Articles | Volume 17, issue 4
https://doi.org/10.5194/bg-17-1181-2020
© Author(s) 2020. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/bg-17-1181-2020
© Author(s) 2020. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Research article
| 
28 Feb 2020
Research article |
| 28 Feb 2020
| 28 Feb 2020
Maize root and shoot litter quality controls short-term CO2 and N2O emissions and bacterial community structure of arable soil
Pauline Sophie Rummel
CORRESPONDING AUTHOR
Division of Plant Nutrition and Crop Physiology, Department of Crop
Science, University of Göttingen, Göttingen, Germany
Birgit Pfeiffer
Division of Plant Nutrition and Crop Physiology, Department of Crop
Science, University of Göttingen, Göttingen, Germany
Institute of Microbiology and Genetics, Department of Genomic and Applied
Microbiology, University of Göttingen, Göttingen, Germany
Johanna Pausch
Agroecology, Faculty for Biology, Chemistry, and Earth Sciences,
University of Bayreuth, Bayreuth, Germany
Reinhard Well
Thünen Institute, Climate-Smart Agriculture, Braunschweig, Germany
Dominik Schneider
Institute of Microbiology and Genetics, Department of Genomic and Applied
Microbiology, University of Göttingen, Göttingen, Germany
Klaus Dittert
Division of Plant Nutrition and Crop Physiology, Department of Crop
Science, University of Göttingen, Göttingen, Germany
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Balázs Grosz, Reinhard Well, Rene Dechow, Jan Reent Köster, Mohammad Ibrahim Khalil, Simone Merl, Andreas Rode, Bianca Ziehmer, Amanda Matson, and Hongxing He
Biogeosciences, 18, 5681–5697, https://doi.org/10.5194/bg-18-5681-2021, https://doi.org/10.5194/bg-18-5681-2021, 2021
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To assure quality predictions biogeochemical models must be current. We use data measured using novel incubation methods to test the denitrification sub-modules of three models. We aim to identify limitations in the denitrification modeling to inform next steps for development. Several areas are identified, most urgently improved denitrification control parameters and further testing with high-temporal-resolution datasets. Addressing these would significantly improve denitrification modeling.
Lena Rohe, Traute-Heidi Anderson, Heinz Flessa, Anette Goeske, Dominika Lewicka-Szczebak, Nicole Wrage-Mönnig, and Reinhard Well
Biogeosciences, 18, 4629–4650, https://doi.org/10.5194/bg-18-4629-2021, https://doi.org/10.5194/bg-18-4629-2021, 2021
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This is the first experimental setup combining a complex set of methods (microbial inhibitors and isotopic approaches) to differentiate between N2O produced by fungi or bacteria during denitrification in three soils. Quantifying the fungal fraction with inhibitors was not successful due to large amounts of uninhibited N2O production. All successful methods suggested a small or missing fungal contribution. Artefacts occurring with microbial inhibition to determine N2O fluxes are discussed.
Lena Rohe, Bernd Apelt, Hans-Jörg Vogel, Reinhard Well, Gi-Mick Wu, and Steffen Schlüter
Biogeosciences, 18, 1185–1201, https://doi.org/10.5194/bg-18-1185-2021, https://doi.org/10.5194/bg-18-1185-2021, 2021
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Total denitrification, i.e. N2O and (N2O + N2) fluxes, of repacked soil cores were analysed for different combinations of soils and water contents. Prediction accuracy of (N2O + N2) fluxes was highest with combined proxies for oxygen demand (CO2 flux) and oxygen supply (anaerobic soil volume fraction). Knowledge of denitrification completeness (product ratio) improved N2O predictions. Substitutions with cheaper proxies (soil organic matter, empirical diffusivity) reduced prediction accuracy.
Dominika Lewicka-Szczebak, Maciej Piotr Lewicki, and Reinhard Well
Biogeosciences, 17, 5513–5537, https://doi.org/10.5194/bg-17-5513-2020, https://doi.org/10.5194/bg-17-5513-2020, 2020
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We present the first validation of N2O isotopic approaches for estimating N2O source pathways and N2O reduction. These approaches are widely used for tracing soil nitrogen cycling, but the results of these estimations are very uncertain. Here we report the results from parallel treatments allowing for precise validation of these approaches, and we propose the best strategies for results interpretation, including the new idea of an isotope model integrating three isotopic signatures of N2O.
Dario Fussmann, Avril Jean Elisabeth von Hoyningen-Huene, Andreas Reimer, Dominik Schneider, Hana Babková, Robert Peticzka, Andreas Maier, Gernot Arp, Rolf Daniel, and Patrick Meister
Biogeosciences, 17, 2085–2106, https://doi.org/10.5194/bg-17-2085-2020, https://doi.org/10.5194/bg-17-2085-2020, 2020
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Dolomite (CaMg(CO3)2) is supersaturated in many aquatic settings (e.g., seawater) on modern Earth but does not precipitate directly from the fluid, a fact known as the dolomite problem. The widely acknowledged concept of dolomite precipitation involves microbial extracellular polymeric substances (EPSs) and anoxic conditions as important drivers. In contrast, results from Lake Neusiedl support an alternative concept of Ca–Mg carbonate precipitation under aerobic and alkaline conditions.
Dominika Lewicka-Szczebak and Reinhard Well
SOIL, 6, 145–152, https://doi.org/10.5194/soil-6-145-2020, https://doi.org/10.5194/soil-6-145-2020, 2020
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This study aimed at comparison of various experimental strategies for incubating soil samples to determine the N2 flux. Such experiments require addition of isotope tracer, i.e. nitrogen fertilizer enriched in heavy nitrogen isotopes (15N). Here we compared the impact of soil homogenization and mixing with the tracer and tracer injection to the intact soil cores. The results are well comparable: both techniques would provide similar conclusions on the magnitude of N2 flux.
Reinhard Well, Martin Maier, Dominika Lewicka-Szczebak, Jan-Reent Köster, and Nicolas Ruoss
Biogeosciences, 16, 2233–2246, https://doi.org/10.5194/bg-16-2233-2019, https://doi.org/10.5194/bg-16-2233-2019, 2019
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Denitrification is a key process in the soil nitrogen cycle but poorly investigated due to methodical limitations. The 15N gas flux method is currently the only approach allowing field measurement of denitrification but was subject to bias due to unaccounted fluxes of 15N-labelled gaseous denitrification products to the subsoil. We used field flux experiments and diffusion–reaction modelling to estimate this source of error and developed an approach to correct denitrification rates.
