Articles | Volume 20, issue 18
https://doi.org/10.5194/bg-20-3737-2023
© Author(s) 2023. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/bg-20-3737-2023
© Author(s) 2023. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Technical note
| 
15 Sep 2023
Technical note |
| 15 Sep 2023
| 15 Sep 2023
Technical note: Skirt chamber – an open dynamic method for the rapid and minimally intrusive measurement of greenhouse gas emissions from peatlands
Departamento de Biotecnología y Bioingeniería, Centro de
Investigación y de Estudios Avanzados del Instituto Politécnico
Nacional (Cinvestav), Mexico City, 07360, Mexico
Cape Horn International Center, Universidad de Magallanes, Puerto
Williams, 6350000, Chile
Brenda Riquelme
Cape Horn International Center, Universidad de Magallanes, Puerto
Williams, 6350000, Chile
Biodiversity of Antarctic and Subantarctic
Ecosystems (BASE), Millennium Institute, Santiago, 7800003, Chile
Andrés Gómez
Cape Horn International Center, Universidad de Magallanes, Puerto
Williams, 6350000, Chile
Roy Mackenzie
Cape Horn International Center, Universidad de Magallanes, Puerto
Williams, 6350000, Chile
Biodiversity of Antarctic and Subantarctic
Ecosystems (BASE), Millennium Institute, Santiago, 7800003, Chile
Francisco Javier Aguirre
Cape Horn International Center, Universidad de Magallanes, Puerto
Williams, 6350000, Chile
Jorge Hoyos-Santillan
Cape Horn International Center, Universidad de Magallanes, Puerto
Williams, 6350000, Chile
Environmental Biogeochemistry Laboratory, Centro de Investigación
Gaia Antártica (CIGA), Universidad de Magallanes, Punta Arenas, 6210427,
Chile
Center for Climate and Resilience Research (CR)2, Universidad de
Chile, Santiago, 7800003, Chile
Ricardo Rozzi
Cape Horn International Center, Universidad de Magallanes, Puerto
Williams, 6350000, Chile
Armando Sepulveda-Jauregui
CORRESPONDING AUTHOR
Cape Horn International Center, Universidad de Magallanes, Puerto
Williams, 6350000, Chile
Environmental Biogeochemistry Laboratory, Centro de Investigación
Gaia Antártica (CIGA), Universidad de Magallanes, Punta Arenas, 6210427,
Chile
Center for Climate and Resilience Research (CR)2, Universidad de
Chile, Santiago, 7800003, Chile
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Frederic Thalasso, Julio A. Salas-Rabaza, Brenda Riquelme del Río, Jorge F. Perez-Quezada, Cristian Gajardo, and Matías Troncoso-Villar
EGUsphere, https://doi.org/10.5194/egusphere-2025-1357, https://doi.org/10.5194/egusphere-2025-1357, 2025
This preprint is open for discussion and under review for Biogeosciences (BG).
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Peatlands are complex and widespread ecosystems that store large amounts of carbon through photosynthesis. Carbon fixation depends on solar irradiance, and the relationship between them is called the photosynthesis-irradiance or “PI” curve. We developed a simple, portable chamber to measure PI curves in peatlands, taking into account complex plant assemblages and microhabitat variability. This tool may help scientists better understand carbon dynamics in these ecosystems.
Frederic Thalasso, Katey Walter Anthony, Olya Irzak, Ethan Chaleff, Laughlin Barker, Peter Anthony, Philip Hanke, and Rodrigo Gonzalez-Valencia
Hydrol. Earth Syst. Sci., 24, 6047–6058, https://doi.org/10.5194/hess-24-6047-2020, https://doi.org/10.5194/hess-24-6047-2020, 2020
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Methane (CH4) seepage is the steady or episodic flow of gaseous hydrocarbons from subsurface reservoirs that has been identified as a significant source of atmospheric CH4. The monitoring of these emissions is important and despite several available methods, large macroseeps are still difficult to measure due to a lack of a lightweight and inexpensive method deployable in remote environments. Here, we report the development of a mobile chamber for measuring intense CH4 macroseepage in lakes.
K. Martinez-Cruz, A. Sepulveda-Jauregui, K. Walter Anthony, and F. Thalasso
Biogeosciences, 12, 4595–4606, https://doi.org/10.5194/bg-12-4595-2015, https://doi.org/10.5194/bg-12-4595-2015, 2015
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We assessed the importance of aerobic CH4 oxidation in Alaskan lakes. We conducted field measurement of dissolved CH4 and O2 together with determination of the CH4 oxidation rate. We found that during winter, CH4 oxidation was limited by O2 concentration and during summer, by CH4 concentration. In addition to seasonal variations, the type of permafrost on which the lakes were located was identified as a key factor, indicating that landscape processes play an important role in lake CH4 cycling.
A. Sepulveda-Jauregui, K. M. Walter Anthony, K. Martinez-Cruz, S. Greene, and F. Thalasso
Biogeosciences, 12, 3197–3223, https://doi.org/10.5194/bg-12-3197-2015, https://doi.org/10.5194/bg-12-3197-2015, 2015
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This study of methane (CH4) and carbon dioxide (CO2) emission modes from 40 lakes along a latitudinal transect in Alaska revealed that thermokarst lakes formed in Pleistocene-aged icy, organic-rich yedoma-type permafrost had the highest emissions. Ebullition and diffusion were the dominant modes of CH4 and CO2 emissions, respectively. Accounting for the global warming potentials of the gases, the climate warming impact of lake CH4 emissions was 2 times higher than that of CO2.
Frederic Thalasso, Julio A. Salas-Rabaza, Brenda Riquelme del Río, Jorge F. Perez-Quezada, Cristian Gajardo, and Matías Troncoso-Villar
EGUsphere, https://doi.org/10.5194/egusphere-2025-1357, https://doi.org/10.5194/egusphere-2025-1357, 2025
This preprint is open for discussion and under review for Biogeosciences (BG).
Short summary
Short summary
Peatlands are complex and widespread ecosystems that store large amounts of carbon through photosynthesis. Carbon fixation depends on solar irradiance, and the relationship between them is called the photosynthesis-irradiance or “PI” curve. We developed a simple, portable chamber to measure PI curves in peatlands, taking into account complex plant assemblages and microhabitat variability. This tool may help scientists better understand carbon dynamics in these ecosystems.
Frederic Thalasso, Katey Walter Anthony, Olya Irzak, Ethan Chaleff, Laughlin Barker, Peter Anthony, Philip Hanke, and Rodrigo Gonzalez-Valencia
Hydrol. Earth Syst. Sci., 24, 6047–6058, https://doi.org/10.5194/hess-24-6047-2020, https://doi.org/10.5194/hess-24-6047-2020, 2020
Short summary
Short summary
Methane (CH4) seepage is the steady or episodic flow of gaseous hydrocarbons from subsurface reservoirs that has been identified as a significant source of atmospheric CH4. The monitoring of these emissions is important and despite several available methods, large macroseeps are still difficult to measure due to a lack of a lightweight and inexpensive method deployable in remote environments. Here, we report the development of a mobile chamber for measuring intense CH4 macroseepage in lakes.
K. Martinez-Cruz, A. Sepulveda-Jauregui, K. Walter Anthony, and F. Thalasso
Biogeosciences, 12, 4595–4606, https://doi.org/10.5194/bg-12-4595-2015, https://doi.org/10.5194/bg-12-4595-2015, 2015
Short summary
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We assessed the importance of aerobic CH4 oxidation in Alaskan lakes. We conducted field measurement of dissolved CH4 and O2 together with determination of the CH4 oxidation rate. We found that during winter, CH4 oxidation was limited by O2 concentration and during summer, by CH4 concentration. In addition to seasonal variations, the type of permafrost on which the lakes were located was identified as a key factor, indicating that landscape processes play an important role in lake CH4 cycling.
J. K. Heslop, K. M. Walter Anthony, A. Sepulveda-Jauregui, K. Martinez-Cruz, A. Bondurant, G. Grosse, and M. C. Jones
Biogeosciences, 12, 4317–4331, https://doi.org/10.5194/bg-12-4317-2015, https://doi.org/10.5194/bg-12-4317-2015, 2015
Short summary
Short summary
The relative magnitude of thermokarst lake CH4 production in surface sediments vs. deeper-thawed permafrost is not well understood. We assessed CH4 production potentials from a lake sediment core and adjacent permafrost tunnel in interior Alaska. CH4 production was highest in the organic-rich surface lake sediments and recently thawed permafrost at the bottom of the talik, implying CH4 production is highly variable and that both modern and ancient OM are important to lake CH4 production.
