Articles | Volume 15, issue 4
https://doi.org/10.5194/bg-15-973-2018
© Author(s) 2018. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/bg-15-973-2018
© Author(s) 2018. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Research article
| 
19 Feb 2018
Research article |
| 19 Feb 2018
| 19 Feb 2018
Molecular fingerprinting of particulate organic matter as a new tool for its source apportionment: changes along a headwater drainage in coarse, medium and fine particles as a function of rainfalls
Laurent Jeanneau
CORRESPONDING AUTHOR
Univ rennes, CNRS, Geosciences Rennes – UMR 6118, 35000 Rennes,
France
Richard Rowland
Water Science & Policy Program, University of Delaware,
Newark, USA
Shreeram Inamdar
Water Science & Policy Program, University of Delaware,
Newark, USA
Related authors
Antonin Prijac, Laure Gandois, Laurent Jeanneau, Pierre Taillardat, and Michelle Garneau
Biogeosciences, 19, 4571–4588, https://doi.org/10.5194/bg-19-4571-2022, https://doi.org/10.5194/bg-19-4571-2022, 2022
Short summary
Short summary
Pools are common features of peatlands. We documented dissolved organic matter (DOM) composition in pools and peat of an ombrotrophic boreal peatland to understand its origin and potential role in the peatland carbon budget. The survey reveals that DOM composition differs between pools and peat, although it is derived from the peat vegetation. We investigated which processes are involved and estimated that the contribution of carbon emissions from DOM processing in pools could be substantial.
Justine Louis, Anniet M. Laverman, Emilie Jardé, Alexandrine Pannard, Marine Liotaud, Françoise Andrieux-Loyer, Gérard Gruau, Florian Caradec, Emilie Rabiller, Nathalie Lebris, and Laurent Jeanneau
Biogeosciences Discuss., https://doi.org/10.5194/bg-2021-318, https://doi.org/10.5194/bg-2021-318, 2021
Preprint withdrawn
Short summary
Short summary
This work has described the variability in sedimentary organic matter composition through a broad sampling campaign of marine mudflats at the regional scale (Brittany Region), and made the link with sediment potential biodegradability and nutrient release. In these coastal ecosystems affected by the eutrophication, the potential impact of human activities on the nutrient dynamics at the sediment-water interface was highlighted.
Volker Lohrmann, Qi Zhang, Peter Michalik, Jeremy Blaschke, Patrick Müller, Laurent Jeanneau, and Vincent Perrichot
Foss. Rec., 23, 215–236, https://doi.org/10.5194/fr-23-215-2020, https://doi.org/10.5194/fr-23-215-2020, 2020
Short summary
Short summary
A new mid-Cretaceous rhopalosomatid wasp, Cretolixon alatum Lohrmann gen. et sp. nov., is described from Burmese (Kachin) amber. The new genus has a unique mixture of characters, some of which are only known from the recent brachypterous genus Olixon and others of which are known only from the recent macropterous genera. Thus, Cretolixon not only provides further evidence for the monophyly of the family but also contributes evidence for the monophyly of the Rhopalosomatinae.
Volker Lohrmann, Michael Ohl, Peter Michalik, James P. Pitts, Laurent Jeanneau, and Vincent Perrichot
Foss. Rec., 22, 31–44, https://doi.org/10.5194/fr-22-31-2019, https://doi.org/10.5194/fr-22-31-2019, 2019
Short summary
Short summary
Here, we report three new fossil rhopalosomatid wasp specimens from Dominican and Mexican amber. Rhopalosoma hispaniola Lohrmann sp. nov. is described and documented from Dominican amber by two separate inclusions – one of each sex. An additional fossil female Rhopalosoma is described and documented from Mexican amber. The new fossils do not only represent the first fossil records of an extant genus of this peculiar family but also the first records of the family in Dominican and Mexican amber.
Marie Denis, Laurent Jeanneau, Patrice Petitjean, Anaëlle Murzeau, Marine Liotaud, Louison Yonnet, and Gérard Gruau
Biogeosciences, 14, 5039–5051, https://doi.org/10.5194/bg-14-5039-2017, https://doi.org/10.5194/bg-14-5039-2017, 2017
Short summary
Short summary
The results of this study highlight the changes of DOM composition in soil solutions and surface runoff, probably controlled by water-table dynamics and pre-event hydrological conditions. These changes should be taken into account for a better understanding of micropollutant mobility. Moreover, this work has implications for modeling DOM export in headwater catchments, as many studies assume that DOM transfer during storm events consists of the flushing of pre-existing soil solution DOM.
L. Jeanneau, M. Denis, A.-C. Pierson-Wickmann, G. Gruau, T. Lambert, and P. Petitjean
Biogeosciences, 12, 4333–4343, https://doi.org/10.5194/bg-12-4333-2015, https://doi.org/10.5194/bg-12-4333-2015, 2015
Short summary
Short summary
The origin of stream dissolved organic matter (DOM) in a lowland headwater catchment was investigated using high-frequency sampling combined with chemical biomarker analysis. Inter-storm stream DOM corresponds to the flushing of soil DOM reservoirs, while storm stream DOM would also result from three additional mechanisms: biofilm destabilization, surface and sub-surface erosion.
T. Lambert, A.-C. Pierson-Wickmann, G. Gruau, A. Jaffrezic, P. Petitjean, J. N. Thibault, and L. Jeanneau
Biogeosciences, 11, 3043–3056, https://doi.org/10.5194/bg-11-3043-2014, https://doi.org/10.5194/bg-11-3043-2014, 2014
Antonin Prijac, Laure Gandois, Laurent Jeanneau, Pierre Taillardat, and Michelle Garneau
Biogeosciences, 19, 4571–4588, https://doi.org/10.5194/bg-19-4571-2022, https://doi.org/10.5194/bg-19-4571-2022, 2022
Short summary
Short summary
Pools are common features of peatlands. We documented dissolved organic matter (DOM) composition in pools and peat of an ombrotrophic boreal peatland to understand its origin and potential role in the peatland carbon budget. The survey reveals that DOM composition differs between pools and peat, although it is derived from the peat vegetation. We investigated which processes are involved and estimated that the contribution of carbon emissions from DOM processing in pools could be substantial.
Justine Louis, Anniet M. Laverman, Emilie Jardé, Alexandrine Pannard, Marine Liotaud, Françoise Andrieux-Loyer, Gérard Gruau, Florian Caradec, Emilie Rabiller, Nathalie Lebris, and Laurent Jeanneau
Biogeosciences Discuss., https://doi.org/10.5194/bg-2021-318, https://doi.org/10.5194/bg-2021-318, 2021
Preprint withdrawn
Short summary
Short summary
This work has described the variability in sedimentary organic matter composition through a broad sampling campaign of marine mudflats at the regional scale (Brittany Region), and made the link with sediment potential biodegradability and nutrient release. In these coastal ecosystems affected by the eutrophication, the potential impact of human activities on the nutrient dynamics at the sediment-water interface was highlighted.
Volker Lohrmann, Qi Zhang, Peter Michalik, Jeremy Blaschke, Patrick Müller, Laurent Jeanneau, and Vincent Perrichot
Foss. Rec., 23, 215–236, https://doi.org/10.5194/fr-23-215-2020, https://doi.org/10.5194/fr-23-215-2020, 2020
Short summary
Short summary
A new mid-Cretaceous rhopalosomatid wasp, Cretolixon alatum Lohrmann gen. et sp. nov., is described from Burmese (Kachin) amber. The new genus has a unique mixture of characters, some of which are only known from the recent brachypterous genus Olixon and others of which are known only from the recent macropterous genera. Thus, Cretolixon not only provides further evidence for the monophyly of the family but also contributes evidence for the monophyly of the Rhopalosomatinae.
