Articles | Volume 20, issue 22
https://doi.org/10.5194/bg-20-4527-2023
© Author(s) 2023. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/bg-20-4527-2023
© Author(s) 2023. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Research article
| 
24 Nov 2023
Research article |
| 24 Nov 2023
| 24 Nov 2023
Assessing impacts of coastal warming, acidification, and deoxygenation on Pacific oyster (Crassostrea gigas) farming: a case study in the Hinase area, Okayama Prefecture, and Shizugawa Bay, Miyagi Prefecture, Japan
Masahiko Fujii
CORRESPONDING AUTHOR
International Coastal Research Center, Atmosphere and Ocean Research Institute, The University of Tokyo, Otsuchi, 0281102, Japan
Ryuji Hamanoue
Graduate School of Environmental Science, Hokkaido University, Sapporo, 0600810, Japan
Lawrence Patrick Cases Bernardo
International Coastal Research Center, Atmosphere and Ocean Research Institute, The University of Tokyo, Otsuchi, 0281102, Japan
Tsuneo Ono
Marine Environment Division, Fisheries Resources Institute, Japan Fisheries Research and Education Agency, Yokohama, 2368648, Japan
Akihiro Dazai
Center for Sustainable Society, Minamisanriku, 9860775, Japan
Shigeyuki Oomoto
Eight-Japan Engineering Consultants Inc., Okayama, 7008617, Japan
Masahide Wakita
Mutsu Institute for Oceanography, Japan Agency for Marine-Earth Science and Technology, Aomori, 0350022, Japan
Takehiro Tanaka
NPO Satoumi Research Institute, Okayama, 7048194, Japan
Related authors
Tsuneo Ono, Daisuke Muraoka, Masahiro Hayashi, Makiko Yorifuji, Akihiro Dazai, Shigeyuki Omoto, Takehiro Tanaka, Tomohiro Okamura, Goh Onitsuka, Kenji Sudo, Masahiko Fujii, Ryuji Hamanoue, and Masahide Wakita
Biogeosciences, 21, 177–199, https://doi.org/10.5194/bg-21-177-2024, https://doi.org/10.5194/bg-21-177-2024, 2024
Short summary
Short summary
We carried out parallel year-round observations of pH and related parameters in five stations around the Japan coast. It was found that short-term acidified situations with Omega_ar less than 1.5 occurred at four of five stations. Most of such short-term acidified events were related to the short-term low salinity event, and the extent of short-term pH drawdown at high freshwater input was positively correlated with the nutrient concentration of the main rivers that flow into the coastal area.
Y. Yara, M. Vogt, M. Fujii, H. Yamano, C. Hauri, M. Steinacher, N. Gruber, and Y. Yamanaka
Biogeosciences, 9, 4955–4968, https://doi.org/10.5194/bg-9-4955-2012, https://doi.org/10.5194/bg-9-4955-2012, 2012
Tatsuki Tokoro, Shin-Ichiro Nakaoka, Shintaro Takao, Shu Saito, Daisuke Sasano, Kazutaka Enyo, Masao Ishii, Naohiro Kosugi, Tsuneo Ono, Kazuaki Tadokoro, and Yukihiro Nojiri
EGUsphere, https://doi.org/10.5194/egusphere-2024-3792, https://doi.org/10.5194/egusphere-2024-3792, 2025
Short summary
Short summary
We studied how landwater from the mainland of Japan affects the ocean's carbon cycle using decades of Total Alkalinity (TA) data from the Northwest Pacific. Statistical analysis revealed landwater as a major TA source, reducing coastal acidification by 65 %, but with minimal impact on atmospheric CO2 absorption. Future work aims to refine results with depth-specific data and apply findings to global models.
Nico Lange, Björn Fiedler, Marta Álvarez, Alice Benoit-Cattin, Heather Benway, Pier Luigi Buttigieg, Laurent Coppola, Kim Currie, Susana Flecha, Dana S. Gerlach, Makio Honda, I. Emma Huertas, Siv K. Lauvset, Frank Muller-Karger, Arne Körtzinger, Kevin M. O'Brien, Sólveig R. Ólafsdóttir, Fernando C. Pacheco, Digna Rueda-Roa, Ingunn Skjelvan, Masahide Wakita, Angelicque White, and Toste Tanhua
Earth Syst. Sci. Data, 16, 1901–1931, https://doi.org/10.5194/essd-16-1901-2024, https://doi.org/10.5194/essd-16-1901-2024, 2024
Short summary
Short summary
The Synthesis Product for Ocean Time Series (SPOTS) is a novel achievement expanding and complementing the biogeochemical data landscape by providing consistent and high-quality biogeochemical time-series data from 12 ship-based fixed time-series programs. SPOTS covers multiple unique marine environments and time-series ranges, including data from 1983 to 2021. All in all, it facilitates a variety of applications that benefit from the collective value of biogeochemical time-series observations.
Christian Lønborg, Cátia Carreira, Gwenaël Abril, Susana Agustí, Valentina Amaral, Agneta Andersson, Javier Arístegui, Punyasloke Bhadury, Mariana B. Bif, Alberto V. Borges, Steven Bouillon, Maria Ll. Calleja, Luiz C. Cotovicz Jr., Stefano Cozzi, Maryló Doval, Carlos M. Duarte, Bradley Eyre, Cédric G. Fichot, E. Elena García-Martín, Alexandra Garzon-Garcia, Michele Giani, Rafael Gonçalves-Araujo, Renee Gruber, Dennis A. Hansell, Fuminori Hashihama, Ding He, Johnna M. Holding, William R. Hunter, J. Severino P. Ibánhez, Valeria Ibello, Shan Jiang, Guebuem Kim, Katja Klun, Piotr Kowalczuk, Atsushi Kubo, Choon-Weng Lee, Cláudia B. Lopes, Federica Maggioni, Paolo Magni, Celia Marrase, Patrick Martin, S. Leigh McCallister, Roisin McCallum, Patricia M. Medeiros, Xosé Anxelu G. Morán, Frank E. Muller-Karger, Allison Myers-Pigg, Marit Norli, Joanne M. Oakes, Helena Osterholz, Hyekyung Park, Maria Lund Paulsen, Judith A. Rosentreter, Jeff D. Ross, Digna Rueda-Roa, Chiara Santinelli, Yuan Shen, Eva Teira, Tinkara Tinta, Guenther Uher, Masahide Wakita, Nicholas Ward, Kenta Watanabe, Yu Xin, Youhei Yamashita, Liyang Yang, Jacob Yeo, Huamao Yuan, Qiang Zheng, and Xosé Antón Álvarez-Salgado
Earth Syst. Sci. Data, 16, 1107–1119, https://doi.org/10.5194/essd-16-1107-2024, https://doi.org/10.5194/essd-16-1107-2024, 2024
Short summary
Short summary
In this paper, we present the first edition of a global database compiling previously published and unpublished measurements of dissolved organic matter (DOM) collected in coastal waters (CoastDOM v1). Overall, the CoastDOM v1 dataset will be useful to identify global spatial and temporal patterns and to facilitate reuse in studies aimed at better characterizing local biogeochemical processes and identifying a baseline for modelling future changes in coastal waters.
Tsuneo Ono, Daisuke Muraoka, Masahiro Hayashi, Makiko Yorifuji, Akihiro Dazai, Shigeyuki Omoto, Takehiro Tanaka, Tomohiro Okamura, Goh Onitsuka, Kenji Sudo, Masahiko Fujii, Ryuji Hamanoue, and Masahide Wakita
Biogeosciences, 21, 177–199, https://doi.org/10.5194/bg-21-177-2024, https://doi.org/10.5194/bg-21-177-2024, 2024
Short summary
Short summary
We carried out parallel year-round observations of pH and related parameters in five stations around the Japan coast. It was found that short-term acidified situations with Omega_ar less than 1.5 occurred at four of five stations. Most of such short-term acidified events were related to the short-term low salinity event, and the extent of short-term pH drawdown at high freshwater input was positively correlated with the nutrient concentration of the main rivers that flow into the coastal area.
Pierre Friedlingstein, Michael O'Sullivan, Matthew W. Jones, Robbie M. Andrew, Luke Gregor, Judith Hauck, Corinne Le Quéré, Ingrid T. Luijkx, Are Olsen, Glen P. Peters, Wouter Peters, Julia Pongratz, Clemens Schwingshackl, Stephen Sitch, Josep G. Canadell, Philippe Ciais, Robert B. Jackson, Simone R. Alin, Ramdane Alkama, Almut Arneth, Vivek K. Arora, Nicholas R. Bates, Meike Becker, Nicolas Bellouin, Henry C. Bittig, Laurent Bopp, Frédéric Chevallier, Louise P. Chini, Margot Cronin, Wiley Evans, Stefanie Falk, Richard A. Feely, Thomas Gasser, Marion Gehlen, Thanos Gkritzalis, Lucas Gloege, Giacomo Grassi, Nicolas Gruber, Özgür Gürses, Ian Harris, Matthew Hefner, Richard A. Houghton, George C. Hurtt, Yosuke Iida, Tatiana Ilyina, Atul K. Jain, Annika Jersild, Koji Kadono, Etsushi Kato, Daniel Kennedy, Kees Klein Goldewijk, Jürgen Knauer, Jan Ivar Korsbakken, Peter Landschützer, Nathalie Lefèvre, Keith Lindsay, Junjie Liu, Zhu Liu, Gregg Marland, Nicolas Mayot, Matthew J. McGrath, Nicolas Metzl, Natalie M. Monacci, David R. Munro, Shin-Ichiro Nakaoka, Yosuke Niwa, Kevin O'Brien, Tsuneo Ono, Paul I. Palmer, Naiqing Pan, Denis Pierrot, Katie Pocock, Benjamin Poulter, Laure Resplandy, Eddy Robertson, Christian Rödenbeck, Carmen Rodriguez, Thais M. Rosan, Jörg Schwinger, Roland Séférian, Jamie D. Shutler, Ingunn Skjelvan, Tobias Steinhoff, Qing Sun, Adrienne J. Sutton, Colm Sweeney, Shintaro Takao, Toste Tanhua, Pieter P. Tans, Xiangjun Tian, Hanqin Tian, Bronte Tilbrook, Hiroyuki Tsujino, Francesco Tubiello, Guido R. van der Werf, Anthony P. Walker, Rik Wanninkhof, Chris Whitehead, Anna Willstrand Wranne, Rebecca Wright, Wenping Yuan, Chao Yue, Xu Yue, Sönke Zaehle, Jiye Zeng, and Bo Zheng
Earth Syst. Sci. Data, 14, 4811–4900, https://doi.org/10.5194/essd-14-4811-2022, https://doi.org/10.5194/essd-14-4811-2022, 2022
Short summary
Short summary
The Global Carbon Budget 2022 describes the datasets and methodology used to quantify the anthropogenic emissions of carbon dioxide (CO2) and their partitioning among the atmosphere, the land ecosystems, and the ocean. These living datasets are updated every year to provide the highest transparency and traceability in the reporting of CO2, the key driver of climate change.
Pierre Friedlingstein, Matthew W. Jones, Michael O'Sullivan, Robbie M. Andrew, Dorothee C. E. Bakker, Judith Hauck, Corinne Le Quéré, Glen P. Peters, Wouter Peters, Julia Pongratz, Stephen Sitch, Josep G. Canadell, Philippe Ciais, Rob B. Jackson, Simone R. Alin, Peter Anthoni, Nicholas R. Bates, Meike Becker, Nicolas Bellouin, Laurent Bopp, Thi Tuyet Trang Chau, Frédéric Chevallier, Louise P. Chini, Margot Cronin, Kim I. Currie, Bertrand Decharme, Laique M. Djeutchouang, Xinyu Dou, Wiley Evans, Richard A. Feely, Liang Feng, Thomas Gasser, Dennis Gilfillan, Thanos Gkritzalis, Giacomo Grassi, Luke Gregor, Nicolas Gruber, Özgür Gürses, Ian Harris, Richard A. Houghton, George C. Hurtt, Yosuke Iida, Tatiana Ilyina, Ingrid T. Luijkx, Atul Jain, Steve D. Jones, Etsushi Kato, Daniel Kennedy, Kees Klein Goldewijk, Jürgen Knauer, Jan Ivar Korsbakken, Arne Körtzinger, Peter Landschützer, Siv K. Lauvset, Nathalie Lefèvre, Sebastian Lienert, Junjie Liu, Gregg Marland, Patrick C. McGuire, Joe R. Melton, David R. Munro, Julia E. M. S. Nabel, Shin-Ichiro Nakaoka, Yosuke Niwa, Tsuneo Ono, Denis Pierrot, Benjamin Poulter, Gregor Rehder, Laure Resplandy, Eddy Robertson, Christian Rödenbeck, Thais M. Rosan, Jörg Schwinger, Clemens Schwingshackl, Roland Séférian, Adrienne J. Sutton, Colm Sweeney, Toste Tanhua, Pieter P. Tans, Hanqin Tian, Bronte Tilbrook, Francesco Tubiello, Guido R. van der Werf, Nicolas Vuichard, Chisato Wada, Rik Wanninkhof, Andrew J. Watson, David Willis, Andrew J. Wiltshire, Wenping Yuan, Chao Yue, Xu Yue, Sönke Zaehle, and Jiye Zeng
Earth Syst. Sci. Data, 14, 1917–2005, https://doi.org/10.5194/essd-14-1917-2022, https://doi.org/10.5194/essd-14-1917-2022, 2022
Short summary
Short summary
The Global Carbon Budget 2021 describes the data sets and methodology used to quantify the emissions of carbon dioxide and their partitioning among the atmosphere, land, and ocean. These living data are updated every year to provide the highest transparency and traceability in the reporting of CO2, the key driver of climate change.