A. Sepulveda-Jauregui, K. M. Walter Anthony, K. Martinez-Cruz, S. Greene, and F. Thalasso
Biogeosciences, 12, 3197–3223, https://doi.org/10.5194/bg-12-3197-2015, https://doi.org/10.5194/bg-12-3197-2015, 2015
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This study of methane (CH4) and carbon dioxide (CO2) emission modes from 40 lakes along a latitudinal transect in Alaska revealed that thermokarst lakes formed in Pleistocene-aged icy, organic-rich yedoma-type permafrost had the highest emissions. Ebullition and diffusion were the dominant modes of CH4 and CO2 emissions, respectively. Accounting for the global warming potentials of the gases, the climate warming impact of lake CH4 emissions was 2 times higher than that of CO2.
S. Greene, K. M. Walter Anthony, D. Archer, A. Sepulveda-Jauregui, and K. Martinez-Cruz
Biogeosciences, 11, 6791–6811, https://doi.org/10.5194/bg-11-6791-2014, https://doi.org/10.5194/bg-11-6791-2014, 2014
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Methane (CH4) bubbles emitted from the anoxic sediments of northern lakes constitute a significant methane flux to the atmosphere, but entrapment by seasonal lake ice impedes bubble release to the atmosphere. Using numerical modeling and field measurement of a lake in Alaska, we found that 80% of CH4 in ice-trapped bubbles dissolves into the water column. Microbes consume half of that CH4. Emission by bubbling is greatest in summer but continues in winter through some open holes in lake ice.
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Carbon sequestration in different urban vegetation types in Southern Finland
Proglacial methane emissions driven by meltwater and groundwater flushing in a high-Arctic glacial catchment
Seasonal and interannual variability in CO2 fluxes in southern Africa seen by GOSAT
Air temperature and precipitation constraining the modelled wetland methane emissions in a boreal region in northern Europe
Ensemble estimates of global wetland methane emissions over 2000–2020
Seasonal carbon fluxes from vegetation and soil in a Mediterranean non-tidal salt marsh
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Roxanne Daelman, Marijn Bauters, Matti Barthel, Emmanuel Bulonza, Lodewijk Lefevre, José Mbifo, Johan Six, Klaus Butterbach-Bahl, Benjamin Wolf, Ralf Kiese, and Pascal Boeckx
Biogeosciences, 22, 1529–1542, https://doi.org/10.5194/bg-22-1529-2025, https://doi.org/10.5194/bg-22-1529-2025, 2025
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The increase in atmospheric concentrations of several greenhouse gases (GHGs) since 1750 is attributed to human activity. However, natural ecosystems, such as tropical forests, also contribute to GHG budgets. The Congo Basin hosts the second largest tropical forest and is understudied. In this study, measurements of soil GHG exchange were carried out during 16 months in a tropical forest in the Congo Basin. Overall, the soil acted as a major source of CO2 and N2O and a minor sink of CH4.
Olli-Pekka Tikkasalo, Olli Peltola, Pavel Alekseychik, Juha Heikkinen, Samuli Launiainen, Aleksi Lehtonen, Qian Li, Eduardo Martínez-García, Mikko Peltoniemi, Petri Salovaara, Ville Tuominen, and Raisa Mäkipää
Biogeosciences, 22, 1277–1300, https://doi.org/10.5194/bg-22-1277-2025, https://doi.org/10.5194/bg-22-1277-2025, 2025
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The emissions of greenhouse gases (GHGs) carbon dioxide (CO2), methane (CH4) and nitrous oxide (N2O) were measured from a clear-cut peatland forest site. The measurements covered the whole year of 2022, which was the second growing season after the clear-cut. The site was a strong GHG source, and the highest emissions came from CO2, followed by N2O and CH4. A statistical model that included information on different surfaces at the site was developed to unravel surface-type-specific GHG fluxes.
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Biogeosciences, 22, 1149–1162, https://doi.org/10.5194/bg-22-1149-2025, https://doi.org/10.5194/bg-22-1149-2025, 2025
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Studies show that saltmarshes excel at capturing carbon from the atmosphere. In this study, we measured CO2 flux in an Australian temperate saltmarsh on French Island. The temperate saltmarsh exhibited strong seasonality. During the warmer growing season, the saltmarsh absorbed 10.5 g CO2 m−2 on average daily from the atmosphere. Even in winter, when plants were dormant, it continued to be a CO2 sink, albeit a smaller one. Cool temperatures and high cloud cover inhibit carbon sequestration.
Sebastian F. A. Jordan, Stefan Schloemer, Martin Krüger, Tanja Heffner, Marcus A. Horn, and Martin Blumenberg
Biogeosciences, 22, 809–830, https://doi.org/10.5194/bg-22-809-2025, https://doi.org/10.5194/bg-22-809-2025, 2025
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Using a multilayer approach, we studied the methane flux, soil gas composition, and isotopic signatures of soil methane and carbon dioxide at eight cut and buried abandoned oil wells in a peat-rich area of northern Germany. The detected methane emissions were of biogenic, peat origin and were not associated with the abandoned wells. Additional microbial analysis and methane oxidation rate measurements demonstrated a high methane emission mitigation potential in the studied peat soils.
Laura Thölix, Leif Backman, Minttu Havu, Esko Karvinen, Jesse Soininen, Justine Trémeau, Olli Nevalainen, Joyson Ahongshangbam, Leena Järvi, and Liisa Kulmala
Biogeosciences, 22, 725–749, https://doi.org/10.5194/bg-22-725-2025, https://doi.org/10.5194/bg-22-725-2025, 2025
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Cities aim for carbon neutrality and seek to understand urban vegetation's role as a carbon sink. Direct measurements are challenging, so models are used to estimate the urban carbon cycle. We evaluated model performance at estimating carbon sequestration in lawns, park trees, and urban forests in Helsinki, Finland. Models captured seasonal and annual variations well. Trees had higher sequestration rates than lawns, and irrigation often enhanced carbon sinks.
Gabrielle E. Kleber, Leonard Magerl, Alexandra V. Turchyn, Stefan Schloemer, Mark Trimmer, Yizhu Zhu, and Andrew Hodson
Biogeosciences, 22, 659–674, https://doi.org/10.5194/bg-22-659-2025, https://doi.org/10.5194/bg-22-659-2025, 2025
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Our research on Svalbard shows that glacier melt rivers can transport large amounts of methane, a potent greenhouse gas. By studying a glacier over one summer, we found that its river was highly concentrated in methane, suggesting that rivers could provide a significant source of methane emissions as the Arctic warms and glaciers melt. This is the first time such emissions have been measured on Svalbard, indicating a wider environmental concern as such processes are occurring across the Arctic.
Eva-Marie Metz, Sanam Noreen Vardag, Sourish Basu, Martin Jung, and André Butz
Biogeosciences, 22, 555–584, https://doi.org/10.5194/bg-22-555-2025, https://doi.org/10.5194/bg-22-555-2025, 2025
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We estimate CO2 fluxes in semiarid southern Africa from 2009 to 2018 based on satellite CO2 measurements and atmospheric inverse modeling. By selecting process-based vegetation models, which agree with the satellite CO2 fluxes, we find that soil respiration mainly drives the seasonality, whereas photosynthesis substantially influences the interannual variability. Our study emphasizes the need for better representation of the response of semiarid ecosystems to soil rewetting in vegetation models.
Tuula Aalto, Aki Tsuruta, Jarmo Mäkelä, Jurek Müller, Maria Tenkanen, Eleanor Burke, Sarah Chadburn, Yao Gao, Vilma Mannisenaho, Thomas Kleinen, Hanna Lee, Antti Leppänen, Tiina Markkanen, Stefano Materia, Paul A. Miller, Daniele Peano, Olli Peltola, Benjamin Poulter, Maarit Raivonen, Marielle Saunois, David Wårlind, and Sönke Zaehle
Biogeosciences, 22, 323–340, https://doi.org/10.5194/bg-22-323-2025, https://doi.org/10.5194/bg-22-323-2025, 2025
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Wetland methane responses to temperature and precipitation were studied in a boreal wetland-rich region in northern Europe using ecosystem models, atmospheric inversions, and upscaled flux observations. The ecosystem models differed in their responses to temperature and precipitation and in their seasonality. However, multi-model means, inversions, and upscaled fluxes had similar seasonality, and they suggested co-limitation by temperature and precipitation.
