Articles | Volume 22, issue 12
https://doi.org/10.5194/bg-22-2871-2025
© Author(s) 2025. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/bg-22-2871-2025
© Author(s) 2025. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Research article
| 
20 Jun 2025
Research article |
| 20 Jun 2025
| 20 Jun 2025
Organic carbon, mercury, and sediment characteristics along a land–shore transect in Arctic Alaska
Frieda P. Giest
Alfred Wegener Institute Helmholtz Centre for Polar and Marine Research, Permafrost Research Section, 14473 Potsdam, Germany
Institute of Environmental Science and Geography, University of Potsdam, 14467 Potsdam, Germany
Alfred Wegener Institute Helmholtz Centre for Polar and Marine Research, Permafrost Research Section, 14473 Potsdam, Germany
Institute of Geosciences, University of Potsdam, 14467 Potsdam, Germany
Guido Grosse
Alfred Wegener Institute Helmholtz Centre for Polar and Marine Research, Permafrost Research Section, 14473 Potsdam, Germany
Institute of Geosciences, University of Potsdam, 14467 Potsdam, Germany
Benjamin M. Jones
Institute of Northern Engineering, University of Alaska Fairbanks, Fairbanks, Alaska 99775, USA
Kai Mangelsdorf
GFZ Helmholtz Centre for Geosciences, Organic Geochemistry Section, 14473 Potsdam, Germany
Torben Windirsch
Alfred Wegener Institute Helmholtz Centre for Polar and Marine Research, Permafrost Research Section, 14473 Potsdam, Germany
now at: Research Institute for Sustainability at GFZ, 14467 Potsdam, Germany
Alfred Wegener Institute Helmholtz Centre for Polar and Marine Research, Permafrost Research Section, 14473 Potsdam, Germany
Related authors
No articles found.
Lutz Schirrmeister, Margret C. Fuchs, Thomas Opel, Andrei Andreev, Frank Kienast, Andrea Schneider, Larisa Nazarova, Larisa Frolova, Svetlana Kuzmina, Tatiana Kuznetsova, Vladimir Tumskoy, Heidrun Matthes, Gerrit Lohmann, Guido Grosse, Viktor Kunitsky, Hanno Meyer, Heike H. Zimmermann, Ulrike Herzschuh, Thomas Böhmer, Stuart Umbo, Sevi Modestou, Sebastian F. M. Breitenbach, Anfisa Pismeniuk, Georg Schwamborn, Stephanie Kusch, and Sebastian Wetterich
Clim. Past, 21, 1143–1184, https://doi.org/10.5194/cp-21-1143-2025, https://doi.org/10.5194/cp-21-1143-2025, 2025
Short summary
Short summary
Geochronological, cryolithological, paleoecological, and modeling data reconstruct the Last Interglacial (LIG) climate around the New Siberian Islands and reveal significantly warmer conditions compared to today. The critical challenges in predicting future ecosystem responses lie in the fact that the land–ocean distribution during the LIG was markedly different from today, affecting the degree of continentality, which played a major role in modulating climate and ecosystem dynamics.
Constanze Reinken, Victor Brovkin, Philipp de Vrese, Ingmar Nitze, Helena Bergstedt, and Guido Grosse
EGUsphere, https://doi.org/10.5194/egusphere-2025-1817, https://doi.org/10.5194/egusphere-2025-1817, 2025
This preprint is open for discussion and under review for The Cryosphere (TC).
Short summary
Short summary
Thermokarst lakes are dynamic features of ice-rich permafrost landscapes, altering energy, water and carbon cycles, but have so far mostly been modeled on site-level scale. A deterministic modelling approach would be challenging on larger scales due to the lack of extensive high-resolution data of sub-surface conditions. We therefore develop a conceptual stochastic model of thermokarst lake dynamics that treats the involved processes as probabilistic.
Mélissa Laurent, Mackenzie R. Baysinger, Jörg Schaller, Matthias Lück, Mathias Hoffmann, Torben Windirsch, Ruth H. Ellerbrock, Jens Strauss, and Claire C. Treat
EGUsphere, https://doi.org/10.5194/egusphere-2025-1792, https://doi.org/10.5194/egusphere-2025-1792, 2025
This preprint is open for discussion and under review for Biogeosciences (BG).
Short summary
Short summary
Palsas are peat permafrost mounds underlain by ice-rich permafrost. Due to climate change, they could disappeare by the end of the century. When palsas thaw, changes occur in hydrological conditions affecting the carbon (C) cycle. In our study, we simulated permafrost thaw under different water treatments using 1-meter soil columns from a palsa. We measured CH4 and CO2 emissions for 3-month incubation. Our results show that following thaw, flooding the cores leads to increased CO2 emissions.
Amelie Stieg, Boris K. Biskaborn, Ulrike Herzschuh, Andreas Marent, Jens Strauss, Dorothee Wilhelms-Dick, Luidmila A. Pestryakova, and Hanno Meyer
Biogeosciences, 22, 2327–2350, https://doi.org/10.5194/bg-22-2327-2025, https://doi.org/10.5194/bg-22-2327-2025, 2025
Short summary
Short summary
Globally, lake ecosystems have undergone significant shifts since the 1950s due to human activities. This study presents a unique ~220-year sediment record from a remote Siberian boreal lake, providing a multiproxy perspective on climate warming and anthropogenic air pollution. Analyses of diatom assemblages, diatom silicon isotopes, and carbon and nitrogen sediment proxies reveal complex biogeochemical interactions, highlighting anthropogenic influences even on remote water resources.
Nina Nesterova, Ilia Tarasevich, Marina Leibman, Artem Khomutov, Alexander Kizyakov, Ingmar Nitze, and Guido Grosse
Earth Syst. Sci. Data Discuss., https://doi.org/10.5194/essd-2025-164, https://doi.org/10.5194/essd-2025-164, 2025
Preprint under review for ESSD
Short summary
Short summary
We created the first detailed map of retrogressive thaw slump (RTS) landforms across a large area of the West Siberian Arctic. RTSs are key features of abrupt permafrost thaw accelerated by climate change. Using satellite images and field data, we identified and classified over 6000 RTSs. This dataset helps scientists better understand how warming is changing Arctic landscapes and provides a trusted reference for training artificial intelligence to detect these landforms in the future.
Simeon Lisovski, Alexandra Runge, Iuliia Shevtsova, Nele Landgraf, Anne Morgenstern, Ronald Reagan Okoth, Matthias Fuchs, Nikolay Lashchinskiy, Carl Stadie, Alison Beamish, Ulrike Herzschuh, Guido Grosse, and Birgit Heim
Earth Syst. Sci. Data, 17, 1707–1730, https://doi.org/10.5194/essd-17-1707-2025, https://doi.org/10.5194/essd-17-1707-2025, 2025
Short summary
Short summary
The Lena Delta is the largest river delta in the Arctic and represents a biodiversity hotspot. Here, we describe multiple field datasets and a detailed habitat classification map for the Lena Delta. We present context and methods of these openly available datasets and show how they can improve our understanding of the rapidly changing Arctic tundra system.
Maren Jenrich, Juliane Wolter, Susanne Liebner, Christian Knoblauch, Guido Grosse, Fiona Giebeler, Dustin Whalen, and Jens Strauss
Biogeosciences, 22, 2069–2086, https://doi.org/10.5194/bg-22-2069-2025, https://doi.org/10.5194/bg-22-2069-2025, 2025
Short summary
Short summary
Climate warming in the Arctic is causing the erosion of permafrost coasts and the transformation of permafrost lakes into lagoons. To understand how this affects greenhouse gas (GHG) emissions, we studied carbon dioxide (CO₂) and methane (CH₄) production in lagoons with varying sea connections. Younger lagoons produce more CH₄, while CO₂ increases under more marine conditions. Flooding of permafrost lowlands due to rising sea levels may lead to higher GHG emissions from Arctic coasts in future.
Tabea Rettelbach, Ingmar Nitze, Inge Grünberg, Jennika Hammar, Simon Schäffler, Daniel Hein, Matthias Gessner, Tilman Bucher, Jörg Brauchle, Jörg Hartmann, Torsten Sachs, Julia Boike, and Guido Grosse
Earth Syst. Sci. Data, 16, 5767–5798, https://doi.org/10.5194/essd-16-5767-2024, https://doi.org/10.5194/essd-16-5767-2024, 2024
Short summary
Short summary
Permafrost landscapes in the Arctic are rapidly changing due to climate warming. Here, we publish aerial images and elevation models with very high spatial detail that help study these landscapes in northwestern Canada and Alaska. The images were collected using the Modular Aerial Camera System (MACS). This dataset has significant implications for understanding permafrost landscape dynamics in response to climate change. It is publicly available for further research.
Noriaki Ohara, Andrew D. Parsekian, Benjamin M. Jones, Rodrigo C. Rangel, Kenneth M. Hinkel, and Rui A. P. Perdigão
The Cryosphere, 18, 5139–5152, https://doi.org/10.5194/tc-18-5139-2024, https://doi.org/10.5194/tc-18-5139-2024, 2024
Short summary
Short summary
Snow distribution characterization is essential for accurate snow water estimation for water resource prediction from existing in situ observations and remote-sensing data at a finite spatial resolution. Four different observed snow distribution datasets were analyzed for Gaussianity. We found that non-Gaussianity of snow distribution is a signature of the wind redistribution effect. Generally, seasonal snowpack can be approximated well by a Gaussian distribution for a fully snow-covered area.
Lydia Stolpmann, Ingmar Nitze, Ingeborg Bussmann, Benjamin M. Jones, Josefine Lenz, Hanno Meyer, Juliane Wolter, and Guido Grosse
EGUsphere, https://doi.org/10.5194/egusphere-2024-2822, https://doi.org/10.5194/egusphere-2024-2822, 2024
Preprint archived
Short summary
Short summary
We combine hydrochemical and lake change data to show consequences of permafrost thaw induced lake changes on hydrochemistry, which are relevant for the global carbon cycle. We found higher methane concentrations in lakes that do not freeze to the ground and show that lagoons have lower methane concentrations than lakes. Our detailed lake sampling approach show higher concentrations in Dissolved Organic Carbon in areas of higher erosion rates, that might increase under the climate warming.
Nina Nesterova, Marina Leibman, Alexander Kizyakov, Hugues Lantuit, Ilya Tarasevich, Ingmar Nitze, Alexandra Veremeeva, and Guido Grosse
The Cryosphere, 18, 4787–4810, https://doi.org/10.5194/tc-18-4787-2024, https://doi.org/10.5194/tc-18-4787-2024, 2024
Short summary
Short summary
Retrogressive thaw slumps (RTSs) are widespread in the Arctic permafrost landforms. RTSs present a big interest for researchers because of their expansion due to climate change. There are currently different scientific schools and terminology used in the literature on this topic. We have critically reviewed existing concepts and terminology and provided clarifications to present a useful base for experts in the field and ease the introduction to the topic for scientists who are new to it.
Soraya Kaiser, Julia Boike, Guido Grosse, and Moritz Langer
Earth Syst. Sci. Data, 16, 3719–3753, https://doi.org/10.5194/essd-16-3719-2024, https://doi.org/10.5194/essd-16-3719-2024, 2024
Short summary
Short summary
Arctic warming, leading to permafrost degradation, poses primary threats to infrastructure and secondary ecological hazards from possible infrastructure failure. Our study created a comprehensive Alaska inventory combining various data sources with which we improved infrastructure classification and data on contaminated sites. This resource is presented as a GeoPackage allowing planning of infrastructure damage and possible implications for Arctic communities facing permafrost challenges.
Amelie Stieg, Boris K. Biskaborn, Ulrike Herzschuh, Jens Strauss, Luidmila Pestryakova, and Hanno Meyer
Clim. Past, 20, 909–933, https://doi.org/10.5194/cp-20-909-2024, https://doi.org/10.5194/cp-20-909-2024, 2024
Short summary
Short summary
Siberia is impacted by recent climate warming and experiences extreme hydroclimate events. We present a 220-year-long sub-decadal stable oxygen isotope record of diatoms from Lake Khamra. Our analysis identifies winter precipitation as the key process impacting the isotope variability. Two possible hydroclimatic anomalies were found to coincide with significant changes in lake internal conditions and increased wildfire activity in the region.
Boris K. Biskaborn, Amy Forster, Gregor Pfalz, Lyudmila A. Pestryakova, Kathleen Stoof-Leichsenring, Jens Strauss, Tim Kröger, and Ulrike Herzschuh
Biogeosciences, 20, 1691–1712, https://doi.org/10.5194/bg-20-1691-2023, https://doi.org/10.5194/bg-20-1691-2023, 2023
Short summary
Short summary
Lake sediment from the Russian Arctic was studied for microalgae and organic matter chemistry dated back to the last glacial 28 000 years. Species and chemistry responded to environmental changes such as the Younger Dryas cold event and the Holocene thermal maximum. Organic carbon accumulation correlated with rates of microalgae deposition only during warm episodes but not during the cold glacial.
Olga Ogneva, Gesine Mollenhauer, Bennet Juhls, Tina Sanders, Juri Palmtag, Matthias Fuchs, Hendrik Grotheer, Paul J. Mann, and Jens Strauss
Biogeosciences, 20, 1423–1441, https://doi.org/10.5194/bg-20-1423-2023, https://doi.org/10.5194/bg-20-1423-2023, 2023
Short summary
Short summary
Arctic warming accelerates permafrost thaw and release of terrestrial organic matter (OM) via rivers to the Arctic Ocean. We compared particulate organic carbon (POC), total suspended matter, and C isotopes (δ13C and Δ14C of POC) in the Lena delta and Lena River along a ~1600 km transect. We show that the Lena delta, as an interface between the Lena River and the Arctic Ocean, plays a crucial role in determining the qualitative and quantitative composition of OM discharged into the Arctic Ocean.
