Articles | Volume 14, issue 11
https://doi.org/10.5194/bg-14-2741-2017
© Author(s) 2017. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
https://doi.org/10.5194/bg-14-2741-2017
© Author(s) 2017. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
Planktonic foraminifera-derived environmental DNA extracted from abyssal sediments preserves patterns of plankton macroecology
Raphaël Morard
CORRESPONDING AUTHOR
MARUM Center for Marine Environmental Sciences, University of Bremen, Leobener Strasse, 28359 Bremen, Germany
Franck Lejzerowicz
Department of Genetics and Evolution, University of Geneva, 1211 Geneva, Switzerland
Kate F. Darling
School of GeoSciences, University of Edinburgh, Edinburgh, EH9 3FE, UK
School of Geography and GeoSciences, University of St Andrews, Fife, KY16 9AL, UK
Béatrice Lecroq-Bennet
Okinawa Institute of Sciences and Technology Graduate University, 1919-1 Tancha, Onna-son 904-0495, Japan
Mikkel Winther Pedersen
Centre for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, Øster Voldgade 5-7, Copenhagen 1350K, Denmark
Ludovic Orlando
Centre for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, Øster Voldgade 5-7, Copenhagen 1350K, Denmark
Jan Pawlowski
Department of Genetics and Evolution, University of Geneva, 1211 Geneva, Switzerland
Stefan Mulitza
MARUM Center for Marine Environmental Sciences, University of Bremen, Leobener Strasse, 28359 Bremen, Germany
Colomban de Vargas
Centre National de la Recherche Scientifique, UMR7144, EPEP, Station Biologique de Roscoff, 29680 Roscoff, France
Sorbonne Universités, UPMC Univ Paris 06, UMR7144, Station Biologique de Roscoff, 29680 Roscoff, France
Michal Kucera
MARUM Center for Marine Environmental Sciences, University of Bremen, Leobener Strasse, 28359 Bremen, Germany
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We observed that living planktonic foraminifera had distinct vertically distributed communities across the Subtropical South Atlantic. In addition, a hierarchic alternation of environmental parameters was measured to control the distribution of planktonic foraminifer's species depending on the water depth. This implies that not only temperature but also productivity and subsurface processes are signed in fossil assemblages, which could be used to perform paleoceanographic reconstructions.
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Clim. Past, 19, 2027–2051, https://doi.org/10.5194/cp-19-2027-2023, https://doi.org/10.5194/cp-19-2027-2023, 2023
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J. Micropalaeontol., 42, 33–34, https://doi.org/10.5194/jm-42-33-2023, https://doi.org/10.5194/jm-42-33-2023, 2023
Pauline Cornuault, Thomas Westerhold, Heiko Pälike, Torsten Bickert, Karl-Heinz Baumann, and Michal Kucera
Biogeosciences, 20, 597–618, https://doi.org/10.5194/bg-20-597-2023, https://doi.org/10.5194/bg-20-597-2023, 2023
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We generated high-resolution records of carbonate accumulation rate from the Miocene to the Quaternary in the tropical Atlantic Ocean to characterize the variability in pelagic carbonate production during warm climates. It follows orbital cycles, responding to local changes in tropical conditions, as well as to long-term shifts in climate and ocean chemistry. These changes were sufficiently large to play a role in the carbon cycle and global climate evolution.
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Biogeosciences, 19, 4903–4927, https://doi.org/10.5194/bg-19-4903-2022, https://doi.org/10.5194/bg-19-4903-2022, 2022
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Stefan Mulitza, Torsten Bickert, Helen C. Bostock, Cristiano M. Chiessi, Barbara Donner, Aline Govin, Naomi Harada, Enqing Huang, Heather Johnstone, Henning Kuhnert, Michael Langner, Frank Lamy, Lester Lembke-Jene, Lorraine Lisiecki, Jean Lynch-Stieglitz, Lars Max, Mahyar Mohtadi, Gesine Mollenhauer, Juan Muglia, Dirk Nürnberg, André Paul, Carsten Rühlemann, Janne Repschläger, Rajeev Saraswat, Andreas Schmittner, Elisabeth L. Sikes, Robert F. Spielhagen, and Ralf Tiedemann
Earth Syst. Sci. Data, 14, 2553–2611, https://doi.org/10.5194/essd-14-2553-2022, https://doi.org/10.5194/essd-14-2553-2022, 2022
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Stable isotope ratios of foraminiferal shells from deep-sea sediments preserve key information on the variability of ocean circulation and ice volume. We present the first global atlas of harmonized raw downcore oxygen and carbon isotope ratios of various planktonic and benthic foraminiferal species. The atlas is a foundation for the analyses of the history of Earth system components, for finding future coring sites, and for teaching marine stratigraphy and paleoceanography.