Zhen Zhang, Benjamin Poulter, Joe R. Melton, William J. Riley, George H. Allen, David J. Beerling, Philippe Bousquet, Josep G. Canadell, Etienne Fluet-Chouinard, Philippe Ciais, Nicola Gedney, Peter O. Hopcroft, Akihiko Ito, Robert B. Jackson, Atul K. Jain, Katherine Jensen, Fortunat Joos, Thomas Kleinen, Sara H. Knox, Tingting Li, Xin Li, Xiangyu Liu, Kyle McDonald, Gavin McNicol, Paul A. Miller, Jurek Müller, Prabir K. Patra, Changhui Peng, Shushi Peng, Zhangcai Qin, Ryan M. Riggs, Marielle Saunois, Qing Sun, Hanqin Tian, Xiaoming Xu, Yuanzhi Yao, Yi Xi, Wenxin Zhang, Qing Zhu, Qiuan Zhu, and Qianlai Zhuang
Biogeosciences, 22, 305–321, https://doi.org/10.5194/bg-22-305-2025, https://doi.org/10.5194/bg-22-305-2025, 2025
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This study assesses global methane emissions from wetlands between 2000 and 2020 using multiple models. We found that wetland emissions increased by 6–7 Tg CH4 yr-1 in the 2010s compared to the 2000s. Rising temperatures primarily drove this increase, while changes in precipitation and CO2 levels also played roles. Our findings highlight the importance of wetlands in the global methane budget and the need for continuous monitoring to understand their impact on climate change.
Lorena Carrasco-Barea, Dolors Verdaguer, Maria Gispert, Xavier D. Quintana, Hélène Bourhis, and Laura Llorens
Biogeosciences, 22, 289–304, https://doi.org/10.5194/bg-22-289-2025, https://doi.org/10.5194/bg-22-289-2025, 2025
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Carbon dioxide fluxes have been measured seasonally in four plant species in a Mediterranean non-tidal salt marsh, highlighting the high carbon removal potential that these species have. Carbon dioxide and methane emissions from soil showed high variability among the habitats studied, and they were generally higher than those observed in tidal salt marshes. Our results are important for making more accurate predictions regarding carbon emissions from these ecosystems.
Ekaterina Ezhova, Topi Laanti, Anna Lintunen, Pasi Kolari, Tuomo Nieminen, Ivan Mammarella, Keijo Heljanko, and Markku Kulmala
Biogeosciences, 22, 257–288, https://doi.org/10.5194/bg-22-257-2025, https://doi.org/10.5194/bg-22-257-2025, 2025
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Machine learning (ML) models are gaining popularity in biogeosciences. They are applied as gap-filling methods and used to upscale carbon fluxes to larger areas. Here we use explainable artificial intelligence (XAI) methods to elucidate the performance of machine learning models for carbon dioxide fluxes in boreal forests. We show that statistically equal models treat input variables differently. XAI methods can help scientists make informed decisions when applying ML models in their research.
Jessica Breavington, Alexandra Steckbauer, Chuancheng Fu, Mongi Ennasri, and Carlos M. Duarte
Biogeosciences, 22, 117–134, https://doi.org/10.5194/bg-22-117-2025, https://doi.org/10.5194/bg-22-117-2025, 2025
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Mangrove carbon storage in the Red Sea is lower than average due to challenging growth conditions. We collected mangrove soil cores over multiple seasons to measure greenhouse gas (GHG) flux of carbon dioxide and methane. GHG emissions are a small offset to mangrove carbon storage overall but punctuated by periods of high emission. This variation is linked to environmental and soil properties, which were also measured. The findings aid understanding of GHG dynamics in arid mangrove ecosystems.
Johnathan Daniel Maxey, Neil D. Hartstein, Hermann W. Bange, and Moritz Müller
Biogeosciences, 21, 5613–5637, https://doi.org/10.5194/bg-21-5613-2024, https://doi.org/10.5194/bg-21-5613-2024, 2024
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The distribution of N2O in fjord-like estuaries is poorly described in the Southern Hemisphere. Our study describes N2O distribution and its drivers in one such system in Macquarie Harbour, Tasmania. Water samples were collected seasonally in 2022 and 2023. Results show the system removes atmospheric N2O when river flow is high, whereas the system emits N2O when the river flow is low. N2O generated in basins is intercepted by the surface water and exported to the ocean during high river flow.
Wael Al Hamwi, Maren Dubbert, Jörg Schaller, Matthias Lück, Marten Schmidt, and Mathias Hoffmann
Biogeosciences, 21, 5639–5651, https://doi.org/10.5194/bg-21-5639-2024, https://doi.org/10.5194/bg-21-5639-2024, 2024
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We present a fully automatic, low-cost soil–plant enclosure system to monitor CO2 and evapotranspiration fluxes within greenhouse experiments. It operates in two modes: independent, using low-cost sensors, and dependent, where multiple chambers connect to a single gas analyzer via a low-cost multiplexer. This system provides precise, accurate measurements and high temporal resolution, enabling comprehensive monitoring of plant–soil responses to various treatments and conditions.
Zhao-Jun Yong, Wei-Jen Lin, Chiao-Wen Lin, and Hsing-Juh Lin
Biogeosciences, 21, 5247–5260, https://doi.org/10.5194/bg-21-5247-2024, https://doi.org/10.5194/bg-21-5247-2024, 2024
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We measured CO2 and CH4 fluxes from mangrove stems and soils of Avicennia marina and Kandelia obovata during tidal cycles. Both stem types served as CO2 and CH4 sources, emitting less CH4 than soils, with no difference in CO2 flux. While A. marina stems showed increased CO2 fluxes from low to high tides, they acted as a CH4 sink before flooding and as a source after ebbing. However, K. obovata stems showed no flux pattern. This study highlights the need to consider tidal influence and species.
Ihab Alfadhel, Ignacio Peralta-Maraver, Isabel Reche, Enrique P. Sánchez-Cañete, Sergio Aranda-Barranco, Eva Rodríguez-Velasco, Andrew S. Kowalski, and Penélope Serrano-Ortiz
Biogeosciences, 21, 5117–5129, https://doi.org/10.5194/bg-21-5117-2024, https://doi.org/10.5194/bg-21-5117-2024, 2024
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Inland saline lakes are crucial in the global carbon cycle, but increased droughts may alter their carbon exchange capacity. We measured CO2 and CH4 fluxes in a Mediterranean saline lake using the eddy covariance method under dry and wet conditions. We found the lake acts as a carbon sink during wet periods but not during droughts. These results highlight the importance of saline lakes in carbon sequestration and their vulnerability to climate-change-induced droughts.
Nathaniel B. Weston, Cynthia Troy, Patrick J. Kearns, Jennifer L. Bowen, William Porubsky, Christelle Hyacinthe, Christof Meile, Philippe Van Cappellen, and Samantha B. Joye
Biogeosciences, 21, 4837–4851, https://doi.org/10.5194/bg-21-4837-2024, https://doi.org/10.5194/bg-21-4837-2024, 2024
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Nitrous oxide (N2O) is a potent greenhouse and ozone-depleting gas produced largely from microbial nitrogen cycling processes, and human activities have resulted in increases in atmospheric N2O. We investigate the role of physical and chemical disturbances to soils and sediments in N2O production. We demonstrate that physicochemical perturbation increases N2O production, microbial community adapts over time, and initial perturbation appears to confer resilience to subsequent disturbance.
Sigrid Trier Kjær, Sebastian Westermann, Nora Nedkvitne, and Peter Dörsch
Biogeosciences, 21, 4723–4737, https://doi.org/10.5194/bg-21-4723-2024, https://doi.org/10.5194/bg-21-4723-2024, 2024
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Permafrost peatlands are thawing due to climate change, releasing large quantities of carbon that degrades upon thawing and is released as CO2, CH4 or dissolved organic carbon (DOC). We incubated thawed Norwegian permafrost peat plateaus and thermokarst pond sediment found next to permafrost for up to 350 d to measure carbon loss. CO2 production was initially the highest, whereas CH4 production increased over time. The largest carbon loss was measured at the top of the peat plateau core as DOC.
Silvie Lainela, Erik Jacobs, Stella-Theresa Luik, Gregor Rehder, and Urmas Lips
Biogeosciences, 21, 4495–4519, https://doi.org/10.5194/bg-21-4495-2024, https://doi.org/10.5194/bg-21-4495-2024, 2024
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We evaluate the variability of carbon dioxide and methane in the surface layer of the north-eastern basins of the Baltic Sea in 2018. We show that the shallower coastal areas have considerably higher spatial variability and seasonal amplitude of surface layer pCO2 and cCH4 than measured in the offshore areas of the Baltic Sea. Despite this high variability, caused mostly by coastal physical processes, the average annual air–sea CO2 fluxes differed only marginally between the sub-basins.
