Articles | Volume 12, issue 15
https://doi.org/10.5194/bg-12-4751-2015
© Author(s) 2015. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
https://doi.org/10.5194/bg-12-4751-2015
© Author(s) 2015. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
Research article
| 
07 Aug 2015
Research article |
| 07 Aug 2015
Nitrogen fixation and the diazotroph community in the temperate coastal region of the northwestern North Pacific
T. Shiozaki
CORRESPONDING AUTHOR
Atmosphere and Ocean Research Institute, The University of Tokyo, Chiba, 277-8564, Japan
Department of Aquatic Bioscience, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, 113-8657, Japan
T. Nagata
Atmosphere and Ocean Research Institute, The University of Tokyo, Chiba, 277-8564, Japan
M. Ijichi
Atmosphere and Ocean Research Institute, The University of Tokyo, Chiba, 277-8564, Japan
K. Furuya
Department of Aquatic Bioscience, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, 113-8657, Japan
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Cited
43 citations as recorded by crossref.
- Dissolved organic matter uptake by Trichodesmium in the Southwest Pacific M. Benavides et al. 10.1038/srep41315
- N<sub>2</sub> fixation as a dominant new N source in the western tropical South Pacific Ocean (OUTPACE cruise) M. Caffin et al. 10.5194/bg-15-2565-2018
- Decadal Variations in Hydroxy Fatty Acids Over Chichijima Island in the North Pacific: Long‐Term Seasonal Variability in Plant and Microbial Markers P. Bikkina et al. 10.1029/2020JD033347
- Nutrient regulation of biological nitrogen fixation across the tropical western North Pacific Z. Wen et al. 10.1126/sciadv.abl7564
- Dynamic Biological Functioning Important for Simulating and Stabilizing Ocean Biogeochemistry P. Buchanan et al. 10.1002/2017GB005753
- Biogeographic drivers of diazotrophs in the western Pacific Ocean M. Chen et al. 10.1002/lno.11123
- Nitrogen fixation in the eastern Atlantic reaches similar levels in the Southern and Northern Hemisphere D. Fonseca-Batista et al. 10.1002/2016JC012335
- Kuroshio Shape Composition and Distribution of Filamentous Diazotrophs in the East China Sea and Southern Yellow Sea Z. Jiang et al. 10.1029/2019JC015413
- The complex effects of ocean acidification on the prominent N 2 -fixing cyanobacterium Trichodesmium H. Hong et al. 10.1126/science.aal2981
- Nitrogen fixation in two coastal upwelling regions of the Taiwan Strait Z. Wen et al. 10.1038/s41598-017-18006-5
- Herbicide monuron mediated alterations in carbon and nitrogen fixation in the cyanobacterium Nostoc muscorum Meg 1 M. Sachu et al. 10.1007/s10811-021-02449-5
- Unusual marine unicellular symbiosis with the nitrogen-fixing cyanobacterium UCYN-A J. Zehr et al. 10.1038/nmicrobiol.2016.214
- Global Marine N2 Fixation Estimates: From Observations to Models A. Landolfi et al. 10.3389/fmicb.2018.02112
- Effects of Ocean Acidification on Carbon and Nitrogen Fixation in the Hermatypic Coral Galaxea fascicularis X. Zheng et al. 10.3389/fmars.2021.644965
- Processes and Microorganisms Involved in the Marine Nitrogen Cycle: Knowledge and Gaps S. Pajares & R. Ramos 10.3389/fmars.2019.00739
- New insights into the ecology of the globally significant uncultured nitrogen-fixing symbiont UCYN-A H. Farnelid et al. 10.3354/ame01794
- Heterotrophic Bacteria Dominate the Diazotrophic Community in the Eastern Indian Ocean (EIO) during Pre-Southwest Monsoon C. Wu et al. 10.1007/s00248-019-01355-1
- A Review on Marine N2 Fixation: Mechanism, Evolution of Methodologies, Rates, and Future Concerns P. Bhavya et al. 10.1007/s12601-019-0037-3
- Dinitrogen Fixation Across Physico‐Chemical Gradients of the Eastern Tropical North Pacific Oxygen Deficient Zone C. Selden et al. 10.1029/2019GB006242