Geert-Jan A. Brummer and Michal Kučera
J. Micropalaeontol., 41, 29–74, https://doi.org/10.5194/jm-41-29-2022, https://doi.org/10.5194/jm-41-29-2022, 2022
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Julie Meilland, Michael Siccha, Maike Kaffenberger, Jelle Bijma, and Michal Kucera
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André Paul, Stefan Mulitza, Rüdiger Stein, and Martin Werner
Clim. Past, 17, 805–824, https://doi.org/10.5194/cp-17-805-2021, https://doi.org/10.5194/cp-17-805-2021, 2021
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Markus Raitzsch, Jelle Bijma, Torsten Bickert, Michael Schulz, Ann Holbourn, and Michal Kučera
Clim. Past, 17, 703–719, https://doi.org/10.5194/cp-17-703-2021, https://doi.org/10.5194/cp-17-703-2021, 2021
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At approximately 14 Ma, the East Antarctic Ice Sheet expanded to almost its current extent, but the role of CO2 in this major climate transition is not entirely known. We show that atmospheric CO2 might have varied on 400 kyr cycles linked to the eccentricity of the Earth’s orbit. The resulting change in weathering and ocean carbon cycle affected atmospheric CO2 in a way that CO2 rose after Antarctica glaciated, helping to stabilize the climate system on its way to the “ice-house” world.
Catarina Cavaleiro, Antje H. L. Voelker, Heather Stoll, Karl-Heinz Baumann, and Michal Kucera
Clim. Past, 16, 2017–2037, https://doi.org/10.5194/cp-16-2017-2020, https://doi.org/10.5194/cp-16-2017-2020, 2020
Douglas Lessa, Raphaël Morard, Lukas Jonkers, Igor M. Venancio, Runa Reuter, Adrian Baumeister, Ana Luiza Albuquerque, and Michal Kucera
Biogeosciences, 17, 4313–4342, https://doi.org/10.5194/bg-17-4313-2020, https://doi.org/10.5194/bg-17-4313-2020, 2020
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We observed that living planktonic foraminifera had distinct vertically distributed communities across the Subtropical South Atlantic. In addition, a hierarchic alternation of environmental parameters was measured to control the distribution of planktonic foraminifer's species depending on the water depth. This implies that not only temperature but also productivity and subsurface processes are signed in fossil assemblages, which could be used to perform paleoceanographic reconstructions.
Lukas Jonkers, Olivier Cartapanis, Michael Langner, Nick McKay, Stefan Mulitza, Anne Strack, and Michal Kucera
Earth Syst. Sci. Data, 12, 1053–1081, https://doi.org/10.5194/essd-12-1053-2020, https://doi.org/10.5194/essd-12-1053-2020, 2020
Joanna Pawłowska, Magdalena Łącka, Małgorzata Kucharska, Jan Pawlowski, and Marek Zajączkowski
Clim. Past, 16, 487–501, https://doi.org/10.5194/cp-16-487-2020, https://doi.org/10.5194/cp-16-487-2020, 2020
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Paleoceanographic changes in Storfjorden during the Neoglacial (the last
4000 years) were reconstructed based on microfossil and ancient DNA records. Environmental changes were steered mainly by the interaction between the inflow of Atlantic Water (AW) and sea ice cover. Warming periods were associated with AW inflow and sea ice melting, stimulating primary production. The cold phases were characterized by densely packed sea ice, resulting in limited productivity.
Anna Jentzen, Joachim Schönfeld, Agnes K. M. Weiner, Manuel F. G. Weinkauf, Dirk Nürnberg, and Michal Kučera
J. Micropalaeontol., 38, 231–247, https://doi.org/10.5194/jm-38-231-2019, https://doi.org/10.5194/jm-38-231-2019, 2019
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The study assessed the population dynamics of living planktic foraminifers on a weekly, seasonal, and interannual timescale off the coast of Puerto Rico to improve our understanding of short- and long-term variations. The results indicate a seasonal change of the faunal composition, and over the last decades. Lower standing stocks and lower stable carbon isotope values of foraminifers in shallow waters can be linked to the hurricane Sandy, which passed the Greater Antilles during autumn 2012.
