Articles | Volume 13, issue 23
https://doi.org/10.5194/bg-13-6419-2016
© Author(s) 2016. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
https://doi.org/10.5194/bg-13-6419-2016
© Author(s) 2016. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
Research article
| 
30 Nov 2016
Research article |
| 30 Nov 2016
What drives the spatial variability of primary productivity and matter fluxes in the north-west African upwelling system? A modelling approach
Pierre-Amaël Auger
CORRESPONDING AUTHOR
Univ. Brest, CNRS, IRD, Ifremer, Laboratoire d'Océanographie
Physique et Spatiale (LOPS), IUEM, 29280, Plouzané, France
Institut de Recherche pour le Développement (IRD), Laboratoire de
l'Environnement MARin (LEMAR), UMR 195 CNRS/IRD/UBO/Ifremer, Campus
UCAD-IRD, BP 1386, Dakar, Senegal
Instituto Milenio de Oceanografia and Escuela de Ciencias del Mar,
Pontificia Universidad Catolica de Valparaiso, Valparaiso, Chile
Thomas Gorgues
Univ. Brest, CNRS, IRD, Ifremer, Laboratoire d'Océanographie
Physique et Spatiale (LOPS), IUEM, 29280, Plouzané, France
Eric Machu
Univ. Brest, CNRS, IRD, Ifremer, Laboratoire d'Océanographie
Physique et Spatiale (LOPS), IUEM, 29280, Plouzané, France
ESP/CAD, Laboratoire de Physique de l'Atmosphère et de l'Océan
Siméon Fongang (LPAO-SF), BP 5085, Dakar-Fann, Senegal
Olivier Aumont
Univ. Brest, CNRS, IRD, Ifremer, Laboratoire d'Océanographie
Physique et Spatiale (LOPS), IUEM, 29280, Plouzané, France
now at: Laboratoire d'Océanographie et de Climatologie: Expérimentation et
Analyse Numérique (LOCEAN), Institut Pierre-Simon Laplace (IPSL),
UPMC/CNRS/IRD/MNHN, 4 Place Jussieu, Case 100, 75252 Paris Cedex 05, France
Patrice Brehmer
Institut de Recherche pour le Développement (IRD), Laboratoire de
l'Environnement MARin (LEMAR), UMR 195 CNRS/IRD/UBO/Ifremer, Campus
UCAD-IRD, BP 1386, Dakar, Senegal
Institut Sénégalais de Recherche Agricole (ISRA)/Centre de
Recherche Océanographique de Dakar-Thiaroye (CRODT), Pole de recherche
de Hann (PRH), BP 2241, Dakar, Senegal
Related authors
No articles found.
Lisa Di Matteo, Fabio Benedetti, Sakina-Dorothée Ayata, and Olivier Aumont
EGUsphere, https://doi.org/10.5194/egusphere-2025-1465, https://doi.org/10.5194/egusphere-2025-1465, 2025
This preprint is open for discussion and under review for Biogeosciences (BG).
Short summary
Short summary
Mesozooplankton gather small current-drifting animals. They are very diverse and play key roles in the functioning of marine ecosystem and ocean carbon cycle, especially through the production of rapidly sinking particles. Usually under-represented in marine biogeochemical models, we add 3 feeding strategies in the PISCES model and investigate their impact on carbon cycle at global scale. We find distinct distributions between mesozooplankton types with different contributions to carbon export.
Hans Segura, Xabier Pedruzo-Bagazgoitia, Philipp Weiss, Sebastian K. Müller, Thomas Rackow, Junhong Lee, Edgar Dolores-Tesillos, Imme Benedict, Matthias Aengenheyster, Razvan Aguridan, Gabriele Arduini, Alexander J. Baker, Jiawei Bao, Swantje Bastin, Eulàlia Baulenas, Tobias Becker, Sebastian Beyer, Hendryk Bockelmann, Nils Brüggemann, Lukas Brunner, Suvarchal K. Cheedela, Sushant Das, Jasper Denissen, Ian Dragaud, Piotr Dziekan, Madeleine Ekblom, Jan Frederik Engels, Monika Esch, Richard Forbes, Claudia Frauen, Lilli Freischem, Diego García-Maroto, Philipp Geier, Paul Gierz, Álvaro González-Cervera, Katherine Grayson, Matthew Griffith, Oliver Gutjahr, Helmuth Haak, Ioan Hadade, Kerstin Haslehner, Shabeh ul Hasson, Jan Hegewald, Lukas Kluft, Aleksei Koldunov, Nikolay Koldunov, Tobias Kölling, Shunya Koseki, Sergey Kosukhin, Josh Kousal, Peter Kuma, Arjun U. Kumar, Rumeng Li, Nicolas Maury, Maximilian Meindl, Sebastian Milinski, Kristian Mogensen, Bimochan Niraula, Jakub Nowak, Divya Sri Praturi, Ulrike Proske, Dian Putrasahan, René Redler, David Santuy, Domokos Sármány, Reiner Schnur, Patrick Scholz, Dmitry Sidorenko, Dorian Spät, Birgit Sützl, Daisuke Takasuka, Adrian Tompkins, Alejandro Uribe, Mirco Valentini, Menno Veerman, Aiko Voigt, Sarah Warnau, Fabian Wachsmann, Marta Wacławczyk, Nils Wedi, Karl-Hermann Wieners, Jonathan Wille, Marius Winkler, Yuting Wu, Florian Ziemen, Janos Zimmermann, Frida A.-M. Bender, Dragana Bojovic, Sandrine Bony, Simona Bordoni, Patrice Brehmer, Marcus Dengler, Emanuel Dutra, Saliou Faye, Erich Fischer, Chiel van Heerwaarden, Cathy Hohenegger, Heikki Järvinen, Markus Jochum, Thomas Jung, Johann H. Jungclaus, Noel S. Keenlyside, Daniel Klocke, Heike Konow, Martina Klose, Szymon Malinowski, Olivia Martius, Thorsten Mauritsen, Juan Pedro Mellado, Theresa Mieslinger, Elsa Mohino, Hanna Pawłowska, Karsten Peters-von Gehlen, Abdoulaye Sarré, Pajam Sobhani, Philip Stier, Lauri Tuppi, Pier Luigi Vidale, Irina Sandu, and Bjorn Stevens
EGUsphere, https://doi.org/10.5194/egusphere-2025-509, https://doi.org/10.5194/egusphere-2025-509, 2025
This preprint is open for discussion and under review for Geoscientific Model Development (GMD).
Short summary
Short summary
The nextGEMS project developed two Earth system models that resolve processes of the order of 10 km, giving more fidelity to the representation of local phenomena, globally. In its fourth cycle, nextGEMS performed simulations with coupled ocean, land, and atmosphere over the 2020–2049 period under the SSP3-7.0 scenario. Here, we provide an overview of nextGEMS, insights into the model development, and the realism of multi-decadal, kilometer-scale simulations.
Sarah Albernhe, Thomas Gorgues, Olivier Titaud, Patrick Lehodey, Christophe Menkes, and Anna Conchon
State Planet Discuss., https://doi.org/10.5194/sp-2024-35, https://doi.org/10.5194/sp-2024-35, 2024
Revised manuscript accepted for SP
Short summary
Short summary
Micronekton are marine organisms gathering a wide diversity of taxa (crustaceans, fish, cephalopods, etc.), 2 to 20 cm in size. They are responsible for an important carbon export to the deep ocean and are the main prey for marine predators. We define provinces of homogeneous environmental parameters, representing areas of common micronekton biomass and vertical structure. We observe the evolution of the provinces in time from 1998 to 2023, to account for the seasonal to interannual variability.
Madhavan Girijakumari Keerthi, Olivier Aumont, Lester Kwiatkowski, and Marina Levy
EGUsphere, https://doi.org/10.5194/egusphere-2024-2294, https://doi.org/10.5194/egusphere-2024-2294, 2024
Short summary
Short summary
Our study assesses the capability of CMIP6 models to reproduce satellite observations of sub-seasonal chlorophyll variability. Models struggle to reproduce the sub-seasonal variance and its contribution across timescales. Some models overestimate sub-seasonal variance and exaggerate its role in annual fluctuations, while others underestimate it. Underestimation is likely due to the coarse resolution of models, while overestimation may result from intrinsic oscillations in biogeochemical models.
Alban Planchat, Lester Kwiatkowski, Laurent Bopp, Olivier Torres, James R. Christian, Momme Butenschön, Tomas Lovato, Roland Séférian, Matthew A. Chamberlain, Olivier Aumont, Michio Watanabe, Akitomo Yamamoto, Andrew Yool, Tatiana Ilyina, Hiroyuki Tsujino, Kristen M. Krumhardt, Jörg Schwinger, Jerry Tjiputra, John P. Dunne, and Charles Stock
Biogeosciences, 20, 1195–1257, https://doi.org/10.5194/bg-20-1195-2023, https://doi.org/10.5194/bg-20-1195-2023, 2023
Short summary
Short summary
Ocean alkalinity is critical to the uptake of atmospheric carbon and acidification in surface waters. We review the representation of alkalinity and the associated calcium carbonate cycle in Earth system models. While many parameterizations remain present in the latest generation of models, there is a general improvement in the simulated alkalinity distribution. This improvement is related to an increase in the export of biotic calcium carbonate, which closer resembles observations.
Corentin Clerc, Laurent Bopp, Fabio Benedetti, Meike Vogt, and Olivier Aumont
Biogeosciences, 20, 869–895, https://doi.org/10.5194/bg-20-869-2023, https://doi.org/10.5194/bg-20-869-2023, 2023
Short summary
Short summary
Gelatinous zooplankton play a key role in the ocean carbon cycle. In particular, pelagic tunicates, which feed on a wide size range of prey, produce rapidly sinking detritus. Thus, they efficiently transfer carbon from the surface to the depths. Consequently, we added these organisms to a marine biogeochemical model (PISCES-v2) and evaluated their impact on the global carbon cycle. We found that they contribute significantly to carbon export and that this contribution increases with depth.
Laurent Bopp, Olivier Aumont, Lester Kwiatkowski, Corentin Clerc, Léonard Dupont, Christian Ethé, Thomas Gorgues, Roland Séférian, and Alessandro Tagliabue
Biogeosciences, 19, 4267–4285, https://doi.org/10.5194/bg-19-4267-2022, https://doi.org/10.5194/bg-19-4267-2022, 2022
Short summary
Short summary
The impact of anthropogenic climate change on the biological production of phytoplankton in the ocean is a cause for concern because its evolution could affect the response of marine ecosystems to climate change. Here, we identify biological N fixation and its response to future climate change as a key process in shaping the future evolution of marine phytoplankton production. Our results show that further study of how this nitrogen fixation responds to environmental change is essential.
Martí Galí, Marcus Falls, Hervé Claustre, Olivier Aumont, and Raffaele Bernardello
Biogeosciences, 19, 1245–1275, https://doi.org/10.5194/bg-19-1245-2022, https://doi.org/10.5194/bg-19-1245-2022, 2022
Short summary
Short summary
Part of the organic matter produced by plankton in the upper ocean is exported to the deep ocean. This process, known as the biological carbon pump, is key for the regulation of atmospheric carbon dioxide and global climate. However, the dynamics of organic particles below the upper ocean layer are not well understood. Here we compared the measurements acquired by autonomous robots in the top 1000 m of the ocean to a numerical model, which can help improve future climate projections.