Peter Stimmler, Mathias Goeckede, Bo Elberling, Susan Natali, Peter Kuhry, Nia Perron, Fabrice Lacroix, Gustaf Hugelius, Oliver Sonnentag, Jens Strauss, Christina Minions, Michael Sommer, and Jörg Schaller
Earth Syst. Sci. Data, 15, 1059–1075, https://doi.org/10.5194/essd-15-1059-2023, https://doi.org/10.5194/essd-15-1059-2023, 2023
Short summary
Short summary
Arctic soils store large amounts of carbon and nutrients. The availability of nutrients, such as silicon, calcium, iron, aluminum, phosphorus, and amorphous silica, is crucial to understand future carbon fluxes in the Arctic. Here, we provide, for the first time, a unique dataset of the availability of the abovementioned nutrients for the different soil layers, including the currently frozen permafrost layer. We relate these data to several geographical and geological parameters.
Mauricio Arboleda-Zapata, Michael Angelopoulos, Pier Paul Overduin, Guido Grosse, Benjamin M. Jones, and Jens Tronicke
The Cryosphere, 16, 4423–4445, https://doi.org/10.5194/tc-16-4423-2022, https://doi.org/10.5194/tc-16-4423-2022, 2022
Short summary
Short summary
We demonstrate how we can reliably estimate the thawed–frozen permafrost interface with its associated uncertainties in subsea permafrost environments using 2D electrical resistivity tomography (ERT) data. In addition, we show how further analyses considering 1D inversion and sensitivity assessments can help quantify and better understand 2D ERT inversion results. Our results illustrate the capabilities of the ERT method to get insights into the development of the subsea permafrost.
Jason A. Clark, Elchin E. Jafarov, Ken D. Tape, Benjamin M. Jones, and Victor Stepanenko
Geosci. Model Dev., 15, 7421–7448, https://doi.org/10.5194/gmd-15-7421-2022, https://doi.org/10.5194/gmd-15-7421-2022, 2022
Short summary
Short summary
Lakes in the Arctic are important reservoirs of heat. Under climate warming scenarios, we expect Arctic lakes to warm the surrounding frozen ground. We simulate water temperatures in three Arctic lakes in northern Alaska over several years. Our results show that snow depth and lake ice strongly affect water temperatures during the frozen season and that more heat storage by lakes would enhance thawing of frozen ground.
Loeka L. Jongejans, Kai Mangelsdorf, Cornelia Karger, Thomas Opel, Sebastian Wetterich, Jérémy Courtin, Hanno Meyer, Alexander I. Kizyakov, Guido Grosse, Andrei G. Shepelev, Igor I. Syromyatnikov, Alexander N. Fedorov, and Jens Strauss
The Cryosphere, 16, 3601–3617, https://doi.org/10.5194/tc-16-3601-2022, https://doi.org/10.5194/tc-16-3601-2022, 2022
Short summary
Short summary
Large parts of Arctic Siberia are underlain by permafrost. Climate warming leads to permafrost thaw. At the Batagay megaslump, permafrost sediments up to ~ 650 kyr old are exposed. We took sediment samples and analysed the organic matter (e.g. plant remains). We found distinct differences in the biomarker distributions between the glacial and interglacial deposits with generally stronger microbial activity during interglacial periods. Further permafrost thaw enhances greenhouse gas emissions.
Jan Nitzbon, Damir Gadylyaev, Steffen Schlüter, John Maximilian Köhne, Guido Grosse, and Julia Boike
The Cryosphere, 16, 3507–3515, https://doi.org/10.5194/tc-16-3507-2022, https://doi.org/10.5194/tc-16-3507-2022, 2022
Short summary
Short summary
The microstructure of permafrost soils contains clues to its formation and its preconditioning to future change. We used X-ray computed tomography (CT) to measure the composition of a permafrost drill core from Siberia. By combining CT with laboratory measurements, we determined the the proportions of pore ice, excess ice, minerals, organic matter, and gas contained in the core at an unprecedented resolution. Our work demonstrates the potential of CT to study permafrost properties and processes.
M. R. Udawalpola, C. Witharana, A. Hasan, A. Liljedahl, M. Ward Jones, and B. Jones
Int. Arch. Photogramm. Remote Sens. Spatial Inf. Sci., XLVI-M-2-2022, 203–208, https://doi.org/10.5194/isprs-archives-XLVI-M-2-2022-203-2022, https://doi.org/10.5194/isprs-archives-XLVI-M-2-2022-203-2022, 2022
Matthias Fuchs, Juri Palmtag, Bennet Juhls, Pier Paul Overduin, Guido Grosse, Ahmed Abdelwahab, Michael Bedington, Tina Sanders, Olga Ogneva, Irina V. Fedorova, Nikita S. Zimov, Paul J. Mann, and Jens Strauss
Earth Syst. Sci. Data, 14, 2279–2301, https://doi.org/10.5194/essd-14-2279-2022, https://doi.org/10.5194/essd-14-2279-2022, 2022
Short summary
Short summary
We created digital, high-resolution bathymetry data sets for the Lena Delta and Kolyma Gulf regions in northeastern Siberia. Based on nautical charts, we digitized depth points and isobath lines, which serve as an input for a 50 m bathymetry model. The benefit of this data set is the accurate mapping of near-shore areas as well as the offshore continuation of the main deep river channels. This will improve the estimation of river outflow and the nutrient flux output into the coastal zone.
Charlotte Haugk, Loeka L. Jongejans, Kai Mangelsdorf, Matthias Fuchs, Olga Ogneva, Juri Palmtag, Gesine Mollenhauer, Paul J. Mann, P. Paul Overduin, Guido Grosse, Tina Sanders, Robyn E. Tuerena, Lutz Schirrmeister, Sebastian Wetterich, Alexander Kizyakov, Cornelia Karger, and Jens Strauss
Biogeosciences, 19, 2079–2094, https://doi.org/10.5194/bg-19-2079-2022, https://doi.org/10.5194/bg-19-2079-2022, 2022
Short summary
Short summary
Buried animal and plant remains (carbon) from the last ice age were freeze-locked in permafrost. At an extremely fast eroding permafrost cliff in the Lena Delta (Siberia), we found this formerly frozen carbon well preserved. Our results show that ongoing degradation releases substantial amounts of this carbon, making it available for future carbon emissions. This mobilisation at the studied cliff and also similarly eroding sites bear the potential to affect rivers and oceans negatively.
Noriaki Ohara, Benjamin M. Jones, Andrew D. Parsekian, Kenneth M. Hinkel, Katsu Yamatani, Mikhail Kanevskiy, Rodrigo C. Rangel, Amy L. Breen, and Helena Bergstedt
The Cryosphere, 16, 1247–1264, https://doi.org/10.5194/tc-16-1247-2022, https://doi.org/10.5194/tc-16-1247-2022, 2022
Short summary
Short summary
New variational principle suggests that a semi-ellipsoid talik shape (3D Stefan equation) is optimum for incoming energy. However, the lake bathymetry tends to be less ellipsoidal due to the ice-rich layers near the surface. Wind wave erosion is likely responsible for the elongation of lakes, while thaw subsidence slows the wave effect and stabilizes the thermokarst lakes. The derived 3D Stefan equation was compared to the field-observed talik thickness data using geophysical methods.
David Olefeldt, Mikael Hovemyr, McKenzie A. Kuhn, David Bastviken, Theodore J. Bohn, John Connolly, Patrick Crill, Eugénie S. Euskirchen, Sarah A. Finkelstein, Hélène Genet, Guido Grosse, Lorna I. Harris, Liam Heffernan, Manuel Helbig, Gustaf Hugelius, Ryan Hutchins, Sari Juutinen, Mark J. Lara, Avni Malhotra, Kristen Manies, A. David McGuire, Susan M. Natali, Jonathan A. O'Donnell, Frans-Jan W. Parmentier, Aleksi Räsänen, Christina Schädel, Oliver Sonnentag, Maria Strack, Suzanne E. Tank, Claire Treat, Ruth K. Varner, Tarmo Virtanen, Rebecca K. Warren, and Jennifer D. Watts
Earth Syst. Sci. Data, 13, 5127–5149, https://doi.org/10.5194/essd-13-5127-2021, https://doi.org/10.5194/essd-13-5127-2021, 2021
Short summary
Short summary
Wetlands, lakes, and rivers are important sources of the greenhouse gas methane to the atmosphere. To understand current and future methane emissions from northern regions, we need maps that show the extent and distribution of specific types of wetlands, lakes, and rivers. The Boreal–Arctic Wetland and Lake Dataset (BAWLD) provides maps of five wetland types, seven lake types, and three river types for northern regions and will improve our ability to predict future methane emissions.
Torben Windirsch, Guido Grosse, Mathias Ulrich, Bruce C. Forbes, Mathias Göckede, Juliane Wolter, Marc Macias-Fauria, Johan Olofsson, Nikita Zimov, and Jens Strauss
Biogeosciences Discuss., https://doi.org/10.5194/bg-2021-227, https://doi.org/10.5194/bg-2021-227, 2021
Revised manuscript not accepted
Short summary
Short summary
With global warming, permafrost thaw and associated carbon release are of increasing importance. We examined how large herbivorous animals affect Arctic landscapes and how they might contribute to reduction of these emissions. We show that over a short timespan of roughly 25 years, these animals have already changed the vegetation and landscape. On pastures in a permafrost area in Siberia we found smaller thaw depth and higher carbon content than in surrounding non-pasture areas.
Lydia Stolpmann, Caroline Coch, Anne Morgenstern, Julia Boike, Michael Fritz, Ulrike Herzschuh, Kathleen Stoof-Leichsenring, Yury Dvornikov, Birgit Heim, Josefine Lenz, Amy Larsen, Katey Walter Anthony, Benjamin Jones, Karen Frey, and Guido Grosse
Biogeosciences, 18, 3917–3936, https://doi.org/10.5194/bg-18-3917-2021, https://doi.org/10.5194/bg-18-3917-2021, 2021
Short summary
Short summary
Our new database summarizes DOC concentrations of 2167 water samples from 1833 lakes in permafrost regions across the Arctic to provide insights into linkages between DOC and environment. We found increasing lake DOC concentration with decreasing permafrost extent and higher DOC concentrations in boreal permafrost sites compared to tundra sites. Our study shows that DOC concentration depends on the environmental properties of a lake, especially permafrost extent, ecoregion, and vegetation.
Ines Spangenberg, Pier Paul Overduin, Ellen Damm, Ingeborg Bussmann, Hanno Meyer, Susanne Liebner, Michael Angelopoulos, Boris K. Biskaborn, Mikhail N. Grigoriev, and Guido Grosse
The Cryosphere, 15, 1607–1625, https://doi.org/10.5194/tc-15-1607-2021, https://doi.org/10.5194/tc-15-1607-2021, 2021
Short summary
Short summary
Thermokarst lakes are common on ice-rich permafrost. Many studies have shown that they are sources of methane to the atmosphere. Although they are usually covered by ice, little is known about what happens to methane in winter. We studied how much methane is contained in the ice of a thermokarst lake, a thermokarst lagoon and offshore. Methane concentrations differed strongly, depending on water body type. Microbes can also oxidize methane in ice and lower the concentrations during winter.
Claire E. Simpson, Christopher D. Arp, Yongwei Sheng, Mark L. Carroll, Benjamin M. Jones, and Laurence C. Smith
Earth Syst. Sci. Data, 13, 1135–1150, https://doi.org/10.5194/essd-13-1135-2021, https://doi.org/10.5194/essd-13-1135-2021, 2021
Short summary
Short summary
Sonar depth point measurements collected at 17 lakes on the Arctic Coastal Plain of Alaska are used to train and validate models to map lake bathymetry. These models predict depth from remotely sensed lake color and are able to explain 58.5–97.6 % of depth variability. To calculate water volumes, we integrate this modeled bathymetry with lake surface area. Knowledge of Alaskan lake bathymetries and volumes is crucial to better understanding water storage, energy balance, and ecological habitat.
Arthur Monhonval, Sophie Opfergelt, Elisabeth Mauclet, Benoît Pereira, Aubry Vandeuren, Guido Grosse, Lutz Schirrmeister, Matthias Fuchs, Peter Kuhry, and Jens Strauss
Earth Syst. Sci. Data Discuss., https://doi.org/10.5194/essd-2020-359, https://doi.org/10.5194/essd-2020-359, 2020
Preprint withdrawn
Short summary
Short summary
With global warming, ice-rich permafrost soils expose organic carbon to microbial degradation and unlock mineral elements as well. Interactions between mineral elements and organic carbon may enhance or mitigate microbial degradation. Here, we provide a large scale ice-rich permafrost mineral concentrations assessment and estimates of mineral element stocks in those deposits. Si is the most abundant mineral element and Fe and Al are present in the same order of magnitude as organic carbon.
Ingmar Nitze, Sarah W. Cooley, Claude R. Duguay, Benjamin M. Jones, and Guido Grosse
The Cryosphere, 14, 4279–4297, https://doi.org/10.5194/tc-14-4279-2020, https://doi.org/10.5194/tc-14-4279-2020, 2020
Short summary
Short summary
In summer 2018, northwestern Alaska was affected by widespread lake drainage which strongly exceeded previous observations. We analyzed the spatial and temporal patterns with remote sensing observations, weather data and lake-ice simulations. The preceding fall and winter season was the second warmest and wettest on record, causing the destabilization of permafrost and elevated water levels which likely led to widespread and rapid lake drainage during or right after ice breakup.
Torben Windirsch, Guido Grosse, Mathias Ulrich, Lutz Schirrmeister, Alexander N. Fedorov, Pavel Y. Konstantinov, Matthias Fuchs, Loeka L. Jongejans, Juliane Wolter, Thomas Opel, and Jens Strauss
Biogeosciences, 17, 3797–3814, https://doi.org/10.5194/bg-17-3797-2020, https://doi.org/10.5194/bg-17-3797-2020, 2020
Short summary
Short summary
To extend the knowledge on circumpolar deep permafrost carbon storage, we examined two deep permafrost deposit types (Yedoma and alas) in central Yakutia. We found little but partially undecomposed organic carbon as a result of largely changing sedimentation processes. The carbon stock of the examined Yedoma deposits is about 50 % lower than the general Yedoma domain mean, implying a very hetererogeneous Yedoma composition, while the alas is approximately 80 % below the thermokarst deposit mean.