Blanca Rincón-Tomás, Jan-Peter Duda, Luis Somoza, Francisco Javier González, Dominik Schneider, Teresa Medialdea, Esther Santofimia, Enrique López-Pamo, Pedro Madureira, Michael Hoppert, and Joachim Reitner
Biogeosciences, 16, 1607–1627, https://doi.org/10.5194/bg-16-1607-2019, https://doi.org/10.5194/bg-16-1607-2019, 2019
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Cold-water corals were found at active sites in Pompeia Province (Gulf of Cádiz). Since seeped fluids are harmful for the corals, we approached the environmental conditions that allow corals to colonize carbonates while seepage occurs. As a result, we propose that chemosynthetic microorganisms (i.e. sulfide-oxidizing bacteria and AOM-related microorganisms) play an important role in the colonization of the corals at these sites by feeding on the seeped fluids and avoiding coral damage.
Laura Maritza Cardenas, Roland Bol, Dominika Lewicka-Szczebak, Andrew Stuart Gregory, Graham Peter Matthews, William Richard Whalley, Thomas Henry Misselbrook, David Scholefield, and Reinhard Well
Biogeosciences, 14, 4691–4710, https://doi.org/10.5194/bg-14-4691-2017, https://doi.org/10.5194/bg-14-4691-2017, 2017
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A laboratory incubation was carried out at different soil moisture levels to measure emissions of nitrogen gases and the isotopomers (position of 15N) of nitrous oxide. Flux variability was larger in drier conditions, probably due to nutrient distribution heterogeneity created from soil cracks and consequently nutrient hot spots. Denitrification was the main source of fluxes at higher moisture, but nitrification could have occurred under drier conditions (although moisture was still high).
Dominika Lewicka-Szczebak, Jürgen Augustin, Anette Giesemann, and Reinhard Well
Biogeosciences, 14, 711–732, https://doi.org/10.5194/bg-14-711-2017, https://doi.org/10.5194/bg-14-711-2017, 2017
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The consumption of the greenhouse gas nitrous oxide (N2O) by its reduction to dinitrogen via microbial denitrification in soil is poorly quantified. This precludes improvements in nitrogen (N) efficiency in agricultural ecosystems and mitigation of N losses to the environment including N2O fluxes. We present a laboratory evaluation for the determination of N2O reduction based on stable isotope values of soil-emitted N2O as a new approach to determine N2O reduction in the field studies.
Dominika Lewicka-Szczebak, Jens Dyckmans, Jan Kaiser, Alina Marca, Jürgen Augustin, and Reinhard Well
Biogeosciences, 13, 1129–1144, https://doi.org/10.5194/bg-13-1129-2016, https://doi.org/10.5194/bg-13-1129-2016, 2016
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Oxygen isotopic signatures of N2O are formed in complex multistep enzymatic reactions and depend on isotopic fractionation during enzymatic reduction of nitrate to N2O and on the oxygen isotope exchange with soil water. We propose a new method for quantification of oxygen isotope exchange, with simultaneous determination of oxygen isotopic signatures, to decipher the mechanism of oxygen isotopic fractionation. We indicate the differences between fractionation mechanisms by various pathways.
W. Eschenbach, R. Well, and W. Walther
Biogeosciences, 12, 2327–2346, https://doi.org/10.5194/bg-12-2327-2015, https://doi.org/10.5194/bg-12-2327-2015, 2015
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Diel and seasonal methane dynamics in the shallow and turbulent Wadden Sea
Technical note: Skirt chamber – an open dynamic method for the rapid and minimally intrusive measurement of greenhouse gas emissions from peatlands
Seasonal variability of nitrous oxide concentrations and emissions in a temperate estuary
Reviews and syntheses: Recent advances in microwave remote sensing in support of terrestrial carbon cycle science in Arctic–boreal regions
Simulated methane emissions from Arctic ponds are highly sensitive to warming
Water-table-driven greenhouse gas emission estimates guide peatland restoration at national scale
Relationships between greenhouse gas production and landscape position during short-term permafrost thaw under anaerobic conditions in the Lena Delta
Carbon emissions and radiative forcings from tundra wildfires in the Yukon–Kuskokwim River Delta, Alaska
Carbon monoxide (CO) cycling in the Fram Strait, Arctic Ocean
Post-flooding disturbance recovery promotes carbon capture in riparian zones
Enhanced Southern Ocean CO2 outgassing as a result of stronger and poleward shifted southern hemispheric westerlies
Capabilities of optical and radar Earth observation data for up-scaling methane emissions linked to subsidence and permafrost degradation in sub-Arctic peatlands
Meteorological responses of carbon dioxide and methane fluxes in the terrestrial and aquatic ecosystems of a subarctic landscape
Spatial and temporal variability of methane emissions and environmental conditions in a hyper-eutrophic fishpond
Carbon emission and export from the Ket River, western Siberia
Evaluation of wetland CH4 in the Joint UK Land Environment Simulator (JULES) land surface model using satellite observations
Greenhouse gas fluxes in mangrove forest soil in an Amazon estuary
Temporal patterns and drivers of CO2 emission from dry sediments in a groyne field of a large river
Effects of water table level and nitrogen deposition on methane and nitrous oxide emissions in an alpine peatland
Highest methane concentrations in an Arctic river linked to local terrestrial inputs
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Trace gas fluxes from tidal salt marsh soils: implications for carbon–sulfur biogeochemistry
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Intercomparison of methods to estimate gross primary production based on CO2 and COS flux measurements
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The effect of static chamber base on N2O flux in drip irrigation
Controls on autotrophic and heterotrophic respiration in an ombrotrophic bog
Episodic N2O emissions following tillage of a legume–grass cover crop mixture
Variation in CO2 and CH4 fluxes among land cover types in heterogeneous Arctic tundra in northeastern Siberia
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Sources of nitrous oxide and the fate of mineral nitrogen in subarctic permafrost peat soils
Data-based estimates of interannual sea–air CO2 flux variations 1957–2020 and their relation to environmental drivers
Evaluating alternative ebullition models for predicting peatland methane emission and its pathways via data–model fusion
Excess soil moisture and fresh carbon input are prerequisites for methane production in podzolic soil
Low biodegradability of particulate organic carbon mobilized from thaw slumps on the Peel Plateau, NT, and possible chemosynthesis and sorption effects
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Ideas and perspectives: Enhancing research and monitoring of carbon pools and land-to-atmosphere greenhouse gases exchange in developing countries
Ignoring carbon emissions from thermokarst ponds results in overestimation of tundra net carbon uptake
Quantification of potential methane emissions associated with organic matter amendments following oxic-soil inundation
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Partitioning carbon sources between wetland and well-drained ecosystems to a tropical first-order stream – implications for carbon cycling at the watershed scale (Nyong, Cameroon)
Extreme events driving year-to-year differences in gross primary productivity across the US
Methane gas emissions from savanna fires: what analysis of local burning regimes in a working West African landscape tell us
Methane in Zackenberg Valley, NE Greenland: multidecadal growing season fluxes of a high-Arctic tundra
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Cole G. Brachmann, Tage Vowles, Riikka Rinnan, Mats P. Björkman, Anna Ekberg, and Robert G. Björk
Biogeosciences, 20, 4069–4086, https://doi.org/10.5194/bg-20-4069-2023, https://doi.org/10.5194/bg-20-4069-2023, 2023
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Herbivores change plant communities through grazing, altering the amount of CO2 and plant-specific chemicals (termed VOCs) emitted. We tested this effect by excluding herbivores and studying the CO2 and VOC emissions. Herbivores reduced CO2 emissions from a meadow community and altered VOC composition; however, community type had the strongest effect on the amount of CO2 and VOCs released. Herbivores can mediate greenhouse gas emissions, but the effect is marginal and community dependent.