Julien Jouanno, Rachid Benshila, Léo Berline, Antonin Soulié, Marie-Hélène Radenac, Guillaume Morvan, Frédéric Diaz, Julio Sheinbaum, Cristele Chevalier, Thierry Thibaut, Thomas Changeux, Frédéric Menard, Sarah Berthet, Olivier Aumont, Christian Ethé, Pierre Nabat, and Marc Mallet
Geosci. Model Dev., 14, 4069–4086, https://doi.org/10.5194/gmd-14-4069-2021, https://doi.org/10.5194/gmd-14-4069-2021, 2021
Short summary
Short summary
The tropical Atlantic has been facing a massive proliferation of Sargassum since 2011, with severe environmental and socioeconomic impacts. We developed a modeling framework based on the NEMO ocean model, which integrates transport by currents and waves, and physiology of Sargassum with varying internal nutrient quota, and considers stranding at the coast. Results demonstrate the ability of the model to reproduce and forecast the seasonal cycle and large-scale distribution of Sargassum biomass.
Lester Kwiatkowski, Olivier Torres, Laurent Bopp, Olivier Aumont, Matthew Chamberlain, James R. Christian, John P. Dunne, Marion Gehlen, Tatiana Ilyina, Jasmin G. John, Andrew Lenton, Hongmei Li, Nicole S. Lovenduski, James C. Orr, Julien Palmieri, Yeray Santana-Falcón, Jörg Schwinger, Roland Séférian, Charles A. Stock, Alessandro Tagliabue, Yohei Takano, Jerry Tjiputra, Katsuya Toyama, Hiroyuki Tsujino, Michio Watanabe, Akitomo Yamamoto, Andrew Yool, and Tilo Ziehn
Biogeosciences, 17, 3439–3470, https://doi.org/10.5194/bg-17-3439-2020, https://doi.org/10.5194/bg-17-3439-2020, 2020
Short summary
Short summary
We assess 21st century projections of marine biogeochemistry in the CMIP6 Earth system models. These models represent the most up-to-date understanding of climate change. The models generally project greater surface ocean warming, acidification, subsurface deoxygenation, and euphotic nitrate reductions but lesser primary production declines than the previous generation of models. This has major implications for the impact of anthropogenic climate change on marine ecosystems.
Vincent Echevin, Manon Gévaudan, Dante Espinoza-Morriberón, Jorge Tam, Olivier Aumont, Dimitri Gutierrez, and François Colas
Biogeosciences, 17, 3317–3341, https://doi.org/10.5194/bg-17-3317-2020, https://doi.org/10.5194/bg-17-3317-2020, 2020
Short summary
Short summary
The coasts of Peru encompass the richest fisheries in the entire ocean. It is therefore very important for this country to understand how the nearshore marine ecosystem may evolve under climate change. Fine-scale numerical models are very useful because they can represent precisely the evolution of key parameters such as temperature, water oxygenation, and plankton biomass. Here we study the evolution of the Peruvian marine ecosystem in the 21st century under the worst-case climate scenario.
Marie-Hélène Radenac, Julien Jouanno, Christine Carine Tchamabi, Mesmin Awo, Bernard Bourlès, Sabine Arnault, and Olivier Aumont
Biogeosciences, 17, 529–545, https://doi.org/10.5194/bg-17-529-2020, https://doi.org/10.5194/bg-17-529-2020, 2020
Short summary
Short summary
Satellite data and a remarkable set of in situ measurements show a main bloom of microscopic seaweed, the phytoplankton, in summer and a secondary bloom in December in the central equatorial Atlantic. They are driven by a strong vertical supply of nitrate in May–July and a shorter and moderate supply in November. In between, transport of low-nitrate water from the west explains most nitrate losses in the sunlit layer. Horizontal eddy-induced processes also contribute to seasonal nitrate removal.
Ndague Diogoul, Patrice Brehmer, Yannick Perrot, Maik Tiedemann, Abou Thiam, Salaheddine El Ayoubi, Anne Mouget, Chloé Migayrou, Oumar Sadio, and Abdoulaye Sarré
Ocean Sci., 16, 65–81, https://doi.org/10.5194/os-16-65-2020, https://doi.org/10.5194/os-16-65-2020, 2020
Short summary
Short summary
We characterized the water masses of the Senegalese Petite Côte and described spatial and temporal variations of SSLs in relation to their environment. SSL distributions were mainly structured by bottom depth, diel period, and the level of vertical stratification in the water column. This study serves as a precursor in the field of SSL study in the Senegalese Petite Côte and even West African coasts, hence the importance of this work.
Renaud Person, Olivier Aumont, Gurvan Madec, Martin Vancoppenolle, Laurent Bopp, and Nacho Merino
Biogeosciences, 16, 3583–3603, https://doi.org/10.5194/bg-16-3583-2019, https://doi.org/10.5194/bg-16-3583-2019, 2019
Short summary
Short summary
The Antarctic Ice Sheet is considered a possibly important but largely overlooked source of iron (Fe). Here we explore its fertilization capacity by evaluating the response of marine biogeochemistry to Fe release from icebergs and ice shelves in a global ocean model. Large regional impacts are simulated, leading to only modest primary production and carbon export increases at the scale of the Southern Ocean. Large uncertainties are due to low observational constraints on modeling choices.
Cyril Dutheil, Olivier Aumont, Thomas Gorguès, Anne Lorrain, Sophie Bonnet, Martine Rodier, Cécile Dupouy, Takuhei Shiozaki, and Christophe Menkes
Biogeosciences, 15, 4333–4352, https://doi.org/10.5194/bg-15-4333-2018, https://doi.org/10.5194/bg-15-4333-2018, 2018
Short summary
Short summary
N2 fixation is recognized as one of the major sources of nitrogen in the ocean. Thus, N2 fixation sustains a significant part of the primary production (PP) by supplying the most common limiting nutrient for phytoplankton growth. From numerical simulations, the local maximums of Trichodesmium biomass in the Pacific are found around islands, explained by the iron fluxes from island sediments. We assessed that 15 % of the PP may be due to Trichodesmium in the low-nutrient, low-chlorophyll areas.
Madhavan Girijakumari Keerthi, Matthieu Lengaigne, Marina Levy, Jerome Vialard, Vallivattathillam Parvathi, Clément de Boyer Montégut, Christian Ethé, Olivier Aumont, Iyyappan Suresh, Valiya Parambil Akhil, and Pillathu Moolayil Muraleedharan
Biogeosciences, 14, 3615–3632, https://doi.org/10.5194/bg-14-3615-2017, https://doi.org/10.5194/bg-14-3615-2017, 2017
Short summary
Short summary
The northern Arabian Sea hosts a winter chlorophyll bloom, which exhibits strong interannual variability. The processes responsible for this interannual variation of the bloom are investigated using observations and a model. The interannual fluctuations of the winter bloom are largely related to the interannual mixed-layer depth (MLD) anomalies, which are driven by net heat flux anomalies. MLD controls the bloom amplitude through a modulation of nutrient turbulent fluxes into the mixed layer.
Habib Senghor, Éric Machu, Frédéric Hourdin, and Amadou Thierno Gaye
Atmos. Chem. Phys., 17, 8395–8410, https://doi.org/10.5194/acp-17-8395-2017, https://doi.org/10.5194/acp-17-8395-2017, 2017
Short summary
Short summary
This work focus on the distribution of dust particles emitted in western Africa and having consequences on human health and marine ecosystems. The understanding of their fate requires a better understanding of the processes governing their variability. Using satellite observations and ground measurements, we present the seasonality of their distribution and explain the processes responsible for this distribution as well as their transition from the African continent towards the Atlantic Ocean.
Guillaume Le Gland, Laurent Mémery, Olivier Aumont, and Laure Resplandy
Biogeosciences, 14, 3171–3189, https://doi.org/10.5194/bg-14-3171-2017, https://doi.org/10.5194/bg-14-3171-2017, 2017
Short summary
Short summary
In this study, we computed the fluxes of radium-228 from the continental shelf to the open ocean by fitting a numerical model to observations. After determining appropriate model parameters (cost function and number of source regions), we found a lower and more precise global flux than previous estimates: 8.01–8.49×1023 atoms yr−1. This result can be used to assess nutrient and trace element fluxes to the open ocean, but we cannot identify specific pathways like submarine groundwater discharge.
James C. Orr, Raymond G. Najjar, Olivier Aumont, Laurent Bopp, John L. Bullister, Gokhan Danabasoglu, Scott C. Doney, John P. Dunne, Jean-Claude Dutay, Heather Graven, Stephen M. Griffies, Jasmin G. John, Fortunat Joos, Ingeborg Levin, Keith Lindsay, Richard J. Matear, Galen A. McKinley, Anne Mouchet, Andreas Oschlies, Anastasia Romanou, Reiner Schlitzer, Alessandro Tagliabue, Toste Tanhua, and Andrew Yool
Geosci. Model Dev., 10, 2169–2199, https://doi.org/10.5194/gmd-10-2169-2017, https://doi.org/10.5194/gmd-10-2169-2017, 2017
Short summary
Short summary
The Ocean Model Intercomparison Project (OMIP) is a model comparison effort under Phase 6 of the Coupled Model Intercomparison Project (CMIP6). Its physical component is described elsewhere in this special issue. Here we describe its ocean biogeochemical component (OMIP-BGC), detailing simulation protocols and analysis diagnostics. Simulations focus on ocean carbon, other biogeochemical tracers, air-sea exchange of CO2 and related gases, and chemical tracers used to evaluate modeled circulation.
Olivier Aumont, Marco van Hulten, Matthieu Roy-Barman, Jean-Claude Dutay, Christian Éthé, and Marion Gehlen
Biogeosciences, 14, 2321–2341, https://doi.org/10.5194/bg-14-2321-2017, https://doi.org/10.5194/bg-14-2321-2017, 2017
Short summary
Short summary
The marine biological carbon pump is dominated by the vertical transfer of particulate organic carbon (POC) from the surface ocean to its interior. In this study, we explore the impacts of a variable composition of this organic matter using a global ocean biogeochemical model. We show that accounting for a variable lability of POC increases POC concentrations by up to 2 orders of magnitude in the ocean's interior. Furthermore, the amount of carbon that reaches the sediments is twice as large.
Parvathi Vallivattathillam, Suresh Iyyappan, Matthieu Lengaigne, Christian Ethé, Jérôme Vialard, Marina Levy, Neetu Suresh, Olivier Aumont, Laure Resplandy, Hema Naik, and Wajih Naqvi
Biogeosciences, 14, 1541–1559, https://doi.org/10.5194/bg-14-1541-2017, https://doi.org/10.5194/bg-14-1541-2017, 2017
Short summary
Short summary
During late boreal summer and fall, the west coast of India (WCI) experiences hypoxia, which turns into anoxia during some years. We analyze a coupled physical–biogeochemical simulation over the 1960–2012 period to investigate the physical processes influencing oxycline interannual variability off the WCI. We show that fall WCI oxycline fluctuations are strongly related to Indian Ocean Dipole (IOD), with positive IODs preventing anoxia, while negative IODs do not necessarily result in anoxia.