Lutz Schirrmeister, Elisabeth Dietze, Heidrun Matthes, Guido Grosse, Jens Strauss, Sebastian Laboor, Mathias Ulrich, Frank Kienast, and Sebastian Wetterich
E&G Quaternary Sci. J., 69, 33–53, https://doi.org/10.5194/egqsj-69-33-2020, https://doi.org/10.5194/egqsj-69-33-2020, 2020
Short summary
Short summary
Late Pleistocene Yedoma deposits of Siberia and Alaska are prone to degradation with warming temperatures.
Multimodal grain-size distributions of >700 samples indicate varieties of sediment production, transport, and deposition.
These processes were disentangled using robust endmember modeling analysis.
Nine robust grain-size endmembers characterize these deposits.
The data set was finally classified using cluster analysis.
The polygenetic Yedoma origin is proved.
Loeka L. Jongejans, Jens Strauss, Josefine Lenz, Francien Peterse, Kai Mangelsdorf, Matthias Fuchs, and Guido Grosse
Biogeosciences, 15, 6033–6048, https://doi.org/10.5194/bg-15-6033-2018, https://doi.org/10.5194/bg-15-6033-2018, 2018
Short summary
Short summary
Arctic warming mobilizes belowground organic matter in northern high latitudes. This study focused on the size of organic carbon pools and organic matter quality in ice-rich permafrost on the Baldwin Peninsula, West Alaska. We analyzed biogeochemistry and found that three-quarters of the carbon is stored in degraded permafrost deposits. Nonetheless, using biomarker analyses, we showed that the organic matter in undisturbed yedoma permafrost has a higher potential for decomposition.
Matthias Fuchs, Guido Grosse, Jens Strauss, Frank Günther, Mikhail Grigoriev, Georgy M. Maximov, and Gustaf Hugelius
Biogeosciences, 15, 953–971, https://doi.org/10.5194/bg-15-953-2018, https://doi.org/10.5194/bg-15-953-2018, 2018
Short summary
Short summary
Our paper investigates soil organic carbon and nitrogen in permafrost soils on Sobo-Sise Island and Bykovsky Peninsula in the north of eastern Siberia. We collected and analysed permafrost soil cores and upscaled carbon and nitrogen stocks to landscape level. We found large amounts of carbon and nitrogen stored in these frozen soils, reconstructed sedimentation rates and estimated the potential increase in organic carbon availability if permafrost continues to thaw and active layer deepens.
Simon Zwieback, Steven V. Kokelj, Frank Günther, Julia Boike, Guido Grosse, and Irena Hajnsek
The Cryosphere, 12, 549–564, https://doi.org/10.5194/tc-12-549-2018, https://doi.org/10.5194/tc-12-549-2018, 2018
Short summary
Short summary
We analyse elevation losses at thaw slumps, at which icy sediments are exposed. As ice requires a large amount of energy to melt, one would expect that mass wasting is governed by the available energy. However, we observe very little mass wasting in June, despite the ample energy supply. Also, in summer, mass wasting is not always energy limited. This highlights the importance of other processes, such as the formation of a protective veneer, in shaping mass wasting at sub-seasonal scales.
Sina Muster, Kurt Roth, Moritz Langer, Stephan Lange, Fabio Cresto Aleina, Annett Bartsch, Anne Morgenstern, Guido Grosse, Benjamin Jones, A. Britta K. Sannel, Ylva Sjöberg, Frank Günther, Christian Andresen, Alexandra Veremeeva, Prajna R. Lindgren, Frédéric Bouchard, Mark J. Lara, Daniel Fortier, Simon Charbonneau, Tarmo A. Virtanen, Gustaf Hugelius, Juri Palmtag, Matthias B. Siewert, William J. Riley, Charles D. Koven, and Julia Boike
Earth Syst. Sci. Data, 9, 317–348, https://doi.org/10.5194/essd-9-317-2017, https://doi.org/10.5194/essd-9-317-2017, 2017
Short summary
Short summary
Waterbodies are abundant in Arctic permafrost lowlands. Most waterbodies are ponds with a surface area smaller than 100 x 100 m. The Permafrost Region Pond and Lake Database (PeRL) for the first time maps ponds as small as 10 x 10 m. PeRL maps can be used to document changes both by comparing them to historical and future imagery. The distribution of waterbodies in the Arctic is important to know in order to manage resources in the Arctic and to improve climate predictions in the Arctic.
Lutz Schirrmeister, Georg Schwamborn, Pier Paul Overduin, Jens Strauss, Margret C. Fuchs, Mikhail Grigoriev, Irina Yakshina, Janet Rethemeyer, Elisabeth Dietze, and Sebastian Wetterich
Biogeosciences, 14, 1261–1283, https://doi.org/10.5194/bg-14-1261-2017, https://doi.org/10.5194/bg-14-1261-2017, 2017
Short summary
Short summary
We investigate late Pleistocene permafrost at the Buor Khaya Peninsula (Laptev Sea, Siberia) for cryolithological, geochemical, and geochronological parameters. The sequences were composed of ice-oversaturated silts and fine-grained sands with 0.2 to 24 wt% of organic matter. The deposition was between 54.1 and 9.7 kyr BP. Due to coastal erosion, the biogeochemical signature of the deposits represents the terrestrial end-member, and is related to organic matter deposited in the marine realm.
Benjamin M. Jones, Carson A. Baughman, Vladimir E. Romanovsky, Andrew D. Parsekian, Esther L. Babcock, Eva Stephani, Miriam C. Jones, Guido Grosse, and Edward E. Berg
The Cryosphere, 10, 2673–2692, https://doi.org/10.5194/tc-10-2673-2016, https://doi.org/10.5194/tc-10-2673-2016, 2016
Short summary
Short summary
We combined field data collection with remote sensing data to document the presence and rapid degradation of permafrost in south-central Alaska during 1950–present. Ground temperature measurements confirmed permafrost presence in the region, but remotely sensed images showed that permafrost plateau extent decreased by 60 % since 1950. Better understanding these vulnerable permafrost deposits is important for predicting future permafrost extent across all permafrost regions that are warming.
Pier Paul Overduin, Sebastian Wetterich, Frank Günther, Mikhail N. Grigoriev, Guido Grosse, Lutz Schirrmeister, Hans-Wolfgang Hubberten, and Aleksandr Makarov
The Cryosphere, 10, 1449–1462, https://doi.org/10.5194/tc-10-1449-2016, https://doi.org/10.5194/tc-10-1449-2016, 2016
Short summary
Short summary
How fast does permafrost warm up and thaw after it is covered by the sea? Ice-rich permafrost in the Laptev Sea, Siberia, is rapidly eroded by warm air and waves. We used a floating electrical technique to measure the depth of permafrost thaw below the sea, and compared it to 60 years of coastline retreat and permafrost depths from drilling 30 years ago. Thaw is rapid right after flooding of the land and slows over time. The depth of permafrost is related to how fast the coast retreats.
Fabian Beermann, Moritz Langer, Sebastian Wetterich, Jens Strauss, Julia Boike, Claudia Fiencke, Lutz Schirrmeister, Eva-Maria Pfeiffer, and Lars Kutzbach
Biogeosciences Discuss., https://doi.org/10.5194/bg-2016-117, https://doi.org/10.5194/bg-2016-117, 2016
Revised manuscript not accepted
Short summary
Short summary
This paper aims to quantify pools of inorganic nitrogen in permafrost soils of arctic Siberia and to estimate annual release rates of this nitrogen due to permafrost thaw. We report for the first time stores of inorganic nitrogen in Siberian permafrost soils. These nitrogen stores are important as permafrost thaw can mobilize substantial amounts of nitrogen, potentially changing the nutrient balance of these soils and representing a significant non-carbon permafrost climate feedback.
P. R. Lindgren, G. Grosse, K. M. Walter Anthony, and F. J. Meyer
Biogeosciences, 13, 27–44, https://doi.org/10.5194/bg-13-27-2016, https://doi.org/10.5194/bg-13-27-2016, 2016
Short summary
Short summary
We mapped and characterized methane ebullition bubbles trapped in lake ice, and estimated whole-lake methane emission using high-resolution aerial images of a lake acquired following freeze-up. We identified the location and relative sizes of high- and low-flux seepage zones within the lake. A large number of seeps showed spatiotemporal stability over our study period. Our approach is applicable to other regions to improve the estimation of methane emission from lakes at the regional scale.
J. K. Heslop, K. M. Walter Anthony, A. Sepulveda-Jauregui, K. Martinez-Cruz, A. Bondurant, G. Grosse, and M. C. Jones
Biogeosciences, 12, 4317–4331, https://doi.org/10.5194/bg-12-4317-2015, https://doi.org/10.5194/bg-12-4317-2015, 2015
Short summary
Short summary
The relative magnitude of thermokarst lake CH4 production in surface sediments vs. deeper-thawed permafrost is not well understood. We assessed CH4 production potentials from a lake sediment core and adjacent permafrost tunnel in interior Alaska. CH4 production was highest in the organic-rich surface lake sediments and recently thawed permafrost at the bottom of the talik, implying CH4 production is highly variable and that both modern and ancient OM are important to lake CH4 production.
T. Schneider von Deimling, G. Grosse, J. Strauss, L. Schirrmeister, A. Morgenstern, S. Schaphoff, M. Meinshausen, and J. Boike
Biogeosciences, 12, 3469–3488, https://doi.org/10.5194/bg-12-3469-2015, https://doi.org/10.5194/bg-12-3469-2015, 2015
Short summary
Short summary
We have modelled the carbon release from thawing permafrost soils under various scenarios of future warming. Our results suggests that up to about 140Pg of carbon could be released under strong warming by end of the century. We have shown that abrupt thaw processes under thermokarst lakes can unlock large amounts of perennially frozen carbon stored in deep deposits (which extend many metres into the soil).
J. Strauss, L. Schirrmeister, K. Mangelsdorf, L. Eichhorn, S. Wetterich, and U. Herzschuh
Biogeosciences, 12, 2227–2245, https://doi.org/10.5194/bg-12-2227-2015, https://doi.org/10.5194/bg-12-2227-2015, 2015
Short summary
Short summary
Climatic warming is affecting permafrost, including decomposition of organic matter (OM). However, quantitative data for the quality of OM and its availability for decomposition is limited. We analyzed the quality of OM in late Pleistocene (Yedoma) and Holocene (thermokarst) deposits. A lack of depth trends reveals a constant quality of OM showing that permafrost acts like a freezer, preserving OM quality. This OM will be susceptible to decomposition under climatic warming.
C. D. Arp, M. S. Whitman, B. M. Jones, G. Grosse, B. V. Gaglioti, and K. C. Heim
Biogeosciences, 12, 29–47, https://doi.org/10.5194/bg-12-29-2015, https://doi.org/10.5194/bg-12-29-2015, 2015
Short summary
Short summary
Beaded streams have deep elliptical pools connected by narrow runs that we show are common landforms in the continuous permafrost zone. These fluvial systems often initiate from lakes and occur predictably in headwater portions of moderately sloping watersheds. Snow capture along stream courses reduces ice thickness allowing thawed sediment to persist under most pools. Interpool thermal variability and hydrologic regimes provide important aquatic habitat and connectivity in Arctic landscapes.
G. Hugelius, J. Strauss, S. Zubrzycki, J. W. Harden, E. A. G. Schuur, C.-L. Ping, L. Schirrmeister, G. Grosse, G. J. Michaelson, C. D. Koven, J. A. O'Donnell, B. Elberling, U. Mishra, P. Camill, Z. Yu, J. Palmtag, and P. Kuhry
Biogeosciences, 11, 6573–6593, https://doi.org/10.5194/bg-11-6573-2014, https://doi.org/10.5194/bg-11-6573-2014, 2014
Short summary
Short summary
This study provides an updated estimate of organic carbon stored in the northern permafrost region. The study includes estimates for carbon in soils (0 to 3 m depth) and deeper sediments in river deltas and the Yedoma region. We find that field data is still scarce from many regions. Total estimated carbon storage is ~1300 Pg with an uncertainty range of between 1100 and 1500 Pg. Around 800 Pg carbon is perennially frozen, equivalent to all carbon dioxide currently in the Earth's atmosphere.
L. Liu, K. Schaefer, A. Gusmeroli, G. Grosse, B. M. Jones, T. Zhang, A. D. Parsekian, and H. A. Zebker
The Cryosphere, 8, 815–826, https://doi.org/10.5194/tc-8-815-2014, https://doi.org/10.5194/tc-8-815-2014, 2014
G. Hugelius, J. G. Bockheim, P. Camill, B. Elberling, G. Grosse, J. W. Harden, K. Johnson, T. Jorgenson, C. D. Koven, P. Kuhry, G. Michaelson, U. Mishra, J. Palmtag, C.-L. Ping, J. O'Donnell, L. Schirrmeister, E. A. G. Schuur, Y. Sheng, L. C. Smith, J. Strauss, and Z. Yu
Earth Syst. Sci. Data, 5, 393–402, https://doi.org/10.5194/essd-5-393-2013, https://doi.org/10.5194/essd-5-393-2013, 2013
M. Engram, K. W. Anthony, F. J. Meyer, and G. Grosse
The Cryosphere, 7, 1741–1752, https://doi.org/10.5194/tc-7-1741-2013, https://doi.org/10.5194/tc-7-1741-2013, 2013
F. Günther, P. P. Overduin, A. V. Sandakov, G. Grosse, and M. N. Grigoriev
Biogeosciences, 10, 4297–4318, https://doi.org/10.5194/bg-10-4297-2013, https://doi.org/10.5194/bg-10-4297-2013, 2013
S. Zubrzycki, L. Kutzbach, G. Grosse, A. Desyatkin, and E.-M. Pfeiffer
Biogeosciences, 10, 3507–3524, https://doi.org/10.5194/bg-10-3507-2013, https://doi.org/10.5194/bg-10-3507-2013, 2013
A. Gusmeroli and G. Grosse
The Cryosphere, 6, 1435–1443, https://doi.org/10.5194/tc-6-1435-2012, https://doi.org/10.5194/tc-6-1435-2012, 2012
Related subject area
Biogeochemistry: Sediment
Faithful transfer of radiolarian silicon isotope signatures from water column to sediments in the South China Sea
Ancient clays support contemporary biogeochemical activity in the Critical Zone
Influence of minor hydrocarbon seepage on sulfur cycling in marine subsurface sediments
Dissolved Mn(III) is a key redox intermediate in sediments of a seasonally euxinic coastal basin
Unexpected scarcity of ANME archaea in hydrocarbon seeps within Monterey Bay
Reviews and syntheses: Tufa microbialites on rocky coasts – towards an integrated terminology
Seafloor sediment characterization improves estimates of organic carbon standing stocks: an example from the Eastern Shore Islands, Nova Scotia, Canada
How is particulate organic carbon transported through the river-fed submarine Congo Canyon to the deep sea?