Ole Lessmann, Jorge Encinas Fernández, Karla Martínez-Cruz, and Frank Peeters
Biogeosciences, 20, 4057–4068, https://doi.org/10.5194/bg-20-4057-2023, https://doi.org/10.5194/bg-20-4057-2023, 2023
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Based on a large dataset of seasonally resolved methane (CH4) pore water concentrations in a reservoir's sediment, we assess the significance of CH4 emissions due to reservoir flushing. In the studied reservoir, CH4 emissions caused by one flushing operation can represent 7 %–14 % of the annual CH4 emissions and depend on the timing of the flushing operation. In reservoirs with high sediment loadings, regular flushing may substantially contribute to the overall CH4 emissions.
Matti Räsänen, Risto Vesala, Petri Rönnholm, Laura Arppe, Petra Manninen, Markus Jylhä, Jouko Rikkinen, Petri Pellikka, and Janne Rinne
Biogeosciences, 20, 4029–4042, https://doi.org/10.5194/bg-20-4029-2023, https://doi.org/10.5194/bg-20-4029-2023, 2023
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Fungus-growing termites recycle large parts of dead plant material in African savannas and are significant sources of greenhouse gases. We measured CO2 and CH4 fluxes from their mounds and surrounding soils in open and closed habitats. The fluxes scale with mound volume. The results show that emissions from mounds of fungus-growing termites are more stable than those from other termites. The soil fluxes around the mound are affected by the termite colonies at up to 2 m distance from the mound.
Tim René de Groot, Anne Margriet Mol, Katherine Mesdag, Pierre Ramond, Rachel Ndhlovu, Julia Catherine Engelmann, Thomas Röckmann, and Helge Niemann
Biogeosciences, 20, 3857–3872, https://doi.org/10.5194/bg-20-3857-2023, https://doi.org/10.5194/bg-20-3857-2023, 2023
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This study investigates methane dynamics in the Wadden Sea. Our measurements revealed distinct variations triggered by seasonality and tidal forcing. The methane budget was higher in warmer seasons but surprisingly high in colder seasons. Methane dynamics were amplified during low tides, flushing the majority of methane into the North Sea or releasing it to the atmosphere. Methanotrophic activity was also elevated during low tide but mitigated only a small fraction of the methane efflux.
Frederic Thalasso, Brenda Riquelme, Andrés Gómez, Roy Mackenzie, Francisco Javier Aguirre, Jorge Hoyos-Santillan, Ricardo Rozzi, and Armando Sepulveda-Jauregui
Biogeosciences, 20, 3737–3749, https://doi.org/10.5194/bg-20-3737-2023, https://doi.org/10.5194/bg-20-3737-2023, 2023
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A robust skirt-chamber design to capture and quantify greenhouse gas emissions from peatlands is presented. Compared to standard methods, this design improves the spatial resolution of field studies in remote locations while minimizing intrusion.
Gesa Schulz, Tina Sanders, Yoana G. Voynova, Hermann W. Bange, and Kirstin Dähnke
Biogeosciences, 20, 3229–3247, https://doi.org/10.5194/bg-20-3229-2023, https://doi.org/10.5194/bg-20-3229-2023, 2023
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Nitrous oxide (N2O) is an important greenhouse gas. However, N2O emissions from estuaries underlie significant uncertainties due to limited data availability and high spatiotemporal variability. We found the Elbe Estuary (Germany) to be a year-round source of N2O, with the highest emissions in winter along with high nitrogen loads. However, in spring and summer, N2O emissions did not decrease alongside lower nitrogen loads because organic matter fueled in situ N2O production along the estuary.
Alex Mavrovic, Oliver Sonnentag, Juha Lemmetyinen, Jennifer L. Baltzer, Christophe Kinnard, and Alexandre Roy
Biogeosciences, 20, 2941–2970, https://doi.org/10.5194/bg-20-2941-2023, https://doi.org/10.5194/bg-20-2941-2023, 2023
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This review supports the integration of microwave spaceborne information into carbon cycle science for Arctic–boreal regions. The microwave data record spans multiple decades with frequent global observations of soil moisture and temperature, surface freeze–thaw cycles, vegetation water storage, snowpack properties, and land cover. This record holds substantial unexploited potential to better understand carbon cycle processes.