Corinne Le Quéré, Erik T. Buitenhuis, Róisín Moriarty, Séverine Alvain, Olivier Aumont, Laurent Bopp, Sophie Chollet, Clare Enright, Daniel J. Franklin, Richard J. Geider, Sandy P. Harrison, Andrew G. Hirst, Stuart Larsen, Louis Legendre, Trevor Platt, I. Colin Prentice, Richard B. Rivkin, Sévrine Sailley, Shubha Sathyendranath, Nick Stephens, Meike Vogt, and Sergio M. Vallina
Biogeosciences, 13, 4111–4133, https://doi.org/10.5194/bg-13-4111-2016, https://doi.org/10.5194/bg-13-4111-2016, 2016
Short summary
Short summary
We present a global biogeochemical model which incorporates ecosystem dynamics based on the representation of ten plankton functional types, and use the model to assess the relative roles of iron vs. grazing in determining phytoplankton biomass in the Southern Ocean. Our results suggest that observed low phytoplankton biomass in the Southern Ocean during summer is primarily explained by the dynamics of the Southern Ocean zooplankton community, despite iron limitation of phytoplankton growth.
Roland Séférian, Marion Gehlen, Laurent Bopp, Laure Resplandy, James C. Orr, Olivier Marti, John P. Dunne, James R. Christian, Scott C. Doney, Tatiana Ilyina, Keith Lindsay, Paul R. Halloran, Christoph Heinze, Joachim Segschneider, Jerry Tjiputra, Olivier Aumont, and Anastasia Romanou
Geosci. Model Dev., 9, 1827–1851, https://doi.org/10.5194/gmd-9-1827-2016, https://doi.org/10.5194/gmd-9-1827-2016, 2016
Short summary
Short summary
This paper explores how the large diversity in spin-up protocols used for ocean biogeochemistry in CMIP5 models contributed to inter-model differences in modeled fields. We show that a link between spin-up duration and skill-score metrics emerges from both individual IPSL-CM5A-LR's results and an ensemble of CMIP5 models. Our study suggests that differences in spin-up protocols constitute a source of inter-model uncertainty which would require more attention in future intercomparison exercises.
Roland Séférian, Christine Delire, Bertrand Decharme, Aurore Voldoire, David Salas y Melia, Matthieu Chevallier, David Saint-Martin, Olivier Aumont, Jean-Christophe Calvet, Dominique Carrer, Hervé Douville, Laurent Franchistéguy, Emilie Joetzjer, and Séphane Sénési
Geosci. Model Dev., 9, 1423–1453, https://doi.org/10.5194/gmd-9-1423-2016, https://doi.org/10.5194/gmd-9-1423-2016, 2016
Short summary
Short summary
This paper presents the first IPCC-class Earth system model developed at Centre National de Recherches Météorologiques (CNRM-ESM1). We detail how the various carbon reservoirs were initialized and analyze the behavior of the carbon cycle and its prominent physical drivers, comparing model results to the most up-to-date climate and carbon cycle dataset over the latest decades.
O. Aumont, C. Ethé, A. Tagliabue, L. Bopp, and M. Gehlen
Geosci. Model Dev., 8, 2465–2513, https://doi.org/10.5194/gmd-8-2465-2015, https://doi.org/10.5194/gmd-8-2465-2015, 2015
K. B. Rodgers, O. Aumont, S. E. Mikaloff Fletcher, Y. Plancherel, L. Bopp, C. de Boyer Montégut, D. Iudicone, R. F. Keeling, G. Madec, and R. Wanninkhof
Biogeosciences, 11, 4077–4098, https://doi.org/10.5194/bg-11-4077-2014, https://doi.org/10.5194/bg-11-4077-2014, 2014
I. Borrione, O. Aumont, M. C. Nielsdóttir, and R. Schlitzer
Biogeosciences, 11, 1981–2001, https://doi.org/10.5194/bg-11-1981-2014, https://doi.org/10.5194/bg-11-1981-2014, 2014
M. Ishii, R. A. Feely, K. B. Rodgers, G.-H. Park, R. Wanninkhof, D. Sasano, H. Sugimoto, C. E. Cosca, S. Nakaoka, M. Telszewski, Y. Nojiri, S. E. Mikaloff Fletcher, Y. Niwa, P. K. Patra, V. Valsala, H. Nakano, I. Lima, S. C. Doney, E. T. Buitenhuis, O. Aumont, J. P. Dunne, A. Lenton, and T. Takahashi
Biogeosciences, 11, 709–734, https://doi.org/10.5194/bg-11-709-2014, https://doi.org/10.5194/bg-11-709-2014, 2014
J. C. Currie, M. Lengaigne, J. Vialard, D. M. Kaplan, O. Aumont, S. W. A. Naqvi, and O. Maury
Biogeosciences, 10, 6677–6698, https://doi.org/10.5194/bg-10-6677-2013, https://doi.org/10.5194/bg-10-6677-2013, 2013
Related subject area
Biogeochemistry: Coastal Ocean
Ocean alkalinity enhancement (OAE) does not cause cellular stress in a phytoplankton community of the subtropical Atlantic Ocean
Reviews and syntheses: On increasing hypoxia in eastern boundary upwelling systems – zooplankton under metabolic stress
Technical note: Testing a new approach for the determination of N2 fixation rates by coupling a membrane equilibrator to a mass spectrometer for long-term observations
Long-term variations in pH in coastal waters along the Korean Peninsula
The effect of carbonate mineral additions on biogeochemical conditions in surface sediments and benthic–pelagic exchange fluxes
Evaluating ocean alkalinity enhancement as a carbon dioxide removal strategy in the North Sea
Assessing the impacts of simulated ocean alkalinity enhancement on viability and growth of nearshore species of phytoplankton
Responses of microbial metabolic rates to non-equilibrated silicate- versus calcium-based ocean alkalinity enhancement
High metabolic zinc demand within native Amundsen and Ross sea phytoplankton communities determined by stable isotope uptake rate measurements
The influence of zooplankton and oxygen on the particulate organic carbon flux in the Benguela Upwelling System
Reviews and syntheses: Biological indicators of low-oxygen stress in marine water-breathing animals
Temperature-enhanced effects of iron on Southern Ocean phytoplankton
Riverine nutrient impact on global ocean nitrogen cycle feedbacks and marine primary production in an Earth system model
Effects of Submarine Groundwater on Nutrient Concentration and Primary Production in a Deep Bay of the Japan Sea
The Northeast Greenland Shelf as a potential late-summer CO2 source to the atmosphere
Spring-neap tidal cycles modulate the strength of the carbon source at the estuary-coast interface
Technical note: Ocean Alkalinity Enhancement Pelagic Impact Intercomparison Project (OAEPIIP)
Estimates of carbon sequestration potential in an expanding Arctic fjord (Hornsund, Svalbard) affected by dark plumes of glacial meltwater
An assessment of ocean alkalinity enhancement using aqueous hydroxides: kinetics, efficiency, and precipitation thresholds
Dissolved nitric oxide in the lower Elbe Estuary and the Port of Hamburg area
The bacteria-protist link as a main route of dissolved organic matter across contrasting productivity areas in the Patagonian Shelf
Variable contribution of wastewater treatment plant effluents to downstream nitrous oxide concentrations and emissions
Depositional controls and budget of organic carbon burial in fine-grained sediments of the North Sea – the Helgoland Mud Area as a test field
Improved understanding of eutrophication trends, indicators and problem areas using machine learning
Distribution of nutrients and dissolved organic matter in a eutrophic equatorial estuary: the Johor River and the East Johor Strait
Amplified bottom water acidification rates on the Bering Sea shelf from 1970–2022
Investigating the effect of silicate- and calcium-based ocean alkalinity enhancement on diatom silicification
Ocean alkalinity enhancement using sodium carbonate salts does not lead to measurable changes in Fe dynamics in a mesocosm experiment
Quantification and mitigation of bottom-trawling impacts on sedimentary organic carbon stocks in the North Sea
Influence of ocean alkalinity enhancement with olivine or steel slag on a coastal plankton community in Tasmania
Multi-model comparison of trends and controls of near-bed oxygen concentration on the northwest European continental shelf under climate change
Picoplanktonic methane production in eutrophic surface waters
Vertical mixing alleviates autumnal oxygen deficiency in the central North Sea
Hypoxia also occurs in small highly turbid estuaries: the example of the Charente (Bay of Biscay)
Seasonality and response of ocean acidification and hypoxia to major environmental anomalies in the southern Salish Sea, North America (2014–2018)
Oceanographic processes driving low-oxygen conditions inside Patagonian fjords
Above- and belowground plant mercury dynamics in a salt marsh estuary in Massachusetts, USA
Variability and drivers of carbonate chemistry at shellfish aquaculture sites in the Salish Sea, British Columbia
Unusual Hemiaulus bloom influences ocean productivity in Northeastern US Shelf waters
Insights into carbonate environmental conditions in the Chukchi Sea
UAV approaches for improved mapping of vegetation cover and estimation of carbon storage of small saltmarshes: examples from Loch Fleet, northeast Scotland
Iron “ore” nothing: benthic iron fluxes from the oxygen-deficient Santa Barbara Basin enhance phytoplankton productivity in surface waters
Marine anoxia initiates giant sulfur-oxidizing bacterial mat proliferation and associated changes in benthic nitrogen, sulfur, and iron cycling in the Santa Barbara Basin, California Borderland
Uncertainty in the evolution of northwestern North Atlantic circulation leads to diverging biogeochemical projections
The additionality problem of ocean alkalinity enhancement
Short-term variation in pH in seawaters around coastal areas of Japan: characteristics and forcings
Revisiting the applicability and constraints of molybdenum- and uranium-based paleo redox proxies: comparing two contrasting sill fjords
Influence of a small submarine canyon on biogenic matter export flux in the lower St. Lawrence Estuary, eastern Canada
Single-celled bioturbators: benthic foraminifera mediate oxygen penetration and prokaryotic diversity in intertidal sediment
Assessing impacts of coastal warming, acidification, and deoxygenation on Pacific oyster (Crassostrea gigas) farming: a case study in the Hinase area, Okayama Prefecture, and Shizugawa Bay, Miyagi Prefecture, Japan
Librada Ramírez, Leonardo J. Pozzo-Pirotta, Aja Trebec, Víctor Manzanares-Vázquez, José L. Díez, Javier Arístegui, Ulf Riebesell, Stephen D. Archer, and María Segovia
Biogeosciences, 22, 1865–1886, https://doi.org/10.5194/bg-22-1865-2025, https://doi.org/10.5194/bg-22-1865-2025, 2025
Short summary
Short summary
We studied the potential effects of increasing ocean alkalinity on a natural plankton community in subtropical waters of the Atlantic near Gran Canaria, Spain. Alkalinity is the capacity of water to resist acidification, and plankton are usually microscopic plants (phytoplankton) and animals (zooplankton), often less than 2.5 cm in length. This study suggests that increasing ocean alkalinity did not have a significant negative impact on the plankton community studied.
