Articles | Volume 17, issue 20
https://doi.org/10.5194/bg-17-5209-2020
© Author(s) 2020. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/bg-17-5209-2020
© Author(s) 2020. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Research article
| 
29 Oct 2020
Research article |
| 29 Oct 2020
| 29 Oct 2020
Methane paradox in tropical lakes? Sedimentary fluxes rather than pelagic production in oxic conditions sustain methanotrophy and emissions to the atmosphere
Cédric Morana
CORRESPONDING AUTHOR
KU Leuven, Leuven, Belgium
Université de Liège, Liège, Belgium
Steven Bouillon
KU Leuven, Leuven, Belgium
Vimac Nolla-Ardèvol
KU Leuven, Leuven, Belgium
Fleur A. E. Roland
Université de Liège, Liège, Belgium
William Okello
National Fisheries Resources Research Institute, Jinja, Uganda
Jean-Pierre Descy
Université de Liège, Liège, Belgium
Angela Nankabirwa
National Fisheries Resources Research Institute, Jinja, Uganda
Erina Nabafu
National Fisheries Resources Research Institute, Jinja, Uganda
Dirk Springael
KU Leuven, Leuven, Belgium
Alberto V. Borges
Université de Liège, Liège, Belgium
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Thomas Bauduin, Nathalie Gypens, and Alberto V. Borges
EGUsphere, https://doi.org/10.5194/egusphere-2024-1315, https://doi.org/10.5194/egusphere-2024-1315, 2024
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Greenhouse gases (GHG) emissions from ponds can vary depending on the state of ponds (clear-water with macrophytes or turbid-water with phytoplankton). We studied CO2, CH4, and N2O emissions in clear and turbid urban ponds (June 2021 to December 2023) in Brussels. We observed seasonal differences in methanogenesis pathways, in CH4 emissions between clear and turbid ponds, and annual differences in total emissions of GHG, likely from intense El Niño event in 2023.
Christian Lønborg, Cátia Carreira, Gwenaël Abril, Susana Agustí, Valentina Amaral, Agneta Andersson, Javier Arístegui, Punyasloke Bhadury, Mariana B. Bif, Alberto V. Borges, Steven Bouillon, Maria Ll. Calleja, Luiz C. Cotovicz Jr., Stefano Cozzi, Maryló Doval, Carlos M. Duarte, Bradley Eyre, Cédric G. Fichot, E. Elena García-Martín, Alexandra Garzon-Garcia, Michele Giani, Rafael Gonçalves-Araujo, Renee Gruber, Dennis A. Hansell, Fuminori Hashihama, Ding He, Johnna M. Holding, William R. Hunter, J. Severino P. Ibánhez, Valeria Ibello, Shan Jiang, Guebuem Kim, Katja Klun, Piotr Kowalczuk, Atsushi Kubo, Choon-Weng Lee, Cláudia B. Lopes, Federica Maggioni, Paolo Magni, Celia Marrase, Patrick Martin, S. Leigh McCallister, Roisin McCallum, Patricia M. Medeiros, Xosé Anxelu G. Morán, Frank E. Muller-Karger, Allison Myers-Pigg, Marit Norli, Joanne M. Oakes, Helena Osterholz, Hyekyung Park, Maria Lund Paulsen, Judith A. Rosentreter, Jeff D. Ross, Digna Rueda-Roa, Chiara Santinelli, Yuan Shen, Eva Teira, Tinkara Tinta, Guenther Uher, Masahide Wakita, Nicholas Ward, Kenta Watanabe, Yu Xin, Youhei Yamashita, Liyang Yang, Jacob Yeo, Huamao Yuan, Qiang Zheng, and Xosé Antón Álvarez-Salgado
Earth Syst. Sci. Data, 16, 1107–1119, https://doi.org/10.5194/essd-16-1107-2024, https://doi.org/10.5194/essd-16-1107-2024, 2024
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In this paper, we present the first edition of a global database compiling previously published and unpublished measurements of dissolved organic matter (DOM) collected in coastal waters (CoastDOM v1). Overall, the CoastDOM v1 dataset will be useful to identify global spatial and temporal patterns and to facilitate reuse in studies aimed at better characterizing local biogeochemical processes and identifying a baseline for modelling future changes in coastal waters.
Vao Fenotiana Razanamahandry, Marjolein Dewaele, Gerard Govers, Liesa Brosens, Benjamin Campforts, Liesbet Jacobs, Tantely Razafimbelo, Tovonarivo Rafolisy, and Steven Bouillon
Biogeosciences, 19, 3825–3841, https://doi.org/10.5194/bg-19-3825-2022, https://doi.org/10.5194/bg-19-3825-2022, 2022
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In order to shed light on possible past vegetation shifts in the Central Highlands of Madagascar, we measured stable isotope ratios of organic carbon in soil profiles along both forested and grassland hillslope transects in the Lake Alaotra region. Our results show that the landscape of this region was more forested in the past: soils in the C4-dominated grasslands contained a substantial fraction of C3-derived carbon, increasing with depth.
Rey Harvey Suello, Simon Lucas Hernandez, Steven Bouillon, Jean-Philippe Belliard, Luis Dominguez-Granda, Marijn Van de Broek, Andrea Mishell Rosado Moncayo, John Ramos Veliz, Karem Pollette Ramirez, Gerard Govers, and Stijn Temmerman
Biogeosciences, 19, 1571–1585, https://doi.org/10.5194/bg-19-1571-2022, https://doi.org/10.5194/bg-19-1571-2022, 2022
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This research shows indications that the age of the mangrove forest and its position along a deltaic gradient (upstream–downstream) play a vital role in the amount and sources of carbon stored in the mangrove sediments. Our findings also imply that carbon capture by the mangrove ecosystem itself contributes partly but relatively little to long-term sediment organic carbon storage. This finding is particularly relevant for budgeting the potential of mangrove ecosystems to mitigate climate change.
Man Zhao, Liesbet Jacobs, Steven Bouillon, and Gerard Govers
Biogeosciences, 18, 1511–1523, https://doi.org/10.5194/bg-18-1511-2021, https://doi.org/10.5194/bg-18-1511-2021, 2021
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We investigate the relative importance of two individual factors (hydrodynamical disturbance and aquatic microbial community) that possibly control SOC decomposition rates in river systems. We found aquatic microbial organisms led to rapid SOC decomposition, while effect of mechanical disturbance is relative minor. We propose a simple conceptual model: hydrodynamic disturbance is only important when soil aggregates are strong enough to withstand the disruptive forces imposed by water immersions.
Samuel T. Wilson, Alia N. Al-Haj, Annie Bourbonnais, Claudia Frey, Robinson W. Fulweiler, John D. Kessler, Hannah K. Marchant, Jana Milucka, Nicholas E. Ray, Parvadha Suntharalingam, Brett F. Thornton, Robert C. Upstill-Goddard, Thomas S. Weber, Damian L. Arévalo-Martínez, Hermann W. Bange, Heather M. Benway, Daniele Bianchi, Alberto V. Borges, Bonnie X. Chang, Patrick M. Crill, Daniela A. del Valle, Laura Farías, Samantha B. Joye, Annette Kock, Jabrane Labidi, Cara C. Manning, John W. Pohlman, Gregor Rehder, Katy J. Sparrow, Philippe D. Tortell, Tina Treude, David L. Valentine, Bess B. Ward, Simon Yang, and Leonid N. Yurganov
Biogeosciences, 17, 5809–5828, https://doi.org/10.5194/bg-17-5809-2020, https://doi.org/10.5194/bg-17-5809-2020, 2020
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The oceans are a net source of the major greenhouse gases; however there has been little coordination of oceanic methane and nitrous oxide measurements. The scientific community has recently embarked on a series of capacity-building exercises to improve the interoperability of dissolved methane and nitrous oxide measurements. This paper derives from a workshop which discussed the challenges and opportunities for oceanic methane and nitrous oxide research in the near future.
Clare Woulds, James B. Bell, Adrian G. Glover, Steven Bouillon, and Louise S. Brown
Biogeosciences, 17, 1–12, https://doi.org/10.5194/bg-17-1-2020, https://doi.org/10.5194/bg-17-1-2020, 2020
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Sedimented hydrothermal vents occur where heated, mineral-rich (hydrothermal) water seeps through seafloor sediments. They host chemosynthetic microbes, which use chemical energy to fix dissolved carbon dioxide into sugars (chemosynthesis). We conducted carbon tracing experiments, and observed chemosynthesis at both vent and non-vent sites. Thus, chemosynthesis occurred over a much larger area than expected, suggesting it is more widespread than previously thought.
Alberto V. Borges, François Darchambeau, Thibault Lambert, Cédric Morana, George H. Allen, Ernest Tambwe, Alfred Toengaho Sembaito, Taylor Mambo, José Nlandu Wabakhangazi, Jean-Pierre Descy, Cristian R. Teodoru, and Steven Bouillon
Biogeosciences, 16, 3801–3834, https://doi.org/10.5194/bg-16-3801-2019, https://doi.org/10.5194/bg-16-3801-2019, 2019
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Tropical rivers might be strong sources of CO2 and CH4 to the atmosphere, although there is an enormous data gap. The origin of CO2 in lowland tropical rivers is not well characterized and can be from terra firme or from wetlands (flooded forests and aquatic macrophytes). We obtained a large field dataset of CO2, CH4 and N2O in the Congo, the second-largest river in the world, which allows us to quantity the emission of these greenhouse gases to the atmosphere and investigate their origin.