The fate of fixed nitrogen in Santa Barbara Basin sediments during seasonal anoxia
Distinct oxygenation modes of the Gulf of Oman over the past 43 000 years – a multi-proxy approach
Potential impacts of cable bacteria activity on hard-shelled benthic foraminifera: implications for their interpretation as bioindicators or paleoproxies
Evidence of cryptic methane cycling and non-methanogenic methylamine consumption in the sulfate-reducing zone of sediment in the Santa Barbara Basin, California
Assessing global-scale organic matter reactivity patterns in marine sediments using a lognormal reactive continuum model
Deposit-feeding of Nonionellina labradorica (foraminifera) from an Arctic methane seep site and possible association with a methanotroph
Benthic silicon cycling in the Arctic Barents Sea: a reaction–transport model study
Long-term incubations provide insight into the mechanisms of anaerobic oxidation of methane in methanogenic lake sediments
Ideas and perspectives: Sea-level change, anaerobic methane oxidation, and the glacial–interglacial phosphorus cycle
Estimation of the natural background of phosphate in a lowland river using tidal marsh sediment cores
Geochemical consequences of oxygen diffusion from the oceanic crust into overlying sediments and its significance for biogeochemical cycles based on sediments of the northeast Pacific
Carbon sources of benthic fauna in temperate lakes across multiple trophic states
Deep-water inflow event increases sedimentary phosphorus release on a multi-year scale
Bioturbation has a limited effect on phosphorus burial in salt marsh sediments
Biogeochemical impact of cable bacteria on coastal Black Sea sediment
Organic carbon characteristics in ice-rich permafrost in alas and Yedoma deposits, central Yakutia, Siberia
The control of hydrogen sulfide on benthic iron and cadmium fluxes in the oxygen minimum zone off Peru
Quantity and distribution of methane entrapped in sediments of calcareous, Alpine glacier forefields
Assessing the potential for non-turbulent methane escape from the East Siberian Arctic Shelf
Vertical transport of sediment-associated metals and cyanobacteria by ebullition in a stratified lake
Evidence of changes in sedimentation rate and sediment fabric in a low-oxygen setting: Santa Monica Basin, CA
Authigenic formation of Ca–Mg carbonates in the shallow alkaline Lake Neusiedl, Austria
Vivianite formation in ferruginous sediments from Lake Towuti, Indonesia
Impact of ambient conditions on the Si isotope fractionation in marine pore fluids during early diagenesis
Impact of small-scale disturbances on geochemical conditions, biogeochemical processes and element fluxes in surface sediments of the eastern Clarion–Clipperton Zone, Pacific Ocean
Acetate turnover and methanogenic pathways in Amazonian lake sediments
Benthic alkalinity and dissolved inorganic carbon fluxes in the Rhône River prodelta generated by decoupled aerobic and anaerobic processes
Small-scale heterogeneity of trace metals including rare earth elements and yttrium in deep-sea sediments and porewaters of the Peru Basin, southeastern equatorial Pacific
Organic matter contents and degradation in a highly trawled area during fresh particle inputs (Gulf of Castellammare, southwestern Mediterranean)
Identifying the core bacterial microbiome of hydrocarbon degradation and a shift of dominant methanogenesis pathways in the oil and aqueous phases of petroleum reservoirs of different temperatures from China
Effects of eutrophication on sedimentary organic carbon cycling in five temperate lakes
Evidence for microbial iron reduction in the methanic sediments of the oligotrophic southeastern Mediterranean continental shelf
Fracture-controlled fluid transport supports microbial methane-oxidizing communities at Vestnesa Ridge
Hydrothermal alteration of aragonitic biocarbonates: assessment of micro- and nanostructural dissolution–reprecipitation and constraints of diagenetic overprint from quantitative statistical grain-area analysis
Large variations in iron input to an oligotrophic Baltic Sea estuary: impact on sedimentary phosphorus burial
Vivianite formation in methane-rich deep-sea sediments from the South China Sea
Benthic archaea as potential sources of tetraether membrane lipids in sediments across an oxygen minimum zone
Carbon amendment stimulates benthic nitrogen cycling during the bioremediation of particulate aquaculture waste
Modelling biogeochemical processes in sediments from the north-western Adriatic Sea: response to enhanced particulate organic carbon fluxes
Carbon mineralization in Laptev and East Siberian sea shelf and slope sediment
Reviews and syntheses: to the bottom of carbon processing at the seafloor
Scotland's forgotten carbon: a national assessment of mid-latitude fjord sedimentary carbon stocks
Qiang Zhang, George E. A. Swann, Vanessa Pashley, and Matthew S. A. Horstwood
Biogeosciences, 22, 3533–3546, https://doi.org/10.5194/bg-22-3533-2025, https://doi.org/10.5194/bg-22-3533-2025, 2025
Short summary
Short summary
We present the first coupled record of radiolarian silicon isotopes (δ30Sirad) from paired water column and surface sediment samples, along with the fractionation factor for δ30Sirad in the South China Sea. No significant discrepancies in δ30Sirad values were observed between plankton and sediment samples, implying minimal dissolution impact on δ30Sirad during sinking. This indicates faithful preservation of the δ30Sirad signature and its potential for studying past marine silicon cycle changes.
Vanessa M. Alfonso, Peter M. Groffman, Zhongqi Cheng, and David E. Seidemann
Biogeosciences, 22, 3357–3373, https://doi.org/10.5194/bg-22-3357-2025, https://doi.org/10.5194/bg-22-3357-2025, 2025
Short summary
Short summary
Major questions in Critical Zone science center on the ability of ancient materials to support biogeochemical processes related to the cycling of carbon and nitrogen. This study sought to explore organomineral interactions by investigating the functional performance of clays through measurements of biogeochemical processes occurring on these materials. Results indicate that ancient clays are contributing to contemporary Critical Zone biogeochemical processes at ecosystem and landscape scales.
Ellen Schnabel, Aurèle Vuillemin, Cédric C. Laczny, Benoit J. Kunath, André R. Soares, Alexander J. Probst, Rolando Di Primio, Jens Kallmeyer, and the PROSPECTOMICS Consortium
Biogeosciences, 22, 767–784, https://doi.org/10.5194/bg-22-767-2025, https://doi.org/10.5194/bg-22-767-2025, 2025
Short summary
Short summary
This study analysed marine sediment samples from areas with and without minimal hydrocarbon seepage from reservoirs underneath. Depth profiles of dissolved chemical components in the pore water and molecular biological data revealed differences in microbial community composition and activity. These results indicate that even minor hydrocarbon seepage affects sedimentary biogeochemical cycling in marine sediments, potentially providing a new tool for the detection of hydrocarbon reservoirs.
Robin Klomp, Olga M. Żygadłowska, Mike S. M. Jetten, Véronique E. Oldham, Niels A. G. M. van Helmond, Caroline P. Slomp, and Wytze K. Lenstra
Biogeosciences, 22, 751–765, https://doi.org/10.5194/bg-22-751-2025, https://doi.org/10.5194/bg-22-751-2025, 2025
Short summary
Short summary
In marine sediments, dissolved Mn is present as either Mn(III) or Mn(II). We apply a reactive transport model to geochemical data for a seasonally anoxic and sulfidic coastal basin to determine the pathways of formation and removal of dissolved Mn(III) in the sediment. We demonstrate a critical role for reactions with Fe(II) and show evidence for substantial benthic release of dissolved Mn(III). Given the mobility of Mn(III), these findings have important implications for marine Mn cycling.
Amanda C. Semler and Anne E. Dekas
Biogeosciences, 22, 385–403, https://doi.org/10.5194/bg-22-385-2025, https://doi.org/10.5194/bg-22-385-2025, 2025
Short summary
Short summary
Marine hydrocarbon seeps typically host subsurface microorganisms capable of degrading methane before it is emitted to the water column. Here we describe a seep in Monterey Bay which virtually lacks known methanotrophs and where biological consumption of methane at depth is undetected. Our findings suggest that some seeps are missing this critical biofilter and that seeps may be a more significant source of methane to the water column than previously realized.
Thomas W. Garner, J. Andrew G. Cooper, Alan M. Smith, Gavin M. Rishworth, and Matt Forbes
Biogeosciences, 21, 4785–4807, https://doi.org/10.5194/bg-21-4785-2024, https://doi.org/10.5194/bg-21-4785-2024, 2024
Short summary
Short summary
There is a diverse and often conflicting suite of terminologies, classifications, and nomenclature applicable to the study of terrestrial carbonate deposits and microbialites (deposits that wholly or primarily accrete as a result of microbial activity). We review existing schemes, identify duplication and redundancy, and present a new integrated approach applicable to tufa microbialites on rock coasts.
Catherine Brenan, Markus Kienast, Vittorio Maselli, Christopher K. Algar, Benjamin Misiuk, and Craig J. Brown
Biogeosciences, 21, 4569–4586, https://doi.org/10.5194/bg-21-4569-2024, https://doi.org/10.5194/bg-21-4569-2024, 2024
Short summary
Short summary
Quantifying how much organic carbon is stored in seafloor sediments is key to assessing how human activities can accelerate the process of carbon storage at the seabed, an important consideration for climate change. This study uses seafloor sediment maps to model organic carbon content. Carbon estimates were 12 times higher when assuming the absence of detailed sediment maps, demonstrating that high-resolution seafloor mapping is critically important for improved estimates of organic carbon.
Sophie Hage, Megan L. Baker, Nathalie Babonneau, Guillaume Soulet, Bernard Dennielou, Ricardo Silva Jacinto, Robert G. Hilton, Valier Galy, François Baudin, Christophe Rabouille, Clément Vic, Sefa Sahin, Sanem Açikalin, and Peter J. Talling
Biogeosciences, 21, 4251–4272, https://doi.org/10.5194/bg-21-4251-2024, https://doi.org/10.5194/bg-21-4251-2024, 2024
Short summary
Short summary
The land-to-ocean flux of particulate organic carbon (POC) is difficult to measure, inhibiting accurate modeling of the global carbon cycle. Here, we quantify the POC flux between one of the largest rivers on Earth (Congo) and the ocean. POC in the form of vegetation and soil is transported by episodic submarine avalanches in a 1000 km long canyon at up to 5 km water depth. The POC flux induced by avalanches is at least 3 times greater than that induced by the background flow related to tides.
Xuefeng Peng, David J. Yousavich, Annie Bourbonnais, Frank Wenzhöfer, Felix Janssen, Tina Treude, and David L. Valentine
Biogeosciences, 21, 3041–3052, https://doi.org/10.5194/bg-21-3041-2024, https://doi.org/10.5194/bg-21-3041-2024, 2024
Short summary
Short summary
Biologically available (fixed) nitrogen (N) is a limiting nutrient for life in the ocean. Under low-oxygen conditions, fixed N is either removed via denitrification or retained via dissimilatory nitrate reduction to ammonia (DNRA). Using in situ incubations in the Santa Barbara Basin, which undergoes seasonal anoxia, we found that benthic denitrification was the dominant nitrate reduction process, while nitrate availability and organic carbon content control the relative importance of DNRA.
Nicole Burdanowitz, Gerhard Schmiedl, Birgit Gaye, Philipp M. Munz, and Hartmut Schulz
Biogeosciences, 21, 1477–1499, https://doi.org/10.5194/bg-21-1477-2024, https://doi.org/10.5194/bg-21-1477-2024, 2024
Short summary
Short summary
We analyse benthic foraminifera, nitrogen isotopes and lipids in a sediment core from the Gulf of Oman to investigate how the oxygen minimum zone (OMZ) and bottom water (BW) oxygenation have reacted to climatic changes since 43 ka. The OMZ and BW deoxygenation was strong during the Holocene, but the OMZ was well ventilated during the LGM period. We found an unstable mode of oscillating oxygenation states, from moderately oxygenated in cold stadials to deoxygenated in warm interstadials in MIS 3.
Maxime Daviray, Emmanuelle Geslin, Nils Risgaard-Petersen, Vincent V. Scholz, Marie Fouet, and Edouard Metzger
Biogeosciences, 21, 911–928, https://doi.org/10.5194/bg-21-911-2024, https://doi.org/10.5194/bg-21-911-2024, 2024
Short summary
Short summary
Coastal marine sediments are subject to major acidification processes because of climate change and human activities, but these processes can also result from biotic activity. We studied the sediment acidifcation effect on benthic calcareous foraminifera in intertidal mudflats. The strong pH decrease in sediments probably caused by cable bacteria led to calcareous test dissolution of living and dead foraminifera, threatening the test preservation and their robustness as environmental proxies.
Sebastian J. E. Krause, Jiarui Liu, David J. Yousavich, DeMarcus Robinson, David W. Hoyt, Qianhui Qin, Frank Wenzhöfer, Felix Janssen, David L. Valentine, and Tina Treude
Biogeosciences, 20, 4377–4390, https://doi.org/10.5194/bg-20-4377-2023, https://doi.org/10.5194/bg-20-4377-2023, 2023
Short summary
Short summary
Methane is a potent greenhouse gas, and hence it is important to understand its sources and sinks in the environment. Here we present new data from organic-rich surface sediments below an oxygen minimum zone off the coast of California (Santa Barbara Basin) demonstrating the simultaneous microbial production and consumption of methane, which appears to be an important process preventing the build-up of methane in these sediments and the emission into the water column and atmosphere.