Volker Lohrmann, Michael Ohl, Peter Michalik, James P. Pitts, Laurent Jeanneau, and Vincent Perrichot
Foss. Rec., 22, 31–44, https://doi.org/10.5194/fr-22-31-2019, https://doi.org/10.5194/fr-22-31-2019, 2019
Short summary
Short summary
Here, we report three new fossil rhopalosomatid wasp specimens from Dominican and Mexican amber. Rhopalosoma hispaniola Lohrmann sp. nov. is described and documented from Dominican amber by two separate inclusions – one of each sex. An additional fossil female Rhopalosoma is described and documented from Mexican amber. The new fossils do not only represent the first fossil records of an extant genus of this peculiar family but also the first records of the family in Dominican and Mexican amber.
Marie Denis, Laurent Jeanneau, Patrice Petitjean, Anaëlle Murzeau, Marine Liotaud, Louison Yonnet, and Gérard Gruau
Biogeosciences, 14, 5039–5051, https://doi.org/10.5194/bg-14-5039-2017, https://doi.org/10.5194/bg-14-5039-2017, 2017
Short summary
Short summary
The results of this study highlight the changes of DOM composition in soil solutions and surface runoff, probably controlled by water-table dynamics and pre-event hydrological conditions. These changes should be taken into account for a better understanding of micropollutant mobility. Moreover, this work has implications for modeling DOM export in headwater catchments, as many studies assume that DOM transfer during storm events consists of the flushing of pre-existing soil solution DOM.
Phil-Goo Kang, Myron J. Mitchell, Patrick J. McHale, Charles T. Driscoll, Shreeram Inamdar, and Ji-Hyung Park
Biogeosciences, 13, 2787–2801, https://doi.org/10.5194/bg-13-2787-2016, https://doi.org/10.5194/bg-13-2787-2016, 2016
Short summary
Short summary
Lakes play important roles in controlling organic matter derived from watersheds and within-lake production. The organic matter is normally measured by elemental quantities, such as carbon(C) and nitrogen(N), because the two elements are essential for aquatic ecosystems. We observed an decrease of C, but an increase of N in organic matters in a lake. The reason of the different pattern might be that inorganic N in the lake appeared to be recycled to produce organic N due to within-lake processes.
L. Jeanneau, M. Denis, A.-C. Pierson-Wickmann, G. Gruau, T. Lambert, and P. Petitjean
Biogeosciences, 12, 4333–4343, https://doi.org/10.5194/bg-12-4333-2015, https://doi.org/10.5194/bg-12-4333-2015, 2015
Short summary
Short summary
The origin of stream dissolved organic matter (DOM) in a lowland headwater catchment was investigated using high-frequency sampling combined with chemical biomarker analysis. Inter-storm stream DOM corresponds to the flushing of soil DOM reservoirs, while storm stream DOM would also result from three additional mechanisms: biofilm destabilization, surface and sub-surface erosion.
T. Lambert, A.-C. Pierson-Wickmann, G. Gruau, A. Jaffrezic, P. Petitjean, J. N. Thibault, and L. Jeanneau
Biogeosciences, 11, 3043–3056, https://doi.org/10.5194/bg-11-3043-2014, https://doi.org/10.5194/bg-11-3043-2014, 2014
Related subject area
Biogeochemistry: Organic Biogeochemistry
Recently fixed carbon fuels microbial activity several meters below the soil surface
Distributions of bacteriohopanepolyols in lakes and coastal lagoons of the Azores Archipelago
Environmental and hydrologic controls on sediment and organic carbon export from a subalpine catchment: insights from a time series
Climate and geology overwrite land use effects on soil organic nitrogen cycling on a continental scale
Potential bioavailability of pyrogenic organic matter resembles natural dissolved organic matter pools
Compositions of dissolved organic matter in the ice-covered waters above the Aurora hydrothermal vent system, Gakkel Ridge, Arctic Ocean
Organic matter characteristics of a rapidly eroding permafrost cliff in NE Siberia (Lena Delta, Laptev Sea region)
Microbial labilization and diversification of pyrogenic dissolved organic matter
Bacterial and eukaryotic intact polar lipids point to in situ production as a key source of labile organic matter in hadal surface sediment of the Atacama Trench
What can we learn from amino acids about oceanic organic matter cycling and degradation?
Bacteriohopanetetrol-x: constraining its application as a lipid biomarker for marine anammox using the water column oxygen gradient of the Benguela upwelling system
Active and passive fluxes of carbon, nitrogen, and phosphorus in the northern South China Sea
Cyanobacteria net community production in the Baltic Sea as inferred from profiling pCO2 measurements
Reviews and syntheses: Heterotrophic fixation of inorganic carbon – significant but invisible flux in environmental carbon cycling
Revised fractional abundances and warm-season temperatures substantially improve brGDGT calibrations in lake sediments
Archaeal intact polar lipids in polar waters: a comparison between the Amundsen and Scotia seas
Reproducible determination of dissolved organic matter photosensitivity
Technical note: Uncovering the influence of methodological variations on the extractability of iron-bound organic carbon
Anthropocene climate warming enhances autochthonous carbon cycling in an upland Arctic lake, Disko Island, West Greenland
Novel hydrocarbon-utilizing soil mycobacteria synthesize unique mycocerosic acids at a Sicilian everlasting fire
Alkenone isotopes show evidence of active carbon concentrating mechanisms in coccolithophores as aqueous carbon dioxide concentrations fall below 7 µmol L−1
Seasonal variability and sources of in situ brGDGT production in a permanently stratified African crater lake
Sediment release of dissolved organic matter to the oxygen minimum zone off Peru
Better molecular preservation of organic matter in an oxic than in a sulfidic depositional environment: evidence from Thalassiphora pelagica (Dinoflagellata, Eocene) cysts
Assessing branched tetraether lipids as tracers of soil organic carbon transport through the Carminowe Creek catchment (southwest England)
The nonconservative distribution pattern of organic matter in the Rajang, a tropical river with peatland in its estuary
Predominance of hexamethylated 6-methyl branched glycerol dialkyl glycerol tetraethers in the Mariana Trench: source and environmental implication
High-pH and anoxic conditions during soil organic matter extraction increases its electron-exchange capacity and ability to stimulate microbial Fe(III) reduction by electron shuttling
Sterol preservation in hypersaline microbial mats
Structural elucidation and environmental distributions of butanetriol and pentanetriol dialkyl glycerol tetraethers (BDGTs and PDGTs)
Distribution and degradation of terrestrial organic matter in the sediments of peat-draining rivers, Sarawak, Malaysian Borneo
Validation of carbon isotope fractionation in algal lipids as a pCO2 proxy using a natural CO2 seep (Shikine Island, Japan)
Composition and cycling of dissolved organic matter from tropical peatlands of coastal Sarawak, Borneo, revealed by fluorescence spectroscopy and parallel factor analysis
Latitudinal variations in δ30Si and δ15N signatures along the Peruvian shelf: quantifying the effects of nutrient utilization versus denitrification over the past 600 years
Diapycnal dissolved organic matter supply into the upper Peruvian oxycline
Composition and vertical flux of particulate organic matter to the oxygen minimum zone of the central Baltic Sea: impact of a sporadic North Sea inflow
Main drivers of transparent exopolymer particle distribution across the surface Atlantic Ocean
Biochemical and structural controls on the decomposition dynamics of boreal upland forest moss tissues
Spatiotemporal transformation of dissolved organic matter along an alpine stream flow path on the Qinghai–Tibet Plateau: importance of source and permafrost degradation
A quest for the biological sources of long chain alkyl diols in the western tropical North Atlantic Ocean
Long-chain diols in rivers: distribution and potential biological sources
Leaf wax n-alkanes in modern plants and topsoils from eastern Georgia (Caucasus) – implications for reconstructing regional paleovegetation
The role of diatom resting spores in pelagic–benthic coupling in the Southern Ocean
Calcium content and high calcium adaptation of plants in karst areas of southwestern Hunan, China
Substrate potential of last interglacial to Holocene permafrost organic matter for future microbial greenhouse gas production
Variation pattern of particulate organic carbon and nitrogen in oceans and inland waters
C5 glycolipids of heterocystous cyanobacteria track symbiont abundance in the diatom Hemiaulus hauckii across the tropical North Atlantic
Variations and determinants of carbon content in plants: a global synthesis
The Holocene sedimentary record of cyanobacterial glycolipids in the Baltic Sea: an evaluation of their application as tracers of past nitrogen fixation
Technical note: An inverse method to relate organic carbon reactivity to isotope composition from serial oxidation
Andrea Scheibe, Carlos A. Sierra, and Marie Spohn
Biogeosciences, 20, 827–838, https://doi.org/10.5194/bg-20-827-2023, https://doi.org/10.5194/bg-20-827-2023, 2023
Short summary
Short summary
We explored carbon cycling in soils in three climate zones in Chile down to a depth of 6 m, using carbon isotopes. Our results show that microbial activity several meters below the soil surface is mostly fueled by recently fixed carbon and that strong decomposition of soil organic matter only occurs in the upper decimeters of the soils. The study shows that different layers of the critical zone are tightly connected and that processes in the deep soil depend on recently fixed carbon.