Maren Jenrich, Juliane Wolter, Susanne Liebner, Christian Knoblauch, Guido Grosse, Fiona Giebeler, Dustin Whalen, and Jens Strauss
EGUsphere, https://doi.org/10.5194/egusphere-2024-2891, https://doi.org/10.5194/egusphere-2024-2891, 2024
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Climate warming in the Arctic is causing the erosion of permafrost coasts and the transformation of permafrost lakes into lagoons. To understand how this affects greenhouse gas (GHG) emissions, we studied carbon dioxide (CO₂) and methane (CH₄) production in lagoons with varying sea connections. Younger lagoons produce more CH₄, while CO₂ increases in more marine conditions. Flooding of permafrost lowlands due to rising sea levels may lead to higher GHG emissions from Arctic coasts in the future.
Martti Honkanen, Mika Aurela, Juha Hatakka, Lumi Haraguchi, Sami Kielosto, Timo Mäkelä, Jukka Seppälä, Simo-Matti Siiriä, Ken Stenbäck, Juha-Pekka Tuovinen, Pasi Ylöstalo, and Lauri Laakso
Biogeosciences, 21, 4341–4359, https://doi.org/10.5194/bg-21-4341-2024, https://doi.org/10.5194/bg-21-4341-2024, 2024
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The exchange of CO2 between the sea and the atmosphere was studied in the Archipelago Sea, Baltic Sea, in 2017–2021, using an eddy covariance technique. The sea acted as a net source of CO2 with an average yearly emission of 27.1 gC m-2 yr-1, indicating that the marine ecosystem respired carbon that originated elsewhere. The yearly CO2 emission varied between 18.2–39.2 gC m-2 yr-1, mostly due to the yearly variation of ecosystem carbon uptake.
Tea Thum, Tuuli Miinalainen, Outi Seppälä, Holly Croft, Cheryl Rogers, Ralf Staebler, Silvia Caldararu, and Sönke Zaehle
EGUsphere, https://doi.org/10.5194/egusphere-2024-2802, https://doi.org/10.5194/egusphere-2024-2802, 2024
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Climate change has potential to influence the carbon sequestration potential of terrestrial ecosystems and here also nitrogen cycle is important. We used a terrestrial biosphere model QUINCY at mixed deciduous forest in Canada. We investigated the usefulness of using leaf area index and leaf chlorophyll content to improve the parameterization of the model. This work paves way for using spaceborn observations in the model parameterization, also including information on the nitrogen cycle.
Ralf C. H. Aben, Daniël van de Craats, Jim Boonman, Stijn H. Peeters, Bart Vriend, Coline C. F. Boonman, Ype van der Velde, Gilles Erkens, and Merit van den Berg
Biogeosciences, 21, 4099–4118, https://doi.org/10.5194/bg-21-4099-2024, https://doi.org/10.5194/bg-21-4099-2024, 2024
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Drained peatlands cause high CO2 emissions. We assessed the effectiveness of subsurface water infiltration systems (WISs) in reducing CO2 emissions related to increases in water table depth (WTD) on 12 sites for up to 4 years. Results show WISs markedly reduced emissions by 2.1 t CO2-C ha-1 yr-1. The relationship between the amount of carbon above the WTD and CO2 emission was stronger than the relationship between WTD and emission. Long-term monitoring is crucial for accurate emission estimates.
Stavros Stagakis, Dominik Brunner, Junwei Li, Leif Backman, Anni Karvonen, Lionel Constantin, Leena Järvi, Minttu Havu, Jia Chen, Sophie Emberger, and Liisa Kulmala
EGUsphere, https://doi.org/10.5194/egusphere-2024-2475, https://doi.org/10.5194/egusphere-2024-2475, 2024
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The balance between CO2 uptake and emissions from urban green areas is still not well understood. This study evaluated for the first time the urban park CO2 exchange simulations by four different types of biosphere models by comparing them with observations. Even though some advantages and disadvantages of the different model types were identified, there was no strong evidence that more complex models performed better than simple ones.
Ingeborg Bussmann, Eric P. Achterberg, Holger Brix, Nicolas Brüggemann, Götz Flöser, Claudia Schütze, and Philipp Fischer
Biogeosciences, 21, 3819–3838, https://doi.org/10.5194/bg-21-3819-2024, https://doi.org/10.5194/bg-21-3819-2024, 2024
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Methane (CH4) is an important greenhouse gas and contributes to climate warming. However, the input of CH4 from coastal areas to the atmosphere is not well defined. Dissolved and atmospheric CH4 was determined at high spatial resolution in or above the North Sea. The atmospheric CH4 concentration was mainly influenced by wind direction. With our detailed study on the spatial distribution of CH4 fluxes we were able to provide a detailed and more realistic estimation of coastal CH4 fluxes.
Niu Zhu, Jinniu Wang, Dongliang Luo, Xufeng Wang, Cheng Shen, and Ning Wu
Biogeosciences, 21, 3509–3522, https://doi.org/10.5194/bg-21-3509-2024, https://doi.org/10.5194/bg-21-3509-2024, 2024
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Our study delves into the vital role of subalpine forests in the Qinghai–Tibet Plateau as carbon sinks in the context of climate change. Utilizing advanced eddy covariance systems, we uncover their significant carbon sequestration potential, observing distinct seasonal patterns influenced by temperature, humidity, and radiation. Notably, these forests exhibit robust carbon absorption, with potential implications for global carbon balance.
Colette L. Kelly, Nicole M. Travis, Pascale Anabelle Baya, Claudia Frey, Xin Sun, Bess B. Ward, and Karen L. Casciotti
Biogeosciences, 21, 3215–3238, https://doi.org/10.5194/bg-21-3215-2024, https://doi.org/10.5194/bg-21-3215-2024, 2024
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Nitrous oxide, a potent greenhouse gas, accumulates in regions of the ocean that are low in dissolved oxygen. We used a novel combination of chemical tracers to determine how nitrous oxide is produced in one of these regions, the eastern tropical North Pacific Ocean. Our experiments showed that the two most important sources of nitrous oxide under low-oxygen conditions are denitrification, an anaerobic process, and a novel “hybrid” process performed by ammonia-oxidizing archaea.
Hella van Asperen, Thorsten Warneke, Alessandro Carioca de Araújo, Bruce Forsberg, Sávio José Filgueiras Ferreira, Thomas Röckmann, Carina van der Veen, Sipko Bulthuis, Leonardo Ramos de Oliveira, Thiago de Lima Xavier, Jailson da Mata, Marta de Oliveira Sá, Paulo Ricardo Teixeira, Julie Andrews de França e Silva, Susan Trumbore, and Justus Notholt
Biogeosciences, 21, 3183–3199, https://doi.org/10.5194/bg-21-3183-2024, https://doi.org/10.5194/bg-21-3183-2024, 2024
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Carbon monoxide (CO) is regarded as an important indirect greenhouse gas. Soils can emit and take up CO, but, until now, uncertainty remains as to which process dominates in tropical rainforests. We present the first soil CO flux measurements from a tropical rainforest. Based on our observations, we report that tropical rainforest soils are a net source of CO. In addition, we show that valley streams and inundated areas are likely additional hot spots of CO in the ecosystem.
Chaolei Yang, Yufeng Tian, Jingqi Cui, Guangxiong He, Jingyuan Li, Canfeng Li, Haichuang Duan, Zong Wei, Liu Yan, Xin Xia, Yong Huang, and Aihua Jiang
EGUsphere, https://doi.org/10.5194/egusphere-2024-1226, https://doi.org/10.5194/egusphere-2024-1226, 2024
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The environmental factors and CO2 flux of the grassland ecosystem in the dry-hot valley of the Jinsha River exhibited highly seasonal characteristics. During the rainy season, the grassland showed a carbon sink feature, while during the dry season, it exhibited carbon emission status. Throughout the entire year, the grassland ecosystem acted as a weak carbon source, exhibiting a carbon-neutral. The CO2 flux was most influenced by vapor pressure deficit, relative humidity, and soil water content.