Gwenaël Abril and Alberto V. Borges
Biogeosciences, 16, 769–784, https://doi.org/10.5194/bg-16-769-2019, https://doi.org/10.5194/bg-16-769-2019, 2019
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Based on classical concepts in ecology, and a literature survey, we highlight the importance of flooded land as a preferential source of atmospheric carbon to aquatic systems at the global scale. Studies in terrestrial and aquatic ecosystems could be reconciled by considering the occurrence of an efficient wetland CO2 pump to river systems. New methodological approaches coupling hydrology and ecology are also necessary to improve scientific knowledge on carbon fluxes at the land–water interface.
Samuel T. Wilson, Hermann W. Bange, Damian L. Arévalo-Martínez, Jonathan Barnes, Alberto V. Borges, Ian Brown, John L. Bullister, Macarena Burgos, David W. Capelle, Michael Casso, Mercedes de la Paz, Laura Farías, Lindsay Fenwick, Sara Ferrón, Gerardo Garcia, Michael Glockzin, David M. Karl, Annette Kock, Sarah Laperriere, Cliff S. Law, Cara C. Manning, Andrew Marriner, Jukka-Pekka Myllykangas, John W. Pohlman, Andrew P. Rees, Alyson E. Santoro, Philippe D. Tortell, Robert C. Upstill-Goddard, David P. Wisegarver, Gui-Ling Zhang, and Gregor Rehder
Biogeosciences, 15, 5891–5907, https://doi.org/10.5194/bg-15-5891-2018, https://doi.org/10.5194/bg-15-5891-2018, 2018
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To determine the variability between independent measurements of dissolved methane and nitrous oxide, seawater samples were analyzed by multiple laboratories. The results revealed the influences of the different parts of the analytical process, from the initial sample collection to the calculation of the final concentrations. Recommendations are made to improve dissolved methane and nitrous oxide measurements to help preclude future analytical discrepancies between laboratories.
Trent R. Marwick, Fredrick Tamooh, Bernard Ogwoka, Alberto V. Borges, François Darchambeau, and Steven Bouillon
Biogeosciences, 15, 1683–1700, https://doi.org/10.5194/bg-15-1683-2018, https://doi.org/10.5194/bg-15-1683-2018, 2018
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A 2-year biogeochemical record provides annual sediment and element flux estimates for the non-dammed Sabaki River, Kenya, establishing a baseline for future research in light of impending construction of the first major upstream reservoir. Over 80 % of material fluxes occur across the wet season, with annual yields comparable to the adjacent, and dammed, Tana River. Observations at low-flow periods suggest large mammalian herbivores may be vectors of terrestrial subsidies to the water column.
Alberto V. Borges, Gwenaël Abril, and Steven Bouillon
Biogeosciences, 15, 1093–1114, https://doi.org/10.5194/bg-15-1093-2018, https://doi.org/10.5194/bg-15-1093-2018, 2018
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The Mekong River is among the largest on Earth and is vital for the economy of Vietnam and South East Asia and the livelihood of the local population (70 million across six countries). Numerous dams for hydropower are planned, which will affect the delivery of water and sediments to the Mekong delta, with numerous possible consequences. We report the dynamics of two greenhouse gases (CO2 and CH4) in the Mekong delta that can be used as a reference state to evaluate future changes.
Naomi Geeraert, Fred O. Omengo, Fredrick Tamooh, Trent R. Marwick, Alberto V. Borges, Gerard Govers, and Steven Bouillon
Biogeosciences Discuss., https://doi.org/10.5194/bg-2017-31, https://doi.org/10.5194/bg-2017-31, 2017
Manuscript not accepted for further review
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We observed that the relationship between the concentrations and the water discharge in the Tana River changed in wet seasons with and without flooding. Detailed sampling in those seasons is required in order to construct several rating curves and to obtain reliable flux estimates. The sediment and carbon fluxes in function of discharge will help us to asses the flux changes that can be expected when the hydrology changes due to climate change or human impact.
Thibault Lambert, Steven Bouillon, François Darchambeau, Philippe Massicotte, and Alberto V. Borges
Biogeosciences, 13, 5405–5420, https://doi.org/10.5194/bg-13-5405-2016, https://doi.org/10.5194/bg-13-5405-2016, 2016
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This paper aims to investigate the spatial variability in dissolved organic matter (DOM) in terms of both concentration and composition in the Congo River network. Stable carbon isotopes and absorption and fluorescent properties of DOM were used as proxies for DOM composition. This study shows that DOM degradation within the Congo Basin results in the transition from aromatic to aliphatic DOM as well as the role of landscape and water residence time on this transition.
Clare Woulds, Steven Bouillon, Gregory L. Cowie, Emily Drake, Jack J. Middelburg, and Ursula Witte
Biogeosciences, 13, 4343–4357, https://doi.org/10.5194/bg-13-4343-2016, https://doi.org/10.5194/bg-13-4343-2016, 2016
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Estuarine sediments are important locations for carbon cycling and burial. We used tracer experiments to investigate how site conditions affect the way in which seafloor biological communities cycle carbon. We showed that while total respiration rates are primarily determined by temperature, total carbon processing by the biological community is strongly related to
its biomass. Further, we saw a distinct pattern of carbon cycling in sandy sediment, in which uptake by bacteria dominates.
Fleur A. E. Roland, François Darchambeau, Cédric Morana, Sean A. Crowe, Bo Thamdrup, and Alberto V. Borges
Biogeosciences Discuss., https://doi.org/10.5194/bg-2016-300, https://doi.org/10.5194/bg-2016-300, 2016
Manuscript not accepted for further review
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We studied methane consumption in a tropical Great Lake (Lake Kivu, East Africa). Lake Kivu has huge methane concentrations in its deep anoxic waters, but is a very poor emitter of methane to the atmosphere, which suppose a strong methane consumption in the water column. During this study, we put in evidence high aerobic and anaerobic consumption rates, whose relative importance varied with the season (higher aerobic rates in dry season, when the oxic compartment is wider).
Thibault Lambert, Cristian R. Teodoru, Frank C. Nyoni, Steven Bouillon, François Darchambeau, Philippe Massicotte, and Alberto V. Borges
Biogeosciences, 13, 2727–2741, https://doi.org/10.5194/bg-13-2727-2016, https://doi.org/10.5194/bg-13-2727-2016, 2016
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This manuscript presents a detailed analysis of transport and transformation of dissolved organic matter along the Zambezi River and its largest tributary. A particular focus is put on the effects of floodplains/wetlands and reservoirs as well as low-flow vs. high-flow conditions on the longitudinal patterns in DOM concentration and composition. It is the first study to present such a detailed analysis for a whole, large river system, and in particular for a tropical river other than the Amazon.
N. Geeraert, F. O. Omengo, G. Govers, and S. Bouillon
Biogeosciences, 13, 517–525, https://doi.org/10.5194/bg-13-517-2016, https://doi.org/10.5194/bg-13-517-2016, 2016
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Rivers transport a large amount of carbon as dissolved organic carbon (DOC). Our incubation experiments on water of the Tana River, Kenya, showed that microbial decomposition of 10–60 % of the initial DOC occurred within the first 24–48 h. Simultaneously, there was a decrease in isotopic composition, indicating that DOC derived from C4 vegetation is preferentially decomposed. This has implications for the assessment of vegetation in a catchment based on isotope signatures of riverine carbon.
C. Morana, F. Darchambeau, F. A. E. Roland, A. V. Borges, F. Muvundja, Z. Kelemen, P. Masilya, J.-P. Descy, and S. Bouillon
Biogeosciences, 12, 4953–4963, https://doi.org/10.5194/bg-12-4953-2015, https://doi.org/10.5194/bg-12-4953-2015, 2015
C. R. Teodoru, F. C. Nyoni, A. V. Borges, F. Darchambeau, I. Nyambe, and S. Bouillon
Biogeosciences, 12, 2431–2453, https://doi.org/10.5194/bg-12-2431-2015, https://doi.org/10.5194/bg-12-2431-2015, 2015
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CO2 and CH4 concentrations and fluxes in the Zambezi River basin are well below the median/average values reported previously for tropical rivers, streams and reservoirs, and mainly controlled by the connectivity with floodplains and the presence of waterfalls and man-made reservoirs. The mass balance suggests that carbon transport to the ocean represents the major component (~60%) of the budget, while emissions to the atmosphere account for less than 40% of the total carbon yield.
C. Morana, A. V. Borges, F. A. E. Roland, F. Darchambeau, J.-P. Descy, and S. Bouillon
Biogeosciences, 12, 2077–2088, https://doi.org/10.5194/bg-12-2077-2015, https://doi.org/10.5194/bg-12-2077-2015, 2015
M. Hagens, C. P. Slomp, F. J. R. Meysman, D. Seitaj, J. Harlay, A. V. Borges, and J. J. Middelburg
Biogeosciences, 12, 1561–1583, https://doi.org/10.5194/bg-12-1561-2015, https://doi.org/10.5194/bg-12-1561-2015, 2015
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This study looks at the combined impacts of hypoxia and acidification, two major environmental stressors affecting coastal systems, in a seasonally stratified basin. Here, the surface water experiences less seasonality in pH than the bottom water despite higher process rates. This is due to a substantial reduction in the acid-base buffering capacity of the bottom water as it turns hypoxic in summer. This highlights the crucial role of the buffering capacity as a modulating factor in pH dynamics.