Leissing Frederick, Mauricio A. Urbina, and Ruben Escribano
Biogeosciences, 22, 1839–1852, https://doi.org/10.5194/bg-22-1839-2025, https://doi.org/10.5194/bg-22-1839-2025, 2025
Short summary
Short summary
Evidence shows that due to global warming, zooplankton inhabiting the coastal upwelling zone are exposed to increasing hypoxia affecting their physiology, metabolism, and population dynamics. The adaptive responses of zooplankton to cope with mild/severe hypoxia may depend on trade-offs with other metabolic/energy demands, implying less energy for growth, feeding, and reproduction, with ecological consequences for the zooplankton population and the marine food web.
Sören Iwe, Oliver Schmale, and Bernd Schneider
Biogeosciences, 22, 1767–1779, https://doi.org/10.5194/bg-22-1767-2025, https://doi.org/10.5194/bg-22-1767-2025, 2025
Short summary
Short summary
We present a novel method for quantifying N2 fixation by cyanobacteria, which is crucial in Baltic Sea eutrophication. Our Gas Equilibrium – Membrane-Inlet Mass Spectrometer (GE-MIMS), designed for operation on voluntary observing ships (VOSs), enables large-scale monitoring of surface water N2 depletion caused by N2 fixation. Laboratory tests confirm the device’s accuracy and precision, ensuring that it can complement current methods and contribute valuable data for better understanding N2 fixation in the Baltic Sea.
Yong-Woo Lee, Mi-Ok Park, Seong-Gil Kim, Tae-Hoon Kim, Yong Hwa Oh, Sang Heon Lee, and DongJoo Joung
Biogeosciences, 22, 675–690, https://doi.org/10.5194/bg-22-675-2025, https://doi.org/10.5194/bg-22-675-2025, 2025
Short summary
Short summary
Long-term pH variation in coastal waters along the Korean Peninsula was assessed for the first time, and it exhibited no significant pH change over an 11-year period. This contrasts with the ongoing pH decline in open oceans and other coastal areas. Analysis of environmental data showed that pH is mainly controlled by dissolved oxygen in bottom waters. This suggests that ocean warming could cause a pH decline in Korean coastal waters, affecting many fish and seaweed aquaculture operations.
Kadir Biçe, Tristen Myers Stewart, George G. Waldbusser, and Christof Meile
Biogeosciences, 22, 641–657, https://doi.org/10.5194/bg-22-641-2025, https://doi.org/10.5194/bg-22-641-2025, 2025
Short summary
Short summary
We studied the effect of addition of carbonate minerals on coastal sediments. We carried out laboratory experiments to quantify the dissolution kinetics and integrated these observations into a numerical model that describes biogeochemical cycling in surficial sediments. Using the model, we demonstrate the buffering effect of the mineral additions and their duration. We quantify the effect under different environmental conditions and assess the potential for increased atmospheric CO2 uptake.
Feifei Liu, Ute Daewel, Jan Kossack, Kubilay Timur Demir, Helmuth Thomas, and Corinna Schrum
EGUsphere, https://doi.org/10.5194/egusphere-2025-81, https://doi.org/10.5194/egusphere-2025-81, 2025
Short summary
Short summary
Ocean Alkalinity Enhancement boosts oceanic CO₂ absorption, offering a climate solution. Using a regional model, we examined OAE in the North Sea, revealing that shallow coastal areas achieve higher CO₂ uptake than offshore, where alkalinity is more susceptible to deep-ocean loss. Long-term carbon storage is limited, and pH shifts vary by location. Our findings guide OAE deployment to optimize carbon removal while minimizing ecological effects, supporting global climate mitigation efforts.
Jessica L. Oberlander, Mackenzie E. Burke, Cat A. London, and Hugh L. MacIntyre
Biogeosciences, 22, 499–512, https://doi.org/10.5194/bg-22-499-2025, https://doi.org/10.5194/bg-22-499-2025, 2025
Short summary
Short summary
Ocean alkalinity enhancement (OAE) is a promising negative emission technology that results in the net sequestration of atmospheric carbon. In this paper, we assess the potential impact of OAE on phytoplankton through an analysis of prior studies and the effects of simulated OAE on photosynthetic competence. Our findings suggest that there may be little if any significant impact on most phytoplankton studied to date if OAE is conducted in well-flushed, nearshore environments.
Laura Marín-Samper, Javier Arístegui, Nauzet Hernández-Hernández, and Ulf Riebesell
Biogeosciences, 21, 5707–5724, https://doi.org/10.5194/bg-21-5707-2024, https://doi.org/10.5194/bg-21-5707-2024, 2024
Short summary
Short summary
This study exposed a natural community to two non-CO2-equilibrated ocean alkalinity enhancement (OAE) deployments using different minerals. Adding alkalinity in this manner decreases dissolved CO2, essential for photosynthesis. While photosynthesis was not suppressed, bloom formation was mildly delayed, potentially impacting marine food webs. The study emphasizes the need for further research on OAE without prior equilibration and on its ecological implications.
Riss M. Kell, Rebecca J. Chmiel, Deepa Rao, Dawn M. Moran, Matthew R. McIlvin, Tristan J. Horner, Nicole L. Schanke, Ichiko Sugiyama, Robert B. Dunbar, Giacomo R. DiTullio, and Mak A. Saito
Biogeosciences, 21, 5685–5706, https://doi.org/10.5194/bg-21-5685-2024, https://doi.org/10.5194/bg-21-5685-2024, 2024
Short summary
Short summary
Despite interest in modeling the biogeochemical uptake and cycling of the trace metal zinc (Zn), measurements of Zn uptake in natural marine phytoplankton communities have not been conducted previously. To fill this gap, we employed a stable isotope uptake rate measurement method to quantify Zn uptake into natural phytoplankton assemblages within the Southern Ocean. Zn demand was high and rapid enough to depress the inventory of Zn available to phytoplankton on seasonal timescales.
Luisa Chiara Meiritz, Tim Rixen, Anja Karin van der Plas, Tarron Lamont, and Niko Lahajnar
Biogeosciences, 21, 5261–5276, https://doi.org/10.5194/bg-21-5261-2024, https://doi.org/10.5194/bg-21-5261-2024, 2024
Short summary
Short summary
Moored and drifting sediment trap experiments in the northern (nBUS) and southern (sBUS) Benguela Upwelling System showed that active carbon fluxes by vertically migrating zooplankton were about 3 times higher in the sBUS than in the nBUS. Despite these large variabilities, the mean passive particulate organic carbon (POC) fluxes were almost equal in the two subsystems. The more intense near-bottom oxygen minimum layer seems to lead to higher POC fluxes and accumulation rates in the nBUS.
Michael R. Roman, Andrew H. Altieri, Denise Breitburg, Erica M. Ferrer, Natalya D. Gallo, Shin-ichi Ito, Karin Limburg, Kenneth Rose, Moriaki Yasuhara, and Lisa A. Levin
Biogeosciences, 21, 4975–5004, https://doi.org/10.5194/bg-21-4975-2024, https://doi.org/10.5194/bg-21-4975-2024, 2024
Short summary
Short summary
Oxygen-depleted ocean waters have increased worldwide. In order to improve our understanding of the impacts of this oxygen loss on marine life it is essential that we develop reliable indicators that track the negative impacts of low oxygen. We review various indicators of low-oxygen stress for marine animals including their use, research needs, and application to confront the challenges of ocean oxygen loss.
Charlotte Eich, Mathijs van Manen, J. Scott P. McCain, Loay J. Jabre, Willem H. van de Poll, Jinyoung Jung, Sven B. E. H. Pont, Hung-An Tian, Indah Ardiningsih, Gert-Jan Reichart, Erin M. Bertrand, Corina P. D. Brussaard, and Rob Middag
Biogeosciences, 21, 4637–4663, https://doi.org/10.5194/bg-21-4637-2024, https://doi.org/10.5194/bg-21-4637-2024, 2024
Short summary
Short summary
Phytoplankton growth in the Southern Ocean (SO) is often limited by low iron (Fe) concentrations. Sea surface warming impacts Fe availability and can affect phytoplankton growth. We used shipboard Fe clean incubations to test how changes in Fe and temperature affect SO phytoplankton. Their abundances usually increased with Fe addition and temperature increase, with Fe being the major factor. These findings imply potential shifts in ecosystem structure, impacting food webs and elemental cycling.
Miriam Tivig, David P. Keller, and Andreas Oschlies
Biogeosciences, 21, 4469–4493, https://doi.org/10.5194/bg-21-4469-2024, https://doi.org/10.5194/bg-21-4469-2024, 2024
Short summary
Short summary
Marine biological production is highly dependent on the availability of nitrogen and phosphorus. Rivers are the main source of phosphorus to the oceans but poorly represented in global model oceans. We include dissolved nitrogen and phosphorus from river export in a global model ocean and find that the addition of riverine phosphorus affects marine biology on millennial timescales more than riverine nitrogen alone. Globally, riverine phosphorus input increases primary production rates.
Menghong Dong, Xinyu Guo, Takuya Matsuura, Taichi Tebakari, and Jing Zhang
EGUsphere, https://doi.org/10.5194/egusphere-2024-2581, https://doi.org/10.5194/egusphere-2024-2581, 2024
Short summary
Short summary
Submarine groundwater discharge (SGD), a common coastal hydrological process that involves submarine inflow of groundwater into the sea, is associated with a large nutrient load. To clarify the distribution of SGD-derived nutrients after release at the bottom of the sea and their contribution to phytoplankton growth in the marine ecosystem, we modeled the SGD process in Toyama Bay using a specialized computer code that can distinguish SGD-derived nutrients from nutrients from other sources.
Esdoorn Willcox, Marcos Lemes, Thomas Juul-Pedersen, Mikael Kristian Sejr, Johnna Marchiano Holding, and Søren Rysgaard
Biogeosciences, 21, 4037–4050, https://doi.org/10.5194/bg-21-4037-2024, https://doi.org/10.5194/bg-21-4037-2024, 2024
Short summary
Short summary
In this work, we measured the chemistry of seawater from samples obtained from different depths and locations off the east coast of the Northeast Greenland National Park to determine what is influencing concentrations of dissolved CO2. Historically, the region has always been thought to take up CO2 from the atmosphere, but we show that it is possible for the region to become a source in late summer. We discuss the variables that may be related to such changes.
Vlad A. Macovei, Louise C. V. Rewrie, Rüdiger Röttgers, and Yoana G. Voynova
EGUsphere, https://doi.org/10.5194/egusphere-2024-2643, https://doi.org/10.5194/egusphere-2024-2643, 2024
Short summary
Short summary
A commercial vessel equipped with scientific instruments regularly travelled between two large macro-tidal estuaries. We found that biogeochemical variability in the outer estuaries is driven by the 14-day spring-neap tidal cycle, with strong effects on dissolved inorganic and organic carbon concentrations and distribution. Since this land-sea interface effect increases the strength of the carbon source to the atmosphere by 74 % during spring tide, it should be accounted for in regional models.