Sayaka Yasunaka, Tsuneo Ono, Kosei Sasaoka, and Kanako Sato
Ocean Sci., 18, 255–268, https://doi.org/10.5194/os-18-255-2022, https://doi.org/10.5194/os-18-255-2022, 2022
Short summary
Short summary
Chlorophyll a (Chl a), which is the primary pigment used in photosynthesis, often retains its maximum value in the subsurface layer rather that at the surface. In this study, we integrate Chl a concentration data from recent biogeochemical floats, as well as from historical ship-based and other observations, and present global maps of subsurface Chl a concentration and seasonal and interannual variations with related variables, i.e., light intensity, nitrate concentration, and oxygen production.
Pierre Friedlingstein, Michael O'Sullivan, Matthew W. Jones, Robbie M. Andrew, Judith Hauck, Are Olsen, Glen P. Peters, Wouter Peters, Julia Pongratz, Stephen Sitch, Corinne Le Quéré, Josep G. Canadell, Philippe Ciais, Robert B. Jackson, Simone Alin, Luiz E. O. C. Aragão, Almut Arneth, Vivek Arora, Nicholas R. Bates, Meike Becker, Alice Benoit-Cattin, Henry C. Bittig, Laurent Bopp, Selma Bultan, Naveen Chandra, Frédéric Chevallier, Louise P. Chini, Wiley Evans, Liesbeth Florentie, Piers M. Forster, Thomas Gasser, Marion Gehlen, Dennis Gilfillan, Thanos Gkritzalis, Luke Gregor, Nicolas Gruber, Ian Harris, Kerstin Hartung, Vanessa Haverd, Richard A. Houghton, Tatiana Ilyina, Atul K. Jain, Emilie Joetzjer, Koji Kadono, Etsushi Kato, Vassilis Kitidis, Jan Ivar Korsbakken, Peter Landschützer, Nathalie Lefèvre, Andrew Lenton, Sebastian Lienert, Zhu Liu, Danica Lombardozzi, Gregg Marland, Nicolas Metzl, David R. Munro, Julia E. M. S. Nabel, Shin-Ichiro Nakaoka, Yosuke Niwa, Kevin O'Brien, Tsuneo Ono, Paul I. Palmer, Denis Pierrot, Benjamin Poulter, Laure Resplandy, Eddy Robertson, Christian Rödenbeck, Jörg Schwinger, Roland Séférian, Ingunn Skjelvan, Adam J. P. Smith, Adrienne J. Sutton, Toste Tanhua, Pieter P. Tans, Hanqin Tian, Bronte Tilbrook, Guido van der Werf, Nicolas Vuichard, Anthony P. Walker, Rik Wanninkhof, Andrew J. Watson, David Willis, Andrew J. Wiltshire, Wenping Yuan, Xu Yue, and Sönke Zaehle
Earth Syst. Sci. Data, 12, 3269–3340, https://doi.org/10.5194/essd-12-3269-2020, https://doi.org/10.5194/essd-12-3269-2020, 2020
Short summary
Short summary
The Global Carbon Budget 2020 describes the data sets and methodology used to quantify the emissions of carbon dioxide and their partitioning among the atmosphere, land, and ocean. These living data are updated every year to provide the highest transparency and traceability in the reporting of CO2, the key driver of climate change.
Pierre Friedlingstein, Matthew W. Jones, Michael O'Sullivan, Robbie M. Andrew, Judith Hauck, Glen P. Peters, Wouter Peters, Julia Pongratz, Stephen Sitch, Corinne Le Quéré, Dorothee C. E. Bakker, Josep G. Canadell, Philippe Ciais, Robert B. Jackson, Peter Anthoni, Leticia Barbero, Ana Bastos, Vladislav Bastrikov, Meike Becker, Laurent Bopp, Erik Buitenhuis, Naveen Chandra, Frédéric Chevallier, Louise P. Chini, Kim I. Currie, Richard A. Feely, Marion Gehlen, Dennis Gilfillan, Thanos Gkritzalis, Daniel S. Goll, Nicolas Gruber, Sören Gutekunst, Ian Harris, Vanessa Haverd, Richard A. Houghton, George Hurtt, Tatiana Ilyina, Atul K. Jain, Emilie Joetzjer, Jed O. Kaplan, Etsushi Kato, Kees Klein Goldewijk, Jan Ivar Korsbakken, Peter Landschützer, Siv K. Lauvset, Nathalie Lefèvre, Andrew Lenton, Sebastian Lienert, Danica Lombardozzi, Gregg Marland, Patrick C. McGuire, Joe R. Melton, Nicolas Metzl, David R. Munro, Julia E. M. S. Nabel, Shin-Ichiro Nakaoka, Craig Neill, Abdirahman M. Omar, Tsuneo Ono, Anna Peregon, Denis Pierrot, Benjamin Poulter, Gregor Rehder, Laure Resplandy, Eddy Robertson, Christian Rödenbeck, Roland Séférian, Jörg Schwinger, Naomi Smith, Pieter P. Tans, Hanqin Tian, Bronte Tilbrook, Francesco N. Tubiello, Guido R. van der Werf, Andrew J. Wiltshire, and Sönke Zaehle
Earth Syst. Sci. Data, 11, 1783–1838, https://doi.org/10.5194/essd-11-1783-2019, https://doi.org/10.5194/essd-11-1783-2019, 2019
Short summary
Short summary
The Global Carbon Budget 2019 describes the data sets and methodology used to quantify the emissions of carbon dioxide and their partitioning among the atmosphere, land, and ocean. These living data are updated every year to provide the highest transparency and traceability in the reporting of CO2, the key driver of climate change.
Corinne Le Quéré, Robbie M. Andrew, Pierre Friedlingstein, Stephen Sitch, Judith Hauck, Julia Pongratz, Penelope A. Pickers, Jan Ivar Korsbakken, Glen P. Peters, Josep G. Canadell, Almut Arneth, Vivek K. Arora, Leticia Barbero, Ana Bastos, Laurent Bopp, Frédéric Chevallier, Louise P. Chini, Philippe Ciais, Scott C. Doney, Thanos Gkritzalis, Daniel S. Goll, Ian Harris, Vanessa Haverd, Forrest M. Hoffman, Mario Hoppema, Richard A. Houghton, George Hurtt, Tatiana Ilyina, Atul K. Jain, Truls Johannessen, Chris D. Jones, Etsushi Kato, Ralph F. Keeling, Kees Klein Goldewijk, Peter Landschützer, Nathalie Lefèvre, Sebastian Lienert, Zhu Liu, Danica Lombardozzi, Nicolas Metzl, David R. Munro, Julia E. M. S. Nabel, Shin-ichiro Nakaoka, Craig Neill, Are Olsen, Tsueno Ono, Prabir Patra, Anna Peregon, Wouter Peters, Philippe Peylin, Benjamin Pfeil, Denis Pierrot, Benjamin Poulter, Gregor Rehder, Laure Resplandy, Eddy Robertson, Matthias Rocher, Christian Rödenbeck, Ute Schuster, Jörg Schwinger, Roland Séférian, Ingunn Skjelvan, Tobias Steinhoff, Adrienne Sutton, Pieter P. Tans, Hanqin Tian, Bronte Tilbrook, Francesco N. Tubiello, Ingrid T. van der Laan-Luijkx, Guido R. van der Werf, Nicolas Viovy, Anthony P. Walker, Andrew J. Wiltshire, Rebecca Wright, Sönke Zaehle, and Bo Zheng
Earth Syst. Sci. Data, 10, 2141–2194, https://doi.org/10.5194/essd-10-2141-2018, https://doi.org/10.5194/essd-10-2141-2018, 2018
Short summary
Short summary
The Global Carbon Budget 2018 describes the data sets and methodology used to quantify the emissions of carbon dioxide and their partitioning among the atmosphere, land, and ocean. These living data are updated every year to provide the highest transparency and traceability in the reporting of CO2, the key driver of climate change.
Shinsuke Kawagucci, Akiko Makabe, Taketoshi Kodama, Yohei Matsui, Chisato Yoshikawa, Etsuro Ono, Masahide Wakita, Takuro Nunoura, Hiroshi Uchida, and Taichi Yokokawa
Ocean Sci., 14, 575–588, https://doi.org/10.5194/os-14-575-2018, https://doi.org/10.5194/os-14-575-2018, 2018
Short summary
Short summary
A full-depth-rated conductivity–temperature–depth profiler with
carousel~multiple sampling (CTD-CMS) system on the research vessel R/V Kaimei can illuminate the last frontier, i.e., the hadal zone, an oceanographic province deeper than 7000 m. A series of biogeochemical observations of hadal seawater at the Izu–Ogasawara and Mariana trenches revealed basically well-mixed hydrographic properties and a heterogeneous distribution of likely sediment-derived compounds.
Corinne Le Quéré, Robbie M. Andrew, Josep G. Canadell, Stephen Sitch, Jan Ivar Korsbakken, Glen P. Peters, Andrew C. Manning, Thomas A. Boden, Pieter P. Tans, Richard A. Houghton, Ralph F. Keeling, Simone Alin, Oliver D. Andrews, Peter Anthoni, Leticia Barbero, Laurent Bopp, Frédéric Chevallier, Louise P. Chini, Philippe Ciais, Kim Currie, Christine Delire, Scott C. Doney, Pierre Friedlingstein, Thanos Gkritzalis, Ian Harris, Judith Hauck, Vanessa Haverd, Mario Hoppema, Kees Klein Goldewijk, Atul K. Jain, Etsushi Kato, Arne Körtzinger, Peter Landschützer, Nathalie Lefèvre, Andrew Lenton, Sebastian Lienert, Danica Lombardozzi, Joe R. Melton, Nicolas Metzl, Frank Millero, Pedro M. S. Monteiro, David R. Munro, Julia E. M. S. Nabel, Shin-ichiro Nakaoka, Kevin O'Brien, Are Olsen, Abdirahman M. Omar, Tsuneo Ono, Denis Pierrot, Benjamin Poulter, Christian Rödenbeck, Joe Salisbury, Ute Schuster, Jörg Schwinger, Roland Séférian, Ingunn Skjelvan, Benjamin D. Stocker, Adrienne J. Sutton, Taro Takahashi, Hanqin Tian, Bronte Tilbrook, Ingrid T. van der Laan-Luijkx, Guido R. van der Werf, Nicolas Viovy, Anthony P. Walker, Andrew J. Wiltshire, and Sönke Zaehle
Earth Syst. Sci. Data, 8, 605–649, https://doi.org/10.5194/essd-8-605-2016, https://doi.org/10.5194/essd-8-605-2016, 2016
Short summary
Short summary
The Global Carbon Budget 2016 is the 11th annual update of emissions of carbon dioxide (CO2) and their partitioning among the atmosphere, land, and ocean. This data synthesis brings together measurements, statistical information, and analyses of model results in order to provide an assessment of the global carbon budget and their uncertainties for years 1959 to 2015, with a projection for year 2016.
Dorothee C. E. Bakker, Benjamin Pfeil, Camilla S. Landa, Nicolas Metzl, Kevin M. O'Brien, Are Olsen, Karl Smith, Cathy Cosca, Sumiko Harasawa, Stephen D. Jones, Shin-ichiro Nakaoka, Yukihiro Nojiri, Ute Schuster, Tobias Steinhoff, Colm Sweeney, Taro Takahashi, Bronte Tilbrook, Chisato Wada, Rik Wanninkhof, Simone R. Alin, Carlos F. Balestrini, Leticia Barbero, Nicholas R. Bates, Alejandro A. Bianchi, Frédéric Bonou, Jacqueline Boutin, Yann Bozec, Eugene F. Burger, Wei-Jun Cai, Robert D. Castle, Liqi Chen, Melissa Chierici, Kim Currie, Wiley Evans, Charles Featherstone, Richard A. Feely, Agneta Fransson, Catherine Goyet, Naomi Greenwood, Luke Gregor, Steven Hankin, Nick J. Hardman-Mountford, Jérôme Harlay, Judith Hauck, Mario Hoppema, Matthew P. Humphreys, Christopher W. Hunt, Betty Huss, J. Severino P. Ibánhez, Truls Johannessen, Ralph Keeling, Vassilis Kitidis, Arne Körtzinger, Alex Kozyr, Evangelia Krasakopoulou, Akira Kuwata, Peter Landschützer, Siv K. Lauvset, Nathalie Lefèvre, Claire Lo Monaco, Ansley Manke, Jeremy T. Mathis, Liliane Merlivat, Frank J. Millero, Pedro M. S. Monteiro, David R. Munro, Akihiko Murata, Timothy Newberger, Abdirahman M. Omar, Tsuneo Ono, Kristina Paterson, David Pearce, Denis Pierrot, Lisa L. Robbins, Shu Saito, Joe Salisbury, Reiner Schlitzer, Bernd Schneider, Roland Schweitzer, Rainer Sieger, Ingunn Skjelvan, Kevin F. Sullivan, Stewart C. Sutherland, Adrienne J. Sutton, Kazuaki Tadokoro, Maciej Telszewski, Matthias Tuma, Steven M. A. C. van Heuven, Doug Vandemark, Brian Ward, Andrew J. Watson, and Suqing Xu
Earth Syst. Sci. Data, 8, 383–413, https://doi.org/10.5194/essd-8-383-2016, https://doi.org/10.5194/essd-8-383-2016, 2016
Short summary
Short summary
Version 3 of the Surface Ocean CO2 Atlas (www.socat.info) has 14.5 million CO2 (carbon dioxide) values for the years 1957 to 2014 covering the global oceans and coastal seas. Version 3 is an update to version 2 with a longer record and 44 % more CO2 values. The CO2 measurements have been made on ships, fixed moorings and drifting buoys. SOCAT enables quantification of the ocean carbon sink and ocean acidification, as well as model evaluation, thus informing climate negotiations.