G. Abril, S. Bouillon, F. Darchambeau, C. R. Teodoru, T. R. Marwick, F. Tamooh, F. Ochieng Omengo, N. Geeraert, L. Deirmendjian, P. Polsenaere, and A. V. Borges
Biogeosciences, 12, 67–78, https://doi.org/10.5194/bg-12-67-2015, https://doi.org/10.5194/bg-12-67-2015, 2015
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We compared pCO2 data calculated from pH and alkalinity from those measured directly in a large array of temperate and tropical freshwaters. This revealed a large overestimation (up to 300%) of calculated pCO2 in the case of acidic and organic-rich waters, due to a contribution of organic acids anions to alkalinity and a lower buffering capacity of the carbonate system at acidic pH. Given the widespread distribution of acidic freshwaters, direct measurements of water pCO2 are encouraged.
P. Ciais, A. J. Dolman, A. Bombelli, R. Duren, A. Peregon, P. J. Rayner, C. Miller, N. Gobron, G. Kinderman, G. Marland, N. Gruber, F. Chevallier, R. J. Andres, G. Balsamo, L. Bopp, F.-M. Bréon, G. Broquet, R. Dargaville, T. J. Battin, A. Borges, H. Bovensmann, M. Buchwitz, J. Butler, J. G. Canadell, R. B. Cook, R. DeFries, R. Engelen, K. R. Gurney, C. Heinze, M. Heimann, A. Held, M. Henry, B. Law, S. Luyssaert, J. Miller, T. Moriyama, C. Moulin, R. B. Myneni, C. Nussli, M. Obersteiner, D. Ojima, Y. Pan, J.-D. Paris, S. L. Piao, B. Poulter, S. Plummer, S. Quegan, P. Raymond, M. Reichstein, L. Rivier, C. Sabine, D. Schimel, O. Tarasova, R. Valentini, R. Wang, G. van der Werf, D. Wickland, M. Williams, and C. Zehner
Biogeosciences, 11, 3547–3602, https://doi.org/10.5194/bg-11-3547-2014, https://doi.org/10.5194/bg-11-3547-2014, 2014
T. R. Marwick, F. Tamooh, B. Ogwoka, C. Teodoru, A. V. Borges, F. Darchambeau, and S. Bouillon
Biogeosciences, 11, 443–460, https://doi.org/10.5194/bg-11-443-2014, https://doi.org/10.5194/bg-11-443-2014, 2014
F. Tamooh, A. V. Borges, F. J. R. Meysman, K. Van Den Meersche, F. Dehairs, R. Merckx, and S. Bouillon
Biogeosciences, 10, 6911–6928, https://doi.org/10.5194/bg-10-6911-2013, https://doi.org/10.5194/bg-10-6911-2013, 2013
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Hella van Asperen, Thorsten Warneke, Alessandro Carioca de Araújo, Bruce Forsberg, Sávio José Filgueiras Ferreira, Thomas Röckmann, Carina van der Veen, Sipko Bulthuis, Leonardo Ramos de Oliveira, Thiago de Lima Xavier, Jailson da Mata, Marta de Oliveira Sá, Paulo Ricardo Teixeira, Julie Andrews de França e Silva, Susan Trumbore, and Justus Notholt
Biogeosciences, 21, 3183–3199, https://doi.org/10.5194/bg-21-3183-2024, https://doi.org/10.5194/bg-21-3183-2024, 2024
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Carbon monoxide (CO) is regarded as an important indirect greenhouse gas. Soils can emit and take up CO, but, until now, uncertainty remains as to which process dominates in tropical rainforests. We present the first soil CO flux measurements from a tropical rainforest. Based on our observations, we report that tropical rainforest soils are a net source of CO. In addition, we show that valley streams and inundated areas are likely additional hot spots of CO in the ecosystem.
Yélognissè Agbohessou, Claire Delon, Manuela Grippa, Eric Mougin, Daouda Ngom, Espoir Koudjo Gaglo, Ousmane Ndiaye, Paulo Salgado, and Olivier Roupsard
Biogeosciences, 21, 2811–2837, https://doi.org/10.5194/bg-21-2811-2024, https://doi.org/10.5194/bg-21-2811-2024, 2024
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Emissions of greenhouse gases in the Sahel are not well represented because they are considered weak compared to the rest of the world. However, natural areas in the Sahel emit carbon dioxide and nitrous oxides, which need to be assessed because of extended surfaces. We propose an assessment of such emissions in Sahelian silvopastoral systems and of how they are influenced by environmental characteristics. These results are essential to inform climate change strategies in the region.
Merit van den Berg, Thomas M. Gremmen, Renske J. E. Vroom, Jacobus van Huissteden, Jim Boonman, Corine J. A. van Huissteden, Ype van der Velde, Alfons J. P. Smolders, and Bas P. van de Riet
Biogeosciences, 21, 2669–2690, https://doi.org/10.5194/bg-21-2669-2024, https://doi.org/10.5194/bg-21-2669-2024, 2024
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Drained peatlands emit 3 % of the global greenhouse gas emissions. Paludiculture is a way to reduce CO2 emissions while at the same time generating an income for landowners. The side effect is the potentially high methane emissions. We found very high methane emissions for broadleaf cattail compared with narrowleaf cattail and water fern. The rewetting was, however, effective to stop CO2 emissions for all species. The highest potential to reduce greenhouse gas emissions had narrowleaf cattail.
Thea H. Heimdal, Galen A. McKinley, Adrienne J. Sutton, Amanda R. Fay, and Lucas Gloege
Biogeosciences, 21, 2159–2176, https://doi.org/10.5194/bg-21-2159-2024, https://doi.org/10.5194/bg-21-2159-2024, 2024
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Measurements of ocean carbon are limited in time and space. Machine learning algorithms are therefore used to reconstruct ocean carbon where observations do not exist. Improving these reconstructions is important in order to accurately estimate how much carbon the ocean absorbs from the atmosphere. In this study, we find that a small addition of observations from the Southern Ocean, obtained by autonomous sampling platforms, could significantly improve the reconstructions.
Guilherme L. Torres Mendonça, Julia Pongratz, and Christian H. Reick
Biogeosciences, 21, 1923–1960, https://doi.org/10.5194/bg-21-1923-2024, https://doi.org/10.5194/bg-21-1923-2024, 2024
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We study the timescale dependence of airborne fraction and underlying feedbacks by a theory of the climate–carbon system. Using simulations we show the predictive power of this theory and find that (1) this fraction generally decreases for increasing timescales and (2) at all timescales the total feedback is negative and the model spread in a single feedback causes the spread in the airborne fraction. Our study indicates that those are properties of the system, independently of the scenario.
François Clayer, Jan Erik Thrane, Kuria Ndungu, Andrew King, Peter Dörsch, and Thomas Rohrlack
Biogeosciences, 21, 1903–1921, https://doi.org/10.5194/bg-21-1903-2024, https://doi.org/10.5194/bg-21-1903-2024, 2024
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Determination of dissolved greenhouse gas (GHG) in freshwater allows us to estimate GHG fluxes. Mercuric chloride (HgCl2) is used to preserve water samples prior to GHG analysis despite its environmental and health impacts and interferences with water chemistry in freshwater. Here, we tested the effects of HgCl2, two substitutes and storage time on GHG in water from two boreal lakes. Preservation with HgCl2 caused overestimation of CO2 concentration with consequences for GHG flux estimation.
Helena Rautakoski, Mika Korkiakoski, Jarmo Mäkelä, Markku Koskinen, Kari Minkkinen, Mika Aurela, Paavo Ojanen, and Annalea Lohila
Biogeosciences, 21, 1867–1886, https://doi.org/10.5194/bg-21-1867-2024, https://doi.org/10.5194/bg-21-1867-2024, 2024
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Current and future nitrous oxide (N2O) emissions are difficult to estimate due to their high variability in space and time. Several years of N2O fluxes from drained boreal peatland forest indicate high importance of summer precipitation, winter temperature, and snow conditions in controlling annual N2O emissions. The results indicate increasing year-to-year variation in N2O emissions in changing climate with more extreme seasonal weather conditions.
Matthias Koschorreck, Norbert Kamjunke, Uta Koedel, Michael Rode, Claudia Schuetze, and Ingeborg Bussmann
Biogeosciences, 21, 1613–1628, https://doi.org/10.5194/bg-21-1613-2024, https://doi.org/10.5194/bg-21-1613-2024, 2024
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We measured the emission of carbon dioxide (CO2) and methane (CH4) from different sites at the river Elbe in Germany over 3 days to find out what is more important for quantification: small-scale spatial variability or diurnal temporal variability. We found that CO2 emissions were very different between day and night, while CH4 emissions were more different between sites. Dried out river sediments contributed to CO2 emissions, while the side areas of the river were important CH4 sources.
Odysseas Sifounakis, Edwin Haas, Klaus Butterbach-Bahl, and Maria P. Papadopoulou
Biogeosciences, 21, 1563–1581, https://doi.org/10.5194/bg-21-1563-2024, https://doi.org/10.5194/bg-21-1563-2024, 2024
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We performed a full assessment of the carbon and nitrogen cycles of a cropland ecosystem. An uncertainty analysis and quantification of all carbon and nitrogen fluxes were deployed. The inventory simulations include greenhouse gas emissions of N2O, NH3 volatilization and NO3 leaching from arable land cultivation in Greece. The inventory also reports changes in soil organic carbon and nitrogen stocks in arable soils.
