Articles | Volume 23, issue 10
https://doi.org/10.5194/bg-23-3347-2026
© Author(s) 2026. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/bg-23-3347-2026
© Author(s) 2026. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Sensitivity of a mechanistic photosynthesis model to tropical Andean species and environments
Sebastián González-Caro
CORRESPONDING AUTHOR
Faculty of Environment, Science and Economy, University of Exeter, Exeter, United Kingdom
Instituto de Biología, Universidad de Antioquia, Medellín, Colombia
Mirindi Eric Dusenge
Research School of Biology, Australian National University, Canberra, Australia
Zorayda Restrepo
COLTREE Corporation, Medellin, Colombia
Andrew J. F. Cox
Met Office, Exeter, United Kingdom
Ian P. Hartley
Faculty of Environment, Science and Economy, University of Exeter, Exeter, United Kingdom
Patrick Meir
School of Geosciences, University of Edinburgh, Edinburgh, United Kingdom
Adriana Sánchez
Department of Biological Sciences, Universidad del Rosario, Bogotá, Colombia
Daniel Ruiz-Carrascal
Sistema de Alertas Tempranas de Medellín y el Valle de Aburrá, SIATA, Medellin, Colombia
Lina M. Mercado
Faculty of Environment, Science and Economy, University of Exeter, Exeter, United Kingdom
UK Centre for Ecology and Hydrology, Crowmarsh-Gifford, Wallingford, United Kingdom
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Joao Henrique Fernandes Amaral, Santiago Botía, Paula Torres Quintero, Anghy Sthephany Gutierrez Rincon, David Ho, Adriana Sanchez, Alvaro Avila-Diaz, Antje Uhde, Benjamin Quesada, Juan C. Benavides, R. Scott Winton, Carlos A. Sierra, Miguel A. Navarro-Ramírez, Diego David Pardo Buitrago, and Stijn Hantson
EGUsphere, https://doi.org/10.5194/egusphere-2026-2080, https://doi.org/10.5194/egusphere-2026-2080, 2026
This preprint is open for discussion and under review for Biogeosciences (BG).
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Methane is a powerful greenhouse gas driving climate change. Atmospheric methane levels are rising by anthropogenic emissions from livestock, oil and gas, rice farms, fires, and, naturally, mainly from wetlands. Tropical wetlands are a major source, yet data is uncertain. Our study examines South America's Orinoco wetlands (Colombia, Venezuela), reviewing emissions from natural and anthropogenic sources. We discuss and identify research needed to better understand this ecosystem's methane cycle.
Jessica Stacey, Richard Betts, Andrew Hartley, Lina Mercado, and Nicola Gedney
EGUsphere, https://doi.org/10.5194/egusphere-2025-51, https://doi.org/10.5194/egusphere-2025-51, 2025
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Plants typically transpire less with rising atmospheric carbon dioxide, leaving more water in the ground for human use, but many future water scarcity assessments ignore this effect. We use a land surface model to examine how plant responses to carbon dioxide and climate change affect future water scarcity. Our results suggest that including these plant responses increases overall water availability for most people, highlighting the importance of their inclusion in future water scarcity studies.
Yimian Ma, Xu Yue, Stephen Sitch, Nadine Unger, Johan Uddling, Lina M. Mercado, Cheng Gong, Zhaozhong Feng, Huiyi Yang, Hao Zhou, Chenguang Tian, Yang Cao, Yadong Lei, Alexander W. Cheesman, Yansen Xu, and Maria Carolina Duran Rojas
Geosci. Model Dev., 16, 2261–2276, https://doi.org/10.5194/gmd-16-2261-2023, https://doi.org/10.5194/gmd-16-2261-2023, 2023
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Plants have been found to respond differently to O3, but the variations in the sensitivities have rarely been explained nor fully implemented in large-scale assessment. This study proposes a new O3 damage scheme with leaf mass per area to unify varied sensitivities for all plant species. Our assessment reveals an O3-induced reduction of 4.8 % in global GPP, with the highest reduction of >10 % for cropland, suggesting an emerging risk of crop yield loss under the threat of O3 pollution.
Flossie Brown, Gerd A. Folberth, Stephen Sitch, Susanne Bauer, Marijn Bauters, Pascal Boeckx, Alexander W. Cheesman, Makoto Deushi, Inês Dos Santos Vieira, Corinne Galy-Lacaux, James Haywood, James Keeble, Lina M. Mercado, Fiona M. O'Connor, Naga Oshima, Kostas Tsigaridis, and Hans Verbeeck
Atmos. Chem. Phys., 22, 12331–12352, https://doi.org/10.5194/acp-22-12331-2022, https://doi.org/10.5194/acp-22-12331-2022, 2022
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Surface ozone can decrease plant productivity and impair human health. In this study, we evaluate the change in surface ozone due to climate change over South America and Africa using Earth system models. We find that if the climate were to change according to the worst-case scenario used here, models predict that forested areas in biomass burning locations and urban populations will be at increasing risk of ozone exposure, but other areas will experience a climate benefit.