C. Le Quéré, R. Moriarty, R. M. Andrew, J. G. Canadell, S. Sitch, J. I. Korsbakken, P. Friedlingstein, G. P. Peters, R. J. Andres, T. A. Boden, R. A. Houghton, J. I. House, R. F. Keeling, P. Tans, A. Arneth, D. C. E. Bakker, L. Barbero, L. Bopp, J. Chang, F. Chevallier, L. P. Chini, P. Ciais, M. Fader, R. A. Feely, T. Gkritzalis, I. Harris, J. Hauck, T. Ilyina, A. K. Jain, E. Kato, V. Kitidis, K. Klein Goldewijk, C. Koven, P. Landschützer, S. K. Lauvset, N. Lefèvre, A. Lenton, I. D. Lima, N. Metzl, F. Millero, D. R. Munro, A. Murata, J. E. M. S. Nabel, S. Nakaoka, Y. Nojiri, K. O'Brien, A. Olsen, T. Ono, F. F. Pérez, B. Pfeil, D. Pierrot, B. Poulter, G. Rehder, C. Rödenbeck, S. Saito, U. Schuster, J. Schwinger, R. Séférian, T. Steinhoff, B. D. Stocker, A. J. Sutton, T. Takahashi, B. Tilbrook, I. T. van der Laan-Luijkx, G. R. van der Werf, S. van Heuven, D. Vandemark, N. Viovy, A. Wiltshire, S. Zaehle, and N. Zeng
Earth Syst. Sci. Data, 7, 349–396, https://doi.org/10.5194/essd-7-349-2015, https://doi.org/10.5194/essd-7-349-2015, 2015
Short summary
Short summary
Accurate assessment of anthropogenic carbon dioxide emissions and their redistribution among the atmosphere, ocean, and terrestrial biosphere is important to understand the global carbon cycle, support the development of climate policies, and project future climate change. We describe data sets and a methodology to quantify all major components of the global carbon budget, including their uncertainties, based on a range of data and models and their interpretation by a broad scientific community.
C. Le Quéré, G. P. Peters, R. J. Andres, R. M. Andrew, T. A. Boden, P. Ciais, P. Friedlingstein, R. A. Houghton, G. Marland, R. Moriarty, S. Sitch, P. Tans, A. Arneth, A. Arvanitis, D. C. E. Bakker, L. Bopp, J. G. Canadell, L. P. Chini, S. C. Doney, A. Harper, I. Harris, J. I. House, A. K. Jain, S. D. Jones, E. Kato, R. F. Keeling, K. Klein Goldewijk, A. Körtzinger, C. Koven, N. Lefèvre, F. Maignan, A. Omar, T. Ono, G.-H. Park, B. Pfeil, B. Poulter, M. R. Raupach, P. Regnier, C. Rödenbeck, S. Saito, J. Schwinger, J. Segschneider, B. D. Stocker, T. Takahashi, B. Tilbrook, S. van Heuven, N. Viovy, R. Wanninkhof, A. Wiltshire, and S. Zaehle
Earth Syst. Sci. Data, 6, 235–263, https://doi.org/10.5194/essd-6-235-2014, https://doi.org/10.5194/essd-6-235-2014, 2014
D. C. E. Bakker, B. Pfeil, K. Smith, S. Hankin, A. Olsen, S. R. Alin, C. Cosca, S. Harasawa, A. Kozyr, Y. Nojiri, K. M. O'Brien, U. Schuster, M. Telszewski, B. Tilbrook, C. Wada, J. Akl, L. Barbero, N. R. Bates, J. Boutin, Y. Bozec, W.-J. Cai, R. D. Castle, F. P. Chavez, L. Chen, M. Chierici, K. Currie, H. J. W. de Baar, W. Evans, R. A. Feely, A. Fransson, Z. Gao, B. Hales, N. J. Hardman-Mountford, M. Hoppema, W.-J. Huang, C. W. Hunt, B. Huss, T. Ichikawa, T. Johannessen, E. M. Jones, S. D. Jones, S. Jutterström, V. Kitidis, A. Körtzinger, P. Landschützer, S. K. Lauvset, N. Lefèvre, A. B. Manke, J. T. Mathis, L. Merlivat, N. Metzl, A. Murata, T. Newberger, A. M. Omar, T. Ono, G.-H. Park, K. Paterson, D. Pierrot, A. F. Ríos, C. L. Sabine, S. Saito, J. Salisbury, V. V. S. S. Sarma, R. Schlitzer, R. Sieger, I. Skjelvan, T. Steinhoff, K. F. Sullivan, H. Sun, A. J. Sutton, T. Suzuki, C. Sweeney, T. Takahashi, J. Tjiputra, N. Tsurushima, S. M. A. C. van Heuven, D. Vandemark, P. Vlahos, D. W. R. Wallace, R. Wanninkhof, and A. J. Watson
Earth Syst. Sci. Data, 6, 69–90, https://doi.org/10.5194/essd-6-69-2014, https://doi.org/10.5194/essd-6-69-2014, 2014
M. Wakita, S. Watanabe, M. Honda, A. Nagano, K. Kimoto, K. Matsumoto, M. Kitamura, K. Sasaki, H. Kawakami, T. Fujiki, K. Sasaoka, Y. Nakano, and A. Murata
Biogeosciences, 10, 7817–7827, https://doi.org/10.5194/bg-10-7817-2013, https://doi.org/10.5194/bg-10-7817-2013, 2013
H. Kaeriyama, D. Ambe, Y. Shimizu, K. Fujimoto, T. Ono, S. Yonezaki, Y. Kato, H. Matsunaga, H. Minami, S. Nakatsuka, and T. Watanabe
Biogeosciences, 10, 4287–4295, https://doi.org/10.5194/bg-10-4287-2013, https://doi.org/10.5194/bg-10-4287-2013, 2013
Y. Yara, M. Vogt, M. Fujii, H. Yamano, C. Hauri, M. Steinacher, N. Gruber, and Y. Yamanaka
Biogeosciences, 9, 4955–4968, https://doi.org/10.5194/bg-9-4955-2012, https://doi.org/10.5194/bg-9-4955-2012, 2012
Related subject area
Biogeochemistry: Coastal Ocean
Improved understanding of nitrate trends, eutrophication indicators, and risk areas using machine learning
Evaluating ocean alkalinity enhancement as a carbon dioxide removal strategy in the North Sea
Spring–neap tidal cycles modulate the strength of the carbon source at the estuary–coast interface
Spatiotemporal variations in surface marine carbonate system properties across the western Mediterranean Sea using volunteer observing ship data
Amplified bottom water acidification rates on the Bering Sea shelf from 1970–2022
Depositional controls and budget of organic carbon burial in fine-grained sediments of the North Sea – the Helgoland Mud Area as a natural laboratory
Effects of submarine groundwater on nutrient concentration and primary production in a deep bay of the Japan Sea
The bacteria–protist link as a main route of dissolved organic matter across contrasting productivity areas on the Patagonian Shelf
Ocean alkalinity enhancement (OAE) does not cause cellular stress in a phytoplankton community of the subtropical Atlantic Ocean
Reviews and syntheses: On increasing hypoxia in eastern boundary upwelling systems – zooplankton under metabolic stress
Zinc stimulation of phytoplankton in a low carbon dioxide, coastal Antarctic environment: evidence for the Zn hypothesis
Technical note: Testing a new approach for the determination of N2 fixation rates by coupling a membrane equilibrator to a mass spectrometer for long-term observations
A niche for diverse cable bacteria in continental margin sediments overlain by oxygen-deficient waters
Phytoplankton community succession and biogeochemistry in a bloom simulation experiment at an estuary-ocean interface
Long-term variations in pH in coastal waters along the Korean Peninsula
The effect of carbonate mineral additions on biogeochemical conditions in surface sediments and benthic–pelagic exchange fluxes
Estimation of Metabolic Dynamics of Restored Seagrass Meadows in a Southeast Asia Islet: Insights from Ex Situ Benthic Incubation
Assessing the impacts of simulated ocean alkalinity enhancement on viability and growth of nearshore species of phytoplankton
Human Activities Caused Hypoxia Expansion in a Large Eutrophic Estuary: Non-negligible Role of Riverine Suspended Sediments
Photosynthetic electron, carbon and oxygen fluxes within a mosaic of Fe limitation in the California Current Upwelling System
Responses of microbial metabolic rates to non-equilibrated silicate- versus calcium-based ocean alkalinity enhancement
High metabolic zinc demand within native Amundsen and Ross sea phytoplankton communities determined by stable isotope uptake rate measurements
The influence of zooplankton and oxygen on the particulate organic carbon flux in the Benguela Upwelling System
Reviews and syntheses: Biological indicators of low-oxygen stress in marine water-breathing animals
Temperature-enhanced effects of iron on Southern Ocean phytoplankton
Riverine nutrient impact on global ocean nitrogen cycle feedbacks and marine primary production in an Earth system model
The Northeast Greenland Shelf as a potential late-summer CO2 source to the atmosphere
Technical note: Ocean Alkalinity Enhancement Pelagic Impact Intercomparison Project (OAEPIIP)
Estimates of carbon sequestration potential in an expanding Arctic fjord (Hornsund, Svalbard) affected by dark plumes of glacial meltwater
An assessment of ocean alkalinity enhancement using aqueous hydroxides: kinetics, efficiency, and precipitation thresholds
Dissolved nitric oxide in the lower Elbe Estuary and the Port of Hamburg area
Variable contribution of wastewater treatment plant effluents to downstream nitrous oxide concentrations and emissions
Distribution of nutrients and dissolved organic matter in a eutrophic equatorial estuary: the Johor River and the East Johor Strait
Investigating the effect of silicate- and calcium-based ocean alkalinity enhancement on diatom silicification
Ocean alkalinity enhancement using sodium carbonate salts does not lead to measurable changes in Fe dynamics in a mesocosm experiment
Quantification and mitigation of bottom-trawling impacts on sedimentary organic carbon stocks in the North Sea
Influence of ocean alkalinity enhancement with olivine or steel slag on a coastal plankton community in Tasmania
Multi-model comparison of trends and controls of near-bed oxygen concentration on the northwest European continental shelf under climate change
Picoplanktonic methane production in eutrophic surface waters
Vertical mixing alleviates autumnal oxygen deficiency in the central North Sea
Hypoxia also occurs in small highly turbid estuaries: the example of the Charente (Bay of Biscay)
Seasonality and response of ocean acidification and hypoxia to major environmental anomalies in the southern Salish Sea, North America (2014–2018)
Oceanographic processes driving low-oxygen conditions inside Patagonian fjords
Above- and belowground plant mercury dynamics in a salt marsh estuary in Massachusetts, USA
Variability and drivers of carbonate chemistry at shellfish aquaculture sites in the Salish Sea, British Columbia
Unusual Hemiaulus bloom influences ocean productivity in Northeastern US Shelf waters
Insights into carbonate environmental conditions in the Chukchi Sea
UAV approaches for improved mapping of vegetation cover and estimation of carbon storage of small saltmarshes: examples from Loch Fleet, northeast Scotland
Iron “ore” nothing: benthic iron fluxes from the oxygen-deficient Santa Barbara Basin enhance phytoplankton productivity in surface waters
Marine anoxia initiates giant sulfur-oxidizing bacterial mat proliferation and associated changes in benthic nitrogen, sulfur, and iron cycling in the Santa Barbara Basin, California Borderland
Deep S. Banerjee and Jozef Skákala
Biogeosciences, 22, 3769–3784, https://doi.org/10.5194/bg-22-3769-2025, https://doi.org/10.5194/bg-22-3769-2025, 2025
Short summary
Short summary
Nitrate is a crucial nutrient in oceans, whose excess can trigger uncontrolled algae growth that damages marine ecosystems. We used machine learning to generate skilled, gap-free, bi-decadal surface nitrate data from sparse observations, revealing areas on the North-West European Shelf that are more vulnerable to excess algae growth if nutrient pollution occurs. We also looked at bi-decadal trends in coastal nitrate and the impact of winter nitrate on spring phytoplankton blooms.
Feifei Liu, Ute Daewel, Jan Kossack, Kubilay Timur Demir, Helmuth Thomas, and Corinna Schrum
Biogeosciences, 22, 3699–3719, https://doi.org/10.5194/bg-22-3699-2025, https://doi.org/10.5194/bg-22-3699-2025, 2025
Short summary
Short summary
Ocean alkalinity enhancement (OAE) boosts oceanic CO₂ absorption, offering a climate solution. Using a regional model, we examined OAE in the North Sea, revealing that shallow coastal areas achieve higher CO₂ uptake than offshore where alkalinity is more susceptible to deep-ocean loss. Long-term carbon storage is limited, and pH shifts vary by location. Our findings guide OAE deployment to optimize carbon removal while minimizing ecological effects, supporting global climate mitigation efforts.
Vlad A. Macovei, Louise C. V. Rewrie, Rüdiger Röttgers, and Yoana G. Voynova
Biogeosciences, 22, 3375–3396, https://doi.org/10.5194/bg-22-3375-2025, https://doi.org/10.5194/bg-22-3375-2025, 2025
Short summary
Short summary
We found that biogeochemical variability at the land–sea interface (LSI) in two major temperate estuaries is modulated by the 14 d spring–neap tidal cycle, with large effects on dissolved inorganic and organic carbon concentrations and distribution. As this effect increases the strength of the carbon source to the atmosphere by up to 74 % during spring tide, it should be accounted for in regional models, which aim to resolve biogeochemical processing at the LSI.