Michael Langner and Stefan Mulitza
Clim. Past, 15, 2067–2072, https://doi.org/10.5194/cp-15-2067-2019, https://doi.org/10.5194/cp-15-2067-2019, 2019
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Collections of paleoclimate data provide valuable information on the functioning of the Earth system but are often difficult to manage due to the inconsistency of data formats and reconstruction methods. We present a software toolbox that combines a simple document-based database with functionality for the visualization and management of marine proxy data. The program allows the efficient homogenization of larger paleoceanographic data sets into quality-controlled and transparent data products.
Mattia Greco, Lukas Jonkers, Kerstin Kretschmer, Jelle Bijma, and Michal Kucera
Biogeosciences, 16, 3425–3437, https://doi.org/10.5194/bg-16-3425-2019, https://doi.org/10.5194/bg-16-3425-2019, 2019
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To be able to interpret the paleoecological signal contained in N. pachyderma's shells, its habitat depth must be known. Our investigation on 104 density profiles of this species from the Arctic and North Atlantic shows that specimens reside closer to the surface when sea-ice and/or surface chlorophyll concentrations are high. This is in contrast with previous investigations that pointed at the position of the deep chlorophyll maximum as the main driver of N. pachyderma vertical distribution.
Haruka Takagi, Katsunori Kimoto, Tetsuichi Fujiki, Hiroaki Saito, Christiane Schmidt, Michal Kucera, and Kazuyoshi Moriya
Biogeosciences, 16, 3377–3396, https://doi.org/10.5194/bg-16-3377-2019, https://doi.org/10.5194/bg-16-3377-2019, 2019
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Photosymbiosis (endosymbiosis with algae) is an evolutionary important ecology for many marine organisms but has poorly been identified among planktonic foraminifera. In this study, we identified and characterized photosymbiosis of various species of planktonic foraminifera by focusing on their photosynthesis–related features. We finally proposed a new framework showing a potential strength of photosymbiosis, which will serve as a basis for future ecological studies of planktonic foraminifera.
Andreia Rebotim, Antje Helga Luise Voelker, Lukas Jonkers, Joanna J. Waniek, Michael Schulz, and Michal Kucera
J. Micropalaeontol., 38, 113–131, https://doi.org/10.5194/jm-38-113-2019, https://doi.org/10.5194/jm-38-113-2019, 2019
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To reconstruct subsurface water conditions using deep-dwelling planktonic foraminifera, we must fully understand how the oxygen isotope signal incorporates into their shell. We report δ18O in four species sampled in the eastern North Atlantic with plankton tows. We assess the size and crust effect on the isotopic δ18O and compared them with predictions from two equations. We reveal different patterns of calcite addition with depth, highlighting the need to perform species-specific calibrations.
Lukas Jonkers and Michal Kučera
Clim. Past, 15, 881–891, https://doi.org/10.5194/cp-15-881-2019, https://doi.org/10.5194/cp-15-881-2019, 2019
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Fossil plankton assemblages have been widely used to reconstruct SST. In such approaches, full taxonomic resolution is often used. We assess whether this is required for reliable reconstructions as some species may not respond to SST. We find that only a few species are needed for low reconstruction errors but that species selection has a pronounced effect on reconstructions. We suggest that the sensitivity of a reconstruction to species pruning can be used as a measure of its robustness.
Charlotte Breitkreuz, André Paul, Stefan Mulitza, Javier García-Pintado, and Michael Schulz
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2019-32, https://doi.org/10.5194/gmd-2019-32, 2019
Publication in GMD not foreseen
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We present a technique for ocean state estimation based on the combination of a simple data assimilation method with a state reduction approach. The technique proves to be very efficient and successful in reducing the model-data misfit and reconstructing a target ocean circulation from synthetic observations. In an application to Last Glacial Maximum proxy data the model-data misfit is greatly reduced but some misfit remains. Two different ocean states are found with similar model-data misfit.
Nadia Al-Sabouni, Isabel S. Fenton, Richard J. Telford, and Michal Kučera
J. Micropalaeontol., 37, 519–534, https://doi.org/10.5194/jm-37-519-2018, https://doi.org/10.5194/jm-37-519-2018, 2018
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In this study we investigate consistency in species-level identifications and whether disagreements are predictable. Overall, 21 researchers from across the globe identified sets of 300 specimens or digital images of planktonic foraminifera. Digital identifications tended to be more disparate. Participants trained by the same person often had more similar identifications. Disagreements hardly affected transfer-function temperature estimates but produced larger differences in diversity metrics.