Nora Richter, Ellen C. Hopmans, Danica Mitrović, Pedro M. Raposeiro, Vítor Gonçalves, Ana C. Costa, Linda A. Amaral-Zettler, Laura Villanueva, and Darci Rush
Biogeosciences Discuss., https://doi.org/10.5194/bg-2023-29, https://doi.org/10.5194/bg-2023-29, 2023
Revised manuscript accepted for BG
Short summary
Short summary
Bacteriohopanepolyols (BHPs) are a diverse class of lipids produced by bacteria across a wide range of environments. This study characterizes the diversity of BHPs in lakes and coastal lagoons from the Azores Archipelago, as well as a co-culture enriched for methanotrophs. We highlight the potential of BHPs as taxonomic markers for bacteria associated with certain ecological niches, which can be preserved in sedimentary records.
Melissa Sophia Schwab, Hannah Gies, Chantal Valérie Freymond, Maarten Lupker, Negar Haghipour, and Timothy Ian Eglinton
Biogeosciences, 19, 5591–5616, https://doi.org/10.5194/bg-19-5591-2022, https://doi.org/10.5194/bg-19-5591-2022, 2022
Short summary
Short summary
The majority of river studies focus on headwater or floodplain systems, while often neglecting intermediate river segments. Our study on the subalpine Sihl River bridges the gap between streams and lowlands and demonstrates that moderately steep river segments are areas of significant instream alterations, modulating the export of organic carbon over short distances.
Lisa Noll, Shasha Zhang, Qing Zheng, Yuntao Hu, Florian Hofhansl, and Wolfgang Wanek
Biogeosciences, 19, 5419–5433, https://doi.org/10.5194/bg-19-5419-2022, https://doi.org/10.5194/bg-19-5419-2022, 2022
Short summary
Short summary
Cleavage of proteins to smaller nitrogen compounds allows microorganisms and plants to exploit the largest nitrogen reservoir in soils and is considered the bottleneck in soil organic nitrogen cycling. Results from soils covering a European transect show that protein turnover is constrained by soil geochemistry, shifts in climate and associated alterations in soil weathering and should be considered as a driver of soil nitrogen availability with repercussions on carbon cycle processes.
Emily B. Graham, Hyun-Seob Song, Samantha Grieger, Vanessa Garayburu-Caruso, James Stegen, Kevin D. Bladon, and Allison Myers-Pigg
EGUsphere, https://doi.org/10.5194/egusphere-2022-194, https://doi.org/10.5194/egusphere-2022-194, 2022
Short summary
Short summary
Intensifying wildfires are increasing pyrogenic organic matter (PyOM) production and its impact on water quality. Recent work indicates that PyOM may have greater impact on aquatic biogeochemistry than previously assumed, driven by higher bioavailability. We provide a full assessment of the potential bioavailability of PyOM across its chemical spectrum. We indicate that PyOM can be actively transformed within the river corridor, and therefore, may be a growing source of riverine C emissions.
Muhammed Fatih Sert, Helge Niemann, Eoghan P. Reeves, Mats A. Granskog, Kevin P. Hand, Timo Kekäläinen, Janne Jänis, Pamela E. Rossel, Bénédicte Ferré, Anna Silyakova, and Friederike Gründger
Biogeosciences, 19, 2101–2120, https://doi.org/10.5194/bg-19-2101-2022, https://doi.org/10.5194/bg-19-2101-2022, 2022
Short summary
Short summary
We investigate organic matter composition in the Arctic Ocean water column. We collected seawater samples from sea ice to deep waters at six vertical profiles near an active hydrothermal vent and its plume. In comparison to seawater, we found that the organic matter in waters directly affected by the hydrothermal plume had different chemical composition. We suggest that hydrothermal processes may influence the organic matter distribution in the deep ocean.
Charlotte Haugk, Loeka L. Jongejans, Kai Mangelsdorf, Matthias Fuchs, Olga Ogneva, Juri Palmtag, Gesine Mollenhauer, Paul J. Mann, P. Paul Overduin, Guido Grosse, Tina Sanders, Robyn E. Tuerena, Lutz Schirrmeister, Sebastian Wetterich, Alexander Kizyakov, Cornelia Karger, and Jens Strauss
Biogeosciences, 19, 2079–2094, https://doi.org/10.5194/bg-19-2079-2022, https://doi.org/10.5194/bg-19-2079-2022, 2022
Short summary
Short summary
Buried animal and plant remains (carbon) from the last ice age were freeze-locked in permafrost. At an extremely fast eroding permafrost cliff in the Lena Delta (Siberia), we found this formerly frozen carbon well preserved. Our results show that ongoing degradation releases substantial amounts of this carbon, making it available for future carbon emissions. This mobilisation at the studied cliff and also similarly eroding sites bear the potential to affect rivers and oceans negatively.
Aleksandar I. Goranov, Andrew S. Wozniak, Kyle W. Bostick, Andrew R. Zimmerman, Siddhartha Mitra, and Patrick G. Hatcher
Biogeosciences, 19, 1491–1514, https://doi.org/10.5194/bg-19-1491-2022, https://doi.org/10.5194/bg-19-1491-2022, 2022
Short summary
Short summary
Wildfire-derived molecules are ubiquitous in the aquatic environment, but their biological fate remains understudied. We have evaluated the compositional changes that occur to wildfire-derived molecules after incubation with soil microbes. We observe a significant degradation but also a production of numerous new labile molecules. Our results indicate that wildfire-derived molecules can be broken down and the carbon and nitrogen therein can be incorporated into microbial food webs.