David Curbelo-Hernández, David González-Santana, Aridane G. González, J. Magdalena Santana-Casiano, and Melchor González-Dávila
Biogeosciences, 22, 3329–3356, https://doi.org/10.5194/bg-22-3329-2025, https://doi.org/10.5194/bg-22-3329-2025, 2025
Short summary
Short summary
This study offers a unique high-resolution dataset (2019–2024) on surface physicochemical properties in the western Mediterranean Sea. It reveals accelerated surface warming, significantly altering CO2 levels and pH. Currently a net CO2 sink, the region may become a CO2 source by 2030 due to weakening in-gassing. The research highlights the value of VOS (volunteer observing ship) lines for monitoring climate impacts and emphasizes the need for ongoing observations to enhance long-term trend accuracy and future projections.
Darren J. Pilcher, Jessica N. Cross, Natalie Monacci, Linquan Mu, Kelly A. Kearney, Albert J. Hermann, and Wei Cheng
Biogeosciences, 22, 3103–3125, https://doi.org/10.5194/bg-22-3103-2025, https://doi.org/10.5194/bg-22-3103-2025, 2025
Short summary
Short summary
The Bering Sea shelf is a highly productive marine ecosystem that is vulnerable to ocean acidification. We use a computational model to simulate the carbon cycle and acidification rates from 1970–2022. The results suggest that bottom water acidification rates are more than twice as great as surface rates. Bottom waters are also naturally more acidic. Thus these waters will pass key thresholds known to negatively impact marine organisms, such as red king crab, much sooner than surface waters.
Daniel Müller, Bo Liu, Walter Geibert, Moritz Holtappels, Lasse Sander, Elda Miramontes, Heidi Taubner, Susann Henkel, Kai-Uwe Hinrichs, Denise Bethke, Ingrid Dohrmann, and Sabine Kasten
Biogeosciences, 22, 2541–2567, https://doi.org/10.5194/bg-22-2541-2025, https://doi.org/10.5194/bg-22-2541-2025, 2025
Short summary
Short summary
Coastal and shelf sediments are the most important sinks for organic carbon (OC) on Earth. We produced a new high-resolution sediment and porewater data set from the Helgoland Mud Area (HMA), North Sea, to determine which depositional factors control the preservation of OC. The burial efficiency is highest in an area of high sedimentation and terrigenous OC. The HMA covers 0.09 % of the North Sea but accounts for 0.76 % of its OC accumulation, highlighting the importance of the depocentre.
Menghong Dong, Xinyu Guo, Takuya Matsuura, Taichi Tebakari, and Jing Zhang
Biogeosciences, 22, 2383–2402, https://doi.org/10.5194/bg-22-2383-2025, https://doi.org/10.5194/bg-22-2383-2025, 2025
Short summary
Short summary
Submarine groundwater discharge (SGD), a common coastal hydrological process that involves submarine inflow of groundwater into the sea, is associated with a large nutrient load. To clarify the distribution of SGD-derived nutrients after release at the bottom of the sea and their contribution to phytoplankton growth in the marine ecosystem, we modeled the SGD process in Toyama Bay using a specialized computer code that can distinguish SGD-derived nutrients from nutrients from other sources.
M. Celeste López-Abbate, John E. Garzón-Cardona, Ricardo Silva, Juan-Carlos Molinero, Laura A. Ruiz-Etcheverry, Ana M. Martínez, Azul S. Gilabert, and Rubén J. Lara
Biogeosciences, 22, 2309–2325, https://doi.org/10.5194/bg-22-2309-2025, https://doi.org/10.5194/bg-22-2309-2025, 2025
Short summary
Short summary
This study explores how microbial dynamics influence the dissolved organic matter (DOM) pool in the Patagonian Shelf. Despite high phytoplankton biomass, selective grazing on fast-growing bacteria led to DOM accumulation, likely due to reduced DOM-consuming bacteria and added egestion compounds. Experiments showed that bacteria not only acted as a carbon sink through mineralization but also transferred assimilated carbon dioxide (CO2) to higher trophic levels.
Librada Ramírez, Leonardo J. Pozzo-Pirotta, Aja Trebec, Víctor Manzanares-Vázquez, José L. Díez, Javier Arístegui, Ulf Riebesell, Stephen D. Archer, and María Segovia
Biogeosciences, 22, 1865–1886, https://doi.org/10.5194/bg-22-1865-2025, https://doi.org/10.5194/bg-22-1865-2025, 2025
Short summary
Short summary
We studied the potential effects of increasing ocean alkalinity on a natural plankton community in subtropical waters of the Atlantic near Gran Canaria, Spain. Alkalinity is the capacity of water to resist acidification, and plankton are usually microscopic plants (phytoplankton) and animals (zooplankton), often less than 2.5 cm in length. This study suggests that increasing ocean alkalinity did not have a significant negative impact on the plankton community studied.
Leissing Frederick, Mauricio A. Urbina, and Ruben Escribano
Biogeosciences, 22, 1839–1852, https://doi.org/10.5194/bg-22-1839-2025, https://doi.org/10.5194/bg-22-1839-2025, 2025
Short summary
Short summary
Evidence shows that due to global warming, zooplankton inhabiting the coastal upwelling zone are exposed to increasing hypoxia affecting their physiology, metabolism, and population dynamics. The adaptive responses of zooplankton to cope with mild/severe hypoxia may depend on trade-offs with other metabolic/energy demands, implying less energy for growth, feeding, and reproduction, with ecological consequences for the zooplankton population and the marine food web.
Riss M. Kell, Adam V. Subhas, Nicole L. Schanke, Lauren E. Lees, Rebecca J. Chmiel, Deepa Rao, Margaret M. Brisbin, Dawn M. Moran, Matthew R. McIlvin, Francesco Bolinesi, Olga Mangoni, Raffaella Casotti, Cecilia Balestra, Tristan Horner, Robert B. Dunbar, Andrew E. Allen, Giacomo R. DiTullio, and Mak A. Saito
EGUsphere, https://doi.org/10.1101/2023.11.05.565706, https://doi.org/10.1101/2023.11.05.565706, 2025
Short summary
Short summary
Photosynthetic productivity is strongly influenced by water column nutrient availability. Despite the importance of zinc, definitive evidence for oceanic zinc limitation of photosynthesis has been scarce. We applied multiple biogeochemical measurements to a field site in Terra Nova Bay, Antarctica, to demonstrate that the phytoplankton community was experiencing zinc limitation. This field evidence paves the way for future experimental studies to consider Zn as a limiting oceanic micronutrient.
Sören Iwe, Oliver Schmale, and Bernd Schneider
Biogeosciences, 22, 1767–1779, https://doi.org/10.5194/bg-22-1767-2025, https://doi.org/10.5194/bg-22-1767-2025, 2025
Short summary
Short summary
We present a novel method for quantifying N2 fixation by cyanobacteria, which is crucial in Baltic Sea eutrophication. Our Gas Equilibrium – Membrane-Inlet Mass Spectrometer (GE-MIMS), designed for operation on voluntary observing ships (VOSs), enables large-scale monitoring of surface water N2 depletion caused by N2 fixation. Laboratory tests confirm the device’s accuracy and precision, ensuring that it can complement current methods and contribute valuable data for better understanding N2 fixation in the Baltic Sea.
Caroline P. Slomp, Martijn Hermans, Niels A. G. M. van Helmond, Silke Severmann, James McManus, Marit R. van Erk, and Sairah Malkin
EGUsphere, https://doi.org/10.5194/egusphere-2025-817, https://doi.org/10.5194/egusphere-2025-817, 2025
Short summary
Short summary
Cable bacteria couple oxidation of sulfide at depth in sediments with reduction of oxygen, nitrate or nitrite near the sediment surface, thereby preventing release of toxic hydrogen sulfide to the overlying water. We show evidence for a diversity of cable bacteria in sediments from hypoxic and anoxic basins along the continental margin of California and Mexico. Cable bacteria activity in this setting is likely periodic and dependent on the supply of organic matter and/or oxygen.
Jenna Alyson Lee, Joseph H. Vineis, Mathieu A. Poupon, Laure Resplandy, and Bess B. Ward
EGUsphere, https://doi.org/10.5194/egusphere-2025-871, https://doi.org/10.5194/egusphere-2025-871, 2025
Short summary
Short summary
Concurrent sampling of environmental parameters, productivity rates, photopigments, and DNA were used to analyze a 24–L estuarine diatom bloom microcosm. Biogeochemical data and an ecological model indicated that the bloom was terminated by grazing. Comparisons to previous studies revealed (1) additional community and diversity complexity using 18S amplicon vs. traditional pigment–based analyses, and (2) a potential global productivity–diversity relationship using 18S and carbon transport rates.
Yong-Woo Lee, Mi-Ok Park, Seong-Gil Kim, Tae-Hoon Kim, Yong Hwa Oh, Sang Heon Lee, and DongJoo Joung
Biogeosciences, 22, 675–690, https://doi.org/10.5194/bg-22-675-2025, https://doi.org/10.5194/bg-22-675-2025, 2025
Short summary
Short summary
Long-term pH variation in coastal waters along the Korean Peninsula was assessed for the first time, and it exhibited no significant pH change over an 11-year period. This contrasts with the ongoing pH decline in open oceans and other coastal areas. Analysis of environmental data showed that pH is mainly controlled by dissolved oxygen in bottom waters. This suggests that ocean warming could cause a pH decline in Korean coastal waters, affecting many fish and seaweed aquaculture operations.
Kadir Biçe, Tristen Myers Stewart, George G. Waldbusser, and Christof Meile
Biogeosciences, 22, 641–657, https://doi.org/10.5194/bg-22-641-2025, https://doi.org/10.5194/bg-22-641-2025, 2025
Short summary
Short summary
We studied the effect of addition of carbonate minerals on coastal sediments. We carried out laboratory experiments to quantify the dissolution kinetics and integrated these observations into a numerical model that describes biogeochemical cycling in surficial sediments. Using the model, we demonstrate the buffering effect of the mineral additions and their duration. We quantify the effect under different environmental conditions and assess the potential for increased atmospheric CO2 uptake.
Mariche Bandibas Natividad, Jian-Jhih Chen, Hsin-Yu Chou, Lan-Feng Fan, Yi-Le Shen, and Wen-Chen Chou
EGUsphere, https://doi.org/10.5194/egusphere-2024-4000, https://doi.org/10.5194/egusphere-2024-4000, 2025
Short summary
Short summary
Seagrass restoration serves as a nature-based solution for CO2 removal. We examined the organic carbon and carbonate dynamics of restored seagrasses (SG) and bare sediments (BS) using ex situ core incubations. SG exhibited higher net ecosystem metabolism compared to BS, while no significant difference was observed in net ecosystem calcification. Consequently, SG demonstrated a significantly enhanced overall capacity for carbon uptake.
Jessica L. Oberlander, Mackenzie E. Burke, Cat A. London, and Hugh L. MacIntyre
Biogeosciences, 22, 499–512, https://doi.org/10.5194/bg-22-499-2025, https://doi.org/10.5194/bg-22-499-2025, 2025
Short summary
Short summary
Ocean alkalinity enhancement (OAE) is a promising negative emission technology that results in the net sequestration of atmospheric carbon. In this paper, we assess the potential impact of OAE on phytoplankton through an analysis of prior studies and the effects of simulated OAE on photosynthetic competence. Our findings suggest that there may be little if any significant impact on most phytoplankton studied to date if OAE is conducted in well-flushed, nearshore environments.
Yue Nan, Zheng Chen, Bin Wang, Bo Liang, and Jiatang Hu
EGUsphere, https://doi.org/10.5194/egusphere-2024-4013, https://doi.org/10.5194/egusphere-2024-4013, 2025
Short summary
Short summary
Human activities are changing the coastal water environment, but the role of suspended sediments in oxygen loss is not well understood. We used a model to compare dissolved oxygen levels and related factors in the 1990s and 2010s in the Pearl River Estuary. Reduced suspended sediments and increased pollution have expanded low-oxygen areas by 1.5 times. It highlights that declining suspended sediments increase hypoxia in estuaries, especially with rising nutrients, which need urgent attention.
Yayla Sezginer, Kate Schuler, Emily Speciale, Adrian Marchetti, Claire Till, Ralph Till, and Philippe Tortell
EGUsphere, https://doi.org/10.5194/egusphere-2024-3812, https://doi.org/10.5194/egusphere-2024-3812, 2025
Short summary
Short summary
We recorded three metrics of photosynthesis in the California Current. Real-time observations of microalgae physiology and productivity revealed signs of iron limitation where the continental shelf rapidly dropped off. Iron limitation influenced how efficiently light was absorbed and used for carbon fixation but did not appear to affect net photosynthetic oxygen production. Our results offer useful insights towards efforts to model carbon fixation rates from microalgae optical properties.
Laura Marín-Samper, Javier Arístegui, Nauzet Hernández-Hernández, and Ulf Riebesell
Biogeosciences, 21, 5707–5724, https://doi.org/10.5194/bg-21-5707-2024, https://doi.org/10.5194/bg-21-5707-2024, 2024
Short summary
Short summary
This study exposed a natural community to two non-CO2-equilibrated ocean alkalinity enhancement (OAE) deployments using different minerals. Adding alkalinity in this manner decreases dissolved CO2, essential for photosynthesis. While photosynthesis was not suppressed, bloom formation was mildly delayed, potentially impacting marine food webs. The study emphasizes the need for further research on OAE without prior equilibration and on its ecological implications.