Sinan Xu, Bo Liu, Sandra Arndt, Sabine Kasten, and Zijun Wu
Biogeosciences, 20, 2251–2263, https://doi.org/10.5194/bg-20-2251-2023, https://doi.org/10.5194/bg-20-2251-2023, 2023
Short summary
Short summary
We use a reactive continuum model based on a lognormal distribution (l-RCM) to inversely determine model parameters μ and σ at 123 sites across the global ocean. Our results show organic matter (OM) reactivity is more than 3 orders of magnitude higher in shelf than in abyssal regions. In addition, OM reactivity is higher than predicted in some specific regions, yet the l-RCM can still capture OM reactivity features in these regions.
Christiane Schmidt, Emmanuelle Geslin, Joan M. Bernhard, Charlotte LeKieffre, Mette Marianne Svenning, Helene Roberge, Magali Schweizer, and Giuliana Panieri
Biogeosciences, 19, 3897–3909, https://doi.org/10.5194/bg-19-3897-2022, https://doi.org/10.5194/bg-19-3897-2022, 2022
Short summary
Short summary
This study is the first to show non-selective deposit feeding in the foraminifera Nonionella labradorica and the possible uptake of methanotrophic bacteria. We carried out a feeding experiment with a marine methanotroph to examine the ultrastructure of the cell and degradation vacuoles using transmission electron microscopy (TEM). The results revealed three putative methanotrophs at the outside of the cell/test, which could be taken up via non-targeted grazing in seeps or our experiment.
James P. J. Ward, Katharine R. Hendry, Sandra Arndt, Johan C. Faust, Felipe S. Freitas, Sian F. Henley, Jeffrey W. Krause, Christian März, Allyson C. Tessin, and Ruth L. Airs
Biogeosciences, 19, 3445–3467, https://doi.org/10.5194/bg-19-3445-2022, https://doi.org/10.5194/bg-19-3445-2022, 2022
Short summary
Short summary
The seafloor plays an important role in the cycling of silicon (Si), a key nutrient that promotes marine primary productivity. In our model study, we disentangle major controls on the seafloor Si cycle to better anticipate the impacts of continued warming and sea ice melt in the Barents Sea. We uncover a coupling of the iron redox and Si cycles, dissolution of lithogenic silicates, and authigenic clay formation, comprising a Si sink that could have implications for the Arctic Ocean Si budget.
Hanni Vigderovich, Werner Eckert, Michal Elul, Maxim Rubin-Blum, Marcus Elvert, and Orit Sivan
Biogeosciences, 19, 2313–2331, https://doi.org/10.5194/bg-19-2313-2022, https://doi.org/10.5194/bg-19-2313-2022, 2022
Short summary
Short summary
Anaerobic oxidation of methane (AOM) is one of the major processes limiting the release of the greenhouse gas methane from natural environments. Here we show that significant AOM exists in the methane zone of lake sediments in natural conditions and even after long-term (ca. 18 months) anaerobic slurry incubations with two stages. Methanogens were most likely responsible for oxidizing the methane, and humic substances and iron oxides are likely electron acceptors to support this oxidation.
Bjorn Sundby, Pierre Anschutz, Pascal Lecroart, and Alfonso Mucci
Biogeosciences, 19, 1421–1434, https://doi.org/10.5194/bg-19-1421-2022, https://doi.org/10.5194/bg-19-1421-2022, 2022
Short summary
Short summary
A glacial–interglacial methane-fuelled redistribution of reactive phosphorus between the oceanic and sedimentary phosphorus reservoirs can occur in the ocean when falling sea level lowers the pressure on the seafloor, destabilizes methane hydrates, and triggers the dissolution of P-bearing iron oxides. The mass of phosphate potentially mobilizable from the sediment is similar to the size of the current oceanic reservoir. Hence, this process may play a major role in the marine phosphorus cycle.
Florian Lauryssen, Philippe Crombé, Tom Maris, Elliot Van Maldegem, Marijn Van de Broek, Stijn Temmerman, and Erik Smolders
Biogeosciences, 19, 763–776, https://doi.org/10.5194/bg-19-763-2022, https://doi.org/10.5194/bg-19-763-2022, 2022
Short summary
Short summary
Surface waters in lowland regions have a poor surface water quality, mainly due to excess nutrients like phosphate. Therefore, we wanted to know the phosphate levels without humans, also called the pre-industrial background. Phosphate binds strongly to sediment particles, suspended in the river water. In this research we used sediments deposited by a river as an archive for surface water phosphate back to 1800 CE. Pre-industrial phosphate levels were estimated at one-third of the modern levels.
Gerard J. M. Versteegh, Andrea Koschinsky, Thomas Kuhn, Inken Preuss, and Sabine Kasten
Biogeosciences, 18, 4965–4984, https://doi.org/10.5194/bg-18-4965-2021, https://doi.org/10.5194/bg-18-4965-2021, 2021
Short summary
Short summary
Oxygen penetrates sediments not only from the ocean bottom waters but also from the basement. The impact of the latter is poorly understood. We show that this basement oxygen has a clear impact on the nitrogen cycle, the redox state, and the distribution of manganese, nickel cobalt and organic matter in the sediments. This is important for (1) global biogeochemical cycles, (2) understanding sedimentary life and (3) the interpretation of the sediment record to reconstruct the past.
Annika Fiskal, Eva Anthamatten, Longhui Deng, Xingguo Han, Lorenzo Lagostina, Anja Michel, Rong Zhu, Nathalie Dubois, Carsten J. Schubert, Stefano M. Bernasconi, and Mark A. Lever
Biogeosciences, 18, 4369–4388, https://doi.org/10.5194/bg-18-4369-2021, https://doi.org/10.5194/bg-18-4369-2021, 2021
Short summary
Short summary
Microbially produced methane can serve as a carbon source for freshwater macrofauna most likely through grazing on methane-oxidizing bacteria. This study investigates the contributions of different carbon sources to macrofaunal biomass. Our data suggest that the average contribution of methane-derived carbon is similar between different fauna but overall remains low. This is further supported by the low abundance of methane-cycling microorganisms.
Astrid Hylén, Sebastiaan J. van de Velde, Mikhail Kononets, Mingyue Luo, Elin Almroth-Rosell, and Per O. J. Hall
Biogeosciences, 18, 2981–3004, https://doi.org/10.5194/bg-18-2981-2021, https://doi.org/10.5194/bg-18-2981-2021, 2021
Short summary
Short summary
Sediments in oxygen-depleted ocean areas release high amounts of phosphorus, feeding algae that consume oxygen upon degradation, leading to further phosphorus release. Oxygenation is thought to trap phosphorus in the sediment and break this feedback. We studied the sediment phosphorus cycle in a previously anoxic area after an inflow of oxic water. Surprisingly, the sediment phosphorus release increased, showing that feedbacks between phosphorus release and oxygen depletion can be hard to break.
Sebastiaan J. van de Velde, Rebecca K. James, Ine Callebaut, Silvia Hidalgo-Martinez, and Filip J. R. Meysman
Biogeosciences, 18, 1451–1461, https://doi.org/10.5194/bg-18-1451-2021, https://doi.org/10.5194/bg-18-1451-2021, 2021
Short summary
Short summary
Some 540 Myr ago, animal life evolved in the ocean. Previous research suggested that when these early animals started inhabiting the seafloor, they retained phosphorus in the seafloor, thereby limiting photosynthesis in the ocean. We studied salt marsh sediments with and without animals and found that their impact on phosphorus retention is limited, which implies that their impact on the global environment might have been less drastic than previously assumed.
Martijn Hermans, Nils Risgaard-Petersen, Filip J. R. Meysman, and Caroline P. Slomp
Biogeosciences, 17, 5919–5938, https://doi.org/10.5194/bg-17-5919-2020, https://doi.org/10.5194/bg-17-5919-2020, 2020
Short summary
Short summary
This paper demonstrates that the recently discovered cable bacteria are capable of using a mineral, known as siderite, as a source for the formation of iron oxides. This work also demonstrates that the activity of cable bacteria can lead to a distinct subsurface layer in the sediment that can be used as a marker for their activity.
Torben Windirsch, Guido Grosse, Mathias Ulrich, Lutz Schirrmeister, Alexander N. Fedorov, Pavel Y. Konstantinov, Matthias Fuchs, Loeka L. Jongejans, Juliane Wolter, Thomas Opel, and Jens Strauss
Biogeosciences, 17, 3797–3814, https://doi.org/10.5194/bg-17-3797-2020, https://doi.org/10.5194/bg-17-3797-2020, 2020
Short summary
Short summary
To extend the knowledge on circumpolar deep permafrost carbon storage, we examined two deep permafrost deposit types (Yedoma and alas) in central Yakutia. We found little but partially undecomposed organic carbon as a result of largely changing sedimentation processes. The carbon stock of the examined Yedoma deposits is about 50 % lower than the general Yedoma domain mean, implying a very hetererogeneous Yedoma composition, while the alas is approximately 80 % below the thermokarst deposit mean.
Anna Plass, Christian Schlosser, Stefan Sommer, Andrew W. Dale, Eric P. Achterberg, and Florian Scholz
Biogeosciences, 17, 3685–3704, https://doi.org/10.5194/bg-17-3685-2020, https://doi.org/10.5194/bg-17-3685-2020, 2020
Short summary
Short summary
We compare the cycling of Fe and Cd in sulfidic sediments of the Peruvian oxygen minimum zone. Due to the contrasting solubility of their sulfide minerals, the sedimentary Fe release and Cd burial fluxes covary with spatial and temporal distributions of H2S. Depending on the solubility of their sulfide minerals, sedimentary trace metal fluxes will respond differently to ocean deoxygenation/expansion of H2S concentrations, which may change trace metal stoichiometry of upwelling water masses.
Biqing Zhu, Manuel Kübler, Melanie Ridoli, Daniel Breitenstein, and Martin H. Schroth
Biogeosciences, 17, 3613–3630, https://doi.org/10.5194/bg-17-3613-2020, https://doi.org/10.5194/bg-17-3613-2020, 2020
Short summary
Short summary
We provide evidence that the greenhouse gas methane (CH4) is enclosed in calcareous glacier-forefield sediments across Switzerland. Geochemical analyses confirmed that this ancient CH4 has its origin in the calcareous parent bedrock. Our estimate of the total quantity of CH4 enclosed in sediments across Switzerland indicates a large CH4 mass (~105 t CH4). We produced evidence that CH4 is stable in its enclosed state, but additional experiments are needed to elucidate its long-term fate.
Matteo Puglini, Victor Brovkin, Pierre Regnier, and Sandra Arndt
Biogeosciences, 17, 3247–3275, https://doi.org/10.5194/bg-17-3247-2020, https://doi.org/10.5194/bg-17-3247-2020, 2020
Short summary
Short summary
A reaction-transport model to assess the potential non-turbulent methane flux from the East Siberian Arctic sediments to water columns is applied here. We show that anaerobic oxidation of methane (AOM) is an efficient filter except for high values of sedimentation rate and advective flow, which enable considerable non-turbulent steady-state methane fluxes. Significant transient methane fluxes can also occur during the building-up phase of the AOM-performing biomass microbial community.
Kyle Delwiche, Junyao Gu, Harold Hemond, and Sarah P. Preheim
Biogeosciences, 17, 3135–3147, https://doi.org/10.5194/bg-17-3135-2020, https://doi.org/10.5194/bg-17-3135-2020, 2020
Short summary
Short summary
In this study, we investigate whether bubbles transport sediments containing arsenic and cyanobacteria from the bottom to the top of a polluted lake. We measured arsenic and cyanobacteria from bubble traps in the lake and from an experimental bubble column in the laboratory. We found that bubble transport was not an important source of arsenic in the surface waters but that bubbles could transport enough cyanobacteria to the surface to exacerbate harmful algal blooms.
Nathaniel Kemnitz, William M. Berelson, Douglas E. Hammond, Laura Morine, Maria Figueroa, Timothy W. Lyons, Simon Scharf, Nick Rollins, Elizabeth Petsios, Sydnie Lemieux, and Tina Treude
Biogeosciences, 17, 2381–2396, https://doi.org/10.5194/bg-17-2381-2020, https://doi.org/10.5194/bg-17-2381-2020, 2020
Short summary
Short summary
Our paper shows how sedimentation in a very low oxygen setting provides a unique record of environmental change. We look at the past 250 years through the filter of sediment accumulation via radioisotope dating and other physical and chemical analyses of these sediments. We conclude, remarkably, that there has been very little change in net sediment mass accumulation through the past 100–150 years, yet just prior to 1900 CE, sediments were accumulating at 50 %–70 % of today's rate.
Dario Fussmann, Avril Jean Elisabeth von Hoyningen-Huene, Andreas Reimer, Dominik Schneider, Hana Babková, Robert Peticzka, Andreas Maier, Gernot Arp, Rolf Daniel, and Patrick Meister
Biogeosciences, 17, 2085–2106, https://doi.org/10.5194/bg-17-2085-2020, https://doi.org/10.5194/bg-17-2085-2020, 2020
Short summary
Short summary
Dolomite (CaMg(CO3)2) is supersaturated in many aquatic settings (e.g., seawater) on modern Earth but does not precipitate directly from the fluid, a fact known as the dolomite problem. The widely acknowledged concept of dolomite precipitation involves microbial extracellular polymeric substances (EPSs) and anoxic conditions as important drivers. In contrast, results from Lake Neusiedl support an alternative concept of Ca–Mg carbonate precipitation under aerobic and alkaline conditions.
Aurèle Vuillemin, André Friese, Richard Wirth, Jan A. Schuessler, Anja M. Schleicher, Helga Kemnitz, Andreas Lücke, Kohen W. Bauer, Sulung Nomosatryo, Friedhelm von Blanckenburg, Rachel Simister, Luis G. Ordoñez, Daniel Ariztegui, Cynthia Henny, James M. Russell, Satria Bijaksana, Hendrik Vogel, Sean A. Crowe, Jens Kallmeyer, and the Towuti Drilling Project
Science team
Biogeosciences, 17, 1955–1973, https://doi.org/10.5194/bg-17-1955-2020, https://doi.org/10.5194/bg-17-1955-2020, 2020
Short summary
Short summary
Ferruginous lakes experience restricted primary production due to phosphorus trapping by ferric iron oxides under oxic conditions. We report the presence of large crystals of vivianite, a ferrous iron phosphate, in sediments from Lake Towuti, Indonesia. We address processes of P retention linked to diagenesis of iron phases. Vivianite crystals had light Fe2+ isotope signatures and contained mineral inclusions consistent with antecedent processes of microbial sulfate and iron reduction.