Zoé Rehder, Thomas Kleinen, Lars Kutzbach, Victor Stepanenko, Moritz Langer, and Victor Brovkin
Biogeosciences, 20, 2837–2855, https://doi.org/10.5194/bg-20-2837-2023, https://doi.org/10.5194/bg-20-2837-2023, 2023
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We use a new model to investigate how methane emissions from Arctic ponds change with warming. We find that emissions increase substantially. Under annual temperatures 5 °C above present temperatures, pond methane emissions are more than 3 times higher than now. Most of this increase is caused by an increase in plant productivity as plants provide the substrate microbes used to produce methane. We conclude that vegetation changes need to be included in predictions of pond methane emissions.
Julian Koch, Lars Elsgaard, Mogens H. Greve, Steen Gyldenkærne, Cecilie Hermansen, Gregor Levin, Shubiao Wu, and Simon Stisen
Biogeosciences, 20, 2387–2403, https://doi.org/10.5194/bg-20-2387-2023, https://doi.org/10.5194/bg-20-2387-2023, 2023
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Utilizing peatlands for agriculture leads to large emissions of greenhouse gases worldwide. The emissions are triggered by lowering the water table, which is a necessary step in order to make peatlands arable. Many countries aim at reducing their emissions by restoring peatlands, which can be achieved by stopping agricultural activities and thereby raising the water table. We estimate a total emission of 2.6 Mt CO2-eq for organic-rich peatlands in Denmark and a potential reduction of 77 %.
Mélissa Laurent, Matthias Fuchs, Tanja Herbst, Alexandra Runge, Susanne Liebner, and Claire C. Treat
Biogeosciences, 20, 2049–2064, https://doi.org/10.5194/bg-20-2049-2023, https://doi.org/10.5194/bg-20-2049-2023, 2023
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In this study we investigated the effect of different parameters (temperature, landscape position) on the production of greenhouse gases during a 1-year permafrost thaw experiment. For very similar carbon and nitrogen contents, our results show a strong heterogeneity in CH4 production, as well as in microbial abundance. According to our study, these differences are mainly due to the landscape position and the hydrological conditions established as a result of the topography.
Michael Moubarak, Seeta Sistla, Stefano Potter, Susan M. Natali, and Brendan M. Rogers
Biogeosciences, 20, 1537–1557, https://doi.org/10.5194/bg-20-1537-2023, https://doi.org/10.5194/bg-20-1537-2023, 2023
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Tundra wildfires are increasing in frequency and severity with climate change. We show using a combination of field measurements and computational modeling that tundra wildfires result in a positive feedback to climate change by emitting significant amounts of long-lived greenhouse gasses. With these effects, attention to tundra fires is necessary for mitigating climate change.
Hanna I. Campen, Damian L. Arévalo-Martínez, and Hermann W. Bange
Biogeosciences, 20, 1371–1379, https://doi.org/10.5194/bg-20-1371-2023, https://doi.org/10.5194/bg-20-1371-2023, 2023
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Carbon monoxide (CO) is a climate-relevant trace gas emitted from the ocean. However, oceanic CO cycling is understudied. Results from incubation experiments conducted in the Fram Strait (Arctic Ocean) indicated that (i) pH did not affect CO cycling and (ii) enhanced CO production and consumption were positively correlated with coloured dissolved organic matter and nitrate concentrations. This suggests microbial CO uptake to be the driving factor for CO cycling in the Arctic Ocean.
Yihong Zhu, Ruihua Liu, Huai Zhang, Shaoda Liu, Zhengfeng Zhang, Fei-Hai Yu, and Timothy G. Gregoire
Biogeosciences, 20, 1357–1370, https://doi.org/10.5194/bg-20-1357-2023, https://doi.org/10.5194/bg-20-1357-2023, 2023
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With global warming, the risk of flooding is rising, but the response of the carbon cycle of aquatic and associated riparian systems
to flooding is still unclear. Based on the data collected in the Lijiang, we found that flooding would lead to significant carbon emissions of fluvial areas and riparian areas during flooding, but carbon capture may happen after flooding. In the riparian areas, the surviving vegetation, especially clonal plants, played a vital role in this transformation.
Laurie C. Menviel, Paul Spence, Andrew E. Kiss, Matthew A. Chamberlain, Hakase Hayashida, Matthew H. England, and Darryn Waugh
EGUsphere, https://doi.org/10.5194/egusphere-2023-390, https://doi.org/10.5194/egusphere-2023-390, 2023
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As the ocean absorbs 25 % of the anthropogenic emissions of carbon, it is important to understand the impact of climate change on the flux of carbon between the ocean and the atmosphere. Here, we use a very high-resolution ocean, sea-ice, carbon cycle model to show that the capability of the Southern Ocean to uptake CO2 has decreased over the last 50 years due to a strengthening and poleward shift of the southern hemispheric westerlies. This trend is expected to continue over the coming century.
Sofie Sjogersten, Martha Ledger, Matthias Siewert, Betsabé de la Barreda-Bautista, Andrew Sowter, David Gee, Giles Foody, and Doreen S. Boyd
Biogeosciences Discuss., https://doi.org/10.5194/bg-2023-17, https://doi.org/10.5194/bg-2023-17, 2023
Revised manuscript accepted for BG
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Permafrost thaw in Arctic regions is increasing methane emissions but quantification is difficult given the large and remote areas impacted. We show that drone data together with satellite data can be used to extrapolate emissions across the wider landscape as well as detecting areas at risk of higher emissions. A transition of currently degrading areas to fen type vegetation can increase emission with several orders of magnitude highlighting the importance of quantifying areas at risk.
Lauri Heiskanen, Juha-Pekka Tuovinen, Henriikka Vekuri, Aleksi Räsänen, Tarmo Virtanen, Sari Juutinen, Annalea Lohila, Juha Mikola, and Mika Aurela
Biogeosciences, 20, 545–572, https://doi.org/10.5194/bg-20-545-2023, https://doi.org/10.5194/bg-20-545-2023, 2023
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We measured and modelled the CO2 and CH4 fluxes of the terrestrial and aquatic ecosystems of the subarctic landscape for 2 years. The landscape was an annual CO2 sink and a CH4 source. The forest had the largest contribution to the landscape-level CO2 sink and the peatland to the CH4 emissions. The lakes released 24 % of the annual net C uptake of the landscape back to the atmosphere. The C fluxes were affected most by the rainy peak growing season of 2017 and the drought event in July 2018.