Sarah M. Ludwig, Luke Schiferl, Jacqueline Hung, Susan M. Natali, and Roisin Commane
Biogeosciences, 21, 1301–1321, https://doi.org/10.5194/bg-21-1301-2024, https://doi.org/10.5194/bg-21-1301-2024, 2024
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Landscapes are often assumed to be homogeneous when using eddy covariance fluxes, which can lead to biases when calculating carbon budgets. In this study we report eddy covariance carbon fluxes from heterogeneous tundra. We used the footprints of each flux observation to unmix the fluxes coming from components of the landscape. We identified and quantified hot spots of carbon emissions in the landscape. Accurately scaling with landscape heterogeneity yielded half as much regional carbon uptake.
Justine Trémeau, Beñat Olascoaga, Leif Backman, Esko Karvinen, Henriikka Vekuri, and Liisa Kulmala
Biogeosciences, 21, 949–972, https://doi.org/10.5194/bg-21-949-2024, https://doi.org/10.5194/bg-21-949-2024, 2024
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We studied urban lawns and meadows in the Helsinki metropolitan area, Finland. We found that meadows are more resistant to drought events but that they do not increase carbon sequestration compared with lawns. Moreover, the transformation from lawns to meadows did not demonstrate any negative climate effects in terms of greenhouse gas emissions. Even though social and economic aspects also steer urban development, these results can guide planning to consider carbon-smart options.
Ralf C. H. Aben, Daniel van de Craats, Jim Boonman, Stijn H. Peeters, Bart Vriend, Coline C. F. Boonman, Ype van der Velde, Gilles Erkens, and Merit van den Berg
EGUsphere, https://doi.org/10.5194/egusphere-2024-403, https://doi.org/10.5194/egusphere-2024-403, 2024
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Drained peatlands cause high CO2 emissions. Raising the groundwater table can lower emissions. We used automated flux chamber measurements on 12 sites for up to 4 years and found a linear association between annual water table depth and CO2 emission. We also found that the average amount of carbon above the water table better predicted annual CO2 emission than water table depth and that water infiltration systems—used to effectively raise the water table—can be used to mitigate CO2 emissions.
Guantao Chen, Edzo Veldkamp, Muhammad Damris, Bambang Irawan, Aiyen Tjoa, and Marife D. Corre
Biogeosciences, 21, 513–529, https://doi.org/10.5194/bg-21-513-2024, https://doi.org/10.5194/bg-21-513-2024, 2024
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We established an oil palm management experiment in a large-scale oil palm plantation in Jambi, Indonesia. We recorded oil palm fruit yield and measured soil CO2, N2O, and CH4 fluxes. After 4 years of treatment, compared with conventional fertilization with herbicide weeding, reduced fertilization with mechanical weeding did not reduce yield and soil greenhouse gas emissions, which highlights the legacy effects of over a decade of conventional management prior to the start of the experiment.
Ingeborg Bussmann, Eric P. Achterberg, Holger Brix, Nicolas Brüggemann, Götz Flöser, Claudia Schütze, and Philipp Fischer
EGUsphere, https://doi.org/10.5194/egusphere-2023-3018, https://doi.org/10.5194/egusphere-2023-3018, 2024
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Methane (CH4) is an important greenhouse gas and contributes to climate warming. The input of CH4 from coastal areas to the atmosphere however is not well defined. Dissolved and atmospheric CH4 was determined at high spatial resolution in or above the North Sea. The atmospheric CH4 concentration was mainly influenced by wind direction. With our detailed study on the spatial distribution of CH4 fluxes we were able to provide a detailed and more realistic estimation of coastal CH4 fluxes.
Elizabeth Gachibu Wangari, Ricky Mwangada Mwanake, Tobias Houska, David Kraus, Gretchen Maria Gettel, Ralf Kiese, Lutz Breuer, and Klaus Butterbach-Bahl
Biogeosciences, 20, 5029–5067, https://doi.org/10.5194/bg-20-5029-2023, https://doi.org/10.5194/bg-20-5029-2023, 2023
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Agricultural landscapes act as sinks or sources of the greenhouse gases (GHGs) CO2, CH4, or N2O. Various physicochemical and biological processes control the fluxes of these GHGs between ecosystems and the atmosphere. Therefore, fluxes depend on environmental conditions such as soil moisture, soil temperature, or soil parameters, which result in large spatial and temporal variations of GHG fluxes. Here, we describe an example of how this variation may be studied and analyzed.
Niu Zhu, Jinniu Wang, Dongliang Luo, Xufeng Wang, Cheng Shen, and Ning Wu
EGUsphere, https://doi.org/10.5194/egusphere-2023-2669, https://doi.org/10.5194/egusphere-2023-2669, 2023
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Our study delves into the vital role of subalpine forest in the Qinghai-Tibet Plateau as carbon sinks in the context of climate change. Utilizing advanced eddy covariance systems, we uncover their significant carbon sequestration potential, observing distinct seasonal patterns influenced by temperature, humidity, and radiation. Notably, these forest exhibit robust carbon absorption, with potential implications for global carbon balance.
Colette L. Kelly, Nicole M. Travis, Pascale A. Baya, Claudia Frey, Xin Sun, Bess B. Ward, and Karen L. Casciotti
EGUsphere, https://doi.org/10.5194/egusphere-2023-2642, https://doi.org/10.5194/egusphere-2023-2642, 2023
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We investigated the origins of nitrous oxide, a potent greenhouse gas, in low oxygen ocean regions. Our findings shed light on the microbial processes behind nitrous oxide production, including “hybrid” nitrous oxide generation by ammonia-oxidizing archaea, one of the most abundant organisms in the ocean. We also observed a strong link between nitrous oxide production and oxygen levels. These results set up potential feedbacks between oxygen depletion and greenhouse gas cycling in the oceans.
Laurie C. Menviel, Paul Spence, Andrew E. Kiss, Matthew A. Chamberlain, Hakase Hayashida, Matthew H. England, and Darryn Waugh
Biogeosciences, 20, 4413–4431, https://doi.org/10.5194/bg-20-4413-2023, https://doi.org/10.5194/bg-20-4413-2023, 2023
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As the ocean absorbs 25% of the anthropogenic emissions of carbon, it is important to understand the impact of climate change on the flux of carbon between the ocean and the atmosphere. Here, we use a very high-resolution ocean, sea-ice, carbon cycle model to show that the capability of the Southern Ocean to uptake CO2 has decreased over the last 40 years due to a strengthening and poleward shift of the southern hemispheric westerlies. This trend is expected to continue over the coming century.
Petr Znachor, Jiří Nedoma, Vojtech Kolar, and Anna Matoušů
Biogeosciences, 20, 4273–4288, https://doi.org/10.5194/bg-20-4273-2023, https://doi.org/10.5194/bg-20-4273-2023, 2023
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We conducted intensive spatial sampling of the hypertrophic fishpond to better understand the spatial dynamics of methane fluxes and environmental heterogeneity in fishponds. The diffusive fluxes of methane accounted for only a minor fraction of the total fluxes and both varied pronouncedly within the pond and over the studied summer season. This could be explained only by the water depth. Wind substantially affected temperature, oxygen and chlorophyll a distribution in the pond.
Sofie Sjögersten, Martha Ledger, Matthias Siewert, Betsabé de la Barreda-Bautista, Andrew Sowter, David Gee, Giles Foody, and Doreen S. Boyd
Biogeosciences, 20, 4221–4239, https://doi.org/10.5194/bg-20-4221-2023, https://doi.org/10.5194/bg-20-4221-2023, 2023
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Permafrost thaw in Arctic regions is increasing methane emissions, but quantification is difficult given the large and remote areas impacted. We show that UAV data together with satellite data can be used to extrapolate emissions across the wider landscape as well as detect areas at risk of higher emissions. A transition of currently degrading areas to fen type vegetation can increase emission by several orders of magnitude, highlighting the importance of quantifying areas at risk.
Cole G. Brachmann, Tage Vowles, Riikka Rinnan, Mats P. Björkman, Anna Ekberg, and Robert G. Björk
Biogeosciences, 20, 4069–4086, https://doi.org/10.5194/bg-20-4069-2023, https://doi.org/10.5194/bg-20-4069-2023, 2023
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Herbivores change plant communities through grazing, altering the amount of CO2 and plant-specific chemicals (termed VOCs) emitted. We tested this effect by excluding herbivores and studying the CO2 and VOC emissions. Herbivores reduced CO2 emissions from a meadow community and altered VOC composition; however, community type had the strongest effect on the amount of CO2 and VOCs released. Herbivores can mediate greenhouse gas emissions, but the effect is marginal and community dependent.
Ole Lessmann, Jorge Encinas Fernández, Karla Martínez-Cruz, and Frank Peeters
Biogeosciences, 20, 4057–4068, https://doi.org/10.5194/bg-20-4057-2023, https://doi.org/10.5194/bg-20-4057-2023, 2023
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Based on a large dataset of seasonally resolved methane (CH4) pore water concentrations in a reservoir's sediment, we assess the significance of CH4 emissions due to reservoir flushing. In the studied reservoir, CH4 emissions caused by one flushing operation can represent 7 %–14 % of the annual CH4 emissions and depend on the timing of the flushing operation. In reservoirs with high sediment loadings, regular flushing may substantially contribute to the overall CH4 emissions.