Sonja Geilert, Patricia Grasse, Kristin Doering, Klaus Wallmann, Claudia Ehlert, Florian Scholz, Martin Frank, Mark Schmidt, and Christian Hensen
Biogeosciences, 17, 1745–1763, https://doi.org/10.5194/bg-17-1745-2020, https://doi.org/10.5194/bg-17-1745-2020, 2020
Short summary
Short summary
Marine silicate weathering is a key process of the marine silica cycle; however, its controlling processes are not well understood. In the Guaymas Basin, silicate weathering has been studied under markedly differing ambient conditions. Environmental settings like redox conditions or terrigenous input of reactive silicates appear to be major factors controlling marine silicate weathering. These factors need to be taken into account in future oceanic mass balances of Si and in modeling studies.
Jessica B. Volz, Laura Haffert, Matthias Haeckel, Andrea Koschinsky, and Sabine Kasten
Biogeosciences, 17, 1113–1131, https://doi.org/10.5194/bg-17-1113-2020, https://doi.org/10.5194/bg-17-1113-2020, 2020
Short summary
Short summary
Potential future deep-sea mining of polymetallic nodules at the seafloor is expected to severely harm the marine environment. However, the consequences on deep-sea ecosystems are still poorly understood. This study on surface sediments from man-made disturbance tracks in the Pacific Ocean shows that due to the removal of the uppermost sediment layer and thereby the loss of organic matter, the geochemical system in the sediments is disturbed for millennia before reaching a new equilibrium.
Ralf Conrad, Melanie Klose, and Alex Enrich-Prast
Biogeosciences, 17, 1063–1069, https://doi.org/10.5194/bg-17-1063-2020, https://doi.org/10.5194/bg-17-1063-2020, 2020
Short summary
Short summary
Lake sediments release the greenhouse gas CH4. Acetate is an important precursor. Although Amazonian lake sediments all contained acetate-consuming methanogens, measurement of the turnover of labeled acetate showed that some sediments converted acetate not to CH4 plus CO2, as expected, but only to CO2. Our results indicate the operation of acetate-oxidizing microorganisms couples the oxidation process to syntrophic methanogenic partners and/or to the reduction of organic compounds.
Jens Rassmann, Eryn M. Eitel, Bruno Lansard, Cécile Cathalot, Christophe Brandily, Martial Taillefert, and Christophe Rabouille
Biogeosciences, 17, 13–33, https://doi.org/10.5194/bg-17-13-2020, https://doi.org/10.5194/bg-17-13-2020, 2020
Short summary
Short summary
In this paper, we use a large set of measurements made using in situ and lab techniques to elucidate the cause of dissolved inorganic carbon fluxes in sediments from the Rhône delta and its companion compound alkalinity, which carries the absorption capacity of coastal waters with respect to atmospheric CO2. We show that sediment processes (sulfate reduction, FeS precipitation and accumulation) are crucial in generating the alkalinity fluxes observed in this study by in situ incubation chambers.
Sophie A. L. Paul, Matthias Haeckel, Michael Bau, Rajina Bajracharya, and Andrea Koschinsky
Biogeosciences, 16, 4829–4849, https://doi.org/10.5194/bg-16-4829-2019, https://doi.org/10.5194/bg-16-4829-2019, 2019
Short summary
Short summary
We studied the upper 10 m of deep-sea sediments, including pore water, in the Peru Basin to understand small-scale variability of trace metals. Our results show high spatial variability related to topographical variations, which in turn impact organic matter contents, degradation processes, and trace metal cycling. Another interesting finding was the influence of dissolving buried nodules on the surrounding sediment and trace metal cycling.
Sarah Paradis, Antonio Pusceddu, Pere Masqué, Pere Puig, Davide Moccia, Tommaso Russo, and Claudio Lo Iacono
Biogeosciences, 16, 4307–4320, https://doi.org/10.5194/bg-16-4307-2019, https://doi.org/10.5194/bg-16-4307-2019, 2019
Short summary
Short summary
Chronic deep bottom trawling in the Gulf of Castellammare (SW Mediterranean) erodes large volumes of sediment, exposing over-century-old sediment depleted in organic matter. Nevertheless, the arrival of fresh and nutritious sediment recovers superficial organic matter in trawling grounds and leads to high turnover rates, partially and temporarily mitigating the impacts of bottom trawling. However, this deposition is ephemeral and it will be swiftly eroded by the passage of the next trawler.
Zhichao Zhou, Bo Liang, Li-Ying Wang, Jin-Feng Liu, Bo-Zhong Mu, Hojae Shim, and Ji-Dong Gu
Biogeosciences, 16, 4229–4241, https://doi.org/10.5194/bg-16-4229-2019, https://doi.org/10.5194/bg-16-4229-2019, 2019
Short summary
Short summary
This study shows a core bacterial microbiome with a small proportion of shared operational taxonomic units of common sequences among all oil reservoirs. Dominant methanogenesis shifts from the hydrogenotrophic pathway in water phase to the acetoclastic pathway in the oil phase at high temperatures, but the opposite is true at low temperatures. There are also major functional metabolism differences between the two phases for amino acids, hydrocarbons, and carbohydrates.
Annika Fiskal, Longhui Deng, Anja Michel, Philip Eickenbusch, Xingguo Han, Lorenzo Lagostina, Rong Zhu, Michael Sander, Martin H. Schroth, Stefano M. Bernasconi, Nathalie Dubois, and Mark A. Lever
Biogeosciences, 16, 3725–3746, https://doi.org/10.5194/bg-16-3725-2019, https://doi.org/10.5194/bg-16-3725-2019, 2019
Hanni Vigderovich, Lewen Liang, Barak Herut, Fengping Wang, Eyal Wurgaft, Maxim Rubin-Blum, and Orit Sivan
Biogeosciences, 16, 3165–3181, https://doi.org/10.5194/bg-16-3165-2019, https://doi.org/10.5194/bg-16-3165-2019, 2019
Short summary
Short summary
Microbial iron reduction participates in important biogeochemical cycles. In the last decade iron reduction has been observed in many aquatic sediments below its classical zone, in the methane production zone, suggesting a link between the two cycles. Here we present evidence for microbial iron reduction in the methanogenic depth of the oligotrophic SE Mediterranean continental shelf using mainly geochemical and microbial sedimentary profiles and suggest possible mechanisms for this process.
Haoyi Yao, Wei-Li Hong, Giuliana Panieri, Simone Sauer, Marta E. Torres, Moritz F. Lehmann, Friederike Gründger, and Helge Niemann
Biogeosciences, 16, 2221–2232, https://doi.org/10.5194/bg-16-2221-2019, https://doi.org/10.5194/bg-16-2221-2019, 2019
Short summary
Short summary
How methane is transported in the sediment is important for the microbial community living on methane. Here we report an observation of a mini-fracture that facilitates the advective gas transport of methane in the sediment, compared to the diffusive fluid transport without a fracture. We found contrasting bio-geochemical signals in these different transport modes. This finding can help to fill the gap in the fracture network system in modulating methane dynamics in surface sediments.
Laura A. Casella, Sixin He, Erika Griesshaber, Lourdes Fernández-Díaz, Martina Greiner, Elizabeth M. Harper, Daniel J. Jackson, Andreas Ziegler, Vasileios Mavromatis, Martin Dietzel, Anton Eisenhauer, Sabino Veintemillas-Verdaguer, Uwe Brand, and Wolfgang W. Schmahl
Biogeosciences, 15, 7451–7484, https://doi.org/10.5194/bg-15-7451-2018, https://doi.org/10.5194/bg-15-7451-2018, 2018
Short summary
Short summary
Biogenic carbonates record past environmental conditions. Fossil shell chemistry and microstructure change as metastable biogenic carbonates are replaced by inorganic calcite. Simulated diagenetic alteration at 175 °C of different shell microstructures showed that (nacreous) shell aragonite and calcite were partially replaced by coarse inorganic calcite crystals due to dissolution–reprecipitation reactions. EBSD maps allowed for qualitative assessment of the degree of diagenetic overprint.
Wytze K. Lenstra, Matthias Egger, Niels A. G. M. van Helmond, Emma Kritzberg, Daniel J. Conley, and Caroline P. Slomp
Biogeosciences, 15, 6979–6996, https://doi.org/10.5194/bg-15-6979-2018, https://doi.org/10.5194/bg-15-6979-2018, 2018
Short summary
Short summary
We show that burial rates of phosphorus (P) in an estuary in the northern Baltic Sea are very high. We demonstrate that at high sedimentation rates, P retention in the sediment is related to the formation of vivianite. With a reactive transport model, we assess the sensitivity of sedimentary vivianite formation. We suggest that enrichments of iron and P in the sediment are linked to periods of enhanced riverine input of Fe, which subsequently strongly enhances P burial in coastal sediments.
Jiarui Liu, Gareth Izon, Jiasheng Wang, Gilad Antler, Zhou Wang, Jie Zhao, and Matthias Egger
Biogeosciences, 15, 6329–6348, https://doi.org/10.5194/bg-15-6329-2018, https://doi.org/10.5194/bg-15-6329-2018, 2018
Short summary
Short summary
Our work provides new insights into the biogeochemical cycling of iron, methane and phosphorus. We found that vivianite, an iron-phosphate mineral, is pervasive in methane-rich sediments, suggesting that iron reduction at depth is coupled to phosphorus and methane cycling on a much greater spatial scale than previously assumed. Acting as an important burial mechanism for iron and phosphorus, vivianite authigenesis may be an under-considered process in both modern and ancient settings alike.
Marc A. Besseling, Ellen C. Hopmans, R. Christine Boschman, Jaap S. Sinninghe Damsté, and Laura Villanueva
Biogeosciences, 15, 4047–4064, https://doi.org/10.5194/bg-15-4047-2018, https://doi.org/10.5194/bg-15-4047-2018, 2018
Short summary
Short summary
Benthic archaea comprise a significant part of the total prokaryotic biomass in marine sediments. Here, we compared the archaeal diversity and intact polar lipid (IPL) composition in both surface and subsurface sediments with different oxygen regimes in the Arabian Sea oxygen minimum zone. The oxygenated sediments were dominated by Thaumarchaeota and IPL-GDGT-0. The anoxic sediment contained highly diverse archaeal communities and high relative abundances of IPL-GDGT-1 to -4.
Georgina Robinson, Thomas MacTavish, Candida Savage, Gary S. Caldwell, Clifford L. W. Jones, Trevor Probyn, Bradley D. Eyre, and Selina M. Stead
Biogeosciences, 15, 1863–1878, https://doi.org/10.5194/bg-15-1863-2018, https://doi.org/10.5194/bg-15-1863-2018, 2018
Short summary
Short summary
This study examined the effect of adding carbon to a sediment-based effluent treatment system to treat nitrogen-rich aquaculture waste. The research was conducted in incubation chambers to measure the exchange of gases and nutrients across the sediment–water interface and examine changes in the sediment microbial community. Adding carbon increased the amount of nitrogen retained in the treatment system, thereby reducing the levels of nitrogen needing to be discharged to the environment.
Daniele Brigolin, Christophe Rabouille, Bruno Bombled, Silvia Colla, Salvatrice Vizzini, Roberto Pastres, and Fabio Pranovi
Biogeosciences, 15, 1347–1366, https://doi.org/10.5194/bg-15-1347-2018, https://doi.org/10.5194/bg-15-1347-2018, 2018
Short summary
Short summary
We present the result of a study carried out in the north-western Adriatic Sea by combining two different types of models with field sampling. A mussel farm was taken as a local source of perturbation to the natural flux of particulate organic carbon to the sediment. Differences in fluxes were primarily associated with mussel physiological conditions. Although restricted, these changes in particulate organic carbon fluxes induced visible effects on sediment biogeochemistry.
Volker Brüchert, Lisa Bröder, Joanna E. Sawicka, Tommaso Tesi, Samantha P. Joye, Xiaole Sun, Igor P. Semiletov, and Vladimir A. Samarkin
Biogeosciences, 15, 471–490, https://doi.org/10.5194/bg-15-471-2018, https://doi.org/10.5194/bg-15-471-2018, 2018
Short summary
Short summary
We determined the aerobic and anaerobic degradation rates of land- and marine-derived organic material in East Siberian shelf sediment. Marine plankton-derived organic carbon was the main source for the oxic dissolved carbon dioxide production, whereas terrestrial organic material significantly contributed to the production of carbon dioxide under anoxic conditions. Our direct degradation rate measurements provide new constraints for the present-day Arctic marine carbon budget.
Jack J. Middelburg
Biogeosciences, 15, 413–427, https://doi.org/10.5194/bg-15-413-2018, https://doi.org/10.5194/bg-15-413-2018, 2018
Short summary
Short summary
Organic carbon processing at the seafloor is studied by geologists to better understand the sedimentary record, by biogeochemists to quantify burial and respiration, by organic geochemists to elucidate compositional changes, and by ecologists to follow carbon transfers within food webs. These disciplinary approaches have their strengths and weaknesses. This award talk provides a synthesis, highlights the role of animals in sediment carbon processing and presents some new concepts.
Craig Smeaton, William E. N. Austin, Althea L. Davies, Agnes Baltzer, John A. Howe, and John M. Baxter
Biogeosciences, 14, 5663–5674, https://doi.org/10.5194/bg-14-5663-2017, https://doi.org/10.5194/bg-14-5663-2017, 2017
Short summary
Short summary
Fjord sediments are recognised as hotspots for the burial and long-term storage of carbon. In this study, we use the Scottish fjords as a natural laboratory. Using geophysical and geochemical analysis in combination with upscaling techniques, we have generated the first full national sedimentary C inventory for a fjordic system. The results indicate that the Scottish fjords on a like-for-like basis are more effective as C stores than their terrestrial counterparts, including Scottish peatlands.
