Articles | Volume 18, issue 3
https://doi.org/10.5194/bg-18-1185-2021
© Author(s) 2021. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/bg-18-1185-2021
© Author(s) 2021. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Denitrification in soil as a function of oxygen availability at the microscale
Helmholtz Centre for Environmental Research – UFZ, Department of Soil
System Sciences, Theodor-Lieser Str. 4, 06120 Halle, Germany
Bernd Apelt
Helmholtz Centre for Environmental Research – UFZ, Department of Soil
System Sciences, Theodor-Lieser Str. 4, 06120 Halle, Germany
Hans-Jörg Vogel
Helmholtz Centre for Environmental Research – UFZ, Department of Soil
System Sciences, Theodor-Lieser Str. 4, 06120 Halle, Germany
Reinhard Well
Thünen Institute of Climate-Smart Agriculture, Bundesallee 65,
38116 Braunschweig, Germany
Gi-Mick Wu
Helmholtz Centre for Environmental Research – UFZ, PACE,
Permoserstraße 15, 04318 Leipzig, Germany
Steffen Schlüter
Helmholtz Centre for Environmental Research – UFZ, Department of Soil
System Sciences, Theodor-Lieser Str. 4, 06120 Halle, Germany
Viewed
Total article views: 4,192 (including HTML, PDF, and XML)
Cumulative views and downloads
(calculated since 17 Jul 2020)
HTML | XML | Total | Supplement | BibTeX | EndNote | |
---|---|---|---|---|---|---|
2,681 | 1,433 | 78 | 4,192 | 433 | 66 | 100 |
- HTML: 2,681
- PDF: 1,433
- XML: 78
- Total: 4,192
- Supplement: 433
- BibTeX: 66
- EndNote: 100
Total article views: 3,247 (including HTML, PDF, and XML)
Cumulative views and downloads
(calculated since 16 Feb 2021)
HTML | XML | Total | Supplement | BibTeX | EndNote | |
---|---|---|---|---|---|---|
2,282 | 896 | 69 | 3,247 | 200 | 60 | 87 |
- HTML: 2,282
- PDF: 896
- XML: 69
- Total: 3,247
- Supplement: 200
- BibTeX: 60
- EndNote: 87
Total article views: 945 (including HTML, PDF, and XML)
Cumulative views and downloads
(calculated since 17 Jul 2020)
HTML | XML | Total | Supplement | BibTeX | EndNote | |
---|---|---|---|---|---|---|
399 | 537 | 9 | 945 | 233 | 6 | 13 |
- HTML: 399
- PDF: 537
- XML: 9
- Total: 945
- Supplement: 233
- BibTeX: 6
- EndNote: 13
Viewed (geographical distribution)
Total article views: 4,192 (including HTML, PDF, and XML)
Thereof 4,039 with geography defined
and 153 with unknown origin.
Total article views: 3,247 (including HTML, PDF, and XML)
Thereof 3,100 with geography defined
and 147 with unknown origin.
Total article views: 945 (including HTML, PDF, and XML)
Thereof 939 with geography defined
and 6 with unknown origin.
Country | # | Views | % |
---|
Country | # | Views | % |
---|
Country | # | Views | % |
---|
Total: | 0 |
HTML: | 0 |
PDF: | 0 |
XML: | 0 |
- 1
1
Total: | 0 |
HTML: | 0 |
PDF: | 0 |
XML: | 0 |
- 1
1
Total: | 0 |
HTML: | 0 |
PDF: | 0 |
XML: | 0 |
- 1
1
Cited
55 citations as recorded by crossref.