- Primary production and nitrogen assimilation rates from bay to offshore waters in the oyashio-kuroshio-Tsugaru Warm Current interfrontal region of the northwestern north Pacific Ocean T. Shiozaki et al. 10.1016/j.dsr.2020.103304
- Effect of light on N<sub>2</sub> fixation and net nitrogen release of <i>Trichodesmium</i> in a field study Y. Lu et al. 10.5194/bg-15-1-2018
- Evidence of high N<sub>2</sub> fixation rates in the temperate northeast Atlantic D. Fonseca-Batista et al. 10.5194/bg-16-999-2019
- Data‐Driven Modeling of the Distribution of Diazotrophs in the Global Ocean W. Tang & N. Cassar 10.1029/2019GL084376
- Gamma4: a genetically versatile Gammaproteobacterial nifH phylotype that is widely distributed in the North Pacific Ocean S. Cheung et al. 10.1111/1462-2920.15604
- Modelling N<sub>2</sub> fixation related to <i>Trichodesmium</i> sp.: driving processes and impacts on primary production in the tropical Pacific Ocean C. Dutheil et al. 10.5194/bg-15-4333-2018
- Nitrogen Fixation in the Intertidal Sediments of the Yangtze Estuary: Occurrence and Environmental Implications L. Hou et al. 10.1002/2018JG004418
- Dynamics of N<sub>2</sub> fixation and fate of diazotroph-derived nitrogen in a low-nutrient, low-chlorophyll ecosystem: results from the VAHINE mesocosm experiment (New Caledonia) S. Bonnet et al. 10.5194/bg-13-2653-2016
- Distribution of major diazotrophs in the surface water of the Kuroshio from northeastern Taiwan to south of mainland Japan T. Shiozaki et al. 10.1093/plankt/fby027
- Basin scale variability of active diazotrophs and nitrogen fixation in the North Pacific, from the tropics to the subarctic Bering Sea T. Shiozaki et al. 10.1002/2017GB005681
- Linkage Between Dinitrogen Fixation and Primary Production in the Oligotrophic South Pacific Ocean T. Shiozaki et al. 10.1029/2017GB005869
- Machine Learning Estimates of Global Marine Nitrogen Fixation W. Tang et al. 10.1029/2018JG004828
- Community and abundance of heterotrophic diazotrophs in the northern South China Sea: Revealing the potential importance of a new alphaproteobacterium in N2 fixation T. Chen et al. 10.1016/j.dsr.2018.11.006
- Released coral mucus does not enhance planktonic N2 fixation rates M. Camps et al. 10.3354/ame01787
- Diazotroph community structure and the role of nitrogen fixation in the nitrogen cycle in the Chukchi Sea (western Arctic Ocean) T. Shiozaki et al. 10.1002/lno.10933
- The reduction in the biomass of cyanobacterial N2 fixer and the biological pump in the Northwestern Pacific Ocean D. Kim et al. 10.1038/srep41810
- Distinct ecological niches of marine symbiotic N 2 ‐fixing cyanobacterium Candidatus Atelocyanobacterium thalassa sublineages K. Turk‐Kubo et al. 10.1111/jpy.12505
- New Perspectives on Nitrogen Fixation Measurements Using 15N2 Gas N. Wannicke et al. 10.3389/fmars.2018.00120
- Distribution of cyanobacteria and their interactions with pesticides in paddy field: A comprehensive review A. Singh et al. 10.1016/j.jenvman.2018.07.039
- UCYN-A/haptophyte symbioses dominate N2 fixation in the Southern California Current System K. Turk-Kubo et al. 10.1038/s43705-021-00039-7
- Biochemical and morphological fingerprints of isolated Anabaena sp.: a precious feedstock for food additives P. Nath et al. 10.1007/s13399-020-00651-y
- Nitrogen Fixation and Diazotroph Community in the Subarctic Sea of Japan and Sea of Okhotsk T. Sato et al. 10.1029/2020JC017071
- High Rates of N 2 Fixation in Temperate, Western North Atlantic Coastal Waters Expand the Realm of Marine Diazotrophy M. Mulholland et al. 10.1029/2018GB006130
- Temperate southern Australian coastal waters are characterised by surprisingly high rates of nitrogen fixation and diversity of diazotrophs L. Messer et al. 10.7717/peerj.10809
42 citations as recorded by crossref.
