segregation in the distribution of the two groups in the coastal waters of the ETNP but a partial overlap of their niches in the open-water setting.
The distribution of Thaumarchaeota and anammox bacteria in the water column of the eastern...
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