Cited articles
Andersson, R. A., Meyers, P., Hornibrook, E., Kuhry, P., and Mörth, C.: Elemental and isotopic carbon and nitrogen records of organic matter accumulation in a Holocene permafrost peat sequence in the East European Russian Arctic, J. Quaternary Sci., 27, 545–552, https://doi.org/10.1002/jqs.2541, 2012.
Arp, C. D., Jones, B. M., Urban, F. E., and Grosse, G.: Hydrogeomorphic processes of thermokarst lakes with grounded-ice and floating-ice regimes on the Arctic coastal plain, Alaska, Hydrol. Process., 25, 2422–2438, https://doi.org/10.1002/hyp.8019, 2011.
Ballinger, T. J., Bigaalke, S., Walsh, J. E., Brettschneider, B., Thoman, R. L., Bhatt, U. S., Hanna, E., Hanssen-Bauer, I., Kim, S.-J., Overland, J. E., and Wang, M.: NOAA Arctic Report Card 2023: Surface Air Temperature, https://doi.org/10.25923/X3TA-6E63, 2023.
Bischoff, N., Mikutta, R., Shibistova, O., Dohrmann, R., Herdtle, D., Gerhard, L., Fritzsche, F., Puzanov, A., Silanteva, M., Grebennikova, A., and Guggenberger, G.: Organic matter dynamics along a salinity gradient in Siberian steppe soils, Biogeosciences, 15, 13–29, https://doi.org/10.5194/bg-15-13-2018, 2018.
Biskaborn, B. K., Smith, S. L., Noetzli, J., Matthes, H., Vieira, G., Streletskiy, D. A., Schoeneich, P., Romanovsky, V. E., Lewkowicz, A. G., Abramov, A., Allard, M., Boike, J., Cable, W. L., Christiansen, H. H., Delaloye, R., Diekmann, B., Drozdov, D., Etzelmüller, B., Grosse, G., Guglielmin, M., Ingeman-Nielsen, T., Isaksen, K., Ishikawa, M., Johansson, M., Johannsson, H., Joo, A., Kaverin, D., Kholodov, A., Konstantinov, P., Kröger, T., Lambiel, C., Lanckman, J.-P., Luo, D., Malkova, G., Meiklejohn, I., Moskalenko, N., Oliva, M., Phillips, M., Ramos, M., Sannel, A. B. K., Sergeev, D., Seybold, C., Skryabin, P., Vasiliev, A., Wu, Q., Yoshikawa, K., Zheleznyak, M., and Lantuit, H.: Permafrost is warming at a global scale, Nat. Commun., 10, 264, https://doi.org/10.1038/s41467-018-08240-4, 2019.
Blott, S. J. and Pye, K.: GRADISTAT: a grain size distribution and statistics package for the analysis of unconsolidated sediments, Earth Surf. Proc. Land., 26, 1237–1248, https://doi.org/10.1002/esp.261, 2001.
Bockheim, J. G., Hinkel, K. M., Eisner, W. R., and Dai, X. Y.: Carbon Pools and Accumulation Rates in an Age-Series of Soils in Drained Thaw-Lake Basins, Arctic Alaska, Soil Sci. Soc. Am. J., 68, 697–704, https://doi.org/10.2136/sssaj2004.6970, 2004.
Bray, E. E. and Evans, E. D.: Distribution of n-paraffins as a clue to recognition of source beds, Geochim. Cosmochim. Ac., 22, 2–15, https://doi.org/10.1016/0016-7037(61)90069-2, 1961.
Chakraborty, P., Sarkar, A., Vudamala, K., Naik, R., and Nath, B. N.: Organic matter – A key factor in controlling mercury distribution in estuarine sediment, Mar. Chem., 173, 302–309, https://doi.org/10.1016/j.marchem.2014.10.005, 2015.
Cohen, J., Zhang, X., Francis, J., Jung, T., Kwok, R., Overland, J., Ballinger, T. J., Bhatt, U. S., Chen, H. W., Coumou, D., Feldstein, S., Gu, H., Handorf, D., Henderson, G., Ionita, M., Kretschmer, M., Laliberte, F., Lee, S., Linderholm, H. W., Maslowski, W., Peings, Y., Pfeiffer, K., Rigor, I., Semmler, T., Stroeve, J., Taylor, P. C., Vavrus, S., Vihma, T., Wang, S., Wendisch, M., Wu, Y., and Yoon, J.: Divergent consensuses on Arctic amplification influence on midlatitude severe winter weather, Nat. Clim. Change, 10, 20–29, https://doi.org/10.1038/s41558-019-0662-y, 2020.
Ficken, K. J., Li, B., Swain, D. L., and Eglinton, G.: An n-alkane proxy for the sedimentary input of submerged/floating freshwater aquatic macrophytes, Org. Geochem., 31, 745–749, https://doi.org/10.1016/S0146-6380(00)00081-4, 2000.
Fuchs, M., Grosse, G., Strauss, J., Günther, F., Grigoriev, M., Maximov, G. M., and Hugelius, G.: Carbon and nitrogen pools in thermokarst-affected permafrost landscapes in Arctic Siberia, Biogeosciences, 15, 953–971, https://doi.org/10.5194/bg-15-953-2018, 2018.
Fuchs, M., Lenz, J., Jock, S., Nitze, I., Jones, B. M., Strauss, J., Günther, F., and Grosse, G.: Organic Carbon and Nitrogen Stocks Along a Thermokarst Lake Sequence in Arctic Alaska, J. Geophys. Res.-Biogeo., 124, 1230–1247, https://doi.org/10.1029/2018JG004591, 2019.
Giest, F., Jenrich, M., Grosse, G., Jones, B., Mangelsdorf, K., Windirsch, T., and Strauss, J.: Biogeochemical characteristics of sediment cores from a land – shore transect in the Teshekpuk Lake Region in Arctic Alaska, 2022, PANGAEA [data set], https://doi.org/10.1594/PANGAEA.971246, 2024a.
Giest, F., Jenrich, M., Grosse, G., Jones, B., Mangelsdorf, K., Windirsch, T., and Strauss, J.: Biomarkers of sediment cores from a land – shore transect in the Teshekpuk Lake Region in Arctic Alaska, 2022, PANGAEA [data set], https://doi.org/10.1594/PANGAEA.971595, 2024b.
Giest, F., Jenrich, M., Grosse, G., Jones, B., Mangelsdorf, K., Windirsch, T., and Strauss, J.: Sedimentological characteristics of sediment cores from a land – shore transect in the Teshekpuk Lake Region in Arctic Alaska, 2022, PANGAEA [data set], https://doi.org/10.1594/PANGAEA.971244, 2024c.
Grosse, G., Jones, B., and Arp, C.: 8.21 Thermokarst Lakes, Drainage, and Drained Basins, in: Treatise on Geomorphology, edited by: Shroder, J. F., Elsevier, 325–353, https://doi.org/10.1016/B978-0-12-374739-6.00216-5, 2013.
Haugk, C., Jongejans, L. L., Mangelsdorf, K., Fuchs, M., Ogneva, O., Palmtag, J., Mollenhauer, G., Mann, P. J., Overduin, P. P., Grosse, G., Sanders, T., Tuerena, R. E., Schirrmeister, L., Wetterich, S., Kizyakov, A., Karger, C., and Strauss, J.: Organic matter characteristics of a rapidly eroding permafrost cliff in NE Siberia (Lena Delta, Laptev Sea region), Biogeosciences, 19, 2079–2094, https://doi.org/10.5194/bg-19-2079-2022, 2022.
Hugelius, G., Strauss, J., Zubrzycki, S., Harden, J. W., Schuur, E. A. G., Ping, C.-L., Schirrmeister, L., Grosse, G., Michaelson, G. J., Koven, C. D., O'Donnell, J. A., Elberling, B., Mishra, U., Camill, P., Yu, Z., Palmtag, J., and Kuhry, P.: Estimated stocks of circumpolar permafrost carbon with quantified uncertainty ranges and identified data gaps, Biogeosciences, 11, 6573–6593, https://doi.org/10.5194/bg-11-6573-2014, 2014.
Intergovernmental Panel on Climate Change (IPCC): The Ocean and Cryosphere in a Changing Climate: Special Report of the Intergovernmental Panel on Climate Change, 1st edn., Cambridge University Press, https://doi.org/10.1017/9781009157964, 2022.
Intergovernmental Panel on Climate Change (IPCC): Climate Change 2022 – Impacts, Adaptation and Vulnerability: Working Group II Contribution to the Sixth Assessment Report of the Intergovernmental Panel on Climate Change, 1st edn., Cambridge University Press, https://doi.org/10.1017/9781009325844, 2023.
Jenrich, M., Angelopoulos, M., Grosse, G., Overduin, P. P., Schirrmeister, L., Nitze, I., Biskaborn, B. K., Liebner, S., Grigoriev, M., Murray, A., Jongejans, L. L., and Strauss, J.: Thermokarst Lagoons: A Core-Based Assessment of Depositional Characteristics and an Estimate of Carbon Pools on the Bykovsky Peninsula, Front. Earth Sci., 9, 637899, https://doi.org/10.3389/feart.2021.637899, 2021.
Jenrich, M., Prodinger, M., Nitze, I., Grosse, G., and Strauss, J.: Thermokarst lagoons: Distribution, classification, and dynamics in permafrost-to-marine transition, Permafrost Periglac. Process., PPP70001, https://doi.org/10.1002/ppp.70001, 2025.
Jones, B. M. and Arp, C. D.: Observing a Catastrophic Thermokarst Lake Drainage in Northern Alaska, Permafrost Periglac., 26, 119–128, https://doi.org/10.1002/ppp.1842, 2015.
Jones, B. M., Arp, C. D., Jorgenson, M. T., Hinkel, K. M., Schmutz, J. A., and Flint, P. L.: Increase in the rate and uniformity of coastline erosion in Arctic Alaska, Geophys. Res. Lett., 36, 2008GL036205, https://doi.org/10.1029/2008GL036205, 2009.
Jones, B. M., Farquharson, L. M., Baughman, C. A., Buzard, R. M., Arp, C. D., Grosse, G., Bull, D. L., Günther, F., Nitze, I., Urban, F., Kasper, J. L., Frederick, J. M., Thomas, M., Jones, C., Mota, A., Dallimore, S., Tweedie, C., Maio, C., Mann, D. H., Richmond, B., Gibbs, A., Xiao, M., Sachs, T., Iwahana, G., Kanevskiy, M., and Romanovsky, V. E.: A decade of remotely sensed observations highlight complex processes linked to coastal permafrost bluff erosion in the Arctic, Environ. Res. Lett., 13, 115001, https://doi.org/10.1088/1748-9326/aae471, 2018.
Jones, B. M., Grosse, G., Farquharson, L. M., Roy-Léveillée, P., Veremeeva, A., Kanevskiy, M. Z., Gaglioti, B. V., Breen, A. L., Parsekian, A. D., Ulrich, M., and Hinkel, K. M.: Lake and drained lake basin systems in lowland permafrost regions, Nat. Rev. Earth Environ., 3, 85–98, https://doi.org/10.1038/s43017-021-00238-9, 2022.
Jones, M. C., Grosse, G., Jones, B. M., and Walter Anthony, K.: Peat accumulation in drained thermokarst lake basins in continuous, ice-rich permafrost, northern Seward Peninsula, Alaska, J. Geophys. Res., 117, 2011JG001766, https://doi.org/10.1029/2011JG001766, 2012.
Jongejans, L. L.: Organic matter stored in ice-rich permafrost: future permafrost thaw and greenhouse gas release, Universität Potsdam, https://doi.org/10.25932/PUBLISHUP-56491, 2022.
Jongejans, L. L., Strauss, J., Lenz, J., Peterse, F., Mangelsdorf, K., Fuchs, M., and Grosse, G.: Organic matter characteristics in yedoma and thermokarst deposits on Baldwin Peninsula, west Alaska, Biogeosciences, 15, 6033–6048, https://doi.org/10.5194/bg-15-6033-2018, 2018.
Jongejans, L. L., Mangelsdorf, K., Schirrmeister, L., Grigoriev, M. N., Maksimov, G. M., Biskaborn, B. K., Grosse, G., and Strauss, J.: n-Alkane Characteristics of Thawed Permafrost Deposits Below a Thermokarst Lake on Bykovsky Peninsula, Northeastern Siberia, Front. Environ. Sci., 8, 118, https://doi.org/10.3389/fenvs.2020.00118, 2020.
Jongejans, L. L., Liebner, S., Knoblauch, C., Mangelsdorf, K., Ulrich, M., Grosse, G., Tanski, G., Fedorov, A. N., Konstantinov, P. Ya., Windirsch, T., Wiedmann, J., and Strauss, J.: Greenhouse gas production and lipid biomarker distribution in Yedoma and Alas thermokarst lake sediments in Eastern Siberia, Global Change Biol., 27, 2822–2839, https://doi.org/10.1111/gcb.15566, 2021.
Jonsson, S., Andersson, A., Nilsson, M. B., Skyllberg, U., Lundberg, E., Schaefer, J. K., Åkerblom, S., and Björn, E.: Terrestrial discharges mediate trophic shifts and enhance methylmercury accumulation in estuarine biota, Sci. Adv., 3, e1601239, https://doi.org/10.1126/sciadv.1601239, 2017.
Jorgenson, M. T. and Grunblatt, J.: Landscape-Level Ecological Mapping of northern Alaska and Field Site Photography, Arctic Landscape Conservation Cooperative, U. S. Fish and Wildlife Service, Fairbanks, Alaska, 2013.
Jorgenson, M. T. and Shur, Y.: Evolution of lakes and basins in northern Alaska and discussion of the thaw lake cycle, J. Geophys. Res., 112, 2006JF000531, https://doi.org/10.1029/2006JF000531, 2007.
Jorgenson, M. T., Shur, Y., Osterkamp, T., Ping, C.-L., and Kanevskiy, M.: Part 1: Environment of the Beaufort Coastal Plain, in: Coastal Region of Northern Alaska – Guidebook to Permafrost and related features, Guidebook 10-1, edited by: Jorgenson, M. T., Division of Geological & Geophysical Surveys, 1–39, 2011.