- Determining N2O and N2 fluxes in relation to winter wheat and sugar beet growth and development using the improved 15N gas flux method on the field scale J. Eckei et al. 10.1007/s00374-024-01806-z
- Pore distances of particulate organic matter predict N2O emissions from intact soil at moist conditions P. Ortega-Ramírez et al. 10.1016/j.geoderma.2022.116224
- Strategies for mitigating N2O and N2 emissions from an intensive sugarcane cropping system J. Friedl et al. 10.1007/s10705-023-10262-4
- Changes in soil pore structure generated by the root systems of maize, sorghum and switchgrass affect in situ N2O emissions and bacterial denitrification M. Lucas et al. 10.1007/s00374-023-01761-1
- Soil dependence of biochar composts in mitigating greenhouse gas emissions: An overlooked biophysical mechanism J. Hu et al. 10.1016/j.apsoil.2024.105374
- Measuring Nitrate Leaching in the Vadose Zone of Loess Soils—Comparison of Batch Extraction and Centrifugation D. Fraters et al. 10.3390/w15152709
- A new modeling approach for denitrification taking internal chemical gradients into account J. Schulze et al. 10.1007/s00374-024-01881-2
- Computed tomography scanning revealed macropore-controlled N2O emissions under long-term tillage and cover cropping practices J. Dhaliwal et al. 10.1016/j.scitotenv.2024.171782
- Consider the Anoxic Microsite: Acknowledging and Appreciating Spatiotemporal Redox Heterogeneity in Soils and Sediments E. Lacroix et al. 10.1021/acsearthspacechem.3c00032
- Isotopomeric Peak Assignment for N2O in Cross-Labeling Experiments by Fiber-Enhanced Raman Multigas Spectroscopy A. Blohm et al. 10.1021/acs.analchem.3c04236
- Organic matter composition and stability in estuarine wetlands depending on soil salinity L. Wu et al. 10.1016/j.scitotenv.2024.173861
- Understanding the Impact of Liquid Organic Fertilisation and Associated Application Techniques on N2, N2O and CO2 Fluxes from Agricultural Soils B. Grosz et al. 10.3390/agriculture12050692
- Lysimeter-based full fertilizer 15N balances corroborate direct dinitrogen emission measurements using the 15N gas flow method I. Yankelzon et al. 10.1007/s00374-024-01801-4
- Impact of Agricultural Activities on Climate Change: A Review of Greenhouse Gas Emission Patterns in Field Crop Systems Y. Xing & X. Wang 10.3390/plants13162285
- Root-rhizosphere-soil interactions in biopores A. Wendel et al. 10.1007/s11104-022-05406-4
- Microscale heterogeneity controls macroscopic soil heterotrophic respiration by regulating resource availability and environmental stress Z. Yan et al. 10.1007/s10533-023-01044-9
- Modeling Denitrification: Can We Report What We Don't Know? B. Grosz et al. 10.1029/2023AV000990
- KGML-ag: a modeling framework of knowledge-guided machine learning to simulate agroecosystems: a case study of estimating N<sub>2</sub>O emission using data from mesocosm experiments L. Liu et al. 10.5194/gmd-15-2839-2022
- Opportunities and limits in imaging microorganisms and their activities in soil microhabitats C. Védère et al. 10.1016/j.soilbio.2022.108807
- Distribution of Mn Oxidation States in Grassland Soils and Their Relationships with Soil Pores A. Kravchenko et al. 10.1021/acs.est.2c05403
- Very fine roots differ among switchgrass (Panicum virgatum L.) cultivars and differentially affect soil pores and carbon processes J. Lee et al. 10.1016/j.soilbio.2024.109610
- How to adequately represent biological processes in modeling multifunctionality of arable soils H. Vogel et al. 10.1007/s00374-024-01802-3
- Cover crop residue decomposition triggered soil oxygen depletion and promoted nitrous oxide emissions F. Lussich et al. 10.1038/s41598-024-58942-7
- Soil redox maps: assessment of small field-scale redox zonation by Mn and Fe oxide-coated IRIS films K. Dorau et al. 10.1007/s11368-023-03705-6
- The anaerobic soil volume as a controlling factor of denitrification: a review S. Schlüter et al. 10.1007/s00374-024-01819-8
- Microplastic polymer properties as deterministic factors driving terrestrial plastisphere microbiome assembly and succession in the field S. Rohrbach et al. 10.1111/1462-2920.16234
- Micro on a macroscale: relating microbial-scale soil processes to global ecosystem function D. Smercina et al. 10.1093/femsec/fiab091
- Understanding the joint impacts of soil architecture and microbial dynamics on soil functions: Insights derived from microscale models V. Pot et al. 10.1111/ejss.13256