- Dissolved organic matter uptake by Trichodesmium in the Southwest Pacific M. Benavides et al. 10.1038/srep41315
- N<sub>2</sub> fixation as a dominant new N source in the western tropical South Pacific Ocean (OUTPACE cruise) M. Caffin et al. 10.5194/bg-15-2565-2018
- Decadal Variations in Hydroxy Fatty Acids Over Chichijima Island in the North Pacific: Long‐Term Seasonal Variability in Plant and Microbial Markers P. Bikkina et al. 10.1029/2020JD033347
- Nutrient regulation of biological nitrogen fixation across the tropical western North Pacific Z. Wen et al. 10.1126/sciadv.abl7564
- Dynamic Biological Functioning Important for Simulating and Stabilizing Ocean Biogeochemistry P. Buchanan et al. 10.1002/2017GB005753
- Biogeographic drivers of diazotrophs in the western Pacific Ocean M. Chen et al. 10.1002/lno.11123
- Nitrogen fixation in the eastern Atlantic reaches similar levels in the Southern and Northern Hemisphere D. Fonseca-Batista et al. 10.1002/2016JC012335
- Kuroshio Shape Composition and Distribution of Filamentous Diazotrophs in the East China Sea and Southern Yellow Sea Z. Jiang et al. 10.1029/2019JC015413
- The complex effects of ocean acidification on the prominent N 2 -fixing cyanobacterium Trichodesmium H. Hong et al. 10.1126/science.aal2981
- Nitrogen fixation in two coastal upwelling regions of the Taiwan Strait Z. Wen et al. 10.1038/s41598-017-18006-5
- Herbicide monuron mediated alterations in carbon and nitrogen fixation in the cyanobacterium Nostoc muscorum Meg 1 M. Sachu et al. 10.1007/s10811-021-02449-5
- Unusual marine unicellular symbiosis with the nitrogen-fixing cyanobacterium UCYN-A J. Zehr et al. 10.1038/nmicrobiol.2016.214
- Global Marine N2 Fixation Estimates: From Observations to Models A. Landolfi et al. 10.3389/fmicb.2018.02112
- Effects of Ocean Acidification on Carbon and Nitrogen Fixation in the Hermatypic Coral Galaxea fascicularis X. Zheng et al. 10.3389/fmars.2021.644965
- Processes and Microorganisms Involved in the Marine Nitrogen Cycle: Knowledge and Gaps S. Pajares & R. Ramos 10.3389/fmars.2019.00739
- New insights into the ecology of the globally significant uncultured nitrogen-fixing symbiont UCYN-A H. Farnelid et al. 10.3354/ame01794
- Heterotrophic Bacteria Dominate the Diazotrophic Community in the Eastern Indian Ocean (EIO) during Pre-Southwest Monsoon C. Wu et al. 10.1007/s00248-019-01355-1
- A Review on Marine N2 Fixation: Mechanism, Evolution of Methodologies, Rates, and Future Concerns P. Bhavya et al. 10.1007/s12601-019-0037-3
- Dinitrogen Fixation Across Physico‐Chemical Gradients of the Eastern Tropical North Pacific Oxygen Deficient Zone C. Selden et al. 10.1029/2019GB006242
- Primary production and nitrogen assimilation rates from bay to offshore waters in the oyashio-kuroshio-Tsugaru Warm Current interfrontal region of the northwestern north Pacific Ocean T. Shiozaki et al. 10.1016/j.dsr.2020.103304
- Effect of light on N<sub>2</sub> fixation and net nitrogen release of <i>Trichodesmium</i> in a field study Y. Lu et al. 10.5194/bg-15-1-2018
- Evidence of high N<sub>2</sub> fixation rates in the temperate northeast Atlantic D. Fonseca-Batista et al. 10.5194/bg-16-999-2019
- Data‐Driven Modeling of the Distribution of Diazotrophs in the Global Ocean W. Tang & N. Cassar 10.1029/2019GL084376
- Gamma4: a genetically versatile Gammaproteobacterial nifH phylotype that is widely distributed in the North Pacific Ocean S. Cheung et al. 10.1111/1462-2920.15604