Jeroen Groeneveld, Helena L. Filipsson, William E. N. Austin, Kate Darling, David McCarthy, Nadine B. Quintana Krupinski, Clare Bird, and Magali Schweizer
J. Micropalaeontol., 37, 403–429, https://doi.org/10.5194/jm-37-403-2018, https://doi.org/10.5194/jm-37-403-2018, 2018
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Current climate and environmental changes strongly affect shallow marine and coastal areas like the Baltic Sea. The combination of foraminiferal geochemistry and environmental parameters demonstrates that in a highly variable setting like the Baltic Sea, it is possible to separate different environmental impacts on the foraminiferal assemblages and therefore use chemical factors to reconstruct how seawater temperature, salinity, and oxygen varied in the past and may vary in the future.
Kerstin Kretschmer, Lukas Jonkers, Michal Kucera, and Michael Schulz
Biogeosciences, 15, 4405–4429, https://doi.org/10.5194/bg-15-4405-2018, https://doi.org/10.5194/bg-15-4405-2018, 2018
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The fossil shells of planktonic foraminifera are widely used to reconstruct past climate conditions. To do so, information about their seasonal and vertical habitat is needed. Here we present an updated version of a planktonic foraminifera model to better understand species-specific habitat dynamics under climate change. This model produces spatially and temporally coherent distribution patterns, which agree well with available observations, and can thus aid the interpretation of proxy records.
Rike Völpel, André Paul, Annegret Krandick, Stefan Mulitza, and Michael Schulz
Geosci. Model Dev., 10, 3125–3144, https://doi.org/10.5194/gmd-10-3125-2017, https://doi.org/10.5194/gmd-10-3125-2017, 2017
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This study presents the implementation of stable water isotopes in the MITgcm and describes the results of an equilibrium simulation under pre-industrial conditions. The model compares well to observational data and measurements of plankton tow records and thus opens wide prospects for long-term simulations in a paleoclimatic context.
Lukas Jonkers and Michal Kučera
Clim. Past, 13, 573–586, https://doi.org/10.5194/cp-13-573-2017, https://doi.org/10.5194/cp-13-573-2017, 2017
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Planktonic foraminifera – the most important proxy carriers in palaeoceanography – adjust their seasonal and vertical habitat. They are thought to do so in a way that minimises the change in their environment, implying that proxy records based on these organisms may not capture the full amplitude of past climate change. Here we demonstrate that they indeed track a particular thermal habitat and suggest that this could lead to a 40 % underestimation of reconstructed temperature change.
Philipp M. Munz, Stephan Steinke, Anna Böll, Andreas Lückge, Jeroen Groeneveld, Michal Kucera, and Hartmut Schulz
Clim. Past, 13, 491–509, https://doi.org/10.5194/cp-13-491-2017, https://doi.org/10.5194/cp-13-491-2017, 2017
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We present the results of several independent proxies of summer SST and upwelling SST from the Oman margin indicative of monsoon strength during the early Holocene. In combination with indices of carbonate preservation and bottom water redox conditions, we demonstrate that a persistent solar influence was modulating summer monsoon intensity. Furthermore, bottom water conditions are linked to atmospheric forcing, rather than changes of intermediate water masses.
Shuwen Sun, Enno Schefuß, Stefan Mulitza, Cristiano M. Chiessi, André O. Sawakuchi, Matthias Zabel, Paul A. Baker, Jens Hefter, and Gesine Mollenhauer
Biogeosciences, 14, 2495–2512, https://doi.org/10.5194/bg-14-2495-2017, https://doi.org/10.5194/bg-14-2495-2017, 2017
Clare Bird, Kate F. Darling, Ann D. Russell, Catherine V. Davis, Jennifer Fehrenbacher, Andrew Free, Michael Wyman, and Bryne T. Ngwenya
Biogeosciences, 14, 901–920, https://doi.org/10.5194/bg-14-901-2017, https://doi.org/10.5194/bg-14-901-2017, 2017
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Accurate ecological data on planktic foraminifera (calcifying microbes that play an important role in the carbon cycle) are important for modelling their response to climate change. We studied the species G. bulloides. A lack of algal symbionts and unusual shell chemistry suggest a different life history compared to other spinose species. We demonstrate that G. bulloides hosts cyanobacterial endobionts. This has implications for modelling this species and for understanding its shell chemistry.