Petr Znachor, Jiří Nedoma, Vojtech Kolar, and Anna Matoušů
Biogeosciences Discuss., https://doi.org/10.5194/bg-2023-4, https://doi.org/10.5194/bg-2023-4, 2023
Revised manuscript accepted for BG
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We conducted intensive spatial sampling of the hypertrophic fishpond to better understand the spatial dynamics of methane fluxes and environmental heterogeneity in fishponds. The diffusive fluxes of methane accounted for only a minor fraction of the total fluxes, and both varied pronouncedly within the pond and over the studied summer season, which could be explained only by the water depth. Wind substantially affected temperature, oxygen and chlorophyll-a distribution in the pond.
Artem G. Lim, Ivan V. Krickov, Sergey N. Vorobyev, Mikhail A. Korets, Sergey Kopysov, Liudmila S. Shirokova, Jan Karlsson, and Oleg S. Pokrovsky
Biogeosciences, 19, 5859–5877, https://doi.org/10.5194/bg-19-5859-2022, https://doi.org/10.5194/bg-19-5859-2022, 2022
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In order to quantify C transport and emission and main environmental factors controlling the C cycle in Siberian rivers, we investigated the largest tributary of the Ob River, the Ket River basin, by measuring spatial and seasonal variations in carbon CO2 and CH4 concentrations and emissions together with hydrochemical analyses. The obtained results are useful for large-scale modeling of C emission and export fluxes from permafrost-free boreal rivers of an underrepresented region of the world.
Robert J. Parker, Chris Wilson, Edward Comyn-Platt, Garry Hayman, Toby R. Marthews, A. Anthony Bloom, Mark F. Lunt, Nicola Gedney, Simon J. Dadson, Joe McNorton, Neil Humpage, Hartmut Boesch, Martyn P. Chipperfield, Paul I. Palmer, and Dai Yamazaki
Biogeosciences, 19, 5779–5805, https://doi.org/10.5194/bg-19-5779-2022, https://doi.org/10.5194/bg-19-5779-2022, 2022
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Wetlands are the largest natural source of methane, one of the most important climate gases. The JULES land surface model simulates these emissions. We use satellite data to evaluate how well JULES reproduces the methane seasonal cycle over different tropical wetlands. It performs well for most regions; however, it struggles for some African wetlands influenced heavily by river flooding. We explain the reasons for these deficiencies and highlight how future development will improve these areas.
Saúl Edgardo Martínez Castellón, José Henrique Cattanio, José Francisco Berrêdo, Marcelo Rollnic, Maria de Lourdes Ruivo, and Carlos Noriega
Biogeosciences, 19, 5483–5497, https://doi.org/10.5194/bg-19-5483-2022, https://doi.org/10.5194/bg-19-5483-2022, 2022
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We seek to understand the influence of climatic seasonality and microtopography on CO2 and CH4 fluxes in an Amazonian mangrove. Topography and seasonality had a contrasting influence when comparing the two gas fluxes: CO2 fluxes were greater in high topography in the dry period, and CH4 fluxes were greater in the rainy season in low topography. Only CO2 fluxes were correlated with soil organic matter, the proportion of carbon and nitrogen, and redox potential.
Matthias Koschorreck, Klaus Holger Knorr, and Lelaina Teichert
Biogeosciences, 19, 5221–5236, https://doi.org/10.5194/bg-19-5221-2022, https://doi.org/10.5194/bg-19-5221-2022, 2022
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At low water levels, parts of the bottom of rivers fall dry. These beaches or mudflats emit the greenhouse gas carbon dioxide (CO2) to the atmosphere. We found that those emissions are caused by microbial reactions in the sediment and that they change with time. Emissions were influenced by many factors like temperature, water level, rain, plants, and light.
Wantong Zhang, Zhengyi Hu, Joachim Audet, Thomas A. Davidson, Enze Kang, Xiaoming Kang, Yong Li, Xiaodong Zhang, and Jinzhi Wang
Biogeosciences, 19, 5187–5197, https://doi.org/10.5194/bg-19-5187-2022, https://doi.org/10.5194/bg-19-5187-2022, 2022
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This work focused on the CH4 and N2O emissions from alpine peatlands in response to the interactive effects of altered water table levels and increased nitrogen deposition. Across the 2-year mesocosm experiment, nitrogen deposition showed nonlinear effects on CH4 emissions and linear effects on N2O emissions, and these N effects were associated with the water table levels. Our results imply the future scenario of strengthened CH4 and N2O emissions from an alpine peatland.
Karel Castro-Morales, Anna Canning, Sophie Arzberger, Will A. Overholt, Kirsten Küsel, Olaf Kolle, Mathias Göckede, Nikita Zimov, and Arne Körtzinger
Biogeosciences, 19, 5059–5077, https://doi.org/10.5194/bg-19-5059-2022, https://doi.org/10.5194/bg-19-5059-2022, 2022
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Permafrost thaw releases methane that can be emitted into the atmosphere or transported by Arctic rivers. Methane measurements are lacking in large Arctic river regions. In the Kolyma River (northeast Siberia), we measured dissolved methane to map its distribution with great spatial detail. The river’s edge and river junctions had the highest methane concentrations compared to other river areas. Microbial communities in the river showed that the river’s methane likely is from the adjacent land.
Sonja Gindorf, Hermann W. Bange, Dennis Booge, and Annette Kock
Biogeosciences, 19, 4993–5006, https://doi.org/10.5194/bg-19-4993-2022, https://doi.org/10.5194/bg-19-4993-2022, 2022
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Methane is a climate-relevant greenhouse gas which is emitted to the atmosphere from coastal areas such as the Baltic Sea. We measured the methane concentration in the water column of the western Kiel Bight. Methane concentrations were higher in September than in June. We found no relationship between the 2018 European heatwave and methane concentrations. Our results show that the methane distribution in the water column is strongly affected by temporal and spatial variabilities.
Margaret Capooci and Rodrigo Vargas
Biogeosciences, 19, 4655–4670, https://doi.org/10.5194/bg-19-4655-2022, https://doi.org/10.5194/bg-19-4655-2022, 2022
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Tidal salt marsh soil emits greenhouse gases, as well as sulfur-based gases, which play roles in global climate but are not well studied as they are difficult to measure. Traditional methods of measuring these gases worked relatively well for carbon dioxide, but less so for methane, nitrous oxide, carbon disulfide, and dimethylsulfide. High variability of trace gases complicates the ability to accurately calculate gas budgets and new approaches are needed for monitoring protocols.