Rebecca J. Oliver, Lina M. Mercado, Doug B. Clark, Chris Huntingford, Christopher M. Taylor, Pier Luigi Vidale, Patrick C. McGuire, Markus Todt, Sonja Folwell, Valiyaveetil Shamsudheen Semeena, and Belinda E. Medlyn
Geosci. Model Dev., 15, 5567–5592, https://doi.org/10.5194/gmd-15-5567-2022, https://doi.org/10.5194/gmd-15-5567-2022, 2022
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We introduce new representations of plant physiological processes into a land surface model. Including new biological understanding improves modelled carbon and water fluxes for the present in tropical and northern-latitude forests. Future climate simulations demonstrate the sensitivity of photosynthesis to temperature is important for modelling carbon cycle dynamics in a warming world. Accurate representation of these processes in models is necessary for robust predictions of climate change.
Mahdi André Nakhavali, Lina M. Mercado, Iain P. Hartley, Stephen Sitch, Fernanda V. Cunha, Raffaello di Ponzio, Laynara F. Lugli, Carlos A. Quesada, Kelly M. Andersen, Sarah E. Chadburn, Andy J. Wiltshire, Douglas B. Clark, Gyovanni Ribeiro, Lara Siebert, Anna C. M. Moraes, Jéssica Schmeisk Rosa, Rafael Assis, and José L. Camargo
Geosci. Model Dev., 15, 5241–5269, https://doi.org/10.5194/gmd-15-5241-2022, https://doi.org/10.5194/gmd-15-5241-2022, 2022
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In tropical ecosystems, the availability of rock-derived elements such as P can be very low. Thus, without a representation of P cycling, tropical forest responses to rising atmospheric CO2 conditions in areas such as Amazonia remain highly uncertain. We introduced P dynamics and its interactions with the N and P cycles into the JULES model. Our results highlight the potential for high P limitation and therefore lower CO2 fertilization capacity in the Amazon forest with low-fertility soils.
Mathilda Hancock, Stephen Sitch, Fabian Jörg Fischer, Jérôme Chave, Michael O'Sullivan, Dominic Fawcett, and Lina María Mercado
Biogeosciences Discuss., https://doi.org/10.5194/bg-2022-87, https://doi.org/10.5194/bg-2022-87, 2022
Publication in BG not foreseen
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Global vegetation models often underestimate the spatial variability of carbon stored in the Amazon forest. This paper demonstrates that including spatially varying tree mortality rates, as opposed to a homogeneous rate, in one model, significantly improves its simulations of the forest carbon store. To overcome the limited resolution of tree mortality data, this research presents a simple method of calculating mortality rates across Amazonia using a dependence on wood density.
Chandan Sarangi, TC Chakraborty, Sachchidanand Tripathi, Mithun Krishnan, Ross Morrison, Jonathan Evans, and Lina M. Mercado
Atmos. Chem. Phys., 22, 3615–3629, https://doi.org/10.5194/acp-22-3615-2022, https://doi.org/10.5194/acp-22-3615-2022, 2022
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Transpiration fluxes by vegetation are reduced under heat stress to conserve water. However, in situ observations over northern India show that the strength of the inverse association between transpiration and atmospheric vapor pressure deficit is weakening in the presence of heavy aerosol loading. This finding not only implicates the significant role of aerosols in modifying the evaporative fraction (EF) but also warrants an in-depth analysis of the aerosol–plant–temperature–EF continuum.
Christopher R. Taylor, Victoria Janes-Bassett, Gareth K. Phoenix, Ben Keane, Iain P. Hartley, and Jessica A. C. Davies
Biogeosciences, 18, 4021–4037, https://doi.org/10.5194/bg-18-4021-2021, https://doi.org/10.5194/bg-18-4021-2021, 2021
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We used experimental data to model two phosphorus-limited grasslands and investigated their response to nitrogen (N) deposition. Greater uptake of organic P facilitated a positive response to N deposition, stimulating growth and soil carbon storage. Where organic P access was less, N deposition exacerbated P demand and reduced plant C input to the soil. This caused more C to be released into the atmosphere than is taken in, reducing the climate-mitigation capacity of the modelled grassland.
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Short summary
Andean tropical montane forests are highly biodiverse and store carbon at levels comparable to lowland forests, yet their response to climate change remains uncertain. Using a leaf-level photosynthesis model and a transplant experiment across three elevations (14, 22 and 26 °C) in the tropical Andes, we show that intraspecific variability in key photosynthetic parameters is essential to accurately model photosynthesis and avoid underestimating montane forest carbon uptake.
Andean tropical montane forests are highly biodiverse and store carbon at levels comparable to...
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