Edgart Flores, Sebastian I. Cantarero, Paula Ruiz-Fernández, Nadia Dildar, Matthias Zabel, Osvaldo Ulloa, and Julio Sepúlveda
Biogeosciences, 19, 1395–1420, https://doi.org/10.5194/bg-19-1395-2022, https://doi.org/10.5194/bg-19-1395-2022, 2022
Short summary
Short summary
In this study, we investigate the chemical diversity and abundance of microbial lipids as markers of organic matter sources in the deepest points of the Atacama Trench sediments and compare them to similar lipid stocks in shallower surface sediments and in the overlying water column. We evaluate possible organic matter provenance and some potential chemical adaptations of the in situ microbial community to the extreme conditions of high hydrostatic pressure in hadal realm.
Birgit Gaye, Niko Lahajnar, Natalie Harms, Sophie Anna Luise Paul, Tim Rixen, and Kay-Christian Emeis
Biogeosciences, 19, 807–830, https://doi.org/10.5194/bg-19-807-2022, https://doi.org/10.5194/bg-19-807-2022, 2022
Short summary
Short summary
Amino acids were analyzed in a large number of samples of particulate and dissolved organic matter from coastal regions and the open ocean. A statistical analysis produced two new biogeochemical indicators. An indicator of sinking particle and sediment degradation (SDI) traces the degradation of organic matter from the surface waters into the sediments. A second indicator shows the residence time of suspended matter in the ocean (RTI).
Zoë R. van Kemenade, Laura Villanueva, Ellen C. Hopmans, Peter Kraal, Harry J. Witte, Jaap S. Sinninghe Damsté, and Darci Rush
Biogeosciences, 19, 201–221, https://doi.org/10.5194/bg-19-201-2022, https://doi.org/10.5194/bg-19-201-2022, 2022
Short summary
Short summary
Anaerobic ammonium oxidation (anammox) is an important nitrogen-removal process in the ocean. We assess the distribution of bacteriohopanetetrol-x (BHT-x), used to trace past anammox, along a redox gradient in the water column of the Benguela upwelling system. BHT-x / BHT ratios of >0.18 correspond to the presence of living anammox bacteria and oxygen levels <50 μmol L−1. This allows for a more robust application of BHT-x to trace past marine anammox and deoxygenation in dynamic marine systems.
Jia-Jang Hung, Ching-Han Tung, Zong-Ying Lin, Yuh-ling Lee Chen, Shao-Hung Peng, Yen-Huei Lin, and Li-Shan Tsai
Biogeosciences, 18, 5141–5162, https://doi.org/10.5194/bg-18-5141-2021, https://doi.org/10.5194/bg-18-5141-2021, 2021
Short summary
Short summary
We report measured active and passive fluxes and their controlling mechanisms in the northern South China Sea (NSCS). The total fluxes were higher than most reports in open oceans, indicating the significance of NSCS in atmospheric CO2 uptake and in storing that CO2 in the ocean’s interior. Winter cooling and extreme events enhanced nutrient availability and elevated fluxes. Global warming may have profound impacts on reducing ocean’s uptake and storage of CO2 in subtropical–tropical oceans.
Jens Daniel Müller, Bernd Schneider, Ulf Gräwe, Peer Fietzek, Marcus Bo Wallin, Anna Rutgersson, Norbert Wasmund, Siegfried Krüger, and Gregor Rehder
Biogeosciences, 18, 4889–4917, https://doi.org/10.5194/bg-18-4889-2021, https://doi.org/10.5194/bg-18-4889-2021, 2021
Short summary
Short summary
Based on profiling pCO2 measurements from a field campaign, we quantify the biomass production of a cyanobacteria bloom in the Baltic Sea, the export of which would foster deep water deoxygenation. We further demonstrate how this biomass production can be accurately reconstructed from long-term surface measurements made on cargo vessels in combination with modelled temperature profiles. This approach enables a better understanding of a severe concern for the Baltic’s good environmental status.
Alexander Braun, Marina Spona-Friedl, Maria Avramov, Martin Elsner, Federico Baltar, Thomas Reinthaler, Gerhard J. Herndl, and Christian Griebler
Biogeosciences, 18, 3689–3700, https://doi.org/10.5194/bg-18-3689-2021, https://doi.org/10.5194/bg-18-3689-2021, 2021
Short summary
Short summary
It is known that CO2 fixation by photoautotrophic organisms is the major sink from the atmosphere. While biologists are aware that CO2 fixation also occurs in heterotrophic organisms, this route of inorganic carbon, and its quantitative role, is hardly recognized in biogeochemistry. We demonstrate that a considerable amount of CO2 is fixed annually through anaplerotic reactions in heterotrophic organisms, and a significant quantity of inorganic carbon is temporally sequestered in biomass.
Jonathan H. Raberg, David J. Harning, Sarah E. Crump, Greg de Wet, Aria Blumm, Sebastian Kopf, Áslaug Geirsdóttir, Gifford H. Miller, and Julio Sepúlveda
Biogeosciences, 18, 3579–3603, https://doi.org/10.5194/bg-18-3579-2021, https://doi.org/10.5194/bg-18-3579-2021, 2021
Short summary
Short summary
BrGDGT lipids are a proxy for temperature in lake sediments, but other parameters like pH can influence them, and seasonality can affect the temperatures they record. We find a warm-season bias at 43 new high-latitude sites. We also present a new method that deconvolves the effects of temperature, pH, and conductivity and generate global calibrations for these variables. Our study provides new paleoclimate tools, insight into brGDGTs at the biochemical level, and a new method for future study.
Charlotte L. Spencer-Jones, Erin L. McClymont, Nicole J. Bale, Ellen C. Hopmans, Stefan Schouten, Juliane Müller, E. Povl Abrahamsen, Claire Allen, Torsten Bickert, Claus-Dieter Hillenbrand, Elaine Mawbey, Victoria Peck, Aleksandra Svalova, and James A. Smith
Biogeosciences, 18, 3485–3504, https://doi.org/10.5194/bg-18-3485-2021, https://doi.org/10.5194/bg-18-3485-2021, 2021
Short summary
Short summary
Long-term ocean temperature records are needed to fully understand the impact of West Antarctic Ice Sheet collapse. Glycerol dialkyl glycerol tetraethers (GDGTs) are powerful tools for reconstructing ocean temperature but can be difficult to apply to the Southern Ocean. Our results show active GDGT synthesis in relatively warm depths of the ocean. This research improves the application of GDGT palaeoceanographic proxies in the Southern Ocean.
Alec W. Armstrong, Leanne Powers, and Michael Gonsior
Biogeosciences, 18, 3367–3390, https://doi.org/10.5194/bg-18-3367-2021, https://doi.org/10.5194/bg-18-3367-2021, 2021
Short summary
Short summary
Living things decay into organic matter, which can dissolve into water (like tea brewing). Tea receives its color by absorbing light. Similarly, this material absorbs light, which can then cause chemical reactions that change it. By measuring changes in these optical properties, we found that materials from some places are more sensitive to light than others. Comparing sensitivity to light helps us understand where these materials come from and what happens as they move through water.
Ben J. Fisher, Johan C. Faust, Oliver W. Moore, Caroline L. Peacock, and Christian März
Biogeosciences, 18, 3409–3419, https://doi.org/10.5194/bg-18-3409-2021, https://doi.org/10.5194/bg-18-3409-2021, 2021
Short summary
Short summary
Organic carbon can be protected from microbial degradation in marine sediments through association with iron minerals on 1000-year timescales. Despite the importance of this carbon sink, our spatial and temporal understanding of iron-bound organic carbon interactions globally is poor. Here we show that caution must be applied when comparing quantification of iron-bound organic carbon extracted by different methods as the extraction strength and method specificity can be highly variable.