Lennart Thomas Bach, Aaron James Ferderer, Julie LaRoche, and Kai Georg Schulz
Biogeosciences, 21, 3665–3676, https://doi.org/10.5194/bg-21-3665-2024, https://doi.org/10.5194/bg-21-3665-2024, 2024
Short summary
Short summary
Ocean alkalinity enhancement (OAE) is an emerging marine CO2 removal method, but its environmental effects are insufficiently understood. The OAE Pelagic Impact Intercomparison Project (OAEPIIP) provides funding for a standardized and globally replicated microcosm experiment to study the effects of OAE on plankton communities. Here, we provide a detailed manual for the OAEPIIP experiment. We expect OAEPIIP to help build scientific consensus on the effects of OAE on plankton.
Marlena Szeligowska, Déborah Benkort, Anna Przyborska, Mateusz Moskalik, Bernabé Moreno, Emilia Trudnowska, and Katarzyna Błachowiak-Samołyk
Biogeosciences, 21, 3617–3639, https://doi.org/10.5194/bg-21-3617-2024, https://doi.org/10.5194/bg-21-3617-2024, 2024
Short summary
Short summary
The European Arctic is experiencing rapid regional warming, causing glaciers that terminate in the sea to retreat onto land. Due to this process, the area of a well-studied fjord, Hornsund, has increased by around 100 km2 (40%) since 1976. Combining satellite and in situ data with a mathematical model, we estimated that, despite some negative consequences of glacial meltwater release, such emerging coastal waters could mitigate climate change by increasing carbon uptake and storage by sediments.
Mallory C. Ringham, Nathan Hirtle, Cody Shaw, Xi Lu, Julian Herndon, Brendan R. Carter, and Matthew D. Eisaman
Biogeosciences, 21, 3551–3570, https://doi.org/10.5194/bg-21-3551-2024, https://doi.org/10.5194/bg-21-3551-2024, 2024
Short summary
Short summary
Ocean alkalinity enhancement leverages the large surface area and carbon storage capacity of the oceans to store atmospheric CO2 as dissolved bicarbonate. We monitored CO2 uptake in seawater treated with NaOH to establish operational boundaries for carbon removal experiments. Results show that CO2 equilibration occurred on the order of weeks to months, was consistent with values expected from equilibration calculations, and was limited by mineral precipitation at high pH and CaCO3 saturation.
Riel Carlo O. Ingeniero, Gesa Schulz, and Hermann W. Bange
Biogeosciences, 21, 3425–3440, https://doi.org/10.5194/bg-21-3425-2024, https://doi.org/10.5194/bg-21-3425-2024, 2024
Short summary
Short summary
Our research is the first to measure dissolved NO concentrations in temperate estuarine waters, providing insights into its distribution under varying conditions and enhancing our understanding of its production processes. Dissolved NO was supersaturated in the Elbe Estuary, indicating that it is a source of atmospheric NO. The observed distribution of dissolved NO most likely resulted from nitrification.
Celeste López-Abbate, John E. Garzón-Cardona, Ricardo Silva, Juan-Carlos Molinero, Laura A. Ruiz-Etcheverry, Ana M. Martínez, Azul S. Gilabert, and Rubén J. Lara
EGUsphere, https://doi.org/10.5194/egusphere-2024-1860, https://doi.org/10.5194/egusphere-2024-1860, 2024
Short summary
Short summary
This study examines how microbial community structure, growth, and grazing impact the DOM pool in the Patagonian Shelf. Despite higher phytoplankton biomass, faster-growing bacteria were selectively grazed by protists leading to DOM accumulation, likely due to a reduction in DOM-consuming bacteria and the addition of egestion compounds. Experimental data showed that while bacteria remained as the primarily shapers of DOM quality, grazing pressure impacted on DOM accumulation.
Weiyi Tang, Jeff Talbott, Timothy Jones, and Bess B. Ward
Biogeosciences, 21, 3239–3250, https://doi.org/10.5194/bg-21-3239-2024, https://doi.org/10.5194/bg-21-3239-2024, 2024
Short summary
Short summary
Wastewater treatment plants (WWTPs) are known to be hotspots of greenhouse gas emissions. However, the impact of WWTPs on the emission of the greenhouse gas N2O in downstream aquatic environments is less constrained. We found spatially and temporally variable but overall higher N2O concentrations and fluxes in waters downstream of WWTPs, pointing to the need for efficient N2O removal in addition to the treatment of nitrogen in WWTPs.
Daniel Müller, Bo Liu, Walter Geibert, Moritz Holtappels, Lasse Sander, Elda Miramontes, Heidi Taubner, Susann Henkel, Kai-Uwe Hinrichs, Denise Bethke, Ingrid Dohrmann, and Sabine Kasten
EGUsphere, https://doi.org/10.5194/egusphere-2024-1632, https://doi.org/10.5194/egusphere-2024-1632, 2024
Short summary
Short summary
Coastal and shelf sediments are the most important sinks for organic carbon (OC) on Earth. We produced a new high-resolution sediment and pore-water dataset from the Helgoland Mud Area (HMA), North Sea, to determine, which depositional factors control the preservation of OC. The burial efficiency is highest in an area of high sedimentation and terrigenous OC. The HMA covers 0.09 % of the North Sea, but accounts for 0.76 % of its OC accumulation, highlighting the importance of the depocentre.
Deep S. Banerjee and Jozef Skakala
EGUsphere, https://doi.org/10.22541/essoar.171405637.76928549/v1, https://doi.org/10.22541/essoar.171405637.76928549/v1, 2024
Short summary
Short summary
Nitrate is a crucial nutrient in oceans. Excess nutrients can trigger uncontrolled algae growth (eutrophication), damaging marine ecosystems. We used a machine learning tool to generate a skilled, gap-free, bi-decadal surface nitrate dataset from sparse observations. This dataset reveals areas on the North West European Shelf at risk of eutrophication, bi-decadal trends in coastal nitrate, and an impact of winter nitrate on spring phytoplankton blooms.
Amanda Y. L. Cheong, Kogila Vani Annammala, Ee Ling Yong, Yongli Zhou, Robert S. Nichols, and Patrick Martin
Biogeosciences, 21, 2955–2971, https://doi.org/10.5194/bg-21-2955-2024, https://doi.org/10.5194/bg-21-2955-2024, 2024
Short summary
Short summary
We measured nutrients and dissolved organic matter for 1 year in a eutrophic tropical estuary to understand their sources and cycling. Our data show that the dissolved organic matter originates partly from land and partly from microbial processes in the water. Internal recycling is likely important for maintaining high nutrient concentrations, and we found that there is often excess nitrogen compared to silicon and phosphorus. Our data help to explain how eutrophication persists in this system.
Darren Pilcher, Jessica Cross, Natalie Monacci, Linquan Mu, Kelly Kearney, Albert Hermann, and Wei Cheng
EGUsphere, https://doi.org/10.5194/egusphere-2024-1096, https://doi.org/10.5194/egusphere-2024-1096, 2024
Short summary
Short summary
The Bering Sea shelf is a highly productive marine ecosystem that is vulnerable to ocean acidification. We use a computational model to simulate the carbon cycle and acidification rates from 1970–2022. The results suggest that bottom water acidification rates are more than twice as great as surface rates. Bottom waters are also naturally more acidic, thus these waters will pass key thresholds known to negatively impact marine organisms, such as red king crab, much sooner than surface waters.
Aaron Ferderer, Kai G. Schulz, Ulf Riebesell, Kirralee G. Baker, Zanna Chase, and Lennart T. Bach
Biogeosciences, 21, 2777–2794, https://doi.org/10.5194/bg-21-2777-2024, https://doi.org/10.5194/bg-21-2777-2024, 2024
Short summary
Short summary
Ocean alkalinity enhancement (OAE) is a promising method of atmospheric carbon removal; however, its ecological impacts remain largely unknown. We assessed the effects of simulated silicate- and calcium-based mineral OAE on diatom silicification. We found that increased silicate concentrations from silicate-based OAE increased diatom silicification. In contrast, the enhancement of alkalinity had no effect on community silicification and minimal effects on the silicification of different genera.
David González-Santana, María Segovia, Melchor González-Dávila, Librada Ramírez, Aridane G. González, Leonardo J. Pozzo-Pirotta, Veronica Arnone, Victor Vázquez, Ulf Riebesell, and J. Magdalena Santana-Casiano
Biogeosciences, 21, 2705–2715, https://doi.org/10.5194/bg-21-2705-2024, https://doi.org/10.5194/bg-21-2705-2024, 2024
Short summary
Short summary
In a recent experiment off the coast of Gran Canaria (Spain), scientists explored a method called ocean alkalinization enhancement (OAE), where carbonate minerals were added to seawater. This process changed the levels of certain ions in the water, affecting its pH and buffering capacity. The researchers were particularly interested in how this could impact the levels of essential trace metals in the water.
Lucas Porz, Wenyan Zhang, Nils Christiansen, Jan Kossack, Ute Daewel, and Corinna Schrum
Biogeosciences, 21, 2547–2570, https://doi.org/10.5194/bg-21-2547-2024, https://doi.org/10.5194/bg-21-2547-2024, 2024
Short summary
Short summary
Seafloor sediments store a large amount of carbon, helping to naturally regulate Earth's climate. If disturbed, some sediment particles can turn into CO2, but this effect is not well understood. Using computer simulations, we found that bottom-contacting fishing gears release about 1 million tons of CO2 per year in the North Sea, one of the most heavily fished regions globally. We show how protecting certain areas could reduce these emissions while also benefitting seafloor-living animals.
Jiaying A. Guo, Robert F. Strzepek, Kerrie M. Swadling, Ashley T. Townsend, and Lennart T. Bach
Biogeosciences, 21, 2335–2354, https://doi.org/10.5194/bg-21-2335-2024, https://doi.org/10.5194/bg-21-2335-2024, 2024
Short summary
Short summary
Ocean alkalinity enhancement aims to increase atmospheric CO2 sequestration by adding alkaline materials to the ocean. We assessed the environmental effects of olivine and steel slag powder on coastal plankton. Overall, slag is more efficient than olivine in releasing total alkalinity and, thus, in its ability to sequester CO2. Slag also had less environmental effect on the enclosed plankton communities when considering its higher CO2 removal potential based on this 3-week experiment.
Giovanni Galli, Sarah Wakelin, James Harle, Jason Holt, and Yuri Artioli
Biogeosciences, 21, 2143–2158, https://doi.org/10.5194/bg-21-2143-2024, https://doi.org/10.5194/bg-21-2143-2024, 2024
Short summary
Short summary
This work shows that, under a high-emission scenario, oxygen concentration in deep water of parts of the North Sea and Celtic Sea can become critically low (hypoxia) towards the end of this century. The extent and frequency of hypoxia depends on the intensity of climate change projected by different climate models. This is the result of a complex combination of factors like warming, increase in stratification, changes in the currents and changes in biological processes.