Andreia Rebotim, Antje H. L. Voelker, Lukas Jonkers, Joanna J. Waniek, Helge Meggers, Ralf Schiebel, Igaratza Fraile, Michael Schulz, and Michal Kucera
Biogeosciences, 14, 827–859, https://doi.org/10.5194/bg-14-827-2017, https://doi.org/10.5194/bg-14-827-2017, 2017
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Planktonic foraminifera species depth habitat remains poorly constrained and the existing conceptual models are not sufficiently tested by observational data. Here we present a synthesis of living planktonic foraminifera abundance data in the subtropical eastern North Atlantic from vertical plankton tows. We also test potential environmental factors influencing the species depth habitat and investigate yearly or lunar migration cycles. These findings may impact paleoceanographic studies.
Joanna Pawłowska, Marek Zajączkowski, Magdalena Łącka, Franck Lejzerowicz, Philippe Esling, and Jan Pawlowski
Clim. Past, 12, 1459–1472, https://doi.org/10.5194/cp-12-1459-2016, https://doi.org/10.5194/cp-12-1459-2016, 2016
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The presented study focuses on the last millennium of the palaeoclimatic history of Svalbard region. The investigation was based on classical palaeoceanographic proxies, strengthened by the analysis of ancient foraminiferal DNA in down-core sediment samples. This study is the first attempt to implement the aDNA record in the palaeoenvironmental reconstruction. The aDNA data revealed even small environmetal changes that were not evidenced in the sedimentological and micropalaeontological record.
L. Jonkers and M. Kučera
Biogeosciences, 12, 2207–2226, https://doi.org/10.5194/bg-12-2207-2015, https://doi.org/10.5194/bg-12-2207-2015, 2015
I. Hessler, S. P. Harrison, M. Kucera, C. Waelbroeck, M.-T. Chen, C. Anderson, A. de Vernal, B. Fréchette, A. Cloke-Hayes, G. Leduc, and L. Londeix
Clim. Past, 10, 2237–2252, https://doi.org/10.5194/cp-10-2237-2014, https://doi.org/10.5194/cp-10-2237-2014, 2014
A. J. Enge, U. Witte, M. Kucera, and P. Heinz
Biogeosciences, 11, 2017–2026, https://doi.org/10.5194/bg-11-2017-2014, https://doi.org/10.5194/bg-11-2017-2014, 2014
M. F. G. Weinkauf, T. Moller, M. C. Koch, and M. Kučera
Biogeosciences, 10, 6639–6655, https://doi.org/10.5194/bg-10-6639-2013, https://doi.org/10.5194/bg-10-6639-2013, 2013
Y. Milker, R. Rachmayani, M. F. G. Weinkauf, M. Prange, M. Raitzsch, M. Schulz, and M. Kučera
Clim. Past, 9, 2231–2252, https://doi.org/10.5194/cp-9-2231-2013, https://doi.org/10.5194/cp-9-2231-2013, 2013
J. A. Collins, A. Govin, S. Mulitza, D. Heslop, M. Zabel, J. Hartmann, U. Röhl, and G. Wefer
Clim. Past, 9, 1181–1191, https://doi.org/10.5194/cp-9-1181-2013, https://doi.org/10.5194/cp-9-1181-2013, 2013
R. J. Telford, C. Li, and M. Kucera
Clim. Past, 9, 859–870, https://doi.org/10.5194/cp-9-859-2013, https://doi.org/10.5194/cp-9-859-2013, 2013
Related subject area
Biodiversity and Ecosystem Function: Paleo
Palaeoecology of ungulates in northern Iberia during the Late Pleistocene through isotopic analysis of teeth
Reply to Head's comment on “The Volyn biota (Ukraine) – indications of 1.5 Gyr old eukaryotes in 3D preservation, a spotlight on the `boring billion' ” by Franz et al. (2023)
Comment on “The Volyn biota (Ukraine) – indications of 1.5 Gyr old eukaryotes in 3D preservation, a spotlight on the `boring billion' ” by Franz et al. (2023)
Rates of palaeoecological change can inform ecosystem restoration
Paleoecology and evolutionary response of planktonic foraminifera to the mid-Pliocene Warm Period and Plio-Pleistocene bipolar ice sheet expansion
Late Neogene evolution of modern deep-dwelling plankton
Photosynthetic activity in Devonian Foraminifera
Microbial activity, methane production, and carbon storage in Early Holocene North Sea peats
Ecosystem regimes and responses in a coupled ancient lake system from MIS 5b to present: the diatom record of lakes Ohrid and Prespa
Metagenomic analyses of the late Pleistocene permafrost – additional tools for reconstruction of environmental conditions