Mark A. Stevenson, Suzanne McGowan, Emma J. Pearson, George E. A. Swann, Melanie J. Leng, Vivienne J. Jones, Joseph J. Bailey, Xianyu Huang, and Erika Whiteford
Biogeosciences, 18, 2465–2485, https://doi.org/10.5194/bg-18-2465-2021, https://doi.org/10.5194/bg-18-2465-2021, 2021
Short summary
Short summary
We link detailed stable isotope and biomarker analyses from the catchments of three Arctic upland lakes on Disko Island (West Greenland) to a recent dated sediment core to understand how carbon cycling has changed over the past ~500 years. We find that the carbon deposited in sediments in these upland lakes is predominately sourced from in-lake production due to the catchment's limited terrestrial vegetation and elevation and that recent increases in algal production link with climate change.
Nadine T. Smit, Laura Villanueva, Darci Rush, Fausto Grassa, Caitlyn R. Witkowski, Mira Holzheimer, Adriaan J. Minnaard, Jaap S. Sinninghe Damsté, and Stefan Schouten
Biogeosciences, 18, 1463–1479, https://doi.org/10.5194/bg-18-1463-2021, https://doi.org/10.5194/bg-18-1463-2021, 2021
Short summary
Short summary
Soils from an everlasting fire (gas seep) in Sicily, Italy, reveal high relative abundances of novel uncultivated mycobacteria and unique 13C-depleted mycocerosic acids (multi-methyl branched fatty acids) close to the main gas seep. Our results imply that mycocerosic acids in combination with their depleted δ13C values offer a new biomarker tool to study the role of soil mycobacteria as hydrocarbon consumers in the modern and past global carbon cycle.
Marcus P. S. Badger
Biogeosciences, 18, 1149–1160, https://doi.org/10.5194/bg-18-1149-2021, https://doi.org/10.5194/bg-18-1149-2021, 2021
Short summary
Short summary
Reconstructing ancient atmospheric CO2 is an important aim of palaeoclimate science in order to understand the Earth's climate system. One method, the alkenone proxy based on molecular fossils of coccolithophores, has been recently shown to be ineffective at low-to-moderate CO2 levels. In this paper I show that this is likely due to changes in the biogeochemistry of the coccolithophores when there is low carbon availability, but for much of the Cenozoic the alkenone proxy should have utility.
Loes G. J. van Bree, Francien Peterse, Allix J. Baxter, Wannes De Crop, Sigrid van Grinsven, Laura Villanueva, Dirk Verschuren, and Jaap S. Sinninghe Damsté
Biogeosciences, 17, 5443–5463, https://doi.org/10.5194/bg-17-5443-2020, https://doi.org/10.5194/bg-17-5443-2020, 2020
Short summary
Short summary
Branched glycerol dialkyl glycerol tetraethers (brGDGTs) are used as a paleothermometer based on their temperature dependence in global soils, but aquatic production complicates their use in lakes. BrGDGTs in the water column of Lake Chala, East Africa, respond to oxygen conditions and mixing. Changes in their signal can be linked to bacterial community composition rather than membrane adaptation to changing conditions. Their integrated signal in the sediment reflects mean air temperature.
Alexandra N. Loginova, Andrew W. Dale, Frédéric A. C. Le Moigne, Sören Thomsen, Stefan Sommer, David Clemens, Klaus Wallmann, and Anja Engel
Biogeosciences, 17, 4663–4679, https://doi.org/10.5194/bg-17-4663-2020, https://doi.org/10.5194/bg-17-4663-2020, 2020
Short summary
Short summary
We measured dissolved organic carbon (DOC), nitrogen (DON) and matter (DOM) optical properties in pore waters and near-bottom waters of the eastern tropical South Pacific off Peru. The difference between diffusion-driven and net fluxes of DOC and DON and qualitative changes in DOM optical properties suggested active microbial utilisation of the released DOM at the sediment–water interface. Our results suggest that the sediment release of DOM contributes to microbial processes in the area.
Gerard J. M. Versteegh, Alexander J. P. Houben, and Karin A. F. Zonneveld
Biogeosciences, 17, 3545–3561, https://doi.org/10.5194/bg-17-3545-2020, https://doi.org/10.5194/bg-17-3545-2020, 2020
Short summary
Short summary
Anoxic sediments mostly contain much more organic matter than oxic ones, and therefore organic matter in anoxic settings is often considered to be preserved better than in oxic settings. However, through the analysis of the same fossil dinoflagellate cyst species from both oxic and anoxic settings, we show that at a molecular level the preservation in the oxic sediments may be better since in the anoxic setting the cyst macromolecule has been altered by postdepositional modification.
Jingjing Guo, Miriam Glendell, Jeroen Meersmans, Frédérique Kirkels, Jack J. Middelburg, and Francien Peterse
Biogeosciences, 17, 3183–3201, https://doi.org/10.5194/bg-17-3183-2020, https://doi.org/10.5194/bg-17-3183-2020, 2020
Short summary
Short summary
The fluxes of soil organic carbon (OC) transport from land to sea are poorly constrained, mostly due to the lack of a specific tracer for soil OC. Here we evaluate the use of specific molecules derived from soil bacteria as a tracer for soil OC in a small river catchment. We find that the initial soil signal is lost upon entering the aquatic environment. However, the local environmental history of the catchment is reflected by these molecules in the lake sediments that act as their sink.
Zhuo-Yi Zhu, Joanne Oakes, Bradley Eyre, Youyou Hao, Edwin Sien Aun Sia, Shan Jiang, Moritz Müller, and Jing Zhang
Biogeosciences, 17, 2473–2485, https://doi.org/10.5194/bg-17-2473-2020, https://doi.org/10.5194/bg-17-2473-2020, 2020
Short summary
Short summary
Samples were collected in August 2016 in the Rajang River and its estuary, with tropical forest in the river basin and peatland in the estuary. Organic matter composition was influenced by transportation in the river basin, whereas peatland added clear biodegraded parts to the fluvial organic matter, which implies modification of the initial lability and/or starting points in the subsequent degradation and alternation processes after the organic matter enters the sea.
Wenjie Xiao, Yasong Wang, Yongsheng Liu, Xi Zhang, Linlin Shi, and Yunping Xu
Biogeosciences, 17, 2135–2148, https://doi.org/10.5194/bg-17-2135-2020, https://doi.org/10.5194/bg-17-2135-2020, 2020
Short summary
Short summary
The hadal zone (6–11 km depth) is the least explored habitat on Earth. We studied microbial branched glycerol dialkyl glycerol tetraethers (brGDGTs) in the Challenger Deep, Mariana Trench. One unique feature is the strong predominance of 6-methyl brGDGT, which likely reflects an adaption of brGDGT-producing bacteria to alkaline seawater and low temperature. BrGDGTs, with elemental and isotopic data, suggest an autochthonous product for brGDGT. A new approach is proposed for brGDGT sourcing.