Yélognissè Agbohessou, Claire Delon, Manuela Grippa, Eric Mougin, Daouda Ngom, Espoir Koudjo Gaglo, Ousmane Ndiaye, Paulo Salgado, and Olivier Roupsard
Biogeosciences, 21, 2811–2837, https://doi.org/10.5194/bg-21-2811-2024, https://doi.org/10.5194/bg-21-2811-2024, 2024
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Emissions of greenhouse gases in the Sahel are not well represented because they are considered weak compared to the rest of the world. However, natural areas in the Sahel emit carbon dioxide and nitrous oxides, which need to be assessed because of extended surfaces. We propose an assessment of such emissions in Sahelian silvopastoral systems and of how they are influenced by environmental characteristics. These results are essential to inform climate change strategies in the region.
Merit van den Berg, Thomas M. Gremmen, Renske J. E. Vroom, Jacobus van Huissteden, Jim Boonman, Corine J. A. van Huissteden, Ype van der Velde, Alfons J. P. Smolders, and Bas P. van de Riet
Biogeosciences, 21, 2669–2690, https://doi.org/10.5194/bg-21-2669-2024, https://doi.org/10.5194/bg-21-2669-2024, 2024
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Drained peatlands emit 3 % of the global greenhouse gas emissions. Paludiculture is a way to reduce CO2 emissions while at the same time generating an income for landowners. The side effect is the potentially high methane emissions. We found very high methane emissions for broadleaf cattail compared with narrowleaf cattail and water fern. The rewetting was, however, effective to stop CO2 emissions for all species. The highest potential to reduce greenhouse gas emissions had narrowleaf cattail.
Antonio Donateo, Daniela Famulari, Donato Giovannelli, Arturo Mariani, Mauro Mazzola, Stefano Decesari, and Gianluca Pappaccogli
EGUsphere, https://doi.org/10.5194/egusphere-2024-1440, https://doi.org/10.5194/egusphere-2024-1440, 2024
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This study focuses on direct measurements of CO2 and CH4 turbulent eddy covariance fluxes in tundra ecosystems in the Svalbard Islands over a two-year period. Our results reveal dynamic interactions between climatic conditions and ecosystem activities such as photosynthesis and microbial activity. The observed net summertime methane uptake is correlated with the activation and aeration of soil microorganisms. High temperature anomalies increase CO2 and CH4 emissions.
Thea H. Heimdal, Galen A. McKinley, Adrienne J. Sutton, Amanda R. Fay, and Lucas Gloege
Biogeosciences, 21, 2159–2176, https://doi.org/10.5194/bg-21-2159-2024, https://doi.org/10.5194/bg-21-2159-2024, 2024
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Measurements of ocean carbon are limited in time and space. Machine learning algorithms are therefore used to reconstruct ocean carbon where observations do not exist. Improving these reconstructions is important in order to accurately estimate how much carbon the ocean absorbs from the atmosphere. In this study, we find that a small addition of observations from the Southern Ocean, obtained by autonomous sampling platforms, could significantly improve the reconstructions.
Guilherme L. Torres Mendonça, Julia Pongratz, and Christian H. Reick
Biogeosciences, 21, 1923–1960, https://doi.org/10.5194/bg-21-1923-2024, https://doi.org/10.5194/bg-21-1923-2024, 2024
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We study the timescale dependence of airborne fraction and underlying feedbacks by a theory of the climate–carbon system. Using simulations we show the predictive power of this theory and find that (1) this fraction generally decreases for increasing timescales and (2) at all timescales the total feedback is negative and the model spread in a single feedback causes the spread in the airborne fraction. Our study indicates that those are properties of the system, independently of the scenario.
François Clayer, Jan Erik Thrane, Kuria Ndungu, Andrew King, Peter Dörsch, and Thomas Rohrlack
Biogeosciences, 21, 1903–1921, https://doi.org/10.5194/bg-21-1903-2024, https://doi.org/10.5194/bg-21-1903-2024, 2024
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Determination of dissolved greenhouse gas (GHG) in freshwater allows us to estimate GHG fluxes. Mercuric chloride (HgCl2) is used to preserve water samples prior to GHG analysis despite its environmental and health impacts and interferences with water chemistry in freshwater. Here, we tested the effects of HgCl2, two substitutes and storage time on GHG in water from two boreal lakes. Preservation with HgCl2 caused overestimation of CO2 concentration with consequences for GHG flux estimation.
Helena Rautakoski, Mika Korkiakoski, Jarmo Mäkelä, Markku Koskinen, Kari Minkkinen, Mika Aurela, Paavo Ojanen, and Annalea Lohila
Biogeosciences, 21, 1867–1886, https://doi.org/10.5194/bg-21-1867-2024, https://doi.org/10.5194/bg-21-1867-2024, 2024
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Current and future nitrous oxide (N2O) emissions are difficult to estimate due to their high variability in space and time. Several years of N2O fluxes from drained boreal peatland forest indicate high importance of summer precipitation, winter temperature, and snow conditions in controlling annual N2O emissions. The results indicate increasing year-to-year variation in N2O emissions in changing climate with more extreme seasonal weather conditions.
Matthias Koschorreck, Norbert Kamjunke, Uta Koedel, Michael Rode, Claudia Schuetze, and Ingeborg Bussmann
Biogeosciences, 21, 1613–1628, https://doi.org/10.5194/bg-21-1613-2024, https://doi.org/10.5194/bg-21-1613-2024, 2024
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We measured the emission of carbon dioxide (CO2) and methane (CH4) from different sites at the river Elbe in Germany over 3 days to find out what is more important for quantification: small-scale spatial variability or diurnal temporal variability. We found that CO2 emissions were very different between day and night, while CH4 emissions were more different between sites. Dried out river sediments contributed to CO2 emissions, while the side areas of the river were important CH4 sources.
Odysseas Sifounakis, Edwin Haas, Klaus Butterbach-Bahl, and Maria P. Papadopoulou
Biogeosciences, 21, 1563–1581, https://doi.org/10.5194/bg-21-1563-2024, https://doi.org/10.5194/bg-21-1563-2024, 2024
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We performed a full assessment of the carbon and nitrogen cycles of a cropland ecosystem. An uncertainty analysis and quantification of all carbon and nitrogen fluxes were deployed. The inventory simulations include greenhouse gas emissions of N2O, NH3 volatilization and NO3 leaching from arable land cultivation in Greece. The inventory also reports changes in soil organic carbon and nitrogen stocks in arable soils.
Sarah M. Ludwig, Luke Schiferl, Jacqueline Hung, Susan M. Natali, and Roisin Commane
Biogeosciences, 21, 1301–1321, https://doi.org/10.5194/bg-21-1301-2024, https://doi.org/10.5194/bg-21-1301-2024, 2024
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Landscapes are often assumed to be homogeneous when using eddy covariance fluxes, which can lead to biases when calculating carbon budgets. In this study we report eddy covariance carbon fluxes from heterogeneous tundra. We used the footprints of each flux observation to unmix the fluxes coming from components of the landscape. We identified and quantified hot spots of carbon emissions in the landscape. Accurately scaling with landscape heterogeneity yielded half as much regional carbon uptake.
Justine Trémeau, Beñat Olascoaga, Leif Backman, Esko Karvinen, Henriikka Vekuri, and Liisa Kulmala
Biogeosciences, 21, 949–972, https://doi.org/10.5194/bg-21-949-2024, https://doi.org/10.5194/bg-21-949-2024, 2024
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We studied urban lawns and meadows in the Helsinki metropolitan area, Finland. We found that meadows are more resistant to drought events but that they do not increase carbon sequestration compared with lawns. Moreover, the transformation from lawns to meadows did not demonstrate any negative climate effects in terms of greenhouse gas emissions. Even though social and economic aspects also steer urban development, these results can guide planning to consider carbon-smart options.
Guantao Chen, Edzo Veldkamp, Muhammad Damris, Bambang Irawan, Aiyen Tjoa, and Marife D. Corre
Biogeosciences, 21, 513–529, https://doi.org/10.5194/bg-21-513-2024, https://doi.org/10.5194/bg-21-513-2024, 2024
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We established an oil palm management experiment in a large-scale oil palm plantation in Jambi, Indonesia. We recorded oil palm fruit yield and measured soil CO2, N2O, and CH4 fluxes. After 4 years of treatment, compared with conventional fertilization with herbicide weeding, reduced fertilization with mechanical weeding did not reduce yield and soil greenhouse gas emissions, which highlights the legacy effects of over a decade of conventional management prior to the start of the experiment.