Janne Rinne, Patryk Łakomiec, Patrik Vestin, Joel D. White, Per Weslien, Julia Kelly, Natascha Kljun, Lena Ström, and Leif Klemedtsson
Biogeosciences, 19, 4331–4349, https://doi.org/10.5194/bg-19-4331-2022, https://doi.org/10.5194/bg-19-4331-2022, 2022
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The study uses the stable isotope 13C of carbon in methane to investigate the origins of spatial and temporal variation in methane emitted by a temperate wetland ecosystem. The results indicate that methane production is more important for spatial variation than methane consumption by micro-organisms. Temporal variation on a seasonal timescale is most likely affected by more than one driver simultaneously.
Kukka-Maaria Kohonen, Roderick Dewar, Gianluca Tramontana, Aleksanteri Mauranen, Pasi Kolari, Linda M. J. Kooijmans, Dario Papale, Timo Vesala, and Ivan Mammarella
Biogeosciences, 19, 4067–4088, https://doi.org/10.5194/bg-19-4067-2022, https://doi.org/10.5194/bg-19-4067-2022, 2022
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Four different methods for quantifying photosynthesis (GPP) at ecosystem scale were tested, of which two are based on carbon dioxide (CO2) and two on carbonyl sulfide (COS) flux measurements. CO2-based methods are traditional partitioning, and a new method uses machine learning. We introduce a novel method for calculating GPP from COS fluxes, with potentially better applicability than the former methods. Both COS-based methods gave on average higher GPP estimates than the CO2-based estimates.
Lutz Beckebanze, Benjamin R. K. Runkle, Josefine Walz, Christian Wille, David Holl, Manuel Helbig, Julia Boike, Torsten Sachs, and Lars Kutzbach
Biogeosciences, 19, 3863–3876, https://doi.org/10.5194/bg-19-3863-2022, https://doi.org/10.5194/bg-19-3863-2022, 2022
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In this study, we present observations of lateral and vertical carbon fluxes from a permafrost-affected study site in the Russian Arctic. From this dataset we estimate the net ecosystem carbon balance for this study site. We show that lateral carbon export has a low impact on the net ecosystem carbon balance during the complete study period (3 months). Nevertheless, our results also show that lateral carbon export can exceed vertical carbon uptake at the beginning of the growing season.
Shahar Baram, Asher Bar-Tal, Alon Gal, Shmulik P. Friedman, and David Russo
Biogeosciences, 19, 3699–3711, https://doi.org/10.5194/bg-19-3699-2022, https://doi.org/10.5194/bg-19-3699-2022, 2022
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Static chambers are the most common tool used to measure greenhouse gas (GHG) fluxes. We tested the impact of such chambers on nitrous oxide emissions in drip irrigation. Field measurements and 3-D simulations show that the chamber base drastically affects the water and nutrient distribution in the soil and hence the measured GHG fluxes. A nomogram is suggested to determine the optimal diameter of a cylindrical chamber that ensures minimal disturbance.
Tracy E. Rankin, Nigel T. Roulet, and Tim R. Moore
Biogeosciences, 19, 3285–3303, https://doi.org/10.5194/bg-19-3285-2022, https://doi.org/10.5194/bg-19-3285-2022, 2022
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Peatland respiration is made up of plant and peat sources. How to separate these sources is not well known as peat respiration is not straightforward and is more influenced by vegetation dynamics than previously thought. Results of plot level measurements from shrubs and sparse grasses in a woody bog show that plants' respiration response to changes in climate is related to their different root structures, implying a difference in the mechanisms by which they obtain water resources.
Alison Bressler and Jennifer Blesh
Biogeosciences, 19, 3169–3184, https://doi.org/10.5194/bg-19-3169-2022, https://doi.org/10.5194/bg-19-3169-2022, 2022
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Our field experiment tested if a mixture of a nitrogen-fixing legume and non-legume cover crop could reduce nitrous oxide (N2O) emissions following tillage, compared to the legume grown alone. We found higher N2O following both legume treatments, compared to those without, and lower emissions from the cover crop mixture at one of the two test sites, suggesting that interactions between cover crop types and soil quality influence N2O emissions.
Sari Juutinen, Mika Aurela, Juha-Pekka Tuovinen, Viktor Ivakhov, Maiju Linkosalmi, Aleksi Räsänen, Tarmo Virtanen, Juha Mikola, Johanna Nyman, Emmi Vähä, Marina Loskutova, Alexander Makshtas, and Tuomas Laurila
Biogeosciences, 19, 3151–3167, https://doi.org/10.5194/bg-19-3151-2022, https://doi.org/10.5194/bg-19-3151-2022, 2022
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We measured CO2 and CH4 fluxes in heterogenous Arctic tundra in eastern Siberia. We found that tundra wetlands with sedge and grass vegetation contributed disproportionately to the landscape's ecosystem CO2 uptake and CH4 emissions to the atmosphere. Moreover, we observed high CH4 consumption in dry tundra, particularly in barren areas, offsetting part of the CH4 emissions from the wetlands.
Jessica Plein, Rulon W. Clark, Kyle A. Arndt, Walter C. Oechel, Douglas Stow, and Donatella Zona
Biogeosciences, 19, 2779–2794, https://doi.org/10.5194/bg-19-2779-2022, https://doi.org/10.5194/bg-19-2779-2022, 2022
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Tundra vegetation and the carbon balance of Arctic ecosystems can be substantially impacted by herbivory. We tested how herbivory by brown lemmings in individual enclosure plots have impacted carbon exchange of tundra ecosystems via altering carbon dioxide (CO2) and methane (CH4) fluxes. Lemmings significantly decreased net CO2 uptake while not affecting CH4 emissions. There was no significant difference in the subsequent growing season due to recovery of the vegetation.