Differential resilience of ancient sister lakes Ohrid and Prespa to environmental disturbances during the Late Pleistocene
Stable isotope study of a new chondrichthyan fauna (Kimmeridgian, Porrentruy, Swiss Jura): an unusual freshwater-influenced isotopic composition for the hybodont shark Asteracanthus
Amelioration of marine environments at the Smithian–Spathian boundary, Early Triassic
Weathering by tree-root-associating fungi diminishes under simulated Cenozoic atmospheric CO2 decline
The impact of land-use change on floristic diversity at regional scale in southern Sweden 600 BC–AD 2008
Climate-related changes in peatland carbon accumulation during the last millennium
Stratigraphy and paleoenvironments of the early to middle Holocene Chipalamawamba Beds (Malawi Basin, Africa)
Experimental mineralization of crustacean eggs: new implications for the fossilization of Precambrian–Cambrian embryos
The last glacial-interglacial cycle in Lake Ohrid (Macedonia/Albania): testing diatom response to climate
Mónica Fernández-García, Sarah Pederzani, Kate Britton, Lucía Agudo-Pérez, Andrea Cicero, Jeanne Marie Geiling, Joan Daura, Montserrat Sanz, and Ana B. Marín-Arroyo
Biogeosciences, 21, 4413–4437, https://doi.org/10.5194/bg-21-4413-2024, https://doi.org/10.5194/bg-21-4413-2024, 2024
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Significant climatic changes affected Europe's vegetation and fauna, affecting human subsistence strategies during the Late Pleistocene. Reconstructing the local conditions humans faced is essential to understanding their adaptation processes and resilience. This study analyses the chemical composition of the teeth of herbivores consumed by humans 80,000 to 15,000 years ago, revealing the ecology of ungulates in northern Iberia and thus the palaeoenvironment humans exploited.
Gerhard Franz, Vladimir Khomenko, Peter Lyckberg, Vsevolod Chournousenko, and Ulrich Struck
Biogeosciences, 21, 4119–4131, https://doi.org/10.5194/bg-21-4119-2024, https://doi.org/10.5194/bg-21-4119-2024, 2024
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The Volyn biota (Ukraine), previously assumed to be an extreme case of natural abiotic synthesis of organic matter, is more likely a diverse assemblage of fossils from the deep biosphere. Although contamination by modern organisms cannot completely be ruled out, it is unlikely, considering all aspects, i.e., their mode of occurrence in the deep biosphere, their fossilization and mature state of organic matter, their isotope signature, and their large morphological diversity.
Martin J. Head, James B. Riding, Jennifer M. K. O'Keefe, Julius Jeiter, and Julia Gravendyck
Biogeosciences, 21, 1773–1783, https://doi.org/10.5194/bg-21-1773-2024, https://doi.org/10.5194/bg-21-1773-2024, 2024
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A diverse suite of “fossils” associated with the ~1.5 Ga Volyn (Ukraine) kerite was published recently. We show that at least some of them represent modern contamination including plant hairs, pollen, and likely later fungal growth. Comparable diversity is shown to exist in moderm museum dust, calling into question whether any part of the Volyn biota is of biological origin while emphasising the need for scrupulous care in collecting, analysing, and identifying Precambrian microfossils.
Walter Finsinger, Christian Bigler, Christoph Schwörer, and Willy Tinner
Biogeosciences, 21, 1629–1638, https://doi.org/10.5194/bg-21-1629-2024, https://doi.org/10.5194/bg-21-1629-2024, 2024
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Rate-of-change records based on compositional data are ambiguous as they may rise irrespective of the underlying trajectory of ecosystems. We emphasize the importance of characterizing both the direction and the rate of palaeoecological changes in terms of key features of ecosystems rather than solely on community composition. Past accelerations of community transformation may document the potential of ecosystems to rapidly recover important ecological attributes and functions.