- Amplitude and frequency of wetting and drying cycles drive N2 and N2O emissions from a subtropical pasture J. Friedl et al. 10.1007/s00374-022-01646-9
- Nitrosospira cluster 3 lineage of AOB and nirK of Rhizobiales respectively dominated N2O emissions from nitrification and denitrification in organic and chemical N fertilizer treated soils M. Chen et al. 10.1016/j.ecolind.2021.107722
- Soil aeration and redox potential as function of pore connectivity unravelled by X‐ray microtomography imaging K. Dorau et al. 10.1111/ejss.13165
- The distribution of particulate organic matter in the heterogeneous soil matrix - Balancing between aerobic respiration and denitrification M. Lucas et al. 10.1016/j.scitotenv.2024.175383
- Nitrous oxide production and isotopomer composition by fungi isolated from salt marsh sediments B. Lazo-Murphy et al. 10.3389/fmars.2022.1098508
- Moderate effects of distance to air-filled macropores on denitrification potentials in soils H. van Dijk et al. 10.1007/s00374-024-01864-3
- An open Soil Structure Library based on X-ray CT data U. Weller et al. 10.5194/soil-8-507-2022
- Impact of liming and maize residues on N2O and N2 fluxes in agricultural soils: an incubation study L. Pfülb et al. 10.1007/s00374-024-01825-w
- Hybrid pathways of denitrification drive N2O but not N2 emissions from an acid-sulphate sugarcane soil R. Kirkby et al. 10.1007/s00374-023-01783-9
- Soil compaction raises nitrous oxide emissions in managed agroecosystems. A review M. Pulido-Moncada et al. 10.1007/s13593-022-00773-9
- The reducing effect of aglime onN2OandCO2emissions balance from an acidic soil: A study on intact soil cores C. Rousset et al. 10.1111/ejss.13367
- Soil pore architecture and rhizosphere legacy define N2O production in root detritusphere K. Kim et al. 10.1016/j.soilbio.2022.108565
- An Innovative Prototype to Measure Carbon Dioxide, Ethylene, and Nitric and Nitrous Oxides in the Soil Air R. Kormann et al. 10.1080/00103624.2024.2378985
- A holistic perspective on soil architecture is needed as a key to soil functions H. Vogel et al. 10.1111/ejss.13152
- Short-term effect of liquid organic fertilisation and application methods on N2, N2O and CO2 fluxes from a silt loam arable soil B. Grosz et al. 10.1007/s00374-024-01814-z
- Evaluation of denitrification and decomposition from three biogeochemical models using laboratory measurements of N<sub>2</sub>, N<sub>2</sub>O and CO<sub>2</sub> B. Grosz et al. 10.5194/bg-18-5681-2021
- Resilience of ecosystem service delivery in grasslands in response to single and compound extreme weather events R. Dodd et al. 10.1016/j.scitotenv.2022.160660
- Increased N2O emissions by the soil nematode community cannot be fully explained by enhanced mineral N availability J. Hu et al. 10.1016/j.soilbio.2024.109314
- Microscale carbon distribution around pores and particulate organic matter varies with soil moisture regime S. Schlüter et al. 10.1038/s41467-022-29605-w
- Assessment of exurban expansion on water quality in Rock Creek of the Yellowstone River in southcentral Montana, USA D. Arthun & G. Zaimes 10.1080/02705060.2024.2416429
- Wetting and drainage cycles in two New Zealand soil types: Effects on relative gas diffusivity and N2O emissions C. Rousset et al. 10.1016/j.geodrs.2022.e00504
- Nitrate removal rates, isotopic fractionation, and denitrifying bacteria in a woodchip-based permeable reactive barrier system: a long-term column experiment A. Buyanjargal et al. 10.1007/s11356-022-24826-4
- Modeling of dual-permeability gas and solute reactive transport in macroporous agricultural soils with a focus on GHG cycling and emissions M. Jia et al. 10.1016/j.jhydrol.2023.129408
- Soil pore network effects on the fate of nitrous oxide as influenced by soil compaction, depth and water potential M. Pulido-Moncada et al. 10.1016/j.soilbio.2024.109536
- Dynamics of N2O in vicinity of plant residues: a microsensor approach K. Kim et al. 10.1007/s11104-021-04871-7
- Carbon Availability and Nitrogen Mineralization Control Denitrification Rates and Product Stoichiometry during Initial Maize Litter Decomposition P. Rummel et al. 10.3390/app11115309
- Nitrate uptake and carbon exudation – do plant roots stimulate or inhibit denitrification? P. Rummel et al. 10.1007/s11104-020-04750-7
52 citations as recorded by crossref.