Kokelj, S. V. and Jorgenson, M. T.: Advances in Thermokarst Research, Permafrost Periglac., 24, 108–119, https://doi.org/10.1002/ppp.1779, 2013.
Lenz, J., Jones, B. M., Wetterich, S., Tjallingii, R., Fritz, M., Arp, C. D., Rudaya, N., and Grosse, G.: Impacts of shore expansion and catchment characteristics on lacustrine thermokarst records in permafrost lowlands, Alaska Arctic Coastal Plain, Arktos, 2, 25, https://doi.org/10.1007/s41063-016-0025-0, 2016.
Marzi, R., Torkelson, B. E., and Olson, R. K.: A revised carbon preference index, Org. Geochem., 20, 1303–1306, https://doi.org/10.1016/0146-6380(93)90016-5, 1993.
Meyers, P. A.: Organic geochemical proxies of paleoceanographic, paleolimnologic, and paleoclimatic processes, Org. Geochem., 27, 213–250, https://doi.org/10.1016/S0146-6380(97)00049-1, 1997.
Miner, K. R., Turetsky, M. R., Malina, E., Bartsch, A., Tamminen, J., McGuire, A. D., Fix, A., Sweeney, C., Elder, C. D., and Miller, C. E.: Permafrost carbon emissions in a changing Arctic, Nat. Rev. Earth Environ., 3, 55–67, https://doi.org/10.1038/s43017-021-00230-3, 2022.
Mishra, U., Hugelius, G., Shelef, E., Yang, Y., Strauss, J., Lupachev, A., Harden, J. W., Jastrow, J. D., Ping, C.-L., Riley, W. J., Schuur, E. A. G., Matamala, R., Siewert, M., Nave, L. E., Koven, C. D., Fuchs, M., Palmtag, J., Kuhry, P., Treat, C. C., Zubrzycki, S., Hoffman, F. M., Elberling, B., Camill, P., Veremeeva, A., and Orr, A.: Spatial heterogeneity and environmental predictors of permafrost region soil organic carbon stocks, Sci. Adv., 7, eaaz5236, https://doi.org/10.1126/sciadv.aaz5236, 2021.
Obrist, D., Agnan, Y., Jiskra, M., Olson, C. L., Colegrove, D. P., Hueber, J., Moore, C. W., Sonke, J. E., and Helmig, D.: Tundra uptake of atmospheric elemental mercury drives Arctic mercury pollution, Nature, 547, 201–204, https://doi.org/10.1038/nature22997, 2017.
Olefeldt, D., Goswami, S., Grosse, G., Hayes, D., Hugelius, G., Kuhry, P., McGuire, A. D., Romanovsky, V. E., Sannel, A. B. K., Schuur, E. A. G., and Turetsky, M. R.: Circumpolar distribution and carbon storage of thermokarst landscapes, Nat. Commun., 7, 13043, https://doi.org/10.1038/ncomms13043, 2016.
Poynter, J.: Molecular stratigraphy: The recognition of paleo-climate signals in organic geochemical data, School of Chemistry, University of Bristol, Bristol, 324 pp., 1989.
Poynter, J. and Eglinton, G.: 14. Molecular Composition of three Sediments from Hole 717C: The Bengal Fan, Proceedings of the Ocean Drilling Program, Scientific Results, 116, 155–161, 1990.
Radke, M., Willsch, H., and Welte, D. H.: Preparative hydrocarbon group type determination by automated medium pressure liquid chromatography, Anal. Chem., 52, 406–411, https://doi.org/10.1021/ac50053a009, 1980.
Rantanen, M., Karpechko, A. Yu., Lipponen, A., Nordling, K., Hyvärinen, O., Ruosteenoja, K., Vihma, T., and Laaksonen, A.: The Arctic has warmed nearly four times faster than the globe since 1979, Commun. Earth Environ., 3, 10, https://doi.org/10.1038/s43247-022-00498-3, 2022.
Routh, J., Hugelius, G., Kuhry, P., Filley, T., Tillman, P. K., Becher, M., and Crill, P.: Multi-proxy study of soil organic matter dynamics in permafrost peat deposits reveal vulnerability to climate change in the European Russian Arctic, Chem. Geol., 368, 104–117, https://doi.org/10.1016/j.chemgeo.2013.12.022, 2014.
Rutkowski, C., Lenz, J., Lang, A., Wolter, J., Mothes, S., Reemtsma, T., Grosse, G., Ulrich, M., Fuchs, M., Schirrmeister, L., Fedorov, A., Grigoriev, M., Lantuit, H., and Strauss, J.: Mercury in Sediment Core Samples From Deep Siberian Ice-Rich Permafrost, Front. Earth Sci., 9, 718153, https://doi.org/10.3389/feart.2021.718153, 2021.
Rydberg, J., Klaminder, J., Rosén, P., and Bindler, R.: Climate driven release of carbon and mercury from permafrost mires increases mercury loading to sub-arctic lakes, Sci. Total Environ., 408, 4778–4783, https://doi.org/10.1016/j.scitotenv.2010.06.056, 2010.
Schäfer, I. K., Lanny, V., Franke, J., Eglinton, T. I., Zech, M., Vysloužilová, B., and Zech, R.: Leaf waxes in litter and topsoils along a European transect, SOIL, 2, 551–564, https://doi.org/10.5194/soil-2-551-2016, 2016.
Schirrmeister, L., Grosse, G., Wetterich, S., Overduin, P. P., Strauss, J., Schuur, E. A. G., and Hubberten, H.-W.: Fossil organic matter characteristics in permafrost deposits of the northeast Siberian Arctic, J. Geophys. Res.-Biogeo., 116, G00M02, https://doi.org/10.1029/2011jg001647, 2011.
Schirrmeister, L., Grigoriev, M. N., Strauss, J., Grosse, G., Overduin, P. P., Kholodov, A., Guenther, F., and Hubberten, H.-W.: Sediment characteristics of a thermokarst lagoon in the northeastern Siberian Arctic (Ivashkina Lagoon, Bykovsky Peninsula), Arktos, 4, 1–16, https://doi.org/10.1007/s41063-018-0049-8, 2018.
Schuster, P. F., Schaefer, K. M., Aiken, G. R., Antweiler, R. C., Dewild, J. F., Gryziec, J. D., Gusmeroli, A., Hugelius, G., Jafarov, E., Krabbenhoft, D. P., Liu, L., Herman-Mercer, N., Mu, C., Roth, D. A., Schaefer, T., Striegl, R. G., Wickland, K. P., and Zhang, T.: Permafrost Stores a Globally Significant Amount of Mercury, Geophys. Res. Lett., 45, 1463–1471, https://doi.org/10.1002/2017GL075571, 2018.
Schuur, E. A. G. and Mack, M. C.: Ecological Response to Permafrost Thaw and Consequences for Local and Global Ecosystem Services, Annu. Rev. Ecol. Evol. S., 49, 279–301, https://doi.org/10.1146/annurev-ecolsys-121415-032349, 2018.
Schuur, E. A. G., Vogel, J. G., Crummer, K. G., Lee, H., Sickman, J. O., and Osterkamp, T. E.: The effect of permafrost thaw on old carbon release and net carbon exchange from tundra, Nature, 459, 556–559, https://doi.org/10.1038/nature08031, 2009.
Schuur, E. A. G., Abbott, B. W., Commane, R., Ernakovich, J., Euskirchen, E., Hugelius, G., Grosse, G., Jones, M., Koven, C., Leshyk, V., Lawrence, D., Loranty, M. M., Mauritz, M., Olefeldt, D., Natali, S., Rodenhizer, H., Salmon, V., Schädel, C., Strauss, J., Treat, C., and Turetsky, M.: Permafrost and Climate Change: Carbon Cycle Feedbacks From the Warming Arctic, Annu. Rev. Env. Resour., 47, 343–371, https://doi.org/10.1146/annurev-environ-012220-011847, 2022.
Smith, S. L., O'Neill, H. B., Isaksen, K., Noetzli, J., and Romanovsky, V. E.: The changing thermal state of permafrost, Nat. Rev. Earth Environ., 3, 10–23, https://doi.org/10.1038/s43017-021-00240-1, 2022.
Smith-Downey, N. V., Sunderland, E. M., and Jacob, D. J.: Anthropogenic impacts on global storage and emissions of mercury from terrestrial soils: Insights from a new global model, J. Geophys. Res., 115, 2009JG001124, https://doi.org/10.1029/2009JG001124, 2010.
Strauss, J., Schirrmeister, L., Grosse, G., Wetterich, S., Ulrich, M., Herzschuh, U., and Hubberten, H.: The deep permafrost carbon pool of the Yedoma region in Siberia and Alaska, Geophys. Res. Lett., 40, 6165–6170, https://doi.org/10.1002/2013GL058088, 2013.
Strauss, J., Schirrmeister, L., Mangelsdorf, K., Eichhorn, L., Wetterich, S., and Herzschuh, U.: Organic-matter quality of deep permafrost carbon – a study from Arctic Siberia, Biogeosciences, 12, 2227–2245, https://doi.org/10.5194/bg-12-2227-2015, 2015.
Strauss, J., Biasi, C., Sanders, T., Abbott, B. W., von Deimling, T. S., Voigt, C., Winkel, M., Marushchak, M. E., Kou, D., Fuchs, M., Horn, M. A., Jongejans, L. L., Liebner, S., Nitzbon, J., Schirrmeister, L., Walter Anthony, K., Yang, Y., Zubrzycki, S., Laboor, S., Treat, C., and Grosse, G.: A globally relevant stock of soil nitrogen in the Yedoma permafrost domain, Nat. Commun., 13, 6074, https://doi.org/10.1038/s41467-022-33794-9, 2022.
Strauss, J., Marushchak, M. E., Van Delden, L., Sanders, T., Biasi, C., Voigt, C., Jongejans, L. L., and Treat, C.: Potential nitrogen mobilisation from the Yedoma permafrost domain, Environ. Res. Lett., 19, 043002, https://doi.org/10.1088/1748-9326/ad3167, 2024.
Strauss, J., Fuchs, M., Hugelius, G., Miesner, F., Nitze, I., Opfergelt, S., Schuur, E., Treat, C., Turetsky, M., Yang, Y., and Grosse, G.: Organic matter storage and vulnerability in the permafrost domain, Encyclopedia of Quaternary Science, 3rd edn., Elsevier, https://doi.org/10.1016/B978-0-323-99931-1.00164-1, 2025.
Thomas, C. L., Jansen, B., Czerwiński, S., Gałka, M., Knorr, K.-H., van Loon, E. E., Egli, M., and Wiesenberg, G. L. B.: Comparison of paleobotanical and biomarker records of mountain peatland and forest ecosystem dynamics over the last 2600 years in central Germany, Biogeosciences, 20, 4893–4914, https://doi.org/10.5194/bg-20-4893-2023, 2023.
US Geological Survey: EarthExplorer, satellite image acquired in 2002, https://earthexplorer.usgs.gov/, last access: 1 November 2024.
Voigt, C., Marushchak, M. E., Abbott, B. W., Biasi, C., Elberling, B., Siciliano, S. D., Sonnentag, O., Stewart, K. J., Yang, Y., and Martikainen, P. J.: Nitrous oxide emissions from permafrost-affected soils, Nat. Rev. Earth Environ., 1, 420–434, https://doi.org/10.1038/s43017-020-0063-9, 2020.
Weintraub, M. N. and Schimel, J. P.: Nitrogen Cycling and the Spread of Shrubs Control Changes in the Carbon Balance of Arctic Tundra Ecosystems, BioScience, 55, 408, https://doi.org/10.1641/0006-3568(2005)055[0408:NCATSO]2.0.CO;2, 2005.
Wendler, G., Moore, B., and Galloway, K.: Strong Temperature Increase and Shrinking Sea Ice in Arctic Alaska, TOASCJ, 8, 7–15, https://doi.org/10.2174/1874282301408010007, 2014.
Wolter, J., Lantuit, H., Wetterich, S., Rethemeyer, J., and Fritz, M.: Climatic, geomorphologic and hydrologic perturbations as drivers for mid- to late Holocene development of ice-wedge polygons in the western Canadian Arctic, Permafrost Periglac., 29, 164–181, https://doi.org/10.1002/ppp.1977, 2018.
Wolter, J., Jones, B. M., Fuchs, M., Breen, A., Bussmann, I., Koch, B., Lenz, J., Myers-Smith, I. H., Sachs, T., Strauss, J., Nitze, I., and Grosse, G.: Post-drainage vegetation, microtopography and organic matter in Arctic drained lake basins, Environ. Res. Lett., 19, 045001, https://doi.org/10.1088/1748-9326/ad2eeb, 2024.
Zech, M., Buggle, B., Leiber, K., Marković, S., Glaser, B., Hambach, U., Huwe, B., Stevens, T., Sümegi, P., Wiesenberg, G., and Zöller, L.: Reconstructing Quaternary vegetation history in the Carpathian Basin, SE-Europe, using n-alkane biomarkers as molecular fossils: Problems and possible solutions, potential and limitations, E&G Quaternary Sci. J., 58, 148–155, https://doi.org/10.3285/eg.58.2.03, 2010.
Zheng, Y., Zhou, W., Meyers, P. A., and Xie, S.: Lipid biomarkers in the Zoigê-Hongyuan peat deposit: Indicators of Holocene climate changes in West China, Org. Geochem., 38, 1927–1940, https://doi.org/10.1016/j.orggeochem.2007.06.012, 2007.
Short summary
Climate warming causes permafrost to thaw, releasing greenhouse gases and affecting ecosystems. We studied sediments from Arctic coastal landscapes, including land, lakes, lagoons, and the ocean, finding that organic carbon storage and quality vary with landscape features and saltwater influence. Freshwater and land areas store more carbon, while saltwater reduces its quality. These findings improve predictions of Arctic responses to climate change and their impact on global carbon cycling.
Climate warming causes permafrost to thaw, releasing greenhouse gases and affecting ecosystems....
Altmetrics
Final-revised paper
Preprint