Jenie Gil, Maija E. Marushchak, Tobias Rütting, Elizabeth M. Baggs, Tibisay Pérez, Alexander Novakovskiy, Tatiana Trubnikova, Dmitry Kaverin, Pertti J. Martikainen, and Christina Biasi
Biogeosciences, 19, 2683–2698, https://doi.org/10.5194/bg-19-2683-2022, https://doi.org/10.5194/bg-19-2683-2022, 2022
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N2O emissions from permafrost soils represent up to 11.6 % of total N2O emissions from natural soils, and their contribution to the global N2O budget will likely increase due to climate change. A better understanding of N2O production from permafrost soil is needed to evaluate the role of arctic ecosystems in the global N2O budget. By studying microbial N2O production processes in N2O hotspots in permafrost peatlands, we identified denitrification as the dominant source of N2O in these surfaces.
Christian Rödenbeck, Tim DeVries, Judith Hauck, Corinne Le Quéré, and Ralph F. Keeling
Biogeosciences, 19, 2627–2652, https://doi.org/10.5194/bg-19-2627-2022, https://doi.org/10.5194/bg-19-2627-2022, 2022
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The ocean is an important part of the global carbon cycle, taking up about a quarter of the anthropogenic CO2 emitted by burning of fossil fuels and thus slowing down climate change. However, the CO2 uptake by the ocean is, in turn, affected by variability and trends in climate. Here we use carbon measurements in the surface ocean to quantify the response of the oceanic CO2 exchange to environmental conditions and discuss possible mechanisms underlying this response.
Shuang Ma, Lifen Jiang, Rachel M. Wilson, Jeff P. Chanton, Scott Bridgham, Shuli Niu, Colleen M. Iversen, Avni Malhotra, Jiang Jiang, Xingjie Lu, Yuanyuan Huang, Jason Keller, Xiaofeng Xu, Daniel M. Ricciuto, Paul J. Hanson, and Yiqi Luo
Biogeosciences, 19, 2245–2262, https://doi.org/10.5194/bg-19-2245-2022, https://doi.org/10.5194/bg-19-2245-2022, 2022
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The relative ratio of wetland methane (CH4) emission pathways determines how much CH4 is oxidized before leaving the soil. We found an ebullition modeling approach that has a better performance in deep layer pore water CH4 concentration. We suggest using this approach in land surface models to accurately represent CH4 emission dynamics and response to climate change. Our results also highlight that both CH4 flux and belowground concentration data are important to constrain model parameters.
Mika Korkiakoski, Tiia Määttä, Krista Peltoniemi, Timo Penttilä, and Annalea Lohila
Biogeosciences, 19, 2025–2041, https://doi.org/10.5194/bg-19-2025-2022, https://doi.org/10.5194/bg-19-2025-2022, 2022
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We measured CH4 fluxes and production and oxidation potentials from irrigated and non-irrigated podzolic soil in a boreal forest. CH4 sink was smaller at the irrigated site but did not cause CH4 emission, with one exception. We also showed that under laboratory conditions, not only wet conditions, but also fresh carbon, are needed to make podzolic soil into a CH4 source. Our study provides important data for improving the process models describing the upland soil CH4 dynamics.
Sarah Shakil, Suzanne E. Tank, Jorien E. Vonk, and Scott Zolkos
Biogeosciences, 19, 1871–1890, https://doi.org/10.5194/bg-19-1871-2022, https://doi.org/10.5194/bg-19-1871-2022, 2022
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Permafrost thaw-driven landslides in the western Arctic are increasing organic carbon delivered to headwaters of drainage networks in the western Canadian Arctic by orders of magnitude. Through a series of laboratory experiments, we show that less than 10 % of this organic carbon is likely to be mineralized to greenhouse gases during transport in these networks. Rather most of the organic carbon is likely destined for burial and sequestration for centuries to millennia.
Wolfgang Fischer, Christoph K. Thomas, Nikita Zimov, and Mathias Göckede
Biogeosciences, 19, 1611–1633, https://doi.org/10.5194/bg-19-1611-2022, https://doi.org/10.5194/bg-19-1611-2022, 2022
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Arctic permafrost ecosystems may release large amounts of carbon under warmer future climates and may therefore accelerate global climate change. Our study investigated how long-term grazing by large animals influenced ecosystem characteristics and carbon budgets at a Siberian permafrost site. Our results demonstrate that such management can contribute to stabilizing ecosystems to keep carbon in the ground, particularly through drying soils and reducing methane emissions.
Dong-Gill Kim, Ben Bond-Lamberty, Youngryel Ryu, Bumsuk Seo, and Dario Papale
Biogeosciences, 19, 1435–1450, https://doi.org/10.5194/bg-19-1435-2022, https://doi.org/10.5194/bg-19-1435-2022, 2022
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As carbon (C) and greenhouse gas (GHG) research has adopted appropriate technology and approach (AT&A), low-cost instruments, open-source software, and participatory research and their results were well accepted by scientific communities. In terms of cost, feasibility, and performance, the integration of low-cost and low-technology, participatory and networking-based research approaches can be AT&A for enhancing C and GHG research in developing countries.
Lutz Beckebanze, Zoé Rehder, David Holl, Christian Wille, Charlotta Mirbach, and Lars Kutzbach
Biogeosciences, 19, 1225–1244, https://doi.org/10.5194/bg-19-1225-2022, https://doi.org/10.5194/bg-19-1225-2022, 2022
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Arctic permafrost landscapes feature many water bodies. In contrast to the terrestrial parts of the landscape, the water bodies release carbon to the atmosphere. We compare carbon dioxide and methane fluxes from small water bodies to the surrounding tundra and find not accounting for the carbon dioxide emissions leads to an overestimation of the tundra uptake by 11 %. Consequently, changes in hydrology and water body distribution may substantially impact the overall carbon budget of the Arctic.
Brian Scott, Andrew H. Baldwin, and Stephanie A. Yarwood
Biogeosciences, 19, 1151–1164, https://doi.org/10.5194/bg-19-1151-2022, https://doi.org/10.5194/bg-19-1151-2022, 2022
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Carbon dioxide and methane contribute to global warming. What can we do? We can build wetlands: they store carbon dioxide and should cause global cooling. But when first built they produce excess methane. Eventually built wetlands will cause cooling, but it may take decades or even centuries. How we build wetlands matters. We show that a common practice, using organic matter, such as manure, can make a big difference whether or not the wetlands we build start global cooling within our lifetime.