Adam Woodhouse, Frances A. Procter, Sophie L. Jackson, Robert A. Jamieson, Robert J. Newton, Philip F. Sexton, and Tracy Aze
Biogeosciences, 20, 121–139, https://doi.org/10.5194/bg-20-121-2023, https://doi.org/10.5194/bg-20-121-2023, 2023
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This study looked into the regional and global response of planktonic foraminifera to the climate over the last 5 million years, when the Earth cooled significantly. These single celled organisms exhibit the best fossil record available to science. We document an abundance switch from warm water to cold water species as the Earth cooled. Moreover, a closer analysis of certain species may indicate higher fossil diversity than previously thought, which has implications for evolutionary studies.
Flavia Boscolo-Galazzo, Amy Jones, Tom Dunkley Jones, Katherine A. Crichton, Bridget S. Wade, and Paul N. Pearson
Biogeosciences, 19, 743–762, https://doi.org/10.5194/bg-19-743-2022, https://doi.org/10.5194/bg-19-743-2022, 2022
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Deep-living organisms are a major yet poorly known component of ocean biomass. Here we reconstruct the evolution of deep-living zooplankton and phytoplankton. Deep-dwelling zooplankton and phytoplankton did not occur 15 Myr ago, when the ocean was several degrees warmer than today. Deep-dwelling species first evolve around 7.5 Myr ago, following global climate cooling. Their evolution was driven by colder ocean temperatures allowing more food, oxygen, and light at depth.
Zofia Dubicka, Maria Gajewska, Wojciech Kozłowski, Pamela Hallock, and Johann Hohenegger
Biogeosciences, 18, 5719–5728, https://doi.org/10.5194/bg-18-5719-2021, https://doi.org/10.5194/bg-18-5719-2021, 2021
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Benthic foraminifera play a significant role in modern reefal ecosystems mainly due to their symbiosis with photosynthetic microorganisms. Foraminifera were also components of Devonian stromatoporoid coral reefs; however, whether they could have harbored symbionts has remained unclear. We show that Devonian foraminifera may have stayed photosynthetically active, which likely had an impact on their evolutionary radiation and possibly also on the functioning of Paleozoic shallow marine ecosystems.
Tanya J. R. Lippmann, Michiel H. in 't Zandt, Nathalie N. L. Van der Putten, Freek S. Busschers, Marc P. Hijma, Pieter van der Velden, Tim de Groot, Zicarlo van Aalderen, Ove H. Meisel, Caroline P. Slomp, Helge Niemann, Mike S. M. Jetten, Han A. J. Dolman, and Cornelia U. Welte
Biogeosciences, 18, 5491–5511, https://doi.org/10.5194/bg-18-5491-2021, https://doi.org/10.5194/bg-18-5491-2021, 2021
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This paper is a step towards understanding the basal peat ecosystem beneath the North Sea. Plant remains followed parallel sequences. Methane concentrations were low with local exceptions, with the source likely being trapped pockets of millennia-old methane. Microbial community structure indicated the absence of a biofilter and was diverse across sites. Large carbon stores in the presence of methanogens and in the absence of methanotrophs have the potential to be metabolized into methane.
Aleksandra Cvetkoska, Elena Jovanovska, Alexander Francke, Slavica Tofilovska, Hendrik Vogel, Zlatko Levkov, Timme H. Donders, Bernd Wagner, and Friederike Wagner-Cremer
Biogeosciences, 13, 3147–3162, https://doi.org/10.5194/bg-13-3147-2016, https://doi.org/10.5194/bg-13-3147-2016, 2016
Elizaveta Rivkina, Lada Petrovskaya, Tatiana Vishnivetskaya, Kirill Krivushin, Lyubov Shmakova, Maria Tutukina, Arthur Meyers, and Fyodor Kondrashov
Biogeosciences, 13, 2207–2219, https://doi.org/10.5194/bg-13-2207-2016, https://doi.org/10.5194/bg-13-2207-2016, 2016
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A comparative analysis of the metagenomes from two 30,000-year-old permafrost samples, one of lake-alluvial origin and the other from late Pleistocene Ice Complex sediments, revealed significant differences within microbial communities. The late Pleistocene Ice Complex sediments (which are characterized by the absence of methane with lower values of redox potential and Fe2+ content) showed both a low abundance of methanogenic archaea and enzymes from the carbon, nitrogen, and sulfur cycles.