Riss M. Kell, Rebecca J. Chmiel, Deepa Rao, Dawn M. Moran, Matthew R. McIlvin, Tristan J. Horner, Nicole L. Schanke, Ichiko Sugiyama, Robert B. Dunbar, Giacomo R. DiTullio, and Mak A. Saito
Biogeosciences, 21, 5685–5706, https://doi.org/10.5194/bg-21-5685-2024, https://doi.org/10.5194/bg-21-5685-2024, 2024
Short summary
Short summary
Despite interest in modeling the biogeochemical uptake and cycling of the trace metal zinc (Zn), measurements of Zn uptake in natural marine phytoplankton communities have not been conducted previously. To fill this gap, we employed a stable isotope uptake rate measurement method to quantify Zn uptake into natural phytoplankton assemblages within the Southern Ocean. Zn demand was high and rapid enough to depress the inventory of Zn available to phytoplankton on seasonal timescales.
Luisa Chiara Meiritz, Tim Rixen, Anja Karin van der Plas, Tarron Lamont, and Niko Lahajnar
Biogeosciences, 21, 5261–5276, https://doi.org/10.5194/bg-21-5261-2024, https://doi.org/10.5194/bg-21-5261-2024, 2024
Short summary
Short summary
Moored and drifting sediment trap experiments in the northern (nBUS) and southern (sBUS) Benguela Upwelling System showed that active carbon fluxes by vertically migrating zooplankton were about 3 times higher in the sBUS than in the nBUS. Despite these large variabilities, the mean passive particulate organic carbon (POC) fluxes were almost equal in the two subsystems. The more intense near-bottom oxygen minimum layer seems to lead to higher POC fluxes and accumulation rates in the nBUS.
Michael R. Roman, Andrew H. Altieri, Denise Breitburg, Erica M. Ferrer, Natalya D. Gallo, Shin-ichi Ito, Karin Limburg, Kenneth Rose, Moriaki Yasuhara, and Lisa A. Levin
Biogeosciences, 21, 4975–5004, https://doi.org/10.5194/bg-21-4975-2024, https://doi.org/10.5194/bg-21-4975-2024, 2024
Short summary
Short summary
Oxygen-depleted ocean waters have increased worldwide. In order to improve our understanding of the impacts of this oxygen loss on marine life it is essential that we develop reliable indicators that track the negative impacts of low oxygen. We review various indicators of low-oxygen stress for marine animals including their use, research needs, and application to confront the challenges of ocean oxygen loss.
Charlotte Eich, Mathijs van Manen, J. Scott P. McCain, Loay J. Jabre, Willem H. van de Poll, Jinyoung Jung, Sven B. E. H. Pont, Hung-An Tian, Indah Ardiningsih, Gert-Jan Reichart, Erin M. Bertrand, Corina P. D. Brussaard, and Rob Middag
Biogeosciences, 21, 4637–4663, https://doi.org/10.5194/bg-21-4637-2024, https://doi.org/10.5194/bg-21-4637-2024, 2024
Short summary
Short summary
Phytoplankton growth in the Southern Ocean (SO) is often limited by low iron (Fe) concentrations. Sea surface warming impacts Fe availability and can affect phytoplankton growth. We used shipboard Fe clean incubations to test how changes in Fe and temperature affect SO phytoplankton. Their abundances usually increased with Fe addition and temperature increase, with Fe being the major factor. These findings imply potential shifts in ecosystem structure, impacting food webs and elemental cycling.
Miriam Tivig, David P. Keller, and Andreas Oschlies
Biogeosciences, 21, 4469–4493, https://doi.org/10.5194/bg-21-4469-2024, https://doi.org/10.5194/bg-21-4469-2024, 2024
Short summary
Short summary
Marine biological production is highly dependent on the availability of nitrogen and phosphorus. Rivers are the main source of phosphorus to the oceans but poorly represented in global model oceans. We include dissolved nitrogen and phosphorus from river export in a global model ocean and find that the addition of riverine phosphorus affects marine biology on millennial timescales more than riverine nitrogen alone. Globally, riverine phosphorus input increases primary production rates.
Esdoorn Willcox, Marcos Lemes, Thomas Juul-Pedersen, Mikael Kristian Sejr, Johnna Marchiano Holding, and Søren Rysgaard
Biogeosciences, 21, 4037–4050, https://doi.org/10.5194/bg-21-4037-2024, https://doi.org/10.5194/bg-21-4037-2024, 2024
Short summary
Short summary
In this work, we measured the chemistry of seawater from samples obtained from different depths and locations off the east coast of the Northeast Greenland National Park to determine what is influencing concentrations of dissolved CO2. Historically, the region has always been thought to take up CO2 from the atmosphere, but we show that it is possible for the region to become a source in late summer. We discuss the variables that may be related to such changes.
Lennart Thomas Bach, Aaron James Ferderer, Julie LaRoche, and Kai Georg Schulz
Biogeosciences, 21, 3665–3676, https://doi.org/10.5194/bg-21-3665-2024, https://doi.org/10.5194/bg-21-3665-2024, 2024
Short summary
Short summary
Ocean alkalinity enhancement (OAE) is an emerging marine CO2 removal method, but its environmental effects are insufficiently understood. The OAE Pelagic Impact Intercomparison Project (OAEPIIP) provides funding for a standardized and globally replicated microcosm experiment to study the effects of OAE on plankton communities. Here, we provide a detailed manual for the OAEPIIP experiment. We expect OAEPIIP to help build scientific consensus on the effects of OAE on plankton.
Marlena Szeligowska, Déborah Benkort, Anna Przyborska, Mateusz Moskalik, Bernabé Moreno, Emilia Trudnowska, and Katarzyna Błachowiak-Samołyk
Biogeosciences, 21, 3617–3639, https://doi.org/10.5194/bg-21-3617-2024, https://doi.org/10.5194/bg-21-3617-2024, 2024
Short summary
Short summary
The European Arctic is experiencing rapid regional warming, causing glaciers that terminate in the sea to retreat onto land. Due to this process, the area of a well-studied fjord, Hornsund, has increased by around 100 km2 (40%) since 1976. Combining satellite and in situ data with a mathematical model, we estimated that, despite some negative consequences of glacial meltwater release, such emerging coastal waters could mitigate climate change by increasing carbon uptake and storage by sediments.
Mallory C. Ringham, Nathan Hirtle, Cody Shaw, Xi Lu, Julian Herndon, Brendan R. Carter, and Matthew D. Eisaman
Biogeosciences, 21, 3551–3570, https://doi.org/10.5194/bg-21-3551-2024, https://doi.org/10.5194/bg-21-3551-2024, 2024
Short summary
Short summary
Ocean alkalinity enhancement leverages the large surface area and carbon storage capacity of the oceans to store atmospheric CO2 as dissolved bicarbonate. We monitored CO2 uptake in seawater treated with NaOH to establish operational boundaries for carbon removal experiments. Results show that CO2 equilibration occurred on the order of weeks to months, was consistent with values expected from equilibration calculations, and was limited by mineral precipitation at high pH and CaCO3 saturation.
Riel Carlo O. Ingeniero, Gesa Schulz, and Hermann W. Bange
Biogeosciences, 21, 3425–3440, https://doi.org/10.5194/bg-21-3425-2024, https://doi.org/10.5194/bg-21-3425-2024, 2024
Short summary
Short summary
Our research is the first to measure dissolved NO concentrations in temperate estuarine waters, providing insights into its distribution under varying conditions and enhancing our understanding of its production processes. Dissolved NO was supersaturated in the Elbe Estuary, indicating that it is a source of atmospheric NO. The observed distribution of dissolved NO most likely resulted from nitrification.
Weiyi Tang, Jeff Talbott, Timothy Jones, and Bess B. Ward
Biogeosciences, 21, 3239–3250, https://doi.org/10.5194/bg-21-3239-2024, https://doi.org/10.5194/bg-21-3239-2024, 2024
Short summary
Short summary
Wastewater treatment plants (WWTPs) are known to be hotspots of greenhouse gas emissions. However, the impact of WWTPs on the emission of the greenhouse gas N2O in downstream aquatic environments is less constrained. We found spatially and temporally variable but overall higher N2O concentrations and fluxes in waters downstream of WWTPs, pointing to the need for efficient N2O removal in addition to the treatment of nitrogen in WWTPs.
Amanda Y. L. Cheong, Kogila Vani Annammala, Ee Ling Yong, Yongli Zhou, Robert S. Nichols, and Patrick Martin
Biogeosciences, 21, 2955–2971, https://doi.org/10.5194/bg-21-2955-2024, https://doi.org/10.5194/bg-21-2955-2024, 2024
Short summary
Short summary
We measured nutrients and dissolved organic matter for 1 year in a eutrophic tropical estuary to understand their sources and cycling. Our data show that the dissolved organic matter originates partly from land and partly from microbial processes in the water. Internal recycling is likely important for maintaining high nutrient concentrations, and we found that there is often excess nitrogen compared to silicon and phosphorus. Our data help to explain how eutrophication persists in this system.
Aaron Ferderer, Kai G. Schulz, Ulf Riebesell, Kirralee G. Baker, Zanna Chase, and Lennart T. Bach
Biogeosciences, 21, 2777–2794, https://doi.org/10.5194/bg-21-2777-2024, https://doi.org/10.5194/bg-21-2777-2024, 2024
Short summary
Short summary
Ocean alkalinity enhancement (OAE) is a promising method of atmospheric carbon removal; however, its ecological impacts remain largely unknown. We assessed the effects of simulated silicate- and calcium-based mineral OAE on diatom silicification. We found that increased silicate concentrations from silicate-based OAE increased diatom silicification. In contrast, the enhancement of alkalinity had no effect on community silicification and minimal effects on the silicification of different genera.
David González-Santana, María Segovia, Melchor González-Dávila, Librada Ramírez, Aridane G. González, Leonardo J. Pozzo-Pirotta, Veronica Arnone, Victor Vázquez, Ulf Riebesell, and J. Magdalena Santana-Casiano
Biogeosciences, 21, 2705–2715, https://doi.org/10.5194/bg-21-2705-2024, https://doi.org/10.5194/bg-21-2705-2024, 2024
Short summary
Short summary
In a recent experiment off the coast of Gran Canaria (Spain), scientists explored a method called ocean alkalinization enhancement (OAE), where carbonate minerals were added to seawater. This process changed the levels of certain ions in the water, affecting its pH and buffering capacity. The researchers were particularly interested in how this could impact the levels of essential trace metals in the water.
Lucas Porz, Wenyan Zhang, Nils Christiansen, Jan Kossack, Ute Daewel, and Corinna Schrum
Biogeosciences, 21, 2547–2570, https://doi.org/10.5194/bg-21-2547-2024, https://doi.org/10.5194/bg-21-2547-2024, 2024
Short summary
Short summary
Seafloor sediments store a large amount of carbon, helping to naturally regulate Earth's climate. If disturbed, some sediment particles can turn into CO2, but this effect is not well understood. Using computer simulations, we found that bottom-contacting fishing gears release about 1 million tons of CO2 per year in the North Sea, one of the most heavily fished regions globally. We show how protecting certain areas could reduce these emissions while also benefitting seafloor-living animals.
Jiaying A. Guo, Robert F. Strzepek, Kerrie M. Swadling, Ashley T. Townsend, and Lennart T. Bach
Biogeosciences, 21, 2335–2354, https://doi.org/10.5194/bg-21-2335-2024, https://doi.org/10.5194/bg-21-2335-2024, 2024
Short summary
Short summary
Ocean alkalinity enhancement aims to increase atmospheric CO2 sequestration by adding alkaline materials to the ocean. We assessed the environmental effects of olivine and steel slag powder on coastal plankton. Overall, slag is more efficient than olivine in releasing total alkalinity and, thus, in its ability to sequester CO2. Slag also had less environmental effect on the enclosed plankton communities when considering its higher CO2 removal potential based on this 3-week experiment.
Giovanni Galli, Sarah Wakelin, James Harle, Jason Holt, and Yuri Artioli
Biogeosciences, 21, 2143–2158, https://doi.org/10.5194/bg-21-2143-2024, https://doi.org/10.5194/bg-21-2143-2024, 2024
Short summary
Short summary
This work shows that, under a high-emission scenario, oxygen concentration in deep water of parts of the North Sea and Celtic Sea can become critically low (hypoxia) towards the end of this century. The extent and frequency of hypoxia depends on the intensity of climate change projected by different climate models. This is the result of a complex combination of factors like warming, increase in stratification, changes in the currents and changes in biological processes.
Sandy E. Tenorio and Laura Farías
Biogeosciences, 21, 2029–2050, https://doi.org/10.5194/bg-21-2029-2024, https://doi.org/10.5194/bg-21-2029-2024, 2024
Short summary
Short summary
Time series studies show that CH4 is highly dynamic on the coastal ocean surface and planktonic communities are linked to CH4 accumulation, as found in coastal upwelling off Chile. We have identified the crucial role of picoplankton (> 3 µm) in CH4 recycling, especially with the addition of methylated substrates (trimethylamine and methylphosphonic acid) during upwelling and non-upwelling periods. These insights improve understanding of surface ocean CH4 recycling, aiding CH4 emission estimates.
Charlotte A. J. Williams, Tom Hull, Jan Kaiser, Claire Mahaffey, Naomi Greenwood, Matthew Toberman, and Matthew R. Palmer
Biogeosciences, 21, 1961–1971, https://doi.org/10.5194/bg-21-1961-2024, https://doi.org/10.5194/bg-21-1961-2024, 2024
Short summary
Short summary
Oxygen (O2) is a key indicator of ocean health. The risk of O2 loss in the productive coastal/continental slope regions is increasing. Autonomous underwater vehicles equipped with O2 optodes provide lots of data but have problems resolving strong vertical O2 changes. Here we show how to overcome this and calculate how much O2 is supplied to the low-O2 bottom waters via mixing. Bursts in mixing supply nearly all of the O2 to bottom waters in autumn, stopping them reaching ecologically low levels.