Matti Räsänen, Risto Vesala, Petri Rönnholm, Laura Arppe, Petra Manninen, Markus Jylhä, Jouko Rikkinen, Petri Pellikka, and Janne Rinne
Biogeosciences, 20, 4029–4042, https://doi.org/10.5194/bg-20-4029-2023, https://doi.org/10.5194/bg-20-4029-2023, 2023
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Fungus-growing termites recycle large parts of dead plant material in African savannas and are significant sources of greenhouse gases. We measured CO2 and CH4 fluxes from their mounds and surrounding soils in open and closed habitats. The fluxes scale with mound volume. The results show that emissions from mounds of fungus-growing termites are more stable than those from other termites. The soil fluxes around the mound are affected by the termite colonies at up to 2 m distance from the mound.
Tim René de Groot, Anne Margriet Mol, Katherine Mesdag, Pierre Ramond, Rachel Ndhlovu, Julia Catherine Engelmann, Thomas Röckmann, and Helge Niemann
Biogeosciences, 20, 3857–3872, https://doi.org/10.5194/bg-20-3857-2023, https://doi.org/10.5194/bg-20-3857-2023, 2023
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This study investigates methane dynamics in the Wadden Sea. Our measurements revealed distinct variations triggered by seasonality and tidal forcing. The methane budget was higher in warmer seasons but surprisingly high in colder seasons. Methane dynamics were amplified during low tides, flushing the majority of methane into the North Sea or releasing it to the atmosphere. Methanotrophic activity was also elevated during low tide but mitigated only a small fraction of the methane efflux.
Frederic Thalasso, Brenda Riquelme, Andrés Gómez, Roy Mackenzie, Francisco Javier Aguirre, Jorge Hoyos-Santillan, Ricardo Rozzi, and Armando Sepulveda-Jauregui
Biogeosciences, 20, 3737–3749, https://doi.org/10.5194/bg-20-3737-2023, https://doi.org/10.5194/bg-20-3737-2023, 2023
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A robust skirt-chamber design to capture and quantify greenhouse gas emissions from peatlands is presented. Compared to standard methods, this design improves the spatial resolution of field studies in remote locations while minimizing intrusion.
Gesa Schulz, Tina Sanders, Yoana G. Voynova, Hermann W. Bange, and Kirstin Dähnke
Biogeosciences, 20, 3229–3247, https://doi.org/10.5194/bg-20-3229-2023, https://doi.org/10.5194/bg-20-3229-2023, 2023
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Nitrous oxide (N2O) is an important greenhouse gas. However, N2O emissions from estuaries underlie significant uncertainties due to limited data availability and high spatiotemporal variability. We found the Elbe Estuary (Germany) to be a year-round source of N2O, with the highest emissions in winter along with high nitrogen loads. However, in spring and summer, N2O emissions did not decrease alongside lower nitrogen loads because organic matter fueled in situ N2O production along the estuary.
Alex Mavrovic, Oliver Sonnentag, Juha Lemmetyinen, Jennifer L. Baltzer, Christophe Kinnard, and Alexandre Roy
Biogeosciences, 20, 2941–2970, https://doi.org/10.5194/bg-20-2941-2023, https://doi.org/10.5194/bg-20-2941-2023, 2023
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This review supports the integration of microwave spaceborne information into carbon cycle science for Arctic–boreal regions. The microwave data record spans multiple decades with frequent global observations of soil moisture and temperature, surface freeze–thaw cycles, vegetation water storage, snowpack properties, and land cover. This record holds substantial unexploited potential to better understand carbon cycle processes.
Zoé Rehder, Thomas Kleinen, Lars Kutzbach, Victor Stepanenko, Moritz Langer, and Victor Brovkin
Biogeosciences, 20, 2837–2855, https://doi.org/10.5194/bg-20-2837-2023, https://doi.org/10.5194/bg-20-2837-2023, 2023
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We use a new model to investigate how methane emissions from Arctic ponds change with warming. We find that emissions increase substantially. Under annual temperatures 5 °C above present temperatures, pond methane emissions are more than 3 times higher than now. Most of this increase is caused by an increase in plant productivity as plants provide the substrate microbes used to produce methane. We conclude that vegetation changes need to be included in predictions of pond methane emissions.
Julian Koch, Lars Elsgaard, Mogens H. Greve, Steen Gyldenkærne, Cecilie Hermansen, Gregor Levin, Shubiao Wu, and Simon Stisen
Biogeosciences, 20, 2387–2403, https://doi.org/10.5194/bg-20-2387-2023, https://doi.org/10.5194/bg-20-2387-2023, 2023
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Utilizing peatlands for agriculture leads to large emissions of greenhouse gases worldwide. The emissions are triggered by lowering the water table, which is a necessary step in order to make peatlands arable. Many countries aim at reducing their emissions by restoring peatlands, which can be achieved by stopping agricultural activities and thereby raising the water table. We estimate a total emission of 2.6 Mt CO2-eq for organic-rich peatlands in Denmark and a potential reduction of 77 %.
Mélissa Laurent, Matthias Fuchs, Tanja Herbst, Alexandra Runge, Susanne Liebner, and Claire C. Treat
Biogeosciences, 20, 2049–2064, https://doi.org/10.5194/bg-20-2049-2023, https://doi.org/10.5194/bg-20-2049-2023, 2023
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In this study we investigated the effect of different parameters (temperature, landscape position) on the production of greenhouse gases during a 1-year permafrost thaw experiment. For very similar carbon and nitrogen contents, our results show a strong heterogeneity in CH4 production, as well as in microbial abundance. According to our study, these differences are mainly due to the landscape position and the hydrological conditions established as a result of the topography.
Michael Moubarak, Seeta Sistla, Stefano Potter, Susan M. Natali, and Brendan M. Rogers
Biogeosciences, 20, 1537–1557, https://doi.org/10.5194/bg-20-1537-2023, https://doi.org/10.5194/bg-20-1537-2023, 2023
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Tundra wildfires are increasing in frequency and severity with climate change. We show using a combination of field measurements and computational modeling that tundra wildfires result in a positive feedback to climate change by emitting significant amounts of long-lived greenhouse gasses. With these effects, attention to tundra fires is necessary for mitigating climate change.
Hanna I. Campen, Damian L. Arévalo-Martínez, and Hermann W. Bange
Biogeosciences, 20, 1371–1379, https://doi.org/10.5194/bg-20-1371-2023, https://doi.org/10.5194/bg-20-1371-2023, 2023
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Carbon monoxide (CO) is a climate-relevant trace gas emitted from the ocean. However, oceanic CO cycling is understudied. Results from incubation experiments conducted in the Fram Strait (Arctic Ocean) indicated that (i) pH did not affect CO cycling and (ii) enhanced CO production and consumption were positively correlated with coloured dissolved organic matter and nitrate concentrations. This suggests microbial CO uptake to be the driving factor for CO cycling in the Arctic Ocean.
Yihong Zhu, Ruihua Liu, Huai Zhang, Shaoda Liu, Zhengfeng Zhang, Fei-Hai Yu, and Timothy G. Gregoire
Biogeosciences, 20, 1357–1370, https://doi.org/10.5194/bg-20-1357-2023, https://doi.org/10.5194/bg-20-1357-2023, 2023
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With global warming, the risk of flooding is rising, but the response of the carbon cycle of aquatic and associated riparian systems
to flooding is still unclear. Based on the data collected in the Lijiang, we found that flooding would lead to significant carbon emissions of fluvial areas and riparian areas during flooding, but carbon capture may happen after flooding. In the riparian areas, the surviving vegetation, especially clonal plants, played a vital role in this transformation.
Lauri Heiskanen, Juha-Pekka Tuovinen, Henriikka Vekuri, Aleksi Räsänen, Tarmo Virtanen, Sari Juutinen, Annalea Lohila, Juha Mikola, and Mika Aurela
Biogeosciences, 20, 545–572, https://doi.org/10.5194/bg-20-545-2023, https://doi.org/10.5194/bg-20-545-2023, 2023
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We measured and modelled the CO2 and CH4 fluxes of the terrestrial and aquatic ecosystems of the subarctic landscape for 2 years. The landscape was an annual CO2 sink and a CH4 source. The forest had the largest contribution to the landscape-level CO2 sink and the peatland to the CH4 emissions. The lakes released 24 % of the annual net C uptake of the landscape back to the atmosphere. The C fluxes were affected most by the rainy peak growing season of 2017 and the drought event in July 2018.
Artem G. Lim, Ivan V. Krickov, Sergey N. Vorobyev, Mikhail A. Korets, Sergey Kopysov, Liudmila S. Shirokova, Jan Karlsson, and Oleg S. Pokrovsky
Biogeosciences, 19, 5859–5877, https://doi.org/10.5194/bg-19-5859-2022, https://doi.org/10.5194/bg-19-5859-2022, 2022
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In order to quantify C transport and emission and main environmental factors controlling the C cycle in Siberian rivers, we investigated the largest tributary of the Ob River, the Ket River basin, by measuring spatial and seasonal variations in carbon CO2 and CH4 concentrations and emissions together with hydrochemical analyses. The obtained results are useful for large-scale modeling of C emission and export fluxes from permafrost-free boreal rivers of an underrepresented region of the world.