Yuge Bai, Edisson Subdiaga, Stefan B. Haderlein, Heike Knicker, and Andreas Kappler
Biogeosciences, 17, 683–698, https://doi.org/10.5194/bg-17-683-2020, https://doi.org/10.5194/bg-17-683-2020, 2020
Short summary
Short summary
Biogeochemical processes of SOM are key for greenhouse gas emission and water quality. We extracted SOM by water or by NaOH–HCl under oxic–anoxic conditions. Chemical and anoxic extractions lead to higher SOM electron exchange capacities, resulting in stimulation of microbial Fe(III) reduction. Therefore, aqueous pH-neutral SOM extracts should be used to reflect environmental SOM redox processes, and artifacts of chemical extractions need to be considered when evaluating SOM redox processes.
Yan Shen, Volker Thiel, Pablo Suarez-Gonzalez, Sebastiaan W. Rampen, and Joachim Reitner
Biogeosciences, 17, 649–666, https://doi.org/10.5194/bg-17-649-2020, https://doi.org/10.5194/bg-17-649-2020, 2020
Short summary
Short summary
Today, sterols are widespread in plants, animals, and fungi but are almost absent in the oldest rocks. Microbial mats, representing the earliest complex ecosystems on Earth, were omnipresent in Precambrian marine environments and may have degraded the sterols at that time. Here we analyze the distribution of sterols through a microbial mat. This provides insight into how variations in biological and nonbiological factors affect the preservation of sterols in modern and ancient microbial mats.
Sarah Coffinet, Travis B. Meador, Lukas Mühlena, Kevin W. Becker, Jan Schröder, Qing-Zeng Zhu, Julius S. Lipp, Verena B. Heuer, Matthew P. Crump, and Kai-Uwe Hinrichs
Biogeosciences, 17, 317–330, https://doi.org/10.5194/bg-17-317-2020, https://doi.org/10.5194/bg-17-317-2020, 2020
Short summary
Short summary
This study deals with two membrane lipids called BDGTs and PDGTs. Membrane lipids are molecules forming the cell envelope of all organisms. Different organisms produce different lipids thus they can be used to detect the presence of specific organisms in the environment. We analyzed the structure of these new lipids and looked for potential producers. We found that they are likely made by microbes emitting methane below the sediment surface and could be used to track these specific microbes.
Ying Wu, Kun Zhu, Jing Zhang, Moritz Müller, Shan Jiang, Aazani Mujahid, Mohd Fakharuddin Muhamad, and Edwin Sien Aun Sia
Biogeosciences, 16, 4517–4533, https://doi.org/10.5194/bg-16-4517-2019, https://doi.org/10.5194/bg-16-4517-2019, 2019
Short summary
Short summary
Our understanding of terrestrial organic matter (TOM) in tropical peat-draining rivers remains limited, especially in Southeast Asia. We explored the characteristics of TOM via bulk parameters and lignin phenols of sediment in Malaysia. This showed that the most important plant source of the organic matter in these rivers is woody angiosperm C3 plants with limited diagenetic alteration. This slower degradation of TOM may be a link to higher total nitrogen content, especially for the small river.
Caitlyn R. Witkowski, Sylvain Agostini, Ben P. Harvey, Marcel T. J. van der Meer, Jaap S. Sinninghe Damsté, and Stefan Schouten
Biogeosciences, 16, 4451–4461, https://doi.org/10.5194/bg-16-4451-2019, https://doi.org/10.5194/bg-16-4451-2019, 2019
Short summary
Short summary
Carbon dioxide concentrations (pCO2) in the atmosphere play an integral role in Earth system dynamics, especially climate. Past climates help us understand future ones, but reconstructing pCO2 over the geologic record remains a challenge. This research demonstrates new approaches for exploring past pCO2 via the carbon isotope fractionation in general algal lipids, which we test over a high CO2 gradient from a naturally occurring CO2 seep.
Yongli Zhou, Patrick Martin, and Moritz Müller
Biogeosciences, 16, 2733–2749, https://doi.org/10.5194/bg-16-2733-2019, https://doi.org/10.5194/bg-16-2733-2019, 2019
Short summary
Short summary
We found that peatlands in coastal Sarawak, Borneo, export extremely humified organic matter, which dominates the riverine organic matter pool and conservatively mixes with seawater, while the freshly produced fraction is low and stable in concentration at all salinities. We estimated that terrigenous fractions, which showed high photolability, still account for 20 % of the coastal dissolved organic carbon pool, implying the importance of peat-derived organic matter in the coastal carbon cycle.
Kristin Doering, Claudia Ehlert, Philippe Martinez, Martin Frank, and Ralph Schneider
Biogeosciences, 16, 2163–2180, https://doi.org/10.5194/bg-16-2163-2019, https://doi.org/10.5194/bg-16-2163-2019, 2019
Alexandra N. Loginova, Sören Thomsen, Marcus Dengler, Jan Lüdke, and Anja Engel
Biogeosciences, 16, 2033–2047, https://doi.org/10.5194/bg-16-2033-2019, https://doi.org/10.5194/bg-16-2033-2019, 2019
Short summary
Short summary
High primary production in the Peruvian upwelling system is followed by rapid heterotrophic utilization of organic matter and supports the formation of one of the most intense oxygen minimum zones (OMZs) in the world. Here, we estimated vertical fluxes of oxygen and dissolved organic matter (DOM) from the surface to the OMZ. Our results suggest that DOM remineralization substantially reduces oxygen concentration in the upper water column and controls the shape of the upper oxycline.
Carolina Cisternas-Novoa, Frédéric A. C. Le Moigne, and Anja Engel
Biogeosciences, 16, 927–947, https://doi.org/10.5194/bg-16-927-2019, https://doi.org/10.5194/bg-16-927-2019, 2019
Short summary
Short summary
We investigate the composition and vertical fluxes of POM in two deep basins of the Baltic Sea (GB: Gotland Basin and LD: Landsort Deep). The two basins showed different O2 regimes resulting from the intrusion of oxygen-rich water from the North Sea that ventilated the deep waters in GB, but not in LD.
In GB, O2 intrusions lead to a high abundance of manganese oxides that aggregate with POM, altering its composition and vertical flux and contributing to a higher POC transfer efficiency in GB.
Marina Zamanillo, Eva Ortega-Retuerta, Sdena Nunes, Pablo Rodríguez-Ros, Manuel Dall'Osto, Marta Estrada, Maria Montserrat Sala, and Rafel Simó
Biogeosciences, 16, 733–749, https://doi.org/10.5194/bg-16-733-2019, https://doi.org/10.5194/bg-16-733-2019, 2019
Short summary
Short summary
Many marine microorganisms produce polysaccharide-rich transparent exopolymer particles (TEPs) for rather unknown reasons but with important consequences for the ocean carbon cycle, sea–air gas exchange and formation of organic aerosols. Here we compare surface–ocean distributions of TEPs and physical, chemical and biological variables along a N–S transect in the Atlantic Ocean. Our data suggest that phytoplankton and not bacteria are the main TEP producers, and solar radiation acts as a sink.
Michael Philben, Sara Butler, Sharon A. Billings, Ronald Benner, Kate A. Edwards, and Susan E. Ziegler
Biogeosciences, 15, 6731–6746, https://doi.org/10.5194/bg-15-6731-2018, https://doi.org/10.5194/bg-15-6731-2018, 2018
Short summary
Short summary
We explored the relationship between chemical composition and the temperature sensitivity of moss decomposition using 959-day lab incubations. Mass loss was low despite the predominance of carbohydrates, indicating the persistence of labile C. Scanning electron microscopy revealed little change in the moss cell-wall structure. These results suggest that the moss cell-wall matrix protects labile C from decomposition, contributing to the globally important stocks of moss-derived C.