- Determining N2O and N2 fluxes in relation to winter wheat and sugar beet growth and development using the improved 15N gas flux method on the field scale J. Eckei et al. 10.1007/s00374-024-01806-z
- Pore distances of particulate organic matter predict N2O emissions from intact soil at moist conditions P. Ortega-Ramírez et al. 10.1016/j.geoderma.2022.116224
- Strategies for mitigating N2O and N2 emissions from an intensive sugarcane cropping system J. Friedl et al. 10.1007/s10705-023-10262-4
- Changes in soil pore structure generated by the root systems of maize, sorghum and switchgrass affect in situ N2O emissions and bacterial denitrification M. Lucas et al. 10.1007/s00374-023-01761-1
- Soil dependence of biochar composts in mitigating greenhouse gas emissions: An overlooked biophysical mechanism J. Hu et al. 10.1016/j.apsoil.2024.105374
- Measuring Nitrate Leaching in the Vadose Zone of Loess Soils—Comparison of Batch Extraction and Centrifugation D. Fraters et al. 10.3390/w15152709
- A new modeling approach for denitrification taking internal chemical gradients into account J. Schulze et al. 10.1007/s00374-024-01881-2
- Computed tomography scanning revealed macropore-controlled N2O emissions under long-term tillage and cover cropping practices J. Dhaliwal et al. 10.1016/j.scitotenv.2024.171782
- Consider the Anoxic Microsite: Acknowledging and Appreciating Spatiotemporal Redox Heterogeneity in Soils and Sediments E. Lacroix et al. 10.1021/acsearthspacechem.3c00032
- Isotopomeric Peak Assignment for N2O in Cross-Labeling Experiments by Fiber-Enhanced Raman Multigas Spectroscopy A. Blohm et al. 10.1021/acs.analchem.3c04236
- Organic matter composition and stability in estuarine wetlands depending on soil salinity L. Wu et al. 10.1016/j.scitotenv.2024.173861
- Understanding the Impact of Liquid Organic Fertilisation and Associated Application Techniques on N2, N2O and CO2 Fluxes from Agricultural Soils B. Grosz et al. 10.3390/agriculture12050692
- Lysimeter-based full fertilizer 15N balances corroborate direct dinitrogen emission measurements using the 15N gas flow method I. Yankelzon et al. 10.1007/s00374-024-01801-4
- Impact of Agricultural Activities on Climate Change: A Review of Greenhouse Gas Emission Patterns in Field Crop Systems Y. Xing & X. Wang 10.3390/plants13162285
- Root-rhizosphere-soil interactions in biopores A. Wendel et al. 10.1007/s11104-022-05406-4
- Microscale heterogeneity controls macroscopic soil heterotrophic respiration by regulating resource availability and environmental stress Z. Yan et al. 10.1007/s10533-023-01044-9
- Modeling Denitrification: Can We Report What We Don't Know? B. Grosz et al. 10.1029/2023AV000990
- KGML-ag: a modeling framework of knowledge-guided machine learning to simulate agroecosystems: a case study of estimating N<sub>2</sub>O emission using data from mesocosm experiments L. Liu et al. 10.5194/gmd-15-2839-2022
- Opportunities and limits in imaging microorganisms and their activities in soil microhabitats C. Védère et al. 10.1016/j.soilbio.2022.108807
- Distribution of Mn Oxidation States in Grassland Soils and Their Relationships with Soil Pores A. Kravchenko et al. 10.1021/acs.est.2c05403
- Very fine roots differ among switchgrass (Panicum virgatum L.) cultivars and differentially affect soil pores and carbon processes J. Lee et al. 10.1016/j.soilbio.2024.109610
- How to adequately represent biological processes in modeling multifunctionality of arable soils H. Vogel et al. 10.1007/s00374-024-01802-3
- Cover crop residue decomposition triggered soil oxygen depletion and promoted nitrous oxide emissions F. Lussich et al. 10.1038/s41598-024-58942-7
- Soil redox maps: assessment of small field-scale redox zonation by Mn and Fe oxide-coated IRIS films K. Dorau et al. 10.1007/s11368-023-03705-6
- The anaerobic soil volume as a controlling factor of denitrification: a review S. Schlüter et al. 10.1007/s00374-024-01819-8
- Microplastic polymer properties as deterministic factors driving terrestrial plastisphere microbiome assembly and succession in the field S. Rohrbach et al. 10.1111/1462-2920.16234
- Micro on a macroscale: relating microbial-scale soil processes to global ecosystem function D. Smercina et al. 10.1093/femsec/fiab091
- Understanding the joint impacts of soil architecture and microbial dynamics on soil functions: Insights derived from microscale models V. Pot et al. 10.1111/ejss.13256
- Amplitude and frequency of wetting and drying cycles drive N2 and N2O emissions from a subtropical pasture J. Friedl et al. 10.1007/s00374-022-01646-9
- Nitrosospira cluster 3 lineage of AOB and nirK of Rhizobiales respectively dominated N2O emissions from nitrification and denitrification in organic and chemical N fertilizer treated soils M. Chen et al. 10.1016/j.ecolind.2021.107722