Elizabeth Gachibu Wangari, Ricky Mwangada Mwanake, Tobias Houska, David Kraus, Gretchen Maria Gettel, Ralf Kiese, Lutz Breuer, and Klaus Butterbach-Bahl
Biogeosciences, 20, 5029–5067, https://doi.org/10.5194/bg-20-5029-2023, https://doi.org/10.5194/bg-20-5029-2023, 2023
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Agricultural landscapes act as sinks or sources of the greenhouse gases (GHGs) CO2, CH4, or N2O. Various physicochemical and biological processes control the fluxes of these GHGs between ecosystems and the atmosphere. Therefore, fluxes depend on environmental conditions such as soil moisture, soil temperature, or soil parameters, which result in large spatial and temporal variations of GHG fluxes. Here, we describe an example of how this variation may be studied and analyzed.
Laurie C. Menviel, Paul Spence, Andrew E. Kiss, Matthew A. Chamberlain, Hakase Hayashida, Matthew H. England, and Darryn Waugh
Biogeosciences, 20, 4413–4431, https://doi.org/10.5194/bg-20-4413-2023, https://doi.org/10.5194/bg-20-4413-2023, 2023
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As the ocean absorbs 25% of the anthropogenic emissions of carbon, it is important to understand the impact of climate change on the flux of carbon between the ocean and the atmosphere. Here, we use a very high-resolution ocean, sea-ice, carbon cycle model to show that the capability of the Southern Ocean to uptake CO2 has decreased over the last 40 years due to a strengthening and poleward shift of the southern hemispheric westerlies. This trend is expected to continue over the coming century.
Petr Znachor, Jiří Nedoma, Vojtech Kolar, and Anna Matoušů
Biogeosciences, 20, 4273–4288, https://doi.org/10.5194/bg-20-4273-2023, https://doi.org/10.5194/bg-20-4273-2023, 2023
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We conducted intensive spatial sampling of the hypertrophic fishpond to better understand the spatial dynamics of methane fluxes and environmental heterogeneity in fishponds. The diffusive fluxes of methane accounted for only a minor fraction of the total fluxes and both varied pronouncedly within the pond and over the studied summer season. This could be explained only by the water depth. Wind substantially affected temperature, oxygen and chlorophyll a distribution in the pond.
Sofie Sjögersten, Martha Ledger, Matthias Siewert, Betsabé de la Barreda-Bautista, Andrew Sowter, David Gee, Giles Foody, and Doreen S. Boyd
Biogeosciences, 20, 4221–4239, https://doi.org/10.5194/bg-20-4221-2023, https://doi.org/10.5194/bg-20-4221-2023, 2023
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Permafrost thaw in Arctic regions is increasing methane emissions, but quantification is difficult given the large and remote areas impacted. We show that UAV data together with satellite data can be used to extrapolate emissions across the wider landscape as well as detect areas at risk of higher emissions. A transition of currently degrading areas to fen type vegetation can increase emission by several orders of magnitude, highlighting the importance of quantifying areas at risk.
Cole G. Brachmann, Tage Vowles, Riikka Rinnan, Mats P. Björkman, Anna Ekberg, and Robert G. Björk
Biogeosciences, 20, 4069–4086, https://doi.org/10.5194/bg-20-4069-2023, https://doi.org/10.5194/bg-20-4069-2023, 2023
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Herbivores change plant communities through grazing, altering the amount of CO2 and plant-specific chemicals (termed VOCs) emitted. We tested this effect by excluding herbivores and studying the CO2 and VOC emissions. Herbivores reduced CO2 emissions from a meadow community and altered VOC composition; however, community type had the strongest effect on the amount of CO2 and VOCs released. Herbivores can mediate greenhouse gas emissions, but the effect is marginal and community dependent.
Ole Lessmann, Jorge Encinas Fernández, Karla Martínez-Cruz, and Frank Peeters
Biogeosciences, 20, 4057–4068, https://doi.org/10.5194/bg-20-4057-2023, https://doi.org/10.5194/bg-20-4057-2023, 2023
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Based on a large dataset of seasonally resolved methane (CH4) pore water concentrations in a reservoir's sediment, we assess the significance of CH4 emissions due to reservoir flushing. In the studied reservoir, CH4 emissions caused by one flushing operation can represent 7 %–14 % of the annual CH4 emissions and depend on the timing of the flushing operation. In reservoirs with high sediment loadings, regular flushing may substantially contribute to the overall CH4 emissions.
Matti Räsänen, Risto Vesala, Petri Rönnholm, Laura Arppe, Petra Manninen, Markus Jylhä, Jouko Rikkinen, Petri Pellikka, and Janne Rinne
Biogeosciences, 20, 4029–4042, https://doi.org/10.5194/bg-20-4029-2023, https://doi.org/10.5194/bg-20-4029-2023, 2023
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Fungus-growing termites recycle large parts of dead plant material in African savannas and are significant sources of greenhouse gases. We measured CO2 and CH4 fluxes from their mounds and surrounding soils in open and closed habitats. The fluxes scale with mound volume. The results show that emissions from mounds of fungus-growing termites are more stable than those from other termites. The soil fluxes around the mound are affected by the termite colonies at up to 2 m distance from the mound.
Tim René de Groot, Anne Margriet Mol, Katherine Mesdag, Pierre Ramond, Rachel Ndhlovu, Julia Catherine Engelmann, Thomas Röckmann, and Helge Niemann
Biogeosciences, 20, 3857–3872, https://doi.org/10.5194/bg-20-3857-2023, https://doi.org/10.5194/bg-20-3857-2023, 2023
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This study investigates methane dynamics in the Wadden Sea. Our measurements revealed distinct variations triggered by seasonality and tidal forcing. The methane budget was higher in warmer seasons but surprisingly high in colder seasons. Methane dynamics were amplified during low tides, flushing the majority of methane into the North Sea or releasing it to the atmosphere. Methanotrophic activity was also elevated during low tide but mitigated only a small fraction of the methane efflux.
Cited articles
Abdalla, M., Hastings, A., Truu, J., Espenberg, M., Mander, Ü., and
Smith, P.: Emissions of methane from northern peatlands: a review of
management impacts and implications for future management options, Ecol.
Evol., 6, 7080–7102, https://doi.org/10.1002/ECE3.2469, 2016.
IPCC: AR6 Climate Change 2021: The Physical Science Basis – IPCC:
https://www.ipcc.ch/report/sixth-assessment-report-working-group-i/, last
access: 7 October 2022.
Aubinet, M., Vesala, T., and Papale, D.: Eddy Covariance: A Practical Guide
to Measurement and Data Analysis, Springer Atmospheric Sciences, 1, 438 pp.,
https://doi.org/10.1007/978-94-007-2351-1, 2012.
Atkin, O. K., Evans, J. R., Ball, M. C., Lambers, H., and Pons, T. L.: Leaf
Respiration of Snow Gum in the Light and Dark. Interactions between
Temperature and Irradiance, Plant Physiol., 122, 915–924,
https://doi.org/10.1104/PP.122.3.915, 2000.
Baird, A. J., Belyea, L. R., and Morris, P. J.: Upscaling of
Peatland-Atmosphere Fluxes of Methane: Small-Scale Heterogeneity in Process
Rates and the Pitfalls of “Bucket-and-Slab” Models, Carbon Cycling in
Northern Peatlands, American Geophysical Union, 37–53, https://doi.org/10.1029/2008GM000826, 2013.
Barbour, M. M., Mcdowell, N. G., Tcherkez, G., Bickford, C. P., and Hanson,
D. T.: A new measurement technique reveals rapid post-illumination changes
in the carbon isotope composition of leaf-respired CO2, Plant Cell Environ.,
30, 469–482, https://doi.org/10.1111/J.1365-3040.2007.01634.X, 2007.
Barret, M., Gandois, L., Thalasso, F., Martinez-Cruz, K.,
Sepulveda-Jauregui, A., Lavergne, C., Teisserenc, R., Aguilar-Muñoz, P.,
Gerardo-Nieto, O., Etchebehere, C., Dellagnezze, B., Bovio-Winkler, P.,
Fochesatto, G., Tananaev, N., Svenning, M. M., Seppey, C., Tveit, A., Chamy,
R., Astorga-España, M. S., Mansilla, A. O., van de Putte, A., Sweetlove,
M., and Murray, A. E.: A combined microbial and biogeochemical dataset from
high-latitude ecosystems with respect to methane cycle, Sci. Data, 9,
674, https://doi.org/10.1038/s41597-022-01759-8, 2022.
Bracho, R. and Jose, J. J. S.: Energy Fluxes in a Morichal (Swamp Palm
Community) at the Orinoco Llanos, Venezuela – Microclimate, Water-Vapor and
CO2 Exchange, Photosynthetica, 24, 468–494, 1990.