Sandy E. Tenorio and Laura Farías
Biogeosciences, 21, 2029–2050, https://doi.org/10.5194/bg-21-2029-2024, https://doi.org/10.5194/bg-21-2029-2024, 2024
Short summary
Short summary
Time series studies show that CH4 is highly dynamic on the coastal ocean surface and planktonic communities are linked to CH4 accumulation, as found in coastal upwelling off Chile. We have identified the crucial role of picoplankton (> 3 µm) in CH4 recycling, especially with the addition of methylated substrates (trimethylamine and methylphosphonic acid) during upwelling and non-upwelling periods. These insights improve understanding of surface ocean CH4 recycling, aiding CH4 emission estimates.
Charlotte A. J. Williams, Tom Hull, Jan Kaiser, Claire Mahaffey, Naomi Greenwood, Matthew Toberman, and Matthew R. Palmer
Biogeosciences, 21, 1961–1971, https://doi.org/10.5194/bg-21-1961-2024, https://doi.org/10.5194/bg-21-1961-2024, 2024
Short summary
Short summary
Oxygen (O2) is a key indicator of ocean health. The risk of O2 loss in the productive coastal/continental slope regions is increasing. Autonomous underwater vehicles equipped with O2 optodes provide lots of data but have problems resolving strong vertical O2 changes. Here we show how to overcome this and calculate how much O2 is supplied to the low-O2 bottom waters via mixing. Bursts in mixing supply nearly all of the O2 to bottom waters in autumn, stopping them reaching ecologically low levels.
Sabine Schmidt and Ibrahima Iris Diallo
Biogeosciences, 21, 1785–1800, https://doi.org/10.5194/bg-21-1785-2024, https://doi.org/10.5194/bg-21-1785-2024, 2024
Short summary
Short summary
Along the French coast facing the Bay of Biscay, the large Gironde and Loire estuaries suffer from hypoxia. This prompted a study of the small Charente estuary located between them. This work reveals a minimum oxygen zone in the Charente estuary, which extends for about 25 km. Temperature is the main factor controlling the hypoxia. This calls for the monitoring of small turbid macrotidal estuaries that are vulnerable to hypoxia, a risk expected to increase with global warming.
Simone R. Alin, Jan A. Newton, Richard A. Feely, Samantha Siedlecki, and Dana Greeley
Biogeosciences, 21, 1639–1673, https://doi.org/10.5194/bg-21-1639-2024, https://doi.org/10.5194/bg-21-1639-2024, 2024
Short summary
Short summary
We provide a new multi-stressor data product that allows us to characterize the seasonality of temperature, O2, and CO2 in the southern Salish Sea and delivers insights into the impacts of major marine heatwave and precipitation anomalies on regional ocean acidification and hypoxia. We also describe the present-day frequencies of temperature, O2, and ocean acidification conditions that cross thresholds of sensitive regional species that are economically or ecologically important.
Pamela Linford, Iván Pérez-Santos, Paulina Montero, Patricio A. Díaz, Claudia Aracena, Elías Pinilla, Facundo Barrera, Manuel Castillo, Aida Alvera-Azcárate, Mónica Alvarado, Gabriel Soto, Cécile Pujol, Camila Schwerter, Sara Arenas-Uribe, Pilar Navarro, Guido Mancilla-Gutiérrez, Robinson Altamirano, Javiera San Martín, and Camila Soto-Riquelme
Biogeosciences, 21, 1433–1459, https://doi.org/10.5194/bg-21-1433-2024, https://doi.org/10.5194/bg-21-1433-2024, 2024
Short summary
Short summary
The Patagonian fjords comprise a world region where low-oxygen water and hypoxia conditions are observed. An in situ dataset was used to quantify the mechanism involved in the presence of these conditions in northern Patagonian fjords. Water mass analysis confirmed the contribution of Equatorial Subsurface Water in the advection of the low-oxygen water, and hypoxic conditions occurred when the community respiration rate exceeded the gross primary production.
Ting Wang, Buyun Du, Inke Forbrich, Jun Zhou, Joshua Polen, Elsie M. Sunderland, Prentiss H. Balcom, Celia Chen, and Daniel Obrist
Biogeosciences, 21, 1461–1476, https://doi.org/10.5194/bg-21-1461-2024, https://doi.org/10.5194/bg-21-1461-2024, 2024
Short summary
Short summary
The strong seasonal increases of Hg in aboveground biomass during the growing season and the lack of changes observed after senescence in this salt marsh ecosystem suggest physiologically controlled Hg uptake pathways. The Hg sources found in marsh aboveground tissues originate from a mix of sources, unlike terrestrial ecosystems, where atmospheric GEM is the main source. Belowground plant tissues mostly take up Hg from soils. Overall, the salt marsh currently serves as a small net Hg sink.
Eleanor Simpson, Debby Ianson, Karen E. Kohfeld, Ana C. Franco, Paul A. Covert, Marty Davelaar, and Yves Perreault
Biogeosciences, 21, 1323–1353, https://doi.org/10.5194/bg-21-1323-2024, https://doi.org/10.5194/bg-21-1323-2024, 2024
Short summary
Short summary
Shellfish aquaculture operates in nearshore areas where data on ocean acidification parameters are limited. We show daily and seasonal variability in pH and saturation states of calcium carbonate at nearshore aquaculture sites in British Columbia, Canada, and determine the contributing drivers of this variability. We find that nearshore locations have greater variability than open waters and that the uptake of carbon by phytoplankton is the major driver of pH and saturation state variability.
S. Alejandra Castillo Cieza, Rachel H. R. Stanley, Pierre Marrec, Diana N. Fontaine, E. Taylor Crockford, Dennis J. McGillicuddy Jr., Arshia Mehta, Susanne Menden-Deuer, Emily E. Peacock, Tatiana A. Rynearson, Zoe O. Sandwith, Weifeng Zhang, and Heidi M. Sosik
Biogeosciences, 21, 1235–1257, https://doi.org/10.5194/bg-21-1235-2024, https://doi.org/10.5194/bg-21-1235-2024, 2024
Short summary
Short summary
The coastal ocean in the northeastern USA provides many services, including fisheries and habitats for threatened species. In summer 2019, a bloom occurred of a large unusual phytoplankton, the diatom Hemiaulus, with nitrogen-fixing symbionts. This led to vast changes in productivity and grazing rates in the ecosystem. This work shows that the emergence of one species can have profound effects on ecosystem function. Such changes may become more prevalent as the ocean warms due to climate change.
Claudine Hauri, Brita Irving, Sam Dupont, Rémi Pagés, Donna D. W. Hauser, and Seth L. Danielson
Biogeosciences, 21, 1135–1159, https://doi.org/10.5194/bg-21-1135-2024, https://doi.org/10.5194/bg-21-1135-2024, 2024
Short summary
Short summary
Arctic marine ecosystems are highly susceptible to impacts of climate change and ocean acidification. We present pH and pCO2 time series (2016–2020) from the Chukchi Ecosystem Observatory and analyze the drivers of the current conditions to get a better understanding of how climate change and ocean acidification could affect the ecological niches of organisms.
William Hiles, Lucy C. Miller, Craig Smeaton, and William E. N. Austin
Biogeosciences, 21, 929–948, https://doi.org/10.5194/bg-21-929-2024, https://doi.org/10.5194/bg-21-929-2024, 2024
Short summary
Short summary
Saltmarsh soils may help to limit the rate of climate change by storing carbon. To understand their impacts, they must be accurately mapped. We use drone data to estimate the size of three saltmarshes in NE Scotland. We find that drone imagery, combined with tidal data, can reliably inform our understanding of saltmarsh size. When compared with previous work using vegetation communities, we find that our most reliable new estimates of stored carbon are 15–20 % smaller than previously estimated.
De'Marcus Robinson, Anh L. D. Pham, David J. Yousavich, Felix Janssen, Frank Wenzhöfer, Eleanor C. Arrington, Kelsey M. Gosselin, Marco Sandoval-Belmar, Matthew Mar, David L. Valentine, Daniele Bianchi, and Tina Treude
Biogeosciences, 21, 773–788, https://doi.org/10.5194/bg-21-773-2024, https://doi.org/10.5194/bg-21-773-2024, 2024
Short summary
Short summary
The present study suggests that high release of ferrous iron from the seafloor of the oxygen-deficient Santa Barabara Basin (California) supports surface primary productivity, creating positive feedback on seafloor iron release by enhancing low-oxygen conditions in the basin.
David J. Yousavich, De'Marcus Robinson, Xuefeng Peng, Sebastian J. E. Krause, Frank Wenzhöfer, Felix Janssen, Na Liu, Jonathan Tarn, Franklin Kinnaman, David L. Valentine, and Tina Treude
Biogeosciences, 21, 789–809, https://doi.org/10.5194/bg-21-789-2024, https://doi.org/10.5194/bg-21-789-2024, 2024
Short summary
Short summary
Declining oxygen (O2) concentrations in coastal oceans can threaten people’s ways of life and food supplies. Here, we investigate how mats of bacteria that proliferate on the seafloor of the Santa Barbara Basin sustain and potentially worsen these O2 depletion events through their unique chemoautotrophic metabolism. Our study shows how changes in seafloor microbiology and geochemistry brought on by declining O2 concentrations can help these mats grow as well as how that growth affects the basin.
Krysten Rutherford, Katja Fennel, Lina Garcia Suarez, and Jasmin G. John
Biogeosciences, 21, 301–314, https://doi.org/10.5194/bg-21-301-2024, https://doi.org/10.5194/bg-21-301-2024, 2024
Short summary
Short summary
We downscaled two mid-century (~2075) ocean model projections to a high-resolution regional ocean model of the northwest North Atlantic (NA) shelf. In one projection, the NA shelf break current practically disappears; in the other it remains almost unchanged. This leads to a wide range of possible future shelf properties. More accurate projections of coastal circulation features would narrow the range of possible outcomes of biogeochemical projections for shelf regions.
Lennart Thomas Bach
Biogeosciences, 21, 261–277, https://doi.org/10.5194/bg-21-261-2024, https://doi.org/10.5194/bg-21-261-2024, 2024
Short summary
Short summary
Ocean alkalinity enhancement (OAE) is a widely considered marine carbon dioxide removal method. OAE aims to accelerate chemical rock weathering, which is a natural process that slowly sequesters atmospheric carbon dioxide. This study shows that the addition of anthropogenic alkalinity via OAE can reduce the natural release of alkalinity and, therefore, reduce the efficiency of OAE for climate mitigation. However, the additionality problem could be mitigated via a variety of activities.
Tsuneo Ono, Daisuke Muraoka, Masahiro Hayashi, Makiko Yorifuji, Akihiro Dazai, Shigeyuki Omoto, Takehiro Tanaka, Tomohiro Okamura, Goh Onitsuka, Kenji Sudo, Masahiko Fujii, Ryuji Hamanoue, and Masahide Wakita
Biogeosciences, 21, 177–199, https://doi.org/10.5194/bg-21-177-2024, https://doi.org/10.5194/bg-21-177-2024, 2024
Short summary
Short summary
We carried out parallel year-round observations of pH and related parameters in five stations around the Japan coast. It was found that short-term acidified situations with Omega_ar less than 1.5 occurred at four of five stations. Most of such short-term acidified events were related to the short-term low salinity event, and the extent of short-term pH drawdown at high freshwater input was positively correlated with the nutrient concentration of the main rivers that flow into the coastal area.