- Modelling N<sub>2</sub> fixation related to <i>Trichodesmium</i> sp.: driving processes and impacts on primary production in the tropical Pacific Ocean C. Dutheil et al. 10.5194/bg-15-4333-2018
- Nitrogen Fixation in the Intertidal Sediments of the Yangtze Estuary: Occurrence and Environmental Implications L. Hou et al. 10.1002/2018JG004418
- Dynamics of N<sub>2</sub> fixation and fate of diazotroph-derived nitrogen in a low-nutrient, low-chlorophyll ecosystem: results from the VAHINE mesocosm experiment (New Caledonia) S. Bonnet et al. 10.5194/bg-13-2653-2016
- Distribution of major diazotrophs in the surface water of the Kuroshio from northeastern Taiwan to south of mainland Japan T. Shiozaki et al. 10.1093/plankt/fby027
- Basin scale variability of active diazotrophs and nitrogen fixation in the North Pacific, from the tropics to the subarctic Bering Sea T. Shiozaki et al. 10.1002/2017GB005681
- Linkage Between Dinitrogen Fixation and Primary Production in the Oligotrophic South Pacific Ocean T. Shiozaki et al. 10.1029/2017GB005869
- Machine Learning Estimates of Global Marine Nitrogen Fixation W. Tang et al. 10.1029/2018JG004828
- Community and abundance of heterotrophic diazotrophs in the northern South China Sea: Revealing the potential importance of a new alphaproteobacterium in N2 fixation T. Chen et al. 10.1016/j.dsr.2018.11.006
- Released coral mucus does not enhance planktonic N2 fixation rates M. Camps et al. 10.3354/ame01787
- Diazotroph community structure and the role of nitrogen fixation in the nitrogen cycle in the Chukchi Sea (western Arctic Ocean) T. Shiozaki et al. 10.1002/lno.10933
- The reduction in the biomass of cyanobacterial N2 fixer and the biological pump in the Northwestern Pacific Ocean D. Kim et al. 10.1038/srep41810
- Distinct ecological niches of marine symbiotic N 2 ‐fixing cyanobacterium Candidatus Atelocyanobacterium thalassa sublineages K. Turk‐Kubo et al. 10.1111/jpy.12505
- New Perspectives on Nitrogen Fixation Measurements Using 15N2 Gas N. Wannicke et al. 10.3389/fmars.2018.00120
- Distribution of cyanobacteria and their interactions with pesticides in paddy field: A comprehensive review A. Singh et al. 10.1016/j.jenvman.2018.07.039
- UCYN-A/haptophyte symbioses dominate N2 fixation in the Southern California Current System K. Turk-Kubo et al. 10.1038/s43705-021-00039-7
- Biochemical and morphological fingerprints of isolated Anabaena sp.: a precious feedstock for food additives P. Nath et al. 10.1007/s13399-020-00651-y
- Nitrogen Fixation and Diazotroph Community in the Subarctic Sea of Japan and Sea of Okhotsk T. Sato et al. 10.1029/2020JC017071
- High Rates of N 2 Fixation in Temperate, Western North Atlantic Coastal Waters Expand the Realm of Marine Diazotrophy M. Mulholland et al. 10.1029/2018GB006130
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Latest update: 19 Mar 2023
Short summary
We found that nitrogen fixation can proceed at high rates, depending on the season, in the temperate coastal region of the northwestern North Pacific. nifH sequences were omnipresent and recovered throughout the year. UCYN-A was a major diazotroph during summer, whereas Trichodesmium was abundant during fall, despite low temperatures. The Cluster III diazotrophs, putative anaerobic bacteria, were found at the surface throughout the year.
We found that nitrogen fixation can proceed at high rates, depending on the season, in the...
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