Capooci, M. and Vargas, R.: Trace gas fluxes from tidal salt marsh soils:
implications for carbon-sulfur biogeochemistry, Biogeosciences, 19,
4655–4670, https://doi.org/10.5194/bg-19-4655-2022, 2022.
Christiansen, J. R., Korhonen, J. F. J., Juszczak, R., Giebels, M., and
Pihlatie, M.: Assessing the effects of chamber placement, manual sampling
and headspace mixing on CH4 fluxes in a laboratory experiment, Plant
Soil, 343, 171–185, https://doi.org/10.1007/S11104-010-0701-Y,
2011.
Cobb, A. R., Hoyt, A. M., Gandois, L., Eri, J., Dommain, R., Salim, K. A.,
Kai, F. M., Su'ut, N. S. H., and Harvey, C. F.: How temporal patterns in
rainfall determine the geomorphology and carbon fluxes of tropical
peatlands, P. Natl. Acad. Sci. USA, 114,
E5187–E5196, https://doi.org/10.1073/pnas.1701090114, 2017.
Ding, W., Cai, Z., and Tsuruta, H.: Diel variation in methane emissions from
the stands of Carex lasiocarpa and Deyeuxia angustifolia in a cool temperate
freshwater marsh, Atmos. Environ., 38, 181–188,
https://doi.org/10.1016/J.ATMOSENV.2003.09.066, 2004.
Edwards, N. T. and Sollins, P.: Continuous Measurement of Carbon Dioxide
Evolution From Partitioned Forest Floor Components, Ecology, 54, 406–412,
https://doi.org/10.2307/1934349, 1973.
Fritz, C., Pancotto, V. A., Elzenga, J. T. M., Visser, E. J. W., Grootjans,
A. P., Pol, A., Iturraspe, R., Roelofs, J. G. M., and Smolders, A. J. P.:
Zero methane emission bogs: extreme rhizosphere oxygenation by cushion
plants in Patagonia, New Phytol., 190, 398–408,
https://doi.org/10.1111/J.1469-8137.2010.03604.X, 2011.
Frolking, S., Talbot, J., Jones, M. C., Treat, C. C., Kauffman, J. B.,
Tuittila, E. S., and Roulet, N.: Peatlands in the Earth's 21st century
climate system, Environ. Rev., 19, 371–396,
https://doi.org/10.1139/A11-014, 2011.
Griscom, B. W., Adams, J., Ellis, P. W., Houghton, R. A., Lomax, G., Miteva,
D. A., Schlesinger, W. H., Shoch, D., Siikamäki, J. v., Smith, P.,
Woodbury, P., Zganjar, C., Blackman, A., Campari, J., Conant, R. T.,
Delgado, C., Elias, P., Gopalakrishna, T., Hamsik, M. R., Herrero, M.,
Kiesecker, J., Landis, E., Laestadius, L., Leavitt, S. M., Minnemeyer, S.,
Polasky, S., Potapov, P., Putz, F. E., Sanderman, J., Silvius, M.,
Wollenberg, E., and Fargione, J.: Natural climate solutions, P.
Natl. Acad. Sci. USA, 114, 11645–11650,
https://doi.org/10.1073/pnas.1710465114, 2017.
Günther, A. B., Huth, V., Jurasinski, G., and Glatzel, S.:
Scale-Dependent Temporal Variation in Determining the Methane Balance of a
Temperate Fen, Greenh. Gas Meas. Manag., 4, 41–48,
https://doi.org/10.1080/20430779.2013.850395, 2014
Günther, A., Barthelmes, A., Huth, V., Joosten, H., Jurasinski, G.,
Koebsch, F., and Couwenberg, J.: Prompt rewetting of drained peatlands
reduces climate warming despite methane emissions, Nat. Commun.,
11, 1–5, https://doi.org/10.1038/s41467-020-15499-z, 2020.
Heusser, C. J.: Late Quaternary Vegetation and Climate of Southern Tierra
del Fuego. Late Quaternary vegetation and climate of southern Tierra del
Fuego, Quaternary Res., 31, 396–406,
https://doi.org/10.1016/0033-5894(89)90047-1, 1989.
Hoyos-Santillan, J., Lomax, B. H., Large, D., Turner, B. L., Lopez, O. R.,
Boom, A., Sepulveda-Jauregui, A., and Sjögersten, S.: Evaluation of
vegetation communities, water table, and peat composition as drivers of
greenhouse gas emissions in lowland tropical peatlands, Sci. Total
Environ., 688, 1193–1204,
https://doi.org/10.1016/J.SCITOTENV.2019.06.366, 2019.
Ilyasov, D. V., Meshcheryakova, A. V., Glagolev, M. V., Kupriianova, I. V.,
Kaverin, A. A., Sabrekov, A. F., Kulyabin, M. F., and Lapshina, E. D.:
Field-Layer Vegetation and Water Table Level as a Proxy of CO2 Exchange in
the West Siberian Boreal Bog, Land, 12, 566,
https://doi.org/10.3390/LAND12030566, 2023.
Järveoja, J., Nilsson, M. B., Gažovič, M., Crill, P. M., and
Peichl, M.: Partitioning of the net CO2 exchange using an automated chamber
system reveals plant phenology as key control of production and respiration
fluxes in a boreal peatland, Glob. Change Biol., 24, 3436–3451,
https://doi.org/10.1111/GCB.14292, 2018.
Järveoja, J., Nilsson, M. B., Crill, P. M., and Peichl, M.: Bimodal diel
pattern in peatland ecosystem respiration rebuts uniform temperature
response, Nat. Commun., 11, 1–9,
https://doi.org/10.1038/s41467-020-18027-1, 2020.
Juszczak, R.: Biases in Methane Chamber Measurements in Peatlands,
Int. Agrophys., 27, 159–168,
https://doi.org/10.2478/V10247-012-0081-Z, 2013.
Kutzbach, L., Schneider, J., Sachs, T., Giebels, M., Nykänen, H.,
Shurpali, N. J., Martikainen, P. J., Alm, J., and Wilmking, M.: CO2 flux
determination by closed-chamber methods can be seriously biased by
inappropriate application of linear regression, Biogeosciences, 4,
1005–1025, https://doi.org/10.5194/bg-4-1005-2007, 2007.
Lai, D. Y. F., Roulet, N. T., Humphreys, E. R., Moore, T. R., and Dalva, M.:
The effect of atmospheric turbulence and chamber deployment period on
autochamber CO2 and CH4 flux measurements in an ombrotrophic peatland,
Biogeosciences, 9, 3305–3322, https://doi.org/10.5194/bg-9-3305-2012, 2012.
Lawson, I. T., Kelly, T. J., Aplin, P., Boom, A., Dargie, G., Draper, F. C.
H., Hassan, P. N. Z. B. P., Hoyos-Santillan, J., Kaduk, J., Large, D.,
Murphy, W., Page, S. E., Roucoux, K. H., Sjögersten, S., Tansey, K.,
Waldram, M., Wedeux, B. M. M., and Wheeler, J.: Improving estimates of
tropical peatland area, carbon storage, and greenhouse gas fluxes, Wetlands
Ecol. Manag., 23, 327–346,
https://doi.org/10.1007/S11273-014-9402-2, 2014.
Lehmann, J. R. K., Münchberger, W., Knoth, C., Blodau, C., Nieberding,
F., Prinz, T., Pancotto, V. A., and Kleinebecker, T.: High-Resolution
Classification of South Patagonian Peat Bog Microforms Reveals Potential
Gaps in Up-Scaled CH4 Fluxes by use of Unmanned Aerial System (UAS) and CIR
Imagery, Remote Sens., 8, 173,
https://doi.org/10.3390/RS8030173, 2016.
Leifeld, J. and Menichetti, L.: The underappreciated potential of peatlands
in global climate change mitigation strategies, Nat. Commun.,
9, 1–7, https://doi.org/10.1038/s41467-018-03406-6, 2018.
Levenspiel, O.: Chemical Reaction Engineering, 3rd Edn., edited by: Anderson, W.,
Hepburn, K., and Santor, K., Times Roman by Bi-Comp Inc, John Wiley & Sons, 4140–4143, ISBN: 0-471-25424-X, 1999.
Limpert, K. E., Carnell, P. E., Trevathan-Tackett, S. M., and Macreadie, P.
I.: Reducing Emissions From Degraded Floodplain Wetlands, Front.
Environ. Sci., 8, 8,
https://doi.org/10.3389/fenvs.2020.00008, 2020.
Livingston, G. and Hutchinson, J.: Enclosure-Based Measurement of Trace Gas
Exchange: Applications and Sources of Error, in: Biogenic trace gases:
measuring emissions from soil and water, edited by: Matson, P. and Harris, R., R.C.,
Oxford, UK, Blackwell Science Ltd., 14–51, ISBN: 0-632-03641-9, 1995.