Elena Jovanovska, Aleksandra Cvetkoska, Torsten Hauffe, Zlatko Levkov, Bernd Wagner, Roberto Sulpizio, Alexander Francke, Christian Albrecht, and Thomas Wilke
Biogeosciences, 13, 1149–1161, https://doi.org/10.5194/bg-13-1149-2016, https://doi.org/10.5194/bg-13-1149-2016, 2016
L. Leuzinger, L. Kocsis, J.-P. Billon-Bruyat, S. Spezzaferri, and T. Vennemann
Biogeosciences, 12, 6945–6954, https://doi.org/10.5194/bg-12-6945-2015, https://doi.org/10.5194/bg-12-6945-2015, 2015
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We measured the oxygen isotopic composition of Late Jurassic chondrichthyan teeth (sharks, rays, chimaeras) from the Swiss Jura to get ecological information. The main finding is that the extinct shark Asteracanthus (Hybodontiformes) could inhabit reduced salinity areas, although previous studies on other European localities always resulted in a clear marine isotopic signal for this genus. We propose a mainly marine ecology coupled with excursions into areas of lower salinity in our study site.
L. Zhang, L. Zhao, Z.-Q. Chen, T. J. Algeo, Y. Li, and L. Cao
Biogeosciences, 12, 1597–1613, https://doi.org/10.5194/bg-12-1597-2015, https://doi.org/10.5194/bg-12-1597-2015, 2015
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The Smithian--Spathian boundary was a key event in the recovery of marine environments and ecosystems following the end-Permian mass extinction ~1.5 million years earlier. Our analysis of the Shitouzhai section in South China reveals major changes in oceanographic conditions at the SSB intensification of oceanic circulation leading to enhanced upwelling of nutrient- and sulfide-rich deep waters and coinciding with an abrupt cooling that terminated the Early Triassic hothouse climate.
J. Quirk, J. R. Leake, S. A. Banwart, L. L. Taylor, and D. J. Beerling
Biogeosciences, 11, 321–331, https://doi.org/10.5194/bg-11-321-2014, https://doi.org/10.5194/bg-11-321-2014, 2014
D. Fredh, A. Broström, M. Rundgren, P. Lagerås, F. Mazier, and L. Zillén
Biogeosciences, 10, 3159–3173, https://doi.org/10.5194/bg-10-3159-2013, https://doi.org/10.5194/bg-10-3159-2013, 2013
D. J. Charman, D. W. Beilman, M. Blaauw, R. K. Booth, S. Brewer, F. M. Chambers, J. A. Christen, A. Gallego-Sala, S. P. Harrison, P. D. M. Hughes, S. T. Jackson, A. Korhola, D. Mauquoy, F. J. G. Mitchell, I. C. Prentice, M. van der Linden, F. De Vleeschouwer, Z. C. Yu, J. Alm, I. E. Bauer, Y. M. C. Corish, M. Garneau, V. Hohl, Y. Huang, E. Karofeld, G. Le Roux, J. Loisel, R. Moschen, J. E. Nichols, T. M. Nieminen, G. M. MacDonald, N. R. Phadtare, N. Rausch, Ü. Sillasoo, G. T. Swindles, E.-S. Tuittila, L. Ukonmaanaho, M. Väliranta, S. van Bellen, B. van Geel, D. H. Vitt, and Y. Zhao
Biogeosciences, 10, 929–944, https://doi.org/10.5194/bg-10-929-2013, https://doi.org/10.5194/bg-10-929-2013, 2013
B. Van Bocxlaer, W. Salenbien, N. Praet, and J. Verniers
Biogeosciences, 9, 4497–4512, https://doi.org/10.5194/bg-9-4497-2012, https://doi.org/10.5194/bg-9-4497-2012, 2012
D. Hippler, N. Hu, M. Steiner, G. Scholtz, and G. Franz
Biogeosciences, 9, 1765–1775, https://doi.org/10.5194/bg-9-1765-2012, https://doi.org/10.5194/bg-9-1765-2012, 2012
J. M. Reed, A. Cvetkoska, Z. Levkov, H. Vogel, and B. Wagner
Biogeosciences, 7, 3083–3094, https://doi.org/10.5194/bg-7-3083-2010, https://doi.org/10.5194/bg-7-3083-2010, 2010
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Short summary
The exploitation of deep-sea sedimentary archive relies on the recovery of mineralized skeletons of pelagic organisms. Planktonic groups leaving preserved remains represent only a fraction of the total marine diversity. Environmental DNA left by non-fossil organisms is a promising source of information for paleo-reconstructions. Here we show how planktonic-derived environmental DNA preserves ecological structure of planktonic communities. We use planktonic foraminifera as a case study.
The exploitation of deep-sea sedimentary archive relies on the recovery of mineralized skeletons...
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