Sabine Schmidt and Ibrahima Iris Diallo
Biogeosciences, 21, 1785–1800, https://doi.org/10.5194/bg-21-1785-2024, https://doi.org/10.5194/bg-21-1785-2024, 2024
Short summary
Short summary
Along the French coast facing the Bay of Biscay, the large Gironde and Loire estuaries suffer from hypoxia. This prompted a study of the small Charente estuary located between them. This work reveals a minimum oxygen zone in the Charente estuary, which extends for about 25 km. Temperature is the main factor controlling the hypoxia. This calls for the monitoring of small turbid macrotidal estuaries that are vulnerable to hypoxia, a risk expected to increase with global warming.
Simone R. Alin, Jan A. Newton, Richard A. Feely, Samantha Siedlecki, and Dana Greeley
Biogeosciences, 21, 1639–1673, https://doi.org/10.5194/bg-21-1639-2024, https://doi.org/10.5194/bg-21-1639-2024, 2024
Short summary
Short summary
We provide a new multi-stressor data product that allows us to characterize the seasonality of temperature, O2, and CO2 in the southern Salish Sea and delivers insights into the impacts of major marine heatwave and precipitation anomalies on regional ocean acidification and hypoxia. We also describe the present-day frequencies of temperature, O2, and ocean acidification conditions that cross thresholds of sensitive regional species that are economically or ecologically important.
Pamela Linford, Iván Pérez-Santos, Paulina Montero, Patricio A. Díaz, Claudia Aracena, Elías Pinilla, Facundo Barrera, Manuel Castillo, Aida Alvera-Azcárate, Mónica Alvarado, Gabriel Soto, Cécile Pujol, Camila Schwerter, Sara Arenas-Uribe, Pilar Navarro, Guido Mancilla-Gutiérrez, Robinson Altamirano, Javiera San Martín, and Camila Soto-Riquelme
Biogeosciences, 21, 1433–1459, https://doi.org/10.5194/bg-21-1433-2024, https://doi.org/10.5194/bg-21-1433-2024, 2024
Short summary
Short summary
The Patagonian fjords comprise a world region where low-oxygen water and hypoxia conditions are observed. An in situ dataset was used to quantify the mechanism involved in the presence of these conditions in northern Patagonian fjords. Water mass analysis confirmed the contribution of Equatorial Subsurface Water in the advection of the low-oxygen water, and hypoxic conditions occurred when the community respiration rate exceeded the gross primary production.
Ting Wang, Buyun Du, Inke Forbrich, Jun Zhou, Joshua Polen, Elsie M. Sunderland, Prentiss H. Balcom, Celia Chen, and Daniel Obrist
Biogeosciences, 21, 1461–1476, https://doi.org/10.5194/bg-21-1461-2024, https://doi.org/10.5194/bg-21-1461-2024, 2024
Short summary
Short summary
The strong seasonal increases of Hg in aboveground biomass during the growing season and the lack of changes observed after senescence in this salt marsh ecosystem suggest physiologically controlled Hg uptake pathways. The Hg sources found in marsh aboveground tissues originate from a mix of sources, unlike terrestrial ecosystems, where atmospheric GEM is the main source. Belowground plant tissues mostly take up Hg from soils. Overall, the salt marsh currently serves as a small net Hg sink.
Eleanor Simpson, Debby Ianson, Karen E. Kohfeld, Ana C. Franco, Paul A. Covert, Marty Davelaar, and Yves Perreault
Biogeosciences, 21, 1323–1353, https://doi.org/10.5194/bg-21-1323-2024, https://doi.org/10.5194/bg-21-1323-2024, 2024
Short summary
Short summary
Shellfish aquaculture operates in nearshore areas where data on ocean acidification parameters are limited. We show daily and seasonal variability in pH and saturation states of calcium carbonate at nearshore aquaculture sites in British Columbia, Canada, and determine the contributing drivers of this variability. We find that nearshore locations have greater variability than open waters and that the uptake of carbon by phytoplankton is the major driver of pH and saturation state variability.
S. Alejandra Castillo Cieza, Rachel H. R. Stanley, Pierre Marrec, Diana N. Fontaine, E. Taylor Crockford, Dennis J. McGillicuddy Jr., Arshia Mehta, Susanne Menden-Deuer, Emily E. Peacock, Tatiana A. Rynearson, Zoe O. Sandwith, Weifeng Zhang, and Heidi M. Sosik
Biogeosciences, 21, 1235–1257, https://doi.org/10.5194/bg-21-1235-2024, https://doi.org/10.5194/bg-21-1235-2024, 2024
Short summary
Short summary
The coastal ocean in the northeastern USA provides many services, including fisheries and habitats for threatened species. In summer 2019, a bloom occurred of a large unusual phytoplankton, the diatom Hemiaulus, with nitrogen-fixing symbionts. This led to vast changes in productivity and grazing rates in the ecosystem. This work shows that the emergence of one species can have profound effects on ecosystem function. Such changes may become more prevalent as the ocean warms due to climate change.
Claudine Hauri, Brita Irving, Sam Dupont, Rémi Pagés, Donna D. W. Hauser, and Seth L. Danielson
Biogeosciences, 21, 1135–1159, https://doi.org/10.5194/bg-21-1135-2024, https://doi.org/10.5194/bg-21-1135-2024, 2024
Short summary
Short summary
Arctic marine ecosystems are highly susceptible to impacts of climate change and ocean acidification. We present pH and pCO2 time series (2016–2020) from the Chukchi Ecosystem Observatory and analyze the drivers of the current conditions to get a better understanding of how climate change and ocean acidification could affect the ecological niches of organisms.
William Hiles, Lucy C. Miller, Craig Smeaton, and William E. N. Austin
Biogeosciences, 21, 929–948, https://doi.org/10.5194/bg-21-929-2024, https://doi.org/10.5194/bg-21-929-2024, 2024
Short summary
Short summary
Saltmarsh soils may help to limit the rate of climate change by storing carbon. To understand their impacts, they must be accurately mapped. We use drone data to estimate the size of three saltmarshes in NE Scotland. We find that drone imagery, combined with tidal data, can reliably inform our understanding of saltmarsh size. When compared with previous work using vegetation communities, we find that our most reliable new estimates of stored carbon are 15–20 % smaller than previously estimated.
De'Marcus Robinson, Anh L. D. Pham, David J. Yousavich, Felix Janssen, Frank Wenzhöfer, Eleanor C. Arrington, Kelsey M. Gosselin, Marco Sandoval-Belmar, Matthew Mar, David L. Valentine, Daniele Bianchi, and Tina Treude
Biogeosciences, 21, 773–788, https://doi.org/10.5194/bg-21-773-2024, https://doi.org/10.5194/bg-21-773-2024, 2024
Short summary
Short summary
The present study suggests that high release of ferrous iron from the seafloor of the oxygen-deficient Santa Barabara Basin (California) supports surface primary productivity, creating positive feedback on seafloor iron release by enhancing low-oxygen conditions in the basin.
David J. Yousavich, De'Marcus Robinson, Xuefeng Peng, Sebastian J. E. Krause, Frank Wenzhöfer, Felix Janssen, Na Liu, Jonathan Tarn, Franklin Kinnaman, David L. Valentine, and Tina Treude
Biogeosciences, 21, 789–809, https://doi.org/10.5194/bg-21-789-2024, https://doi.org/10.5194/bg-21-789-2024, 2024
Short summary
Short summary
Declining oxygen (O2) concentrations in coastal oceans can threaten people’s ways of life and food supplies. Here, we investigate how mats of bacteria that proliferate on the seafloor of the Santa Barbara Basin sustain and potentially worsen these O2 depletion events through their unique chemoautotrophic metabolism. Our study shows how changes in seafloor microbiology and geochemistry brought on by declining O2 concentrations can help these mats grow as well as how that growth affects the basin.
Cited articles
Abo, K. and Yamamoto, T.: Oligotrophication and its measures in the Seto Inland Sea, Japan, Bull. Jpn. Fish. Res. Ed. Ag., 49, 21–26, 2019.
Akashige, S. and Fushimi, T.: Growth, survival, and glycogen content of triploid Pacific oyster Crassostrea gigas in the waters of Hiroshima, Japan, Nippon Suisan Gakkaishi, 58, 1063–1071, 1992.
Ando, H., Maki, H., Kashiwagi, N., and Ishii, Y.: Long-term change in the status of water pollution in Tokyo Bay: recent trend of increasing bottom-water dissolved oxygen concentrations, J. Oceanogr., 77, 843–858, https://doi.org/10.1007/s10872-021-00612-7, 2021.
Anthony, K. R., Kline, D. I., Diaz-Pulido, G., Dove, S., and Hoegh-Guldberg, O.: Ocean acidification causes bleaching and productivity loss in P. Natl. Acad. Sci. USA, 105, 17442–17446, 2008.
Association for Environmental Conservation of the Seto Inland Sea: The Seto Inland Sea: The largest enclosed coastal sea in Japan, https://www.seto.or.jp/upload/publish/setonaikai_heisaseikaiiki.pdf, last access: 31 October 2022.
Auclair, F., Benshila, R., Bordois, L., Boutet, M., Brémond, M., Caillaud, M., Cambon, G., Capet, X., Debreu, L., Ducousso, N., Dufois, F., Dumas, F., Ethé, C., Gula, J., Hourdin, C., Illig, S., Jullien, S., Le Corre, M., Le Gac, S., Le Gentil, S., Lemarié, F., Marchesiello, P., Mazoyer, C., Morvan, G., Nguyen, C., Penven, P., Person, R., Pianezze, J., Pous, S., Renault, L., Roblou, L., Sepulveda, A., and Theetten, S.: Coastal and Regional Ocean COmmunity model (1.1), Zenodo [code], https://doi.org/10.5281/zenodo.7415133, 2019.
Aumont, O.: PISCES biogeochemical model, 36 pp., https://data-croco.ifremer.fr/papers/manuel_pisces.pdf (last access: 5 May 2023), 2005.
Aumont, O., Maier-Reimer, E., Blain, S., and Monfray, P.: An ecosystem model of the global ocean including Fe, Si, P Colimitations, Global Biogeochem. Cy., 17, 1–26, 2003.
Barton, A., Hales, B., Waldbusser, G., Langdon, C., and Feely, R. A.: The Pacific oyster, Crassostrea gigas, shows negative correlation to naturally elevated carbon dioxide levels: Implications for near-term ocean acidification effects, Limnol. Oceanogr., 57, 698–710, https://doi.org/10.4319/lo.2012.57.3.0698, 2012.
Bates, N. R., Astor, Y. M., Church, M. J., Currie, K., Dore, J. E., González-Dávila, M., Lorenzoni, L., Muller-Karger, F. Olafsson, J., and Santana-Casiano, J. M.: A time-series view of changing ocean chemistry due to ocean uptake of anthropogenic CO2 and ocean acidification, Oceanography, 27, 126–141, https://doi.org/10.5670/oceanog.2014.16, 2014.
Bernardo, L. P. C., Fujii, M., and Ono, T.: Development of a high-resolution marine ecosystem model for predicting the combined impacts of ocean acidification and deoxygenation, Front. Mar. Sci., 10, 1174892, https://doi.org/10.3389/fmars.2023.1174892, 2023.
Booth, J. A. T., McPhee-Shaw, E. E., Chua, P., Kingsley, E., Denny, M., Phillips, R., Bograd, S. J., Zeidberg, L. D., and Gilly, W. F.: Natural intrusions of hypoxic, low pH water into nearshore marine environments on the California coast, Cont. Shelf Res., 45, 108–115, https://doi.org/10.1016/j.csr.2012.06.009, 2012.
Breitburg, D., Levin, L. A., Oschlies, A., Grégoire, M., Chavez, F. P., Conley, D. J., Garçon, V., Gilbert, D., Gutiérrez, D., Isensee, K., Jacinto, G. S., Limburg, K. E., Montes, I., Naqvi, S. W. A., Pitcher, G. C., Rabalais, N. N., Roman, M. R., Rose, K. A., Seibel, B. A., Telszewski, M., Yasuhara, M., and Zhang, J.: Declining oxygen in the global ocean and coastal waters, Science, 359, 6371, https://doi.org/10.1126/science.aam7240, 2018.
Chanley, T. P. and Dinamani, P.: Comparative descriptions of some oyster larvae from New Zealand and Chile, and a description of a new genus of oyster, New Zeal. J. Mar. Fresh., 14, 103–120, 1980.
Da Silva, A., Young, A. C., and Levitus, S.: Atlas of Surface Marine Data 1994, Vol. 1, Algorithms and Procedures, NOAA Atlas NESDIS 6, U.S. Department of Commerce, Washington, DC, USA, 74 pp., 1994.
DeJong, H. B., Dunbar, R. B., Mucciarone, D., and Koweek, D. A.: Carbonate saturation state of surface waters in the Ross Sea and Southern Ocean: controls and implications for the onset of aragonite undersaturation, Biogeosciences, 12, 6881–6896, https://doi.org/10.5194/bg-12-6881-2015, 2015.
Dekshennieks, M. M., Hofmann, E. E., Klink, J. M., and Powell, E. N.: Modeling the vertical distribution of oyster larvae in response to environmental conditions, Mar. Ecol. Prog. Ser., 136, 97–110, 1996.
DePasquale, E., Baumann, H., and Gobler, C. J.: Vulnerability of early life stage Northwest Atlantic forage fish to ocean acidification and low oxygen, Mar. Ecol. Prog. Ser., 523, 145–156, https://doi.org/10.3354/meps11142, 2015.