Yinghui Wang, Robert G. M. Spencer, David C. Podgorski, Anne M. Kellerman, Harunur Rashid, Phoebe Zito, Wenjie Xiao, Dandan Wei, Yuanhe Yang, and Yunping Xu
Biogeosciences, 15, 6637–6648, https://doi.org/10.5194/bg-15-6637-2018, https://doi.org/10.5194/bg-15-6637-2018, 2018
Short summary
Short summary
With global warming, thawing of permafrost releases dissolved organic matter (DOM) into streams. By analyzing DOM along an alpine stream on the Qinghai–Tibet Plateau, we found DOM was mainly from the active layer, but with deepening of the active layer, the contribution of the deep permafrost layer increased, causing a change in the chemical composition of DOM. From the head- to downstream, DOM is undergoing rapid degradation, but some components are persistent and can be transported downstream.
Sergio Balzano, Julie Lattaud, Laura Villanueva, Sebastiaan W. Rampen, Corina P. D. Brussaard, Judith van Bleijswijk, Nicole Bale, Jaap S. Sinninghe Damsté, and Stefan Schouten
Biogeosciences, 15, 5951–5968, https://doi.org/10.5194/bg-15-5951-2018, https://doi.org/10.5194/bg-15-5951-2018, 2018
Short summary
Short summary
We tried to identify the microbes which biosynthesize a class of lipids widespread in seawater, the long chain alkyl diols (LCDs). We could not find any microorganism likely involved in the production of LCDs. The amounts of LCDs found are too high to be produced by living organisms and are likely to be part of the refractory organic matter persisting for long periods in the water column.
Julie Lattaud, Frédérique Kirkels, Francien Peterse, Chantal V. Freymond, Timothy I. Eglinton, Jens Hefter, Gesine Mollenhauer, Sergio Balzano, Laura Villanueva, Marcel T. J. van der Meer, Ellen C. Hopmans, Jaap S. Sinninghe Damsté, and Stefan Schouten
Biogeosciences, 15, 4147–4161, https://doi.org/10.5194/bg-15-4147-2018, https://doi.org/10.5194/bg-15-4147-2018, 2018
Short summary
Short summary
Long-chain diols (LCDs) are biomarkers that occur widespread in marine environments and also in lakes and rivers. In this study, we looked at the distribution of LCDs in three river systems (Godavari, Danube, and Rhine) in relation to season, precipitation, and temperature. We found out that the LCDs are likely being produced in calm areas of the river systems and that marine LCDs have a different distribution than riverine LCDs.
Marcel Bliedtner, Imke K. Schäfer, Roland Zech, and Hans von Suchodoletz
Biogeosciences, 15, 3927–3936, https://doi.org/10.5194/bg-15-3927-2018, https://doi.org/10.5194/bg-15-3927-2018, 2018
Short summary
Short summary
In this study, we systematically analyze leaf wax derived n-alkane patterns in eastern Georgia to test their potential for paleoenvironmental reconstructions in the semi-humid to semi-arid central southern Caucasus region. We investigated the influence of vegetation types on the leaf wax signal in modern plants and topsoil material. Our results show distinct and systematic differences in the n-alkane patterns between vegetation types and prove their potential for vegetation reconstructions.
Mathieu Rembauville, Stéphane Blain, Clara Manno, Geraint Tarling, Anu Thompson, George Wolff, and Ian Salter
Biogeosciences, 15, 3071–3084, https://doi.org/10.5194/bg-15-3071-2018, https://doi.org/10.5194/bg-15-3071-2018, 2018
Short summary
Short summary
Sinking phytoplankton from the surface ocean provide the principal energy source to deep-ocean ecosystems. Our aim was to understand how different phytoplankton communities impact the chemical nature of this sinking material. We show certain types of phytoplankton can preferentially export energy-rich storage compounds to the seafloor. Any climate-driven effects on phytoplankton community structure could thus impact remote deep-ocean ecosystems thousands of kilometres beneath the surface.
Xiaocong Wei, Xiangwen Deng, Wenhua Xiang, Pifeng Lei, Shuai Ouyang, Hongfang Wen, and Liang Chen
Biogeosciences, 15, 2991–3002, https://doi.org/10.5194/bg-15-2991-2018, https://doi.org/10.5194/bg-15-2991-2018, 2018
Short summary
Short summary
Karst is a kind of typical calcium-rich environment, which is widely distributed. We measured the Ca2+ content of 41 plant species, as well as soil total Ca2+ and exchange Ca2+. We found out that different plants have different ways to high Ca2+ adaptation. According to the different high Ca2+ adaptation of the 17 dominant species, we divided them into 3 categories: Ca-indifferent plants, high-Ca plants and low-Ca plants. Our results can provide a theoretical basis for vegetation restoration.
Janina G. Stapel, Georg Schwamborn, Lutz Schirrmeister, Brian Horsfield, and Kai Mangelsdorf
Biogeosciences, 15, 1969–1985, https://doi.org/10.5194/bg-15-1969-2018, https://doi.org/10.5194/bg-15-1969-2018, 2018
Short summary
Short summary
Climate warming in the Arctic results in thawing of permafrost deposits. This promotes the accessibility of freeze-locked old organic matter (OM) accumulated during the past. Characterizing OM of different depositional ages, we were able to show that OM from last glacial Yedoma deposits possess the highest potential to provide organic substrates such as acetate for microbial greenhouse gas production and therefore to accelerate the carbon–climate feedback cycle during ongoing global warming.
Changchun Huang, Quanliang Jiang, Ling Yao, Hao Yang, Chen Lin, Tao Huang, A-Xing Zhu, and Yimin Zhang
Biogeosciences, 15, 1827–1841, https://doi.org/10.5194/bg-15-1827-2018, https://doi.org/10.5194/bg-15-1827-2018, 2018
Short summary
Short summary
The latitudinal dependency of POC / PON in ocean and inland water is significant, regulated by trophic state and climate, etc. factors. POC / PON significantly increased from coastal water (6.89 ± 2.38) to open ocean (7.59 ± 4.22) with the increasing rate of 0.0024 / km. The re-examination of the global relationship between, and variations in, POC and PON could be important for the global and regional coupling between the carbon and nitrogen cycles in the ocean and freshwater.
Nicole J. Bale, Tracy A. Villareal, Ellen C. Hopmans, Corina P. D. Brussaard, Marc Besseling, Denise Dorhout, Jaap S. Sinninghe Damsté, and Stefan Schouten
Biogeosciences, 15, 1229–1241, https://doi.org/10.5194/bg-15-1229-2018, https://doi.org/10.5194/bg-15-1229-2018, 2018
Short summary
Short summary
Associations between diatoms and N-fixing cyanobacteria (diatom–diazotroph associations, DDAs) play an important role in the N cycle of the tropical North Atlantic. Heterocysts are the site of N fixation and contain unique glycolipids. We measured these glycolipids in the water column and surface sediment from the tropical North Atlantic. We found a significant correlation between the concentration of glycolipid and of DDAs, strengthening their application as biomarkers.
Suhui Ma, Feng He, Di Tian, Dongting Zou, Zhengbing Yan, Yulong Yang, Tiancheng Zhou, Kaiyue Huang, Haihua Shen, and Jingyun Fang
Biogeosciences, 15, 693–702, https://doi.org/10.5194/bg-15-693-2018, https://doi.org/10.5194/bg-15-693-2018, 2018
Short summary
Short summary
Plant carbon (C) content is critical to the assessment of the global C cycle. Our results showed that the global average C contents in organs were significantly lower than a canonical value of 50 %. Plant C content tended to decrease with increasing latitude, and life form explained more variation than climate. Our findings suggest that specific C content values of different organs and life forms should be incorporated into the estimations of regional and global vegetation biomass C stocks.