K. Mareike Paul, Martijn Hermans, Sami A. Jokinen, Inda Brinkmann, Helena L. Filipsson, and Tom Jilbert
Biogeosciences, 20, 5003–5028, https://doi.org/10.5194/bg-20-5003-2023, https://doi.org/10.5194/bg-20-5003-2023, 2023
Short summary
Short summary
Seawater naturally contains trace metals such as Mo and U, which accumulate under low oxygen conditions on the seafloor. Previous studies have used sediment Mo and U contents as an archive of changing oxygen concentrations in coastal waters. Here we show that in fjords the use of Mo and U for this purpose may be impaired by additional processes. Our findings have implications for the reliable use of Mo and U to reconstruct oxygen changes in fjords.
Hannah Sharpe, Michel Gosselin, Catherine Lalande, Alexandre Normandeau, Jean-Carlos Montero-Serrano, Khouloud Baccara, Daniel Bourgault, Owen Sherwood, and Audrey Limoges
Biogeosciences, 20, 4981–5001, https://doi.org/10.5194/bg-20-4981-2023, https://doi.org/10.5194/bg-20-4981-2023, 2023
Short summary
Short summary
We studied the impact of submarine canyon processes within the Pointe-des-Monts system on biogenic matter export and phytoplankton assemblages. Using data from three oceanographic moorings, we show that the canyon experienced two low-amplitude sediment remobilization events in 2020–2021 that led to enhanced particle fluxes in the deep-water column layer > 2.6 km offshore. Sinking phytoplankton fluxes were lower near the canyon compared to background values from the lower St. Lawrence Estuary.
Dewi Langlet, Florian Mermillod-Blondin, Noémie Deldicq, Arthur Bauville, Gwendoline Duong, Lara Konecny, Mylène Hugoni, Lionel Denis, and Vincent M. P. Bouchet
Biogeosciences, 20, 4875–4891, https://doi.org/10.5194/bg-20-4875-2023, https://doi.org/10.5194/bg-20-4875-2023, 2023
Short summary
Short summary
Benthic foraminifera are single-cell marine organisms which can move in the sediment column. They were previously reported to horizontally and vertically transport sediment particles, yet the impact of their motion on the dissolved fluxes remains unknown. Using microprofiling, we show here that foraminiferal burrow formation increases the oxygen penetration depth in the sediment, leading to a change in the structure of the prokaryotic community.
Masahiko Fujii, Ryuji Hamanoue, Lawrence Patrick Cases Bernardo, Tsuneo Ono, Akihiro Dazai, Shigeyuki Oomoto, Masahide Wakita, and Takehiro Tanaka
Biogeosciences, 20, 4527–4549, https://doi.org/10.5194/bg-20-4527-2023, https://doi.org/10.5194/bg-20-4527-2023, 2023
Short summary
Short summary
This is the first study of the current and future impacts of climate change on Pacific oyster farming in Japan. Future coastal warming and acidification may affect oyster larvae as a result of longer exposure to lower-pH waters. A prolonged spawning period may harm oyster processing by shortening the shipping period and reducing oyster quality. To minimize impacts on Pacific oyster farming, in addition to mitigation measures, local adaptation measures may be required.
Cited articles
Aiken, J., Pradhan, Y., Barlow, R., Lavender, S., Poulton, A., Holligan, P., and Hardman-Mountford, N.: Phytoplankton pigments and functional types in the Atlantic Ocean: A decadal assessment, 1995–2005, Deep-Sea Res. Pt. II, 56, 899–917, https://doi.org/10.1016/j.dsr2.2008.09.017, 2009.
Albert, A., Echevin, V., Lévy, M., and Aumont, O.: Impact of nearshore wind stress curl on coastal circulation and primary productivity in the Peru upwelling system, J. Geophys. Res., 115, https://doi.org/10.1029/2010JC006569, 2010.
Allen, J. S.: Upwelling and Coastal Jets in a Continuously Stratified Ocean, J. Phys. Oceanogr., 3, 245–257, https://doi.org/10.1175/1520-0485(1973)003<0245:UACJIA>2.0.CO;2, 1973.
Arístegui, J., Barton, E. D., Tett, P., Montero, M. F., García-Muñoz, M., Basterretxea, G., Cussatlegras, A.-S., Ojeda, A., and de Armas, D.: Variability in plankton community structure, metabolism, and vertical carbon fluxes along an upwelling filament (Cape Juby, NW Africa), Prog. Oceanogr., 62, 95–113, https://doi.org/10.1016/j.pocean.2004.07.004, 2004.
Arístegui, J., Barton, E. D., Álvarez-Salgado, X. A., Santos, A. M. P., Figueiras, F. G., Kifani, S., Hernández-León, S., Mason, E., Machú, E., and Demarcq, H.: Sub-regional ecosystem variability in the Canary Current upwelling, Prog. Oceanogr., 83, 33–48, https://doi.org/10.1016/j.pocean.2009.07.031, 2009.
Auger, P. A., Machu, E., Gorgues, T., Grima, N., and Waeles, M.: Comparative study of potential transfer of natural and anthropogenic cadmium to plankton communities in the North-West African upwelling, Sci. Total Environ., 505, 870–888, https://doi.org/10.1016/j.scitotenv.2014.10.045, 2015.
Aumont, O. and Bopp, L.: Globalizing results from ocean in situ iron fertilization studies, Glob. Biogeochem. Cy., 20, GB2017, https://doi.org/10.1029/2005GB002591, 2006.
Aumont, O., Maier-Reimer, E., Blain, S., and Monfray, P.: An ecosystem model of the global ocean including Fe, Si, P colimitations, Glob. Biogeochem. Cy., 17, https://doi.org/10.1029/2001GB001745, 2003.
Aumont, O., Bopp, L., and Schulz, M.: What does temporal variability in aeolian dust deposition contribute to sea-surface iron and chlorophyll distributions?, Geophys. Res. Lett., 35, L07607, https://doi.org/10.1029/2007GL031131, 2008.
Bakun, A.: Global Climate Change and Intensification of Coastal Ocean Upwelling, Science, 247, 198–201, https://doi.org/10.2307/2873492, 1990.
Barton, E. D., Arıstegui, J., Tett, P., Cantón, M., Garcıa-Braun, J., Hernández-León, S., Nykjaer, L., Almeida, C., Almunia, J., and Ballesteros, S.: The transition zone of the Canary Current upwelling region, Prog. Oceanogr., 41, 455–504, https://doi.org/10.1016/S0079-6611(98)00023-8, 1998.
Barton, E. D., Arístegui, J., Tett, P., and Navarro-Pérez, E.: Variability in the Canary Islands area of filament-eddy exchanges, Prog. Oceanogr., 62, 71–94, https://doi.org/10.1016/j.pocean.2004.07.003, 2004.
Benazzouz, A., Pelegrí, J. L., Demarcq, H., Machín, F., Mason, E., Orbi, A., Peña-Izquierdo, J., and Soumia, M.: On the temporal memory of coastal upwelling off NW Africa, J. Geophys. Res.-Oceans, 119, 6356–6380, https://doi.org/10.1002/2013JC009559, 2014.
Benítez-Barrios, V. M., Pelegrí, J. L., Hernández-Guerra, A., Lwiza, K. M. M., Gomis, D., Vélez-Belchí, P., and Hernández-León, S.: Three-dimensional circulation in the NW Africa coastal transition zone, Prog. Oceanogr., 91, 516–533, https://doi.org/10.1016/j.pocean.2011.07.022, 2011.
Capet, X., Colas, F., McWilliams, J. C., Penven, P., and Marchesiello, P.: Eddies in eastern boundary subtropical upwelling systems, edited by: Hecht, M. W. and Hasumi, H., Geophys. Monogr. Ser., 177, 131–147, https://doi.org/10.1029/177GM10, 2008.
Carr, M. E.: Estimation of potential productivity in Eastern Boundary Currents using remote sensing, Deep-Sea Res. Pt. II, 49, 59–80, https://doi.org/10.1016/S0967-0645(01)00094-7, 2001.
Carr, M. E. and Kearns, E. J.: Production regimes in four Eastern Boundary Current systems, Deep-Sea Res. Pt. II, 50, 3199–3221, https://doi.org/10.1016/j.dsr2.2003.07.015, 2003.
Castelao, R. M. and Barth, J. A.: Upwelling around Cabo Frio, Brazil: The importance of wind stress curl, Geophys. Res. Lett., 33, https://doi.org/10.1029/2005GL025182, 2006.
Checkley, D. M. and Barth, J. A.: Patterns and processes in the California Current System, Prog. Oceanogr., 83, 49–64, https://doi.org/10.1016/j.pocean.2009.07.028, 2009.
Debreu, L., Marchesiello, P., Penven, P., and Cambon, G.: Two-way nesting in split-explicit ocean models: Algorithms, implementation and validation, Ocean Model., 49/50, 1–21, https://doi.org/10.1016/j.ocemod.2012.03.003, 2012.
de Boyer Montégut, C., Madec, G., Fischer, A. S., Lazar, A., and Iudicone, D.: Mixed layer depth over the global ocean: An examination of profile data and a profile-based climatology, J. Geophys. Res., 109, https://doi.org/10.1029/2004JC002378, 2004.
Dugdale, R. C., Wilkerson, F. P., and Morel, A.: Realization of new production in coastal upwelling areas: A means to compare relative performance, Limnol. Oceanogr., 35, 822–829, https://doi.org/10.4319/lo.1990.35.4.0822, 1990.
Echevin, V., Aumont, O., Ledesma, J., and Flores, G.: The seasonal cycle of surface chlorophyll in the Peruvian upwelling system: A modelling study, Prog. Oceanogr., 79, 167–176, https://doi.org/10.1016/j.pocean.2008.10.026, 2008.
Enriquez, A. G. and Friehe, C. A.: Effects of Wind Stress and Wind Stress Curl Variability on Coastal Upwelling, J. Phys. Oceanogr., 25, 1651–1671, https://doi.org/10.1175/1520-0485(1995)025<1651:EOWSAW>2.0.CO;2, 1995.
Garcia, H. E., Locarnini, R. A., Boyer, T. P., Antonov, J. I., Baranova, O. K., Zweng, M. M., Reagan, J. R., and Johnson, D. R.: World Ocean Atlas 2013, Volume 4: Dissolved Inorganic Nutrients (phosphate, nitrate, silicate), edited by: Levitus, S., A. Mishonov Technical Ed.; NOAA Atlas NESDIS 76, 25 pp., 2014.
García-Muñoz, M., Arístegui, J., Montero, M. F., and Barton, E. D.: Distribution and transport of organic matter along a filament-eddy system in the Canaries – NW Africa coastal transition zone region, Prog. Oceanogr., 62, 115–129, https://doi.org/10.1016/j.pocean.2004.07.005, 2004.
García-Muñoz, M., Arístegui, J., Pelegrí, J. L., Antoranz, A., Ojeda, A., and Torres, M.: Exchange of carbon by an upwelling filament off Cape Ghir (NW Africa), J. Mar. Syst., 54, 83–95, https://doi.org/10.1016/j.jmarsys.2004.07.005, 2005.