Masarovičova, E.: Relationships between the CO2 compensation
concentration, the slope of CO2 curves of net photosynthetic rate and the
energy of irradiance, Biol. Plantarum, 21, 434–439,
https://doi.org/10.1007/BF02889485, 2008.
Münchberger, W., Knorr, K. H., Blodau, C., Pancotto, V. A., and
Kleinebecker, T.: Zero to moderate methane emissions in a densely rooted,
pristine Patagonian bog – Biogeochemical controls as revealed from isotopic
evidence, Biogeosciences, 16, 541–559,
https://doi.org/10.5194/bg-16-541-2019, 2019.
Page, S., Mishra, S., Agus, F., Anshari, G., Dargie, G., Evers, S.,
Jauhiainen, J., Jaya, A., Jovani-Sancho, A. J., Laurén, A.,
Sjögersten, S., Suspense, I. A., Wijedasa, L. S., and Evans, C. D.:
Anthropogenic impacts on lowland tropical peatland biogeochemistry, Nat.
Rev. Earth Environ., 3, 426–443,
https://doi.org/10.1038/s43017-022-00289-6, 2022.
Pancotto, V., Holl, D., Escobar, J., Castagnani, M. F., and Kutzbach, L.:
Cushion bog plant community responses to passive warming in southern
Patagonia, Biogeosciences, 18, 4817–4839,
https://doi.org/10.5194/bg-18-4817-2021, 2021.
Pavelka, M., Acosta, M., Kiese, R., Altimir, N., Brümmer, C., Crill, P.,
Darenova, E., Fu., Gielen, B., Graf, A., Klemedtsson, L., Lohila, A.,
Longdoz, B., Lindroth, A., Nilsson, M., Maranón Jiménez, S.,
Merbold, L., Montagnani, L., Peichl, M., Pumpanen, J., Serrano Ortiz, P.,
Silvennoinen, H., Skiba, U., Vestin, P., Weslien, P., Janous, D., and
Kutsch, W.: Standardisation of chamber technique for CO2, N2O and CH4 fluxes
measurements from terrestrial ecosystems, Int. Agrophys., 32,
569–587, https://doi.org/10.1515/intag-2017-0045, 2018.
Pirk, N., Mastepanov, M., Parmentier, F.-J. W., Lund, M., Crill, P., and Christensen, T. R.: Calculations of automatic chamber flux measurements of methane and carbon dioxide using short time series of concentrations, Biogeosciences, 13, 903–912, https://doi.org/10.5194/bg-13-903-2016, 2016.
Ribeiro, K., Pacheco, F. S., Ferreira, J. W., de Sousa-Neto, E. R., Hastie,
A., Krieger Filho, G. C., Alvalá, P. C., Forti, M. C., and Ometto, J.
P.: Tropical peatlands and their contribution to the global carbon cycle and
climate change, Glob. Change Biol., 27, 489–505,
https://doi.org/10.1111/GCB.15408, 2021.
Rankin, T. E., Roulet, N. T., and Moore, T. R.: Controls on autotrophic and
heterotrophic respiration in an ombrotrophic bog, Biogeosciences, 19,
3285–3303, https://doi.org/10.5194/bg-19-3285-2022, 2022.
Rozzi, R., Armesto, J. J., Gutiérrez, J., Massardo, F., Likens, G.,
Anderson, C. B., Poole, A., Moses, K., Hargrove, G., Mansilla, A., Kennedy,
J.H., Willson, M., Jax, K., Jones, C., Callicott, J. B., and Kalin, M. T.:
Integrating ecology and environmental ethics: Earth stewardship in the
southern end of the Americas, BioScience, 62, 226–236
https://doi.org/10.1525/bio.2012.62.3.4, 2012.
Rozzi, R., Massardo, F., Anderson, C. B., Kurt Heidinger, J. A., and
Silander, J.: Ten Principles for biocultural conservation at the southern
tip of the Americas: The approach of the Omora Ethnobotanical Park, Ecol. Soc., 11, 43, https://www.jstor.org/stable/26267796 (last access: 27 November 2022), 2006.
Schindelin, J., Arganda-Carreras, I., Frise, E., Kaynig, V., Longair, M.,
Pietzsch, T., Preibisch, S., Rueden, C., Saalfeld, S., Schmid, B., Tinevez,
J. Y., White, D. J., Hartenstein, V., Eliceiri, K., Tomancak, P., and
Cardona, A.: Fiji: an open-source platform for biological-image analysis,
Nat. Method., 9, 676–682, https://doi.org/10.1038/nmeth.2019,
2012.
Shaver, G. R., Street, L. E., Rastetter, E. B., Van Wijk, M. T., and
Williams, M.: Functional convergence in regulation of net CO2 flux in
heterogeneous tundra landscapes in Alaska and Sweden, J. Ecol.,
95, 802–817, https://doi.org/10.1111/J.1365-2745.2007.01259.X, 2007.
Swails, E., Hergoualc'h, K., Verchot, L., Novita, N., and Lawrence, D.:
Spatio-Temporal Variability of Peat CH4 and N2O Fluxes and Their
Contribution to Peat GHG Budgets in Indonesian Forests and Oil Palm
Plantations, Front. Environ. Sci., 9, 617828,
https://doi.org/10.3389/fenvs.2021.617828, 2021.
UNEP (United Nations Environment Programme): Resolution 4/16. Conservation
and Sustainable Management of Peatlands – Resolution Adopted by the United
Nations Environment Assembly on 15 March 2019,
https://wedocs.unep.org/20.500.11822/30675 (last access: 7 December 2022), 2019.
Virkkala, A. M., Natali, S. M., Rogers, B. M., Watts, J. D., Savage, K.,
Connon, S. J., Mauritz, M., Schuur, E. A. G., Peter, D., Minions, C.,
Nojeim, J., Commane, R., Emmerton, C. A., Goeckede, M., Helbig, M., Holl,
D., Iwata, H., Kobayashi, H., Kolari, P., López-Blanco, E., Marushchak,
M. E., Mastepanov, M., Merbold, L., Parmentier, F. J. W., Peichl, M., Sachs,
T., Sonnentag, O., Ueyama, M., Voigt, C., Aurela, M., Boike, J., Celis, G.,
Chae, N., Christensen, T. R., Bret-Harte, M. S., Dengel, S., Dolman, H.,
Edgar, C. W., Elberling, B., Euskirchen, E., Grelle, A., Hatakka, J.,
Humphreys, E., Järveoja, J., Kotani, A., Kutzbach, L., Laurila, T.,
Lohila, A., Mammarella, I., Matsuura, Y., Meyer, G., Nilsson, M. B.,
Oberbauer, S. F., Park, S. J., Petrov, R., Prokushkin, A. S., Schulze, C.,
St. Louis, V. L., Tuittila, E. S., Tuovinen, J. P., Quinton, W., Varlagin,
A., Zona, D., and Zyryanov, V. I.: The ABCflux database: Arctic-boreal
CO2 flux observations and ancillary information aggregated to monthly time
steps across terrestrial ecosystems, Earth Syst. Sci. Data, 14, 179–208,
https://doi.org/10.5194/ESSD-14-179-2022, 2022.
Werner, R. A., Buchmann, N., Siegwolf, R. T. W., Kornexl, B. E., and
Gessler, A.: Metabolic fluxes, carbon isotope fractionation and respiration
– lessons to be learned from plant biochemistry, New Phytol., 191,
10–15, https://doi.org/10.1111/J.1469-8137.2011.03741.X, 2011.
Wright, E. L., Black, C. R., Turner, B. L., and Sjögersten, S.:
Environmental controls of temporal and spatial variability in CO2 and CH4
fluxes in a neotropical peatland, Glob. Change Biol., 19, 3775–3789,
https://doi.org/10.1111/GCB.12330, 2013.
Yu, Z., Beilman, D. W., Frolking, S., MacDonald, G. M., Roulet, N. T.,
Camill, P., and Charman, D. J.: Peatlands and Their Role in the Global
Carbon Cycle, Eos, 92, 97–98, https://doi.org/10.1029/2011EO120001, 2011.
Short summary
A robust skirt-chamber design to capture and quantify greenhouse gas emissions from peatlands is presented. Compared to standard methods, this design improves the spatial resolution of field studies in remote locations while minimizing intrusion.
A robust skirt-chamber design to capture and quantify greenhouse gas emissions from peatlands is...
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