Dickson, A. G.: Standard potential of the reaction: AgCl(s)
Doney, S. C., Busch, D. S., Cooley, S. R., and Kroeker, K. J.: The impacts of ocean acidification on marine ecosystems and reliant human, Annu. Rev. Environ. Resour., 45, 83–112, 2020.
Durland, E., Waldbusser, G., and Langdon, C.: Comparison of larval development in domesticated and naturalized stocks of Pacific oyster Crassostrea gigas exposed to high pCO2 conditions, Mar. Ecol. Prog. Ser., 621, 107–125, 2019.
Egbert, G. D. and Erofeeva S. Y.: Efficient inverse modeling of barotropic ocean tides, J. Atmos. Ocean. Technol., 19, 183–204, 2002.
Fisheries Agency: Guidelines for the introduction of technologies to improve the environment of bivalve fishing grounds, https://www.jfa.maff.go.jp/j/kenkyu/pdf/pdf/3-3.pdf (last access: 1 February 2022), 2013.
Fujii, M., Takao, S., Yamaka, T., Akamatsu, T., Fujita, Y., Wakita, M., Yamamoto, A., and Ono, T.: Continuous monitoring and future projection of ocean warming, acidification, and deoxygenation on the subarctic coast of Hokkaido, Japan, Front. Mar. Sci., 8, 590020, https://doi.org/10.3389/fmars.2021.590020, 2021.
Garcia, H. E., Locarnini, R. A., Boyer, T. P., Antonov, J. I., Baranova, O. K., M. M. Zweng, and Johnson, D. R.: World Ocean Atlas 2009, Volume 3: Dissolved Oxygen, Apparent Oxygen Utilization, and Oxygen Saturation. S, edited by: Levitus, S., NOAA Atlas NESDIS 70, U.S. Government Printing Office, Washington, DC, 344 pp., https://doi.org/10.7289/V5XG9P2W, 2010a.
Garcia, H. E., Locarnini, R. A., Boyer, T. P., Antonov, J. I., Zweng, M. M., Baranova, O. K., and Johnson, D. R.: World Ocean Atlas 2009, Vol. 4, Nutrients (phosphate, nitrate, silicate), edited by: Levitus, S., NOAA Atlas NESDIS 71, U.S. Government Printing Office, Washington, DC, 398 pp., 2010b.
Gazeau, F., Quiblier, C., Jansen, J. M., Gattuso, J.-P., Middelburg, J. J., and Heip, C. H.: Impact of elevated CO2 on shellfish calcification, Geophys. Res. Lett., 34, L07603, https://doi.org/10.1029/2006GL028554, 2007.
General Bathymetric Chart of the Oceans (GEBCO) website: Gridded Bathymetry Data, https://www.gebco.net/data_and_products/gridded_bathymetry_data/ (last access: 14 October 2022), 2021.
Gimenez, I., Waldbusser, G. G., and Hales, B.: Ocean acidification stress index for shellfish (OASIS): Linking Pacific oyster larval survival and exposure to variable carbonate chemistry regimes, Elementa, Sci. Anthro., 6, 51, https://doi.org/10.1525/elementa.306, 2018.
Gobler, C. J. and Baumann, H.: Hypoxia and acidification in ocean ecosystems: coupled dymanics and effects on marine life, Biol. Lett., 12, 20150976, https://doi.org/10.1098/rsbl.2015.0976, 2016.
Guinotte, J. M. and Fabry V. J.: Ocean acidification and its potential effects on marine ecosystems, Ann. NY Acad. Sci., 1134, 320–342, 2008.
Hamanoue, R.: Assessment of impacts of ocean acidification on Pacific oyster (Crassostrea gigas): A case study in the Hinase Area, Okayama Prefecture and Shizugawa Bay, Miyagi Prefecture, Master's Thesis, Graduate School of Environmental Science, Hokkaido University, 88 pp., 2022 (in Japanese).
Hauri, C., Gruber, N., Vogt, M., Doney, S. C., Feely, R. A., Lachkar, Z., Leinweber, A., McDonnell, A. M. P., Munnich, M., and Plattner, G.-K.: Spatiotemporal variability and long-term trends of ocean acidification in the California Current System, Biogeosciences, 10, 193–216, https://doi.org/10.5194/bg-10-193-2013, 2013.
Helm K. P., Bindoff , N. L., and Church, J. A.: Observed decreases in oxygen content of the global ocean, Geophys. Res. Lett., 38, L23602, https://doi.org/10.1029/2011GL049513, 2011.
Hochachka, P. W., Coupled glucose and amino acid catabolism in bivalve mollusks, in: Living without oxygen: closed and open systems in hypoxia tolerance, Harvard University Press, Cambridge, 25–41, 1980.
Horii, H., Tanaka, H., Watanabe, K., and Shuto, N.: In-situ observations of water mass exchange in Shizugawa Bay, Proc. Coast. Eng., 41, 1091–1095, 1994 (in Japanese).
Hoshiba, Y., Hasumi, H., Itoh, S., Matsumura, Y., and Nakada, S.: Biogeochemical impacts of flooding discharge with high suspended sediment on coastal seas: a modeling study for a microtidal open bay, Sci. Rep., 11, 21322, https://doi.org/10.1038/s41598-021-00633-8, 2021.
Imai, I., Yamaguchi, M., and Hori, Y.: Eutrophication and occurrences of harmful algal blooms in the Seto Inland Sea, Japan, Plank. Ben. Res., 1, 71–84, 2006.
IPCC (Intergovernmental Panel on Climate Change): Global Warming of 1.5 ∘C, An IPCC Special Report on the impacts of global warming of 1.5 ∘C above pre-industrial levels and related global greenhouse gas emission pathways, in the context of strengthening the global response to the threat of climate change, sustainable development, and efforts to eradicate poverty, edited by: Masson-Delmotte, V., Zhai, P., Pörtner, H. -O., Roberts, D., Skea, J., Shukla, P. R., Pirani, A., Moufouma-Okia, W., Péan, C., Pidcock, R., Connors, S., Matthews, J. B. R., Chen, Y., Zhou, X., Gomis, M. I., Lonnoy, E., Maycock, T., Tignor, M., and Waterfield, T., Cambridge University Press, Cambridge, UK and New York, NY, USA, 630 pp., https://www.ipcc.ch/site/assets/uploads/sites/2/2019/06/SR15_Full_Report_High_Res.pdf (last access: 14 October 2022), 2018.
IPCC: IPCC Special Report on the Ocean and Cryosphere in a Changing Climate, edited by: Pörtner, H. -O., Roberts, D. C., Masson-Delmotte, V., Zhai, P., Tignor, M., Poloczanska, E., Mintenbeck, K., Alegria, A., Nicolai M., Okem, A., Petzold, J., Rama, B., and Weyer, N. M., Cambridge University Press, Cambridge, United Kingdom and New York, NY, USA, 765 pp., https://www.ipcc.ch/site/assets/uploads/sites/3/2019/12/SROCC_FullReport_FINAL.pdf (last access: 14 October 2022), 2019.
IPCC: Summary for Policymakers, in: Climate Change 2021: The Physical Science Basis, Contribution of Working Group I to the Sixth Assessment Report of the Intergovernmental Panel on Climate Change, edited by: Masson-Delmotte, V., Zhai, P., Pirani, A., Connors, S. L., Péan, C., Berger, S., Caud, N., Chen, Y., Goldfarb, L., Gomis, M. I., Huang, M., Leitzell, K., Lonnoy, E., Matthews, J. B. R., Maycock, T. K., Waterfield, T., Yelekçi, O., Yu, R., and Zhou, B., Cambridge University Press, Cambridge, United Kingdom and New York, NY, USA, 3–32, https://doi.org/10.1017/9781009157896.001, 2021.
Ito, T., Minobe, S., Long, M. C., and Deutch, C.: Upper ocean O2 trends: 1958–2015, Geophys. Res. Lett., 44, 4214–4223, https://doi.org/10.1002/2017GL073613, 2017.
Japan Meteorological Agency website: NetCDF data (MSM, RSM) reconstructed around analysis values, http://database.rish.kyoto-u.ac.jp/arch/jmadata/gpv-netcdf.html, last access: 14 October 2022.
Jiang, L.-Q., Carter, B. R., Feely, R. A., Lauvset, S. K., and Olsen, A.: Surface ocean pH and buffer capacity: past, present and future, Sci. Rep., 9, 18624, https://doi.org/10.1038/s41598-019-55039-4, 2019.
Jullien, S., Caillaud, M., Benshila, R., Bordois, L., Cambon, G., Dumas, F., Le Gentil, S., Lemarié, F., Marchesiello, P., and Theetten, S.: Coastal and Regional Ocean COmmunity (CROCO) modeling system technical and numerical documentation (Release 1.1), https://doi.org/10.5281/zenodo.7400759, 2019.
Kessouri, F., McWilliams, J. C., Bianchi, D., Sutula, M., Renault, L., Deutsch, C., Feely, R. A., McLaughlin, K., Ho, M., Howard, E. M., Bednaršek, N., Damien, P., Molemaker, J., and Weisberg, S. B.: Coastal eutrophication drives acidification, oxygen loss, and ecosystem change in a major oceanic upwelling system, P. Natl. Acad. Sci. USA, 118, e2018856118, https://doi.org/10.1073/pnas.2018856118, 2021.
Kimura, R., Takami, H., Ono, T., Onitsuka, T., and Nojiri, Y.: Effects of elevated pCO2 on the early development of the commercially important gastropod, Ezo abalone Haliotis discus hannai, Fish. Oceanogr., 20, 357–366, https://doi.org/10.1111/j.1365-2419.2011.00589.x, 2011.
Koslow, J. A., Goericke R., Lara-Lopez, A., and Watson, W.: Impact of declining intermediate-water oxygen on deep water fishes in the California Current, Mar. Ecol. Prog. Ser., 436, 207–218, https://doi.org/10.3354/meps09270, 2011.
Koslow, J. A., Miller, E. F., and McGowan, J. A.: Dramatic declines in coastal and oceanic fish communities off California, Mar. Ecol. Prog. Ser., 538, 221–227, https://doi.org/10.3354/meps11444, 2015.
Komatsu, T., Sasa, S., Montani, S., Yoshimura, C., Fujii, M., Natsuike, M., Nishimura, O., Sakamaki T., and Yanagi, T.: Studies on a coastal environment management method for an open-type bay: the case of Shizugawa Bay in Southern Sanriku Coast, Bull. Coast. Oceanogr., 56, 21–29, 2018 (in Japanese with English abstract).
Kurihara, H.: Effects of CO2-driven ocean acidification on the early developmental stages of invertebrates, Mar. Ecol. Prog. Ser., 373, 275–284, 2008.
Kurihara, H., Kato, S., and Ishimatsu, A.: Effects of increased seawater pCO2 on early development of the oyster Crassostrea gigas, Aquat. Biol., 1, 91–98, 2007.
Laffoley, D. and Baxter, J. M. (Eds.): Ocean deoxygenation: Everyone's problem – Causes, impacts, consequences and solutions, Full report, Gland, Switzerland, IUCN, 580 pp., https://doi.org/10.2305/IUCN.CH.2019.13.en, 2019.
Lee, K., Kim, T.-W., Byrne, R. H., Millero, F. J., Feely, R. A., and Liu, Y.-M.: The universal ratio of boron to chlorinity for the North Pacific and North Atlantic oceans, Geochim. Cosmochim. Ac., 74, 1801–1811, 2010.
Levitus, S., Antonov, J. I., Boyer, T. P., Locarnini, R. A., Garcia, H. E., and Mishonov, A. V.: Global Ocean Heat Content 1955–2008 in light of recently revealed instrumentation problems, Geophy. Res. Lett., 36, L07608, https://doi.org/10.1029/2008GL037155, 2009.
Lewis, E., and Wallace, D., and Allison, L. J.: Program developed for CO2 system calculations, ORNL/CDIAC-105, Oak Ridge Natl. Lab, 33 pp., https://doi.org/10.2172/639712, 1998.
Limburg, K. E., Breitburg, D., Swaney, D. P., and Jacinto, G.: Ocean deoxygenation: A primer, One Earth, 2, 24–29, https://doi.org/10.1016/j.oneear.2020.01.001, 2020.
Lueker, T. J., Dickson, A. G., and Keeling, C. D.: Ocean pCO2 calculated from dissolved inorganic carbon, alkalinity, and equations for K1 and K2: validation based on laboratory measurements of CO2 in gas and seawater at equilibrium, Mar. Chem., 70, 105–119, https://doi.org/10.1016/s0304-4203(00)00022-0, 2000.
Melzner, F., Thomsen, J., Koeve, W., Oschilies, A., Gutowska, M. A., Bange, H. W., Hansen, H., P., and Körtzinger, A.: Future ocean acidification will be amplified by hypoxia in coastal habitats, Mar. Biol., 160, 1875–1888, https://doi.org/10.1007/s00227-012-1954-1, 2013.
Ministry of Agriculture, Forestry and Fisheries website: https://www.maff.go.jp/j/tokei/kouhyou/kaimen_gyosei/, last access: 14 October 2022.
Ministry of the Environment: Guide book of environments in enclosed sea areas (88 areas), Ministry of Environment of Japan, Tokyo, 407, 2010 (in Japanese).
Ministry of the Environment website: https://water-pub.env.go.jp/water-pub/mizu-site/mizu/kousui/dataMap.asp, last access: 14 October 2022.
Morse, J. W., Mucci, A., and Millero, F. J.: The solubility of calcite and aragonite in seawater of 35 %, Geochim. Cosmochim. Ac., 44, 85–94, 1980.