Gibb, S. W., Barlow, R. G., Cummings, D. G., Rees, N. W., Trees, C. C., Holligan, P., and Suggett, D.: Surface phytoplankton pigment distributions in the Atlantic Ocean: an assessment of basin scale variability between 50° N and 50° S, Prog. Oceanogr., 45, 339–368, https://doi.org/10.1016/S0079-6611(00)00007-0, 2000.
Gorgues, T., Menkes, C., Aumont, O., Vialard, J., Dandonneau, Y., and Bopp, L.: Biogeochemical impact of tropical instability waves in the equatorial Pacific, Geophys. Res. Lett., 32, https://doi.org/10.1029/2005GL024110, 2005.
Gorgues, T., Aumont, O., and Rodgers, K. B.: A mechanistic account of increasing seasonal variations in the rate of ocean uptake of anthropogenic carbon, Biogeosciences, 7, 2581–2589, https://doi.org/10.5194/bg-7-2581-2010, 2010.
Gregg, W. W. and Casey, N. W.: Global and regional evaluation of the SeaWiFS chlorophyll data set, Remote Sens. Environ., 93, 463–479, https://doi.org/10.1016/j.rse.2003.12.012, 2004.
Gregg, W. W., Conkright, M. E., Ginoux, P., O'Reilly, J. E., and Casey, N. W.: Ocean primary production and climate: Global decadal changes, Geophys. Res. Lett., 30, https://doi.org/10.1029/2003GL016889, 2003.
Gruber, N., Lachkar, Z., Frenzel, H., Marchesiello, P., Münnich, M., McWilliams, J. C., Nagai, T., and Plattner, G.-K.: Eddy-induced reduction of biological production in eastern boundary upwelling systems, Nat. Geosci., 4, 787–792, https://doi.org/10.1038/ngeo1273, 2011.
Gutiérrez-Rodríguez, A., Latasa, M., Agustí, S., and Duarte, C. M.: Distribution and contribution of major phytoplankton groups to carbon cycling across contrasting conditions of the subtropical northeast Atlantic Ocean, Deep-Sea Res., 58, 1115–1129, https://doi.org/10.1016/j.dsr.2011.08.003, 2011.
Hardman-Mountford, N. J., Richardson, A. J., Agenbag, J. J., Hagen, E., Nykjaer, L., Shillington, F. A., and Villacastin, C.: Ocean climate of the South East Atlantic observed from satellite data and wind models, Prog. Oceanogr., 59, 181–221, https://doi.org/10.1016/j.pocean.2003.10.001, 2003.
Helmke, P., Romero, O., and Fischer, G.: Northwest African upwelling and its effect on offshore organic carbon export to the deep sea, Glob. Biogeochem. Cy., 19, https://doi.org/10.1029/2004GB002265, 2005.
Huntsman, S. A. and Barber, R. T.: Primary production off northwest Africa: the relationship to wind and nutrient conditions, Deep-Sea Res., 24, 25–33, https://doi.org/10.1016/0146-6291(77)90538-0, 1977.
José, Y. S., Aumont, O., Machu, E., Penven, P., Moloney, C. L., and Maury, O.: Influence of mesoscale eddies on biological production in the Mozambique Channel: Several contrasted examples from a coupled ocean-biogeochemistry model, Deep-Sea Res. Pt. II, 100, 79–93, https://doi.org/10.1016/j.dsr2.2013.10.018, 2014.
Karakaş, G., Nowald, N., Blaas, M., Marchesiello, P., Frickenhaus, S., and Schlitzer, R.: High-resolution modeling of sediment erosion and particle transport across the northwest African shelf, J. Geophys. Res., 111,Deep Sea https://doi.org/10.1029/2005JC003296, 2006.
Kostianoy, A. G. and Zatsepin, A. G.: The West African coastal upwelling filaments and cross-frontal water exchange conditioned by them, J. Mar. Syst., 7, 349–359, https://doi.org/10.1016/0924-7963(95)00029-1, 1996.
Lachkar, Z. and Gruber, N.: What controls biological production in coastal upwelling systems? Insights from a comparative modeling study, Biogeosciences, 8, 2961–2976, https://doi.org/10.5194/bg-8-2961-2011, 2011.
Lathuilière, C., Echevin, V., and Lévy, M.: Seasonal and intraseasonal surface chlorophyll-a variability along the northwest African coast, J. Geophys. Res., 113, https://doi.org/10.1029/2007JC004433, 2008.
Lázaro, C., Joana Fernandes, M., Santos, A. M. P., and Oliveira, P.: Seasonal and interannual variability of surface circulation in the Cape Verde region from 8 years of merged T∕P and ERS-2 altimeter data, Remote Sens. Environ., 98, 45–62, https://doi.org/10.1016/j.rse.2005.06.005, 2005.
Lumpkin, R. and Johnson, G. C.: Global ocean surface velocities from drifters: Mean, variance, El Niño-Southern Oscillation response, and seasonal cycle: Global Ocean Surface Velocities, J. Geophys. Res.-Oceans, 118, 2992–3006, https://doi.org/10.1002/jgrc.20210, 2013.
Machu, E., Ettahiri, O., Kifani, S., Benazzouz, A., Makaoui, A., and Demarcq, H.: Environmental control of the recruitment of sardines (Sardina pilchardus) over the western Saharan shelf between 1995 and 2002: a coupled physical/biogeochemical modelling experiment, Fish. Oceanogr., 18, 287–300, https://doi.org/10.1111/j.1365-2419.2009.00511.x, 2009.
Marañon, E., Holligan, P. M., Varela, M., Mouriño, B., and Bale, A. J.: Basin-scale variability of phytoplankton biomass, production and growth in the Atlantic Ocean, Deep-Sea Res. Part Oceanogr. Res. Pap., 47, 825–857, https://doi.org/10.1016/S0967-0637(99)00087-4, 2000.
Marchesiello, P. and Estrade, P.: Eddy activity and mixing in upwelling systems: a comparative study of Northwest Africa and California regions, Int. J. Earth Sci., 98, 299–308, https://doi.org/10.1007/s00531-007-0235-6, 2009.
Marchesiello, P. and Estrade, P.: Upwelling limitation by onshore geostrophic flow, J. Mar. Res., 68, 37–62, https://doi.org/10.1357/002224010793079004, 2010.
Mason, E., Colas, F., and Pelegrí, J. L.: A Lagrangian study tracing water parcel origins in the Canary Upwelling System, Sci. Mar., 76, 79–94, https://doi.org/10.3989/scimar.03608.18D, 2012.
Messié, M. and Chavez, F. P.: Seasonal regulation of primary production in eastern boundary upwelling systems, Prog. Oceanogr., 134, 1–18, https://doi.org/10.1016/j.pocean.2014.10.011, 2014.
Messié, M., Ledesma, M., Kolber, D. D., Michisaki, R. P., Foley, D. G., and Chavez, F. P.: Potential new production estimates in four eastern boundary upwelling ecosystems, Prog. Oceanogr., 8, 151–158, https://doi.org/10.1016/j.pocean.2009.07.018, 2009.
Mittelstaedt, E.: The upwelling area off Northwest Africa – a description of phenomena related to coastal upwelling, Prog. Oceanogr., 12, 307–331, https://doi.org/10.1016/0079-6611(83)90012-5, 1983.
Mittelstaedt, E.: The ocean boundary along the northwest African coast: Circulation and oceanographic properties at the sea surface, Prog. Oceanogr., 26, 307–355, https://doi.org/10.1016/0079-6611(91)90011-A, 1991.
Moulin, C., Gordon, H. R., Chomko, R. M., Banzon, V. F., and Evans, R. H.: Atmospheric correction of ocean color imagery through thick layers of Saharan dust, Geophys. Res. Lett., 28, 5–8, https://doi.org/10.1029/2000GL011803, 2001.
Muller-Karger, F. E., Varela, R., Thunell, R., Luerssen, R., Hu, C., and Walsh, J. J.: The importance of continental margins in the global carbon cycle, Geophys. Res. Lett., 32, https://doi.org/10.1029/2004GL021346, 2005.
Ohde, T. and Siegel, H.: Biological response to coastal upwelling and dust deposition in the area off Northwest Africa, Cont. Shelf Res., 30, 1108–1119, https://doi.org/10.1016/j.csr.2010.02.016, 2010.
Pradhan, Y., Lavender, S. J., Hardman-Mountford, N. J., and Aiken, J.: Seasonal and inter-annual variability of chlorophyll-a concentration in the Mauritanian upwelling: Observation of an anomalous event during 1998–1999, Deep-Sea Res. Pt. II, 53, 1548–1559, https://doi.org/10.1016/j.dsr2.2006.05.016, 2006.
Saha, S., Moorthi, S., Pan, H.-L., Wu, X., Wang, J., Nadiga, S., Tripp, P., Kistler, R., Woollen, J., and Behringer, D.: The NCEP climate forecast system reanalysis., Bull. Am. Meteorol. Soc., 91, 1015, https://doi.org/10.1175/2010BAMS3001.1, 2010.
Shchepetkin, A. F. and McWilliams, J. C.: The regional oceanic modeling system (ROMS): a split-explicit, free-surface, topography-following-coordinate oceanic model, Ocean Model., 9, 347–404, https://doi.org/10.1016/j.ocemod.2004.08.002, 2005.
Stramma, L., Hüttl, S., and Schafstall, J.: Water masses and currents in the upper tropical northeast Atlantic off northwest Africa, J. Geophys. Res., 110, https://doi.org/10.1029/2005JC002939, 2005.
Sunda, W. G. and Huntsman, S. A.: Interrelated influence of iron, light and cell size on marine phytoplankton growth, Nature, 390, 389–392, https://doi.org/10.1038/37093, 1997.
Thomas, A. C., Carr, M. E., and Strub, P. T.: Chlorophyll variability in eastern boundary currents, Geophys. Res. Lett., 28, 3421–3424, https://doi.org/10.1029/2001GL013368, 2001.
Verstraete, J. M.: Contre-courants équatoriaux et variations saisonnières du contenu thermique et du niveau moyen dans l'Atlantique tropical Est, Oceanol. Acta, 8, 249–261, 1985.
Wooster, W. S., Bakun, A. M. D. R., and McLain, D. R.: Seasonal upwelling cycle along eastern boundary of North-Atlantic, J. Mar. Res., 34, 131–141, 1976.
Zimmerman, R. C., Kremer, J. N., and Dugdale, R. C.: Acceleration of nutrient uptake by phytoplankton in a coastal upwelling ecosystem: A modeling analysis, Limnol. Oceanogr., 32, 359–367, https://doi.org/10.4319/lo.1987.32.2.0359, 1987.
Short summary
A box modeling approach reveals that horizontal currents drive the spatial distribution of phytoplankton biomass and primary production in the north-west African upwelling system. Alongshore (cross-shore) currents limit (enhance) cross-shore exchanges north (south) of Cape Blanc. Off Cape Blanc, a meridional convergence makes ambiguous the response of coastal nutrient upwelling to wind forcings, and high production is based upon nutrients and remineralized matter injected by horizontal currents.
A box modeling approach reveals that horizontal currents drive the spatial distribution of...
Altmetrics
Final-revised paper
Preprint