Robert J. Parker, Chris Wilson, Edward Comyn-Platt, Garry Hayman, Toby R. Marthews, A. Anthony Bloom, Mark F. Lunt, Nicola Gedney, Simon J. Dadson, Joe McNorton, Neil Humpage, Hartmut Boesch, Martyn P. Chipperfield, Paul I. Palmer, and Dai Yamazaki
Biogeosciences, 19, 5779–5805, https://doi.org/10.5194/bg-19-5779-2022, https://doi.org/10.5194/bg-19-5779-2022, 2022
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Wetlands are the largest natural source of methane, one of the most important climate gases. The JULES land surface model simulates these emissions. We use satellite data to evaluate how well JULES reproduces the methane seasonal cycle over different tropical wetlands. It performs well for most regions; however, it struggles for some African wetlands influenced heavily by river flooding. We explain the reasons for these deficiencies and highlight how future development will improve these areas.
Saúl Edgardo Martínez Castellón, José Henrique Cattanio, José Francisco Berrêdo, Marcelo Rollnic, Maria de Lourdes Ruivo, and Carlos Noriega
Biogeosciences, 19, 5483–5497, https://doi.org/10.5194/bg-19-5483-2022, https://doi.org/10.5194/bg-19-5483-2022, 2022
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We seek to understand the influence of climatic seasonality and microtopography on CO2 and CH4 fluxes in an Amazonian mangrove. Topography and seasonality had a contrasting influence when comparing the two gas fluxes: CO2 fluxes were greater in high topography in the dry period, and CH4 fluxes were greater in the rainy season in low topography. Only CO2 fluxes were correlated with soil organic matter, the proportion of carbon and nitrogen, and redox potential.
Matthias Koschorreck, Klaus Holger Knorr, and Lelaina Teichert
Biogeosciences, 19, 5221–5236, https://doi.org/10.5194/bg-19-5221-2022, https://doi.org/10.5194/bg-19-5221-2022, 2022
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At low water levels, parts of the bottom of rivers fall dry. These beaches or mudflats emit the greenhouse gas carbon dioxide (CO2) to the atmosphere. We found that those emissions are caused by microbial reactions in the sediment and that they change with time. Emissions were influenced by many factors like temperature, water level, rain, plants, and light.
Wantong Zhang, Zhengyi Hu, Joachim Audet, Thomas A. Davidson, Enze Kang, Xiaoming Kang, Yong Li, Xiaodong Zhang, and Jinzhi Wang
Biogeosciences, 19, 5187–5197, https://doi.org/10.5194/bg-19-5187-2022, https://doi.org/10.5194/bg-19-5187-2022, 2022
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This work focused on the CH4 and N2O emissions from alpine peatlands in response to the interactive effects of altered water table levels and increased nitrogen deposition. Across the 2-year mesocosm experiment, nitrogen deposition showed nonlinear effects on CH4 emissions and linear effects on N2O emissions, and these N effects were associated with the water table levels. Our results imply the future scenario of strengthened CH4 and N2O emissions from an alpine peatland.
Karel Castro-Morales, Anna Canning, Sophie Arzberger, Will A. Overholt, Kirsten Küsel, Olaf Kolle, Mathias Göckede, Nikita Zimov, and Arne Körtzinger
Biogeosciences, 19, 5059–5077, https://doi.org/10.5194/bg-19-5059-2022, https://doi.org/10.5194/bg-19-5059-2022, 2022
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Permafrost thaw releases methane that can be emitted into the atmosphere or transported by Arctic rivers. Methane measurements are lacking in large Arctic river regions. In the Kolyma River (northeast Siberia), we measured dissolved methane to map its distribution with great spatial detail. The river’s edge and river junctions had the highest methane concentrations compared to other river areas. Microbial communities in the river showed that the river’s methane likely is from the adjacent land.
Sonja Gindorf, Hermann W. Bange, Dennis Booge, and Annette Kock
Biogeosciences, 19, 4993–5006, https://doi.org/10.5194/bg-19-4993-2022, https://doi.org/10.5194/bg-19-4993-2022, 2022
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Methane is a climate-relevant greenhouse gas which is emitted to the atmosphere from coastal areas such as the Baltic Sea. We measured the methane concentration in the water column of the western Kiel Bight. Methane concentrations were higher in September than in June. We found no relationship between the 2018 European heatwave and methane concentrations. Our results show that the methane distribution in the water column is strongly affected by temporal and spatial variabilities.
Margaret Capooci and Rodrigo Vargas
Biogeosciences, 19, 4655–4670, https://doi.org/10.5194/bg-19-4655-2022, https://doi.org/10.5194/bg-19-4655-2022, 2022
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Tidal salt marsh soil emits greenhouse gases, as well as sulfur-based gases, which play roles in global climate but are not well studied as they are difficult to measure. Traditional methods of measuring these gases worked relatively well for carbon dioxide, but less so for methane, nitrous oxide, carbon disulfide, and dimethylsulfide. High variability of trace gases complicates the ability to accurately calculate gas budgets and new approaches are needed for monitoring protocols.
Janne Rinne, Patryk Łakomiec, Patrik Vestin, Joel D. White, Per Weslien, Julia Kelly, Natascha Kljun, Lena Ström, and Leif Klemedtsson
Biogeosciences, 19, 4331–4349, https://doi.org/10.5194/bg-19-4331-2022, https://doi.org/10.5194/bg-19-4331-2022, 2022
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The study uses the stable isotope 13C of carbon in methane to investigate the origins of spatial and temporal variation in methane emitted by a temperate wetland ecosystem. The results indicate that methane production is more important for spatial variation than methane consumption by micro-organisms. Temporal variation on a seasonal timescale is most likely affected by more than one driver simultaneously.
Kukka-Maaria Kohonen, Roderick Dewar, Gianluca Tramontana, Aleksanteri Mauranen, Pasi Kolari, Linda M. J. Kooijmans, Dario Papale, Timo Vesala, and Ivan Mammarella
Biogeosciences, 19, 4067–4088, https://doi.org/10.5194/bg-19-4067-2022, https://doi.org/10.5194/bg-19-4067-2022, 2022
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Four different methods for quantifying photosynthesis (GPP) at ecosystem scale were tested, of which two are based on carbon dioxide (CO2) and two on carbonyl sulfide (COS) flux measurements. CO2-based methods are traditional partitioning, and a new method uses machine learning. We introduce a novel method for calculating GPP from COS fluxes, with potentially better applicability than the former methods. Both COS-based methods gave on average higher GPP estimates than the CO2-based estimates.
Lutz Beckebanze, Benjamin R. K. Runkle, Josefine Walz, Christian Wille, David Holl, Manuel Helbig, Julia Boike, Torsten Sachs, and Lars Kutzbach
Biogeosciences, 19, 3863–3876, https://doi.org/10.5194/bg-19-3863-2022, https://doi.org/10.5194/bg-19-3863-2022, 2022
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In this study, we present observations of lateral and vertical carbon fluxes from a permafrost-affected study site in the Russian Arctic. From this dataset we estimate the net ecosystem carbon balance for this study site. We show that lateral carbon export has a low impact on the net ecosystem carbon balance during the complete study period (3 months). Nevertheless, our results also show that lateral carbon export can exceed vertical carbon uptake at the beginning of the growing season.
Shahar Baram, Asher Bar-Tal, Alon Gal, Shmulik P. Friedman, and David Russo
Biogeosciences, 19, 3699–3711, https://doi.org/10.5194/bg-19-3699-2022, https://doi.org/10.5194/bg-19-3699-2022, 2022
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Static chambers are the most common tool used to measure greenhouse gas (GHG) fluxes. We tested the impact of such chambers on nitrous oxide emissions in drip irrigation. Field measurements and 3-D simulations show that the chamber base drastically affects the water and nutrient distribution in the soil and hence the measured GHG fluxes. A nomogram is suggested to determine the optimal diameter of a cylindrical chamber that ensures minimal disturbance.
Tracy E. Rankin, Nigel T. Roulet, and Tim R. Moore
Biogeosciences, 19, 3285–3303, https://doi.org/10.5194/bg-19-3285-2022, https://doi.org/10.5194/bg-19-3285-2022, 2022
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Peatland respiration is made up of plant and peat sources. How to separate these sources is not well known as peat respiration is not straightforward and is more influenced by vegetation dynamics than previously thought. Results of plot level measurements from shrubs and sparse grasses in a woody bog show that plants' respiration response to changes in climate is related to their different root structures, implying a difference in the mechanisms by which they obtain water resources.
Alison Bressler and Jennifer Blesh
Biogeosciences, 19, 3169–3184, https://doi.org/10.5194/bg-19-3169-2022, https://doi.org/10.5194/bg-19-3169-2022, 2022
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Our field experiment tested if a mixture of a nitrogen-fixing legume and non-legume cover crop could reduce nitrous oxide (N2O) emissions following tillage, compared to the legume grown alone. We found higher N2O following both legume treatments, compared to those without, and lower emissions from the cover crop mixture at one of the two test sites, suggesting that interactions between cover crop types and soil quality influence N2O emissions.