Ning, X., Lin, C., Su, J., Liu, C., Hao, Q., and Le, F.: Long-term changes of dissolved oxygen, hypoxia, and the responses of the ecosystems in the East China Sea from 1975 to 1995, J. Oceanogr., 67, 59–75, https://doi.org/10.1007/s10872-011-0006-7, 2011.
Nishikawa, S., Wakamatsu, T., Ishizaki, H., Sakamoto, K., Tanaka, Y., Tsujino, H., Yamanaka, G., Kamachi, M., and Ishikawa, Y.: Development of high-resolution future ocean regional projection datasets for coastal applications in Japan, Prog. Earth Planet. Sci., 8, https://doi.org/10.1186/s40645-020-00399-z, 2021.
Nomura, M., Chiba, N., Xu, K.-Q., and Sudo, R.: The formation of anoxic water mass in Shizugawa Bay, Oceanogr. Soc. Jpn., 2, 203–210, 1996 (in Japanese with English abstract).
Oizumi S., Ito, S., Koganezawa, A., Sakai, S., Sato, R., and Kanno, H.: Techniques of oyster culture, in: Aquaculture in shallow seas: progress in shallow sea culture, edited by: Imai, T., Koseisha Koseikaku, Tokyo, 153–189, 1971 (in Japanese).
Onitsuka, T., Kimura, R., Ono, T., Takami, H., and Y. Nojiri, Y.: Effects of ocean acidification on the early developmental stages of the horned turban, Turbo cornutus, Mar. Biol., 161, 1127–1138, 2014.
Onitsuka, T., Takami, H., Muraoka, D., Matsumoto, Y., Nakatsubo, A., Kimura, R., Ono, T., and Nojiri, Y.: Effects of ocean acidification with pCO2 diurnal fluctuations on survival and larval shell formation of ezo abalone, Haliotis discus hannai, Mar. Environ. Res., 134, 28–36, 2018.
Ono, T.: Long-term trends of oxygen concentration in the waters in bank and shelves of the Southern Japan Sea, J. Oceanogr., 77, 659–684, https://doi.org/10.1007/s10872-021-00599-1, 2021.
Orr, J. C., Fabry, V. J., Aumont, O., Bopp, L., Doney, S. C., Feely, R. A., Gnanadesikan, A., Gruber, N., Ishida, A., Joos, F., Key, R. M., Lindsay, K., Slater, R. D., Totterdell, I. J., Weirig, M.-F., Yamanaka, Y., and Yool, A.: Anthropogenic ocean acidification over the twenty-first century and Nature, 437, 681–686, https://doi.org/10.1038/nature04095, 2005.
Oschlies, A., Brandt, P., Stramma, L., and Schmidtko, S.: Drivers and mechanisms of ocean deoxygenation, Nat. Geosci., 11, 467–473, https://doi.org/10.1038/s41561-018-0152-2, 2018.
Papalexiou, S. M. and Montanari, A.: Global and regional increase of precipitation extremes under global warming, Water Resour. Res., 55, 4901–4914, 2019.
Penven, P., Cambon, G., Marchesiello, P., Sepulveda, A., Benshila, R., Illig, S., Jullien, S., Le Corre, M., Le Gentil, S., and Morvan, G.: CROCO tools (1.1), Zenodo [code], https://doi.org/10.5281/zenodo.7432019, 2019.
Perez, F. F. and Fraga, F.: Association constant of fluoride and hydrogen ions in seawater, Mar. Chem., 21, 161–168, 1987.
Pierrot, D., Lewis, E., and Wallace, D. W. R.: MS Excel program developed for CO2 system calculations. ORNL/CDIAC-105a. Oak Ridge, TN, Carbon Dioxide Information Analysis Center, Oak Ridge National Laboratory, 2006.
Rabalais, N. N., Díaz, R. J., Levin, L. A., Turner, R. E., Gilbert, D., and Zhang, J.: Dynamics and distribution of natural and human-caused hypoxia, Biogeosciences, 7, 585–619, https://doi.org/10.5194/bg-7-585-2010, 2010.
Sasano, D., Takatani, Y., Kosugi, N., Nakano, T., Midorikawa, T., and Ishii, M.: Multidecadal trends of oxygen and their controlling factors in the western North Pacific, Global Biogeochem. Cy., 29, 935–956, https://doi.org/10.1002/2014GB005065, 2015.
Sasano, D., Takatani, Y., Kosugi, N., Nakano, T., Midorikawa, T., and Ishii, M.: Decline and bidecadal oscillations of dissolved oxygen in the Oyashio region and their propagation to the western North Pacific, Gloal Biogeochem. Cy., 32, 909–931, https://doi.org/10.1029/2017GB005876, 2018.
Schmidtko, S., Stramma, L., and Visbeck, M.: Decline in global oceanic oxygen content during the past five decades, Nature, 542, 335–339, https://doi.org/10.1038/nature21399, 2017.
Steckbauer, A., Klein, S. G., and Duarte, C. M.: Additive impacts of deoxygenation and acidification threaten marine biota, Glob. Change Biol., 26, 56012–5612, https://doi.org/10.1111/gcb.15252, 2020.
Stramma, L., Schmidtko, S., Levin, L. A., and Johnson, G. C.: Ocean oxygen minima expansions and their biological impacts, Deep-Sea Res. Pt. I, 57, 587–595, https://doi.org/10.1016/j.dsr.2010.01.005, 2010.
Stramma, L., Prince, E. D., Schmidtko, S., Luo, J., Hooliham, J. P., Visbeck, M., Wallace, D. W. R., Brandt, P., and Kortzinger, A.: Expansion of oxygen minimum zones may reduce available habitat for tropical pelagic fishes, Nat. Clim. Change, 2, 33–37, https://doi.org/10.1038/NCLIMATE1304, 2011.
Stramma, L., Oschlies, A., and Schmidtko, S.: Mismatch between observed and modeled trends in dissolved upper-ocean oxygen over the last 50 yr, Biogeosciences, 9, 4045–4057, https://doi.org/10.5194/bg-9-4045-2012, 2012.
Stramma, L., Schmidtko, S., Bograd, S. J., Ono, T., Ross, T., Sasano, D., and Whitney, F. A.: Trends and decadal oscillations of oxygen and nutrients at 50 to 300 m depth in the equatorial and North Pacific, Biogeosciences, 17, 813–831, https://doi.org/10.5194/bg-17-813-2020, 2020.
Suzuki, M., Nakatani, Y., and Koga, Y.: Evaluating the effects of operations to increase nitrogen discharge from sewage treatment plants on concentrations of organic matter and nutrients in surface water at Harima-nada in the Seto Inland Sea, J. Jpn. Soc. Water Environ., 43, 43–53, 2020 (in Japanese with English abstract).
Tachi, H., Hata, N., Saitou, Y., and Iwao, T.: An attempt to collect the natural spat of Japanese oyster Crassostrea gigas in the coast of Toba-Shima, Mie prefecture, Bull. Mie Pref. Fish. Res. Inst., 22, 17–24, 2013 (in Japanese).
Taylor, K. E., Stouffer, R. J., and Meehl, G. A.: An overview of CMIP5 and the experiment design, Bull. Am. Meteorol. Soc., 93, 485–498, https://doi.org/10.1175/BAMS-D-11-00094.1, 2012.
Tsujino, H., Nakano, H., Sakamoto, K., Urakawa, S., Hirabara, M., Ishizaki, H., and Yamanaka, G.: Reference manual for the Meteorological Research Institute Community Ocean Model version 4 (MRI.COMv4), Tech. Rep. MRI, 80, 284 pp., https://doi.org/10.11483/mritechrepo.80, 2017.
van Vuuren, D. P., Edmonds, J., Kainuma, M., Riahi, K., Thomson, A., Hibbard, K., Hurtt, G. C., Kram, T., Krey, V., Lamarque, J.-F., Masui, T, Meinshausen, M., Nakicenovic, N., Smith, S. J., and Rose, S. K.: The representative concentration pathways: an overview, Climatic Change, 109, 5–31, 2011.
Wada, S., Ishii, M., Kosugi, N., Sasano, D., Matsushita, W., Omori, Y., and Hama, T.: Seasonal dynamics of seawater CO2 system at a coastal site near the southern tip of Izu Peninsula, Japan, J. Oceanogr., 76, 227–242, 2020.
Wakita, M., Nagano, A., Fujiki, T., and Watanabe, S.: Slow acidification of the winter mixed layer in the subarctic western North Pacific, J. Geophys. Res.-Ocean., 122, 6923–6935, 2017.
Wakita, M., Sasaki, K., Nagano, A., Abe, H., Tanaka, T., Nagano, K., Sugie, K., Kaneko, H., Kimoto, K., Okunishi, T., Takada, M., Yoshino, J., and Watanabe, S.: Rapid reduction of pH and CaCO3 saturation state in the Tsugaru Strait by the intensified Tsugaru warm current during 2012–2019, Geophys. Res. Lett., 48, GL091332, https://doi.org/10.1029/2020GL091332, 2021.
Waldbusser, G. G., Hales, B., Langdon, C. J., Haley, B. A., Schrader, P., Brunner, E. L., Gray, M. W., Miller, C. A., and Gimenez, I.: Saturation-state sensitivity of marine bivalve larvae to ocean acidification, Nat. Clim. Change, 5, 273–280, 2015.
Wallace, R. B., Baumann, H., Grear, J. S., Aller, R. C., and Gobler, C. J.: Coastal ocean acidification: The other eutrophication problem, Estuar. Coast. Shelf Sci., 148, 1–13, 2014.
Watanabe, S., Hajima, T., Sudo, K., Nagashima, T., Takemura, T., Okajima, H., Nozawa, T., Kawase, H., Abe, M., Yokohata, T., Ise, T., Sato, H., Kato, E., Takata, K., Emori, S., and Kawamiya, M.: MIROC-ESM 2010: model description and basic results of CMIP5-20C3M experiments, Geosci. Model Dev., 4, 845–872, https://doi.org/10.5194/gmd-4-845-2011, 2011.
Watanabe, Y. W., Li, B. F., Yamasaki, R., Yunoki, S., Imai, K., Hosoda, S., and Nakano, Y.: Spatiotemporal changes of ocean carbon species in the western North Pacific using parameterization technique, J. Oceanogr., 76, 155–167, 2020.
Wei, Q., Yao, Q., Wang, B., Xue, L., Fu, M., Sun, J., Liu, X., and Yu, Z.: Deoxygenation and its controls in a semienclosed shelf ecosystem, northern Yellow Sea, J. Geophys. Res., 124, 9004–9019, https://doi.org/10.1029/2019JC015399, 2019.
Xiong, T., Wei, Q., Zhai, W., Li, C., Wang, S., Zhang, Y., Liu, S., and Yu, S.: Comparing subsurface seasonal deoxygenation and acidification in the Yellow Sea and northern East China Sea along the north-to-south latitude gradient, Front. Mar. Sci., 7, 686, https://doi.org/10.3389/fmars.2020.00686, 2020.
Yamaka, T.: Assessment and future projection of variational characteristics of global warming and ocean acidification proxies in Oshoro Bay, Hokkaido, Master's thesis, Graduate School of Environmental Science, Hokkaido University, 74 pp., 2019 (in Japanese).
Yamamoto, T., Orimoto, K., Asaoka, S., Yamamoto, H., and Onodera, S.: A Conflict between the legacy of eutrophication and cultural oligotrophication in Hiroshima Bay, Oceans, 2, 546–565, https://doi.org/10.3390/oceans2030031, 2021.
Yamamoto-Kawai, M., Kawamura, N., Ono, T., Kosugi, N., Kubo, A., Ishii, M., and Kanda, J.: Calcium carbonate saturation and ocean acidification J. Oceanogr., 71, 427–439, 2015.
Yara, Y., Oshima, K., Fujii, M., Yamano, H., Yamanaka, Y., and Okada, N.: Projection and uncertainty of the poleward range expansion of coral habitats in response to sea surface temperature warming: A multiple climate model study, Galaxea, J. Coral Reef Stud., 13, 11–20, 2011.
Yorifuji, M., Hahashi, M., and Ono, T.: Interactive effects of ocean deoxygenation and acidification on a coastal fish Sillago japonica in early life stages, Mar. Pollut. Bull., in review, 2023.
Yoshino, J., Arakawa, S., Toyoda, M., and Kobayashi, T.: Inter-scenario comparison of warming effects on typhoon intensity using a high-resolution typhoon model, Doboku Gakkai Ronbunshuu, Coast. Eng., 71, 1519–1524, 2015 (in Japanese).
Zhang, J., Gilbert, D., Gooday, A. J., Levin, L., Naqvi, S. W. A., Middelburg, J. J., Scranton, M., Ekau, W., Peña, A., Dewitte, B., Oguz, T., Monteiro, P. M. S., Urban, E., Rabalais, N. N., Ittekkot, V., Kemp, W. M., Ulloa, O., Elmgren, R., Escobar-Briones, E., and Van der Plas, A. K.: Natural and human-induced hypoxia and consequences for coastal areas: synthesis and future development, Biogeosciences, 7, 1443–1467, https://doi.org/10.5194/bg-7-1443-2010, 2010.
Short summary
This is the first study of the current and future impacts of climate change on Pacific oyster farming in Japan. Future coastal warming and acidification may affect oyster larvae as a result of longer exposure to lower-pH waters. A prolonged spawning period may harm oyster processing by shortening the shipping period and reducing oyster quality. To minimize impacts on Pacific oyster farming, in addition to mitigation measures, local adaptation measures may be required.
This is the first study of the current and future impacts of climate change on Pacific oyster...
Altmetrics
Final-revised paper
Preprint