- Soil aeration and redox potential as function of pore connectivity unravelled by X‐ray microtomography imaging K. Dorau et al. 10.1111/ejss.13165
- The distribution of particulate organic matter in the heterogeneous soil matrix - Balancing between aerobic respiration and denitrification M. Lucas et al. 10.1016/j.scitotenv.2024.175383
- Nitrous oxide production and isotopomer composition by fungi isolated from salt marsh sediments B. Lazo-Murphy et al. 10.3389/fmars.2022.1098508
- Moderate effects of distance to air-filled macropores on denitrification potentials in soils H. van Dijk et al. 10.1007/s00374-024-01864-3
- An open Soil Structure Library based on X-ray CT data U. Weller et al. 10.5194/soil-8-507-2022
- Impact of liming and maize residues on N2O and N2 fluxes in agricultural soils: an incubation study L. Pfülb et al. 10.1007/s00374-024-01825-w
- Hybrid pathways of denitrification drive N2O but not N2 emissions from an acid-sulphate sugarcane soil R. Kirkby et al. 10.1007/s00374-023-01783-9
- Soil compaction raises nitrous oxide emissions in managed agroecosystems. A review M. Pulido-Moncada et al. 10.1007/s13593-022-00773-9
- The reducing effect of aglime onN2OandCO2emissions balance from an acidic soil: A study on intact soil cores C. Rousset et al. 10.1111/ejss.13367
- Soil pore architecture and rhizosphere legacy define N2O production in root detritusphere K. Kim et al. 10.1016/j.soilbio.2022.108565
- An Innovative Prototype to Measure Carbon Dioxide, Ethylene, and Nitric and Nitrous Oxides in the Soil Air R. Kormann et al. 10.1080/00103624.2024.2378985
- A holistic perspective on soil architecture is needed as a key to soil functions H. Vogel et al. 10.1111/ejss.13152
- Short-term effect of liquid organic fertilisation and application methods on N2, N2O and CO2 fluxes from a silt loam arable soil B. Grosz et al. 10.1007/s00374-024-01814-z
- Evaluation of denitrification and decomposition from three biogeochemical models using laboratory measurements of N<sub>2</sub>, N<sub>2</sub>O and CO<sub>2</sub> B. Grosz et al. 10.5194/bg-18-5681-2021
- Resilience of ecosystem service delivery in grasslands in response to single and compound extreme weather events R. Dodd et al. 10.1016/j.scitotenv.2022.160660
- Increased N2O emissions by the soil nematode community cannot be fully explained by enhanced mineral N availability J. Hu et al. 10.1016/j.soilbio.2024.109314
- Microscale carbon distribution around pores and particulate organic matter varies with soil moisture regime S. Schlüter et al. 10.1038/s41467-022-29605-w
- Assessment of exurban expansion on water quality in Rock Creek of the Yellowstone River in southcentral Montana, USA D. Arthun & G. Zaimes 10.1080/02705060.2024.2416429
- Wetting and drainage cycles in two New Zealand soil types: Effects on relative gas diffusivity and N2O emissions C. Rousset et al. 10.1016/j.geodrs.2022.e00504
- Nitrate removal rates, isotopic fractionation, and denitrifying bacteria in a woodchip-based permeable reactive barrier system: a long-term column experiment A. Buyanjargal et al. 10.1007/s11356-022-24826-4
- Modeling of dual-permeability gas and solute reactive transport in macroporous agricultural soils with a focus on GHG cycling and emissions M. Jia et al. 10.1016/j.jhydrol.2023.129408
- Soil pore network effects on the fate of nitrous oxide as influenced by soil compaction, depth and water potential M. Pulido-Moncada et al. 10.1016/j.soilbio.2024.109536
3 citations as recorded by crossref.
- Dynamics of N2O in vicinity of plant residues: a microsensor approach K. Kim et al. 10.1007/s11104-021-04871-7
- Carbon Availability and Nitrogen Mineralization Control Denitrification Rates and Product Stoichiometry during Initial Maize Litter Decomposition P. Rummel et al. 10.3390/app11115309
- Nitrate uptake and carbon exudation – do plant roots stimulate or inhibit denitrification? P. Rummel et al. 10.1007/s11104-020-04750-7
Latest update: 13 Dec 2024
Short summary
Total denitrification, i.e. N2O and (N2O + N2) fluxes, of repacked soil cores were analysed for different combinations of soils and water contents. Prediction accuracy of (N2O + N2) fluxes was highest with combined proxies for oxygen demand (CO2 flux) and oxygen supply (anaerobic soil volume fraction). Knowledge of denitrification completeness (product ratio) improved N2O predictions. Substitutions with cheaper proxies (soil organic matter, empirical diffusivity) reduced prediction accuracy.
Total denitrification, i.e. N2O and (N2O + N2) fluxes, of repacked soil cores were analysed for...
Altmetrics
Final-revised paper
Preprint