Sari Juutinen, Mika Aurela, Juha-Pekka Tuovinen, Viktor Ivakhov, Maiju Linkosalmi, Aleksi Räsänen, Tarmo Virtanen, Juha Mikola, Johanna Nyman, Emmi Vähä, Marina Loskutova, Alexander Makshtas, and Tuomas Laurila
Biogeosciences, 19, 3151–3167, https://doi.org/10.5194/bg-19-3151-2022, https://doi.org/10.5194/bg-19-3151-2022, 2022
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We measured CO2 and CH4 fluxes in heterogenous Arctic tundra in eastern Siberia. We found that tundra wetlands with sedge and grass vegetation contributed disproportionately to the landscape's ecosystem CO2 uptake and CH4 emissions to the atmosphere. Moreover, we observed high CH4 consumption in dry tundra, particularly in barren areas, offsetting part of the CH4 emissions from the wetlands.
Jessica Plein, Rulon W. Clark, Kyle A. Arndt, Walter C. Oechel, Douglas Stow, and Donatella Zona
Biogeosciences, 19, 2779–2794, https://doi.org/10.5194/bg-19-2779-2022, https://doi.org/10.5194/bg-19-2779-2022, 2022
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Tundra vegetation and the carbon balance of Arctic ecosystems can be substantially impacted by herbivory. We tested how herbivory by brown lemmings in individual enclosure plots have impacted carbon exchange of tundra ecosystems via altering carbon dioxide (CO2) and methane (CH4) fluxes. Lemmings significantly decreased net CO2 uptake while not affecting CH4 emissions. There was no significant difference in the subsequent growing season due to recovery of the vegetation.
Cited articles
Bastviken, D., Ejlertsson, J., Sundh, I., and Tranvik, L.: Methane as a
source of carbon and energy for lake pelagic food webs, Ecology, 84,
969–981, 2003.
Bastviken, D., Tranvik, L. J., Downing, J. A., Crill, P. M., and
Enrich-Prast, A.: Freshwater methane emissions offset the continental carbon
sink, Science, 331, 50–50, 2011.
Baines, S. B. and Pace, M. L: The production of dissolved organic matter
by phytoplankton and its importance to bacteria: patterns across marine and
freshwater systems, Limnol. Oceanogr., 36, 1078–1090, https://doi.org/10.4319/lo.1991.36.6.1078, 1991.
Bishop, N. I.: The influence of the herbicide, DCMU, on the oxygen-evolving
system of photosynthesis, Biochim. Biophys. Acta, 27, 205–206,
https://doi.org/10.1016/0006-3002(58)90313-5, 1958.
Bižić, M., Ionescu, D., Günthel, M., Tang, K. W., and Grossart,
H. P.: Oxic Methane Cycling: New Evidence for Methane Formation in Oxic Lake
Water, Biogenesis of Hydrocarbons, 1, 1–22, 2018.
Bižić, M., Klintzsch, T., Ionescu, D., Hindiyeh, M. Y., Günthel,
M., Muro-Pastor, A. M., Eckert, W., Urich, T., and Grossart, H. P.: Aquatic
and terrestrial cyanobacteria produce methane, Sci. Adv., 6,
eaax5343, https://doi.org/10.1126/sciadv.aax5343, 2020.
Bogard, M. J., Del Giorgio, P. A., Boutet, L., Chaves, M. C. G., Prairie, Y.
T., Merante, A., and Derry, A. M.: Oxic water column methanogenesis as a
major component of aquatic CH4 fluxes, Nat. Commun., 5, 5350, https://doi.org/10.1038/ncomms6350, 2014.
Borges, A. V., Darchambeau, F., Teodoru, C. R., Marwick, T. R., Tamooh, F.,
Geeraert, N., Morana, C., Okuku, E., and Bouillon, S.: Globally significant
greenhouse-gas emissions from African inland waters, Nat. Geosci.,
8, 637–642, 2015.
Bruhn, D., Møller, I. M., Mikkelsen, T. N., and Ambus, P.: Terrestrial
plant methane production and emission, Physiol. Plantarum, 144,
201–209, https://doi.org/10.1111/j.1399-3054.2011.01551, 2012.
Cole, J. J. and Caraco, N. F.: Atmospheric exchange of carbon dioxide in a
low-wind oligotrophic lake measured by the addition of SF6, Limnol.
Oceanogr., 43, 647–656, https://doi.org/10.4319/lo.1998.43.4.0647, 1998.
Damm, E., Helmke, E., Thoms, S., Schauer, U., Nöthig, E., Bakker, K.,
and Kiene, R. P.: Methane production in aerobic oligotrophic surface water
in the central Arctic Ocean, Biogeosciences, 7, 1099–1108, https://doi.org/10.5194/bg-7-1099-2010, 2010.
DelSontro, T., McGinnis, D. F., Wehrli, B., and Ostrovsky, I.: Size does
matter: Importance of large bubbles and small-scale hot spots for methane
transport, Environ. Sci. Technol., 49, 1268–1276, https://doi.org/10.1021/es5054286,
2015.
DelSontro, T., del Giorgio, P. A., and Prairie, Y. T.: No longer a paradox:
the interaction between physical transport and biological processes explains
the spatial distribution of surface water methane within and across lakes,
Ecosystems, 21, 1073–1087, https://doi.org/10.1007/s10021-017-0205-1, 2018.
Delwiche, K. B. and Hemond, H. F.: Methane bubble size distributions, flux,
and dissolution in a freshwater lake, Environ. Sci. Technol., 51, 13733–13739,
https://doi.org/10.1021/acs.est.7b04243, 2017.
Denman, S. E., Tomkins, N. W., and McSweeney, C. S.: Quantitation and
diversity analysis of ruminal methanogenic populations in response to the
antimethanogenic compound bromochloromethane, FEMS Microbiol. Ecol.,
62, 313–322, https://doi.org/10.1111/j.1574-6941.2007.00394.x, 2007.
Descy, J. P., Darchambeau, F., Lambert, T., Stoyneva-Gaertner, M. P.,
Bouillon, S., and Borges, A. V.: Phytoplankton dynamics in the Congo River,
Freshwater Biol., 62, 87–101, 2017.
Donis, D., Flury, S., Stöckli, A., Spangenberg, J. E., Vachon, D., and
McGinnis, D. F.: Full-scale evaluation of methane production under
oxic conditions in a mesotrophic lake, Nat. Commun., 8, 1661,
https://doi.org/10.1038/s41467-017-01648-4, 2017.
Dumestre, J. F., Guézennec, J., Galy-Lacaux, C., Delmas, R., Richard,
S., and Labroue, L.: Influence of Light Intensity on Methanotrophic Bacterial Activity in Petit Saut Reservoir, French Guiana, Appl. Environ. Microbiol., 65, 534–539, https://doi.org/10.1128/aem.65.2.534-539.1999, 1999.
Fernández, J. E., Peeters, F., and Hofmann, H.: On the methane paradox:
Transport from shallow water zones rather than in situ methanogenesis is the
major source of CH4 in the open surface water of lakes, J.
Geophys. Res.-Biogeo., 121, 2717–2726, https://doi.org/10.1002/2016JG003586, 2016.
French, E., Kozlowski, J. A., Mukherjee, M., Bullerjahn, G., and Bollmann,
A.: Ecophysiological characterization of ammonia-oxidizing archaea and
bacteria from freshwater, Appl. Environ. Microbiol., 78,
5773–5780, https://doi.org/10.1128/aem.00432-12, 2012.
Gillikin, D. P. and Bouillon, S.: Determination of delta O-18 of water and
delta C-13 of dissolved inorganic carbon using a simple modification of an
elemental analyzer-isotope ratio mass spectrometer: an evaluation, Rapid
Commun. Mass Sp., 21, 1475–1478,
https://doi.org/10.1002/rcm.2968, 2007.
Greinert, J. and McGinnis, D. F.: Single Bubble Dissolution Model: The
Graphical User Interface SiBu-GUI, Environ. Modell. Softw., 24, 1012–1013,
https://doi.org/10.1016/j.envsoft.2008.12.011, 2009.
Grossart, H. P., Frindte, K., Dziallas, C., Eckert, W., and Tang, K. W.:
Microbial methane production in oxygenated water column of an oligotrophic
lake, P. Natl. Acad. Sci. USA, 108, 19657–19661,
https://doi.org/10.1073/pnas.1110716108, 2011.
Günthel, M., Donis, D., Kirillin, G., Ionescu, D., Bizic, M., McGinnis,
D. F., Grossart, H. P., and Tang, K. W.: Contribution of oxic methane
production to surface methane emission in lakes and its global importance,
Nat. Commun., 10, 5497, https://doi.org/10.1038/s41467-019-13320-0, 2019.
Hama, T., Miyazaki, T., Ogawa, Y., Iwakuma, T., Takahashi, M., Otsuki, A.,
and Ichimura, S.: Measurement of photosynthetic production of a marine
phytoplankton population using a stable 13C isotope, Mar. Biol., 73,
31–36, https://doi.org/10.1007/BF00396282, 1983.
Hofmann, H., Federwisch, L., and Peeters, F.: Wave-induced release of
methane: littoral zones as source of methane in lakes, Limnol.
Oceanogr., 55, 1990–2000, https://doi.org/10.4319/lo.2010.55.5.1990, 2010.