Jan Knappe, Celia Somlai, and Laurence W. Gill
Biogeosciences, 19, 1067–1085, https://doi.org/10.5194/bg-19-1067-2022, https://doi.org/10.5194/bg-19-1067-2022, 2022
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Two domestic on-site wastewater treatment systems have been monitored for greenhouse gas (carbon dioxide, methane and nitrous oxide) emissions coming from the process units, soil and vent pipes. This has enabled the net greenhouse gas per person to be quantified for the first time, as well as the impact of pre-treatment on the effluent before being discharged to soil. These decentralised wastewater treatment systems serve approx. 20 % of the population in both Europe and the United States.
Yanan Zhao, Dennis Booge, Christa A. Marandino, Cathleen Schlundt, Astrid Bracher, Elliot L. Atlas, Jonathan Williams, and Hermann W. Bange
Biogeosciences, 19, 701–714, https://doi.org/10.5194/bg-19-701-2022, https://doi.org/10.5194/bg-19-701-2022, 2022
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We present here, for the first time, simultaneously measured dimethylsulfide (DMS) seawater concentrations and DMS atmospheric mole fractions from the Peruvian upwelling region during two cruises in December 2012 and October 2015. Our results indicate low oceanic DMS concentrations and atmospheric DMS molar fractions in surface waters and the atmosphere, respectively. In addition, the Peruvian upwelling region was identified as an insignificant source of DMS emissions during both periods.
Moussa Moustapha, Loris Deirmendjian, David Sebag, Jean-Jacques Braun, Stéphane Audry, Henriette Ateba Bessa, Thierry Adatte, Carole Causserand, Ibrahima Adamou, Benjamin Ngounou Ngatcha, and Frédéric Guérin
Biogeosciences, 19, 137–163, https://doi.org/10.5194/bg-19-137-2022, https://doi.org/10.5194/bg-19-137-2022, 2022
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We monitor the spatio-temporal variability of organic and inorganic carbon (C) species in the tropical Nyong River (Cameroon), across groundwater and increasing stream orders. We show the significant contribution of wetland as a C source for tropical rivers. Thus, ignoring the river–wetland connectivity might lead to the misrepresentation of C dynamics in tropical watersheds. Finally, total fluvial carbon losses might offset ~10 % of the net C sink estimated for the whole Nyong watershed.
Alexander J. Turner, Philipp Köhler, Troy S. Magney, Christian Frankenberg, Inez Fung, and Ronald C. Cohen
Biogeosciences, 18, 6579–6588, https://doi.org/10.5194/bg-18-6579-2021, https://doi.org/10.5194/bg-18-6579-2021, 2021
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This work builds a high-resolution estimate (500 m) of gross primary productivity (GPP) over the US using satellite measurements of solar-induced chlorophyll fluorescence (SIF) from the TROPOspheric Monitoring Instrument (TROPOMI) between 2018 and 2020. We identify ecosystem-specific scaling factors for estimating gross primary productivity (GPP) from TROPOMI SIF. Extreme precipitation events drive four regional GPP anomalies that account for 28 % of year-to-year GPP differences across the US.
Paul Laris, Moussa Koné, Fadiala Dembélé, Christine M. Rodrigue, Lilian Yang, Rebecca Jacobs, and Quincy Laris
Biogeosciences, 18, 6229–6244, https://doi.org/10.5194/bg-18-6229-2021, https://doi.org/10.5194/bg-18-6229-2021, 2021
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Savanna fires play a key role in the global carbon cycle because they release methane. Although it burns the most, there are few studies from West Africa. We conducted 36 experimental fires according to local practice to collect smoke samples. We found that fires set early in the season had higher methane emissions than those set later, and head fires had double the emissions of backfires. We conclude policies to reduce emissions will not have the desired effects if fire type is not considered.
Johan H. Scheller, Mikhail Mastepanov, Hanne H. Christiansen, and Torben R. Christensen
Biogeosciences, 18, 6093–6114, https://doi.org/10.5194/bg-18-6093-2021, https://doi.org/10.5194/bg-18-6093-2021, 2021
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Our study presents a time series of methane emissions in a high-Arctic-tundra landscape over 14 summers, which shows large variations between years. The methane emissions from the valley are expected to more than double in the late 21st century. This warming increases permafrost thaw, which could increase surface erosion in the valley. Increased erosion could offset some of the rise in methane fluxes from the valley, but this would require large-scale impacts on vegetated surfaces.
Patryk Łakomiec, Jutta Holst, Thomas Friborg, Patrick Crill, Niklas Rakos, Natascha Kljun, Per-Ola Olsson, Lars Eklundh, Andreas Persson, and Janne Rinne
Biogeosciences, 18, 5811–5830, https://doi.org/10.5194/bg-18-5811-2021, https://doi.org/10.5194/bg-18-5811-2021, 2021
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Methane emission from the subarctic mire with heterogeneous permafrost status was measured for the years 2014–2016. Lower methane emission was measured from the palsa mire sector while the thawing wet sector emitted more. Both sectors have a similar annual pattern with a gentle rise during spring and a decrease during autumn. The highest emission was observed in the late summer. Winter emissions were positive during the measurement period and have a significant impact on the annual budgets.
Balázs Grosz, Reinhard Well, Rene Dechow, Jan Reent Köster, Mohammad Ibrahim Khalil, Simone Merl, Andreas Rode, Bianca Ziehmer, Amanda Matson, and Hongxing He
Biogeosciences, 18, 5681–5697, https://doi.org/10.5194/bg-18-5681-2021, https://doi.org/10.5194/bg-18-5681-2021, 2021
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To assure quality predictions biogeochemical models must be current. We use data measured using novel incubation methods to test the denitrification sub-modules of three models. We aim to identify limitations in the denitrification modeling to inform next steps for development. Several areas are identified, most urgently improved denitrification control parameters and further testing with high-temporal-resolution datasets. Addressing these would significantly improve denitrification modeling.
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Short summary
Chemical composition of plant litter controls C availability for biological N transformation processes in soil. In this study, we showed that easily degradable maize shoots stimulated microbial respiration and mineralization leading to high N2O formation in litter-associated hot spots. A higher share of slowly degradable C compounds and lower concentrations of water-soluble N restricted N2O emissions from maize roots. Bacterial community structure reflected degradability of maize litter.
Chemical composition of plant litter controls C availability for biological N transformation...
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