Klindworth, A., Pruesse, E., Schweer, T., Peplies, J., Quast, C., Horn, M.,
and Glöckner, F. O.: Evaluation of general 16S ribosomal RNA gene PCR
primers for classical and next-generation se,quencing-based diversity
studies, Nucleic Acids Res., 41, e1, https://doi.org/10.1093/nar/gks808, 2013.
Klintzsch, T., Langer, G., Nehrke, G., Wieland, A., Lenhart, K., and
Keppler, F.: Methane production by three widespread marine phytoplankton
species: release rates, precursor compounds, and potential relevance for the
environment, Biogeosciences, 16, 4129–4144, https://doi.org/10.5194/bg-16-4129-2019, 2019.
Kosten, S., Huszar, V. L., Bécares, E., Costa, L. S., van Donk, E.,
Hansson, L. A., Jeppesen, E., Kruk, C., Lacerot, G., Mazzeo, N., De Meester,
L., Moss, B., Lurling, M., Noges, T., Romo, S., and Scheffer, M.: Warmer
climates boost cyanobacterial dominance in shallow lakes, Glob. Change
Biol., 18, 118–126, https://doi.org/10.1111/j.1365-2486.2011.02488.x, 2012.
Kozich, J. J., Westcott, S. L., Baxter, N. T., Highlander, S. K., and
Schloss, P. D.: Development of a dual-index sequencing strategy and curation
pipeline for analyzing amplicon sequence data on the MiSeq Illumina
sequencing platform, Appl. Environ. Microbiol., 79, 5112–5120, https://doi.org/10.1128/aem.01043-13, 2013.
Lehner, B. and Döll, P.: Development and validation of a global database of
lakes, reservoirs and wetlands, J. Hydrol., 296, 1–22, https://doi.org/10.1016/j.jhydrol.2004.03.028, 2004.
Lenhart, K., Klintzsch, T., Langer, G., Nehrke, G., Bunge, M., Schnell, S.,
and Keppler, F.: Evidence for methane production by the marine algae
Emiliania huxleyi, Biogeosciences, 13, 3163–3174,
https://doi.org/10.5194/bg-13-3163-2016, 2016.
Levine, R. L., Mosoni, L., Berlett, B. S., and Stadtman, E. R.: Methionine
residues as endogenous antioxidants in proteins, P. Natl.
Acad. Sci. USA, 93, 15036–15040, https://doi.org/10.1073/pnas.93.26.15036,
1996.
Lewis Jr., W. M.: Tropical limnology, Annu. Rev. Ecol.
Syst., 18, 159–184, https://doi.org/10.1146/annurev.es.18.110187.001111, 1987.
Martinez-Cruz, K., Sepulveda-Jauregui, A., Greene, S., Fuchs, A., Rodriguez,
M., Pansch, N., Gonsiorczyk, T., and Casper, P.: Diel variation of CH4 and
CO2 dynamics in two contrasting temperate lakes, Inland Waters, 10, 333–347, https://doi.org/10.1080/20442041.2020.1728178, 2020.
McGinnis, D. F., Greinert, J., Artemov, Y., Beaubien, S. E., and Wüest,
A. N. D. A.: Fate of rising methane bubbles in stratified waters: How much
methane reaches the atmosphere?, J. Geophys. Res.-Ocean.,
111, C09007, https://doi.org/10.1029/2005JC003183, 2006.
Mohr, W., Grosskopf, T., Wallace, D. W., and LaRoche, J.: Methodological
underestimation of oceanic nitrogen fixation rates, PloS One, 5, e12583,
https://doi.org/10.1371/journal.pone.0012583, 2010.
Montoya, J. P., Voss, M., Kahler, P., and Capone, D. G.: A Simple,
High-Precision, High-Sensitivity Tracer Assay for N (inf2) Fixation, Appl.
Environ. Microbiol., 62, 986–993, https://doi.org/10.1128/aem.62.3.986-993.1996,
1996
Morana, C., Sarmento, H., Descy, J. P., Gasol, J. M., Borges, A. V.,
Bouillon, S., and Darchambeau, F.: Production of dissolved organic matter
by phytoplankton and its uptake by heterotrophic prokaryotes in large
tropical lakes, Limnol. Oceanogr., 59,
1364–1375, https://doi.org/10.4319/lo.2014.59.4.1364, 2014.
Morana, C., Darchambeau, F., Roland, F. A. E., Borges, A. V., Muvundja, F., Kelemen, Z., Masilya, P., Descy, J.-P., and Bouillon, S.: Biogeochemistry of a large and deep tropical lake (Lake Kivu, East Africa: insights from a stable isotope study covering an annual cycle, Biogeosciences, 12, 4953–4963, https://doi.org/10.5194/bg-12-4953-2015, 2015a.
Morana, C., Borges, A. V., Roland, F. A. E., Darchambeau, F., Descy, J. P.,
and Bouillon, S.: Methanotrophy within the water column of a large
meromictic tropical lake (Lake Kivu, East Africa), Biogeosciences, 12,
2077–2088, https://doi.org/10.5194/bg-12-2077-2015, 2015b.
Mountfort, D. O. and Asher, R. A.: Effect of inorganic sulfide on the growth
and metabolism of Methanosarcina barkeri strain DM, Appl. Environ.
Microbiol., 37, 670–675, 1979.
Mugidde, R., Hecky, R. E., Hendzel, L. L., and Taylor, W. D.: Pelagic
nitrogen fixation in lake Victoria (East Africa), J. Great Lakes
Res., 29, 76–88, https://doi.org/10.1016/S0380-1330(03)70540-1, 2003.
Murase, J. and Sugimoto, A: Inhibitory effect of light on methane
oxidation in the pelagic water column of a mesotrophic lake (Lake Biwa,
Japan), Limnol. Oceanogr., 50, 1339–1343, https://doi.org/10.4319/lo.2005.50.4.1339, 2005.
Peeters, F., Fernandez, J. E., and Hofmann, H.: Sediment fluxes rather than
oxic methanogenesis explain diffusive CH4 emissions from lakes and
reservoirs, Sci. Rep., 9, 1–10, https://doi.org/10.1038/s41598-018-36530-w, 2019.
Petrillo, E., Herz, M. A. G., Fuchs, A., Reifer, D., Fuller, J., Yanovsky,
M. J., Simpson, C., Brown, J. W. S., Barta, A., Kalyna, M., and Kornblihtt,
A. R.: A chloroplast retrograde signal regulates nuclear alternative
splicing, Science, 344, 427–430, https://doi.org/10.1126/science.1250322, 2014.
Repine, J. E., Eaton, J. W., Anders, M. W., Hoidal, J. R., and Fox, R. B.:
Generation of hydroxyl radical by enzymes, chemicals, and human phagocytes
in vitro: detection with the anti-inflammatory agent, dimethyl sulfoxide,
J. Clin. Invest., 64, 1642–1651, https://doi.org/10.1172/jci109626, 1979.
Sarmento, H., Romera-Castillo, C., Lindh, M., Pinhassi, J., Sala, M. M.,
Gasol, J. M., Marassé, C., and Taylor, G. T.: Phytoplankton
species-specific release of dissolved free amino acids and their selective
consumption by bacteria, Limnol. Oceanogr., 58, 1123–1135, https://doi.org/10.4319/lo.2013.58.3.1123, 2013.
Tang, K. W., McGinnis, D. F., Ionescu, D., and Grossart, H. P.: Methane
production in oxic lake waters potentially increases aquatic methane flux to
air, Environ. Sci. Technol. Lett., 3, 227–233, https://doi.org/10.1021/acs.estlett.6b00150, 2016.
Tolar, B. B., Powers, L. C., Miller, W. L., Wallsgrove, N. J., Popp, B. N.,
and Hollibaugh, J. T.: Ammonia oxidation in the ocean can be inhibited by
nanomolar concentrations of hydrogen peroxide, Front. Mar. Sci.,
3, 237, https://doi.org/10.3389/fmars.2016.00237, 2016
Vollenweider, R. A.: Calculations models of photosynthesis-depth curves and
some implications regarding day rate estimates in primary production
measurements, Memorie dell'Istituto Italiano di Idrobiologia, 18, 425–457,
1965.
Wanninkhof, R.: Relationship between wind speed and gas exchange over the
ocean, J. Geophys. Res.-Ocean., 97, 7373–7382, https://doi.org/10.1029/92JC00188, 1992.
Yao, M., Henny, C., and Maresca, J. A.: Freshwater bacteria release methane
as a byproduct of phosphorus acquisition, Appl. Environ.
Microbiol., 82, 6994–7003, https://doi.org/10.1128/aem.02399-16, 2016.
Yvon-Durocher, G., Allen, A. P., Bastviken, D., Conrad, R., Gudasz, C.,
St-Pierre, A., Thanh-Duc, N., and Del Giorgio, P. A.: Methane fluxes show
consistent temperature dependence across microbial to ecosystem scales,
Nature, 507, 488–491, https://doi.org/10.1038/nature13164, 2014.
Short summary
A growing body of studies challenges the paradigm that methane (CH4) production occurs only under anaerobic conditions. Our field experiments revealed that oxic CH4 production is closely related to phytoplankton metabolism and is indeed a common feature in five contrasting African lakes. Nevertheless, we found that methanotrophic activity in surface waters and CH4 emissions to the atmosphere were predominantly fuelled by CH4 generated in sediments and physically transported to the surface.
A growing body of studies challenges the paradigm that methane (CH4) production occurs only...
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