Martina Sollai, Ellen C. Hopmans, Nicole J. Bale, Anchelique Mets, Lisa Warden, Matthias Moros, and Jaap S. Sinninghe Damsté
Biogeosciences, 14, 5789–5804, https://doi.org/10.5194/bg-14-5789-2017, https://doi.org/10.5194/bg-14-5789-2017, 2017
Short summary
Short summary
The Baltic Sea is characterized by recurring summer phytoplankton blooms, dominated by a few cyanobacterial species. These bacteria are able to use dinitrogen gas as the source for nitrogen and produce very specific lipids. We analyzed these lipids in a sediment core to study their presence over the past 7000 years. This reveals that cyanobacterial blooms have not only occurred in the last decades but were common at times when the Baltic was connected to the North Sea.
Jordon D. Hemingway, Daniel H. Rothman, Sarah Z. Rosengard, and Valier V. Galy
Biogeosciences, 14, 5099–5114, https://doi.org/10.5194/bg-14-5099-2017, https://doi.org/10.5194/bg-14-5099-2017, 2017
Short summary
Short summary
The balance between organic matter (OM) fixation and decay is a major control on atmospheric CO2 concentrations. Understanding the environmental, chemical, and physical mechanisms that control the distribution of OM decay rates is therefore critical for constraining the global carbon cycle. In this manuscript, we derive a method to relate OM reactivity to its isotope composition using a kinetic model and provide a novel framework to discern the controls on OM decay rates.
Cited articles
Adams, J. L., Tipping, E., Bryant, C. L., Helliwell, R. C., Toberman, H., and
Quinton, J.: Aged riverine particulate organic carbon in four UK catchments,
Sci. Total Environ., 536, 648–654, https://doi.org/10.1016/j.scitotenv.2015.06.141,
2015.
Armas-Herrera, C. M., Dignac, M.-F., Rumpel, C., Arbelo, C. D., and
Chabbi, A.: Management effects on composition and dynamics of cutin and
suberin in topsoil under agricultural use, Eur. J. Soil Sci., 67, 360–373,
https://doi.org/10.1111/ejss.12328, 2016.
Challinor, J. M.: Characterisation of wood by pyrolysis derivatisation – gas
chromatography/mass spectrometry, J. Anal. Appl. Pyrol., 35, 93–107,
https://doi.org/10.1016/0165-2370(95)00903-R, 1995.
Collins, A. L. and Walling, D. E.: Selecting fingerprint properties for
discriminating potential suspended sediment sources in river basins,
J. Hydrol., 261, 218–244, https://doi.org/10.1016/S0022-1694(02)00011-2, 2002.
Derenne, S. and Quénéa, K.: Analytical pyrolysis as a tool to probe
soil organic matter, J. Anal. Appl. Pyrol., 111, 108–120,
https://doi.org/10.1016/j.jaap.2014.12.001, 2015.
Dhillon, G. S. and Inamdar, S.: Extreme storms and changes in particulate and
dissolved organic carbon in runoff: Entering uncharted waters?, Geophys. Res.
Lett., 40, 1322–1327, https://doi.org/10.1002/grl.50306, 2013.
Dhillon, G. S. and Inamdar, S.: Storm event patterns of particulate organic
carbon (POC) for large storms and differences with dissolved organic carbon
(DOC), Biogeochemistry, 118, 61–81, https://doi.org/10.1007/s10533-013-9905-6, 2014.
Eglinton, G. and Hamilton, R. J.: Leaf epicuticular waxes, Science, 156,
1322–1335, 1967.
Fox, J. F. and Papanicolaou, A. N.: Application of the spatial distribution
of nitrogen stable isotopes for sediment tracing at the watershed scale,
J. Hydrol., 358, 46–55, https://doi.org/10.1016/j.jhydrol.2008.05.032, 2008.
Frank, D. A., Pontes, A. W., and McFarlane, K. J.: Controls on soil organic
carbon stocks and turnover among north american ecosystems, Ecosystems, 15,
604–615, https://doi.org/10.1007/s10021-012-9534-2, 2012.
Frostegård, Å., Tunlid, A., and Bååth, E.: Phospholipid fatty
acid composition, biomass, and activity of microbial communities from two
soil types experimentally exposed to different heavy metals, Appl. Environ.
Microb., 59, 3605–3617, 1993.
Galy, V., Peucker-Ehrenbrink, B., and Eglinton, T.: Global carbon export from
the terrestrial biosphere controlled by erosion, Nature, 521, 204–207, 2015.
Goñi, M. A., Hatten, J. A., Wheatcroft, R. A., and Borgeld, J. C.:
Particulate organic matter export by two contrasting small mountainous rivers
from the Pacific Northwest, USA, J. Geophys. Res.-Biogeo., 118, 112–134,
https://doi.org/10.1002/jgrg.20024, 2013.
Gourdin, E., Huon, S., Evrard, O., Ribolzi, O., Bariac, T.,
Sengtaheuanghoung, O., and Ayrault, S.: Sources and export of particle-borne
organic matter during a monsoon flood in a catchment of northern Laos,
Biogeosciences, 12, 1073–1089, https://doi.org/10.5194/bg-12-1073-2015, 2015.
Huon, S., Evrard, O., Gourdin, E., Lefèvre, I., Bariac, T., Reyss, J.-L.,
Henry des Tureaux, T., Sengtaheuanghoung, O., Ayrault, S., and Ribolzi, O.:
Suspended sediment source and propagation during monsoon events across nested
sub-catchments with contrasted land uses in Laos, J. Hydrol. Reg. Stud., 9,
69–84, https://doi.org/10.1016/j.ejrh.2016.11.018, 2017.
Inamdar, S., Johnson, E., Rowland, R., Warner, D., Walter, R., and
Merrits, D.: Freeze–thaw processes and intense rainfall: the one-two punch
for high sediment and nutrient loads from mid-Atlantic watersheds,
Biogeochemistry, https://doi.org/10.1007/s10533-017-0417-7, online first, 2017.
IPCC: Climate Change, The IPCC Third Assessment Report, Volumes I (Science),
II (Impacts and Adaptation) and III (Mitigation Strategies), Cambridge Univ.
Press, Cambridge, 2001.
Jeanneau, L. and Faure, P.: Quantification of fossil organic matter in
contaminated sediments from an industrial watershed: Validation of the
quantitative multimolecular approach by radiocarbon analysis, Sci. Total
Environ., 408, 4251–4256, 2010
Jeanneau, L., Jaffrezic, A., Pierson-Wickmann, A.-C., Gruau, G., Lambert, T.,
and Petitjean, P.: Constraints on the sources and production mechanisms of
dissolved organic matter in soils from molecular biomarkers, Vadose Zone J.,
13, 1–1, https://doi.org/10.2136/vzj2014.02.0015, 2014.
Jeanneau, L., Denis, M., Pierson-Wickmann, A.-C., Gruau, G., Lambert, T., and
Petitjean, P.: Sources of dissolved organic matter during storm and
inter-storm conditions in a lowland headwater catchment: constraints from
high-frequency molecular data, Biogeosciences, 12, 4333–4343,
https://doi.org/10.5194/bg-12-4333-2015, 2015.
Jeong, J.-J., Bartsch, S., Fleckenstein, J. H., Matzner, E., Tenhunen, J. D.,
Lee, S. D., Park, S. K., and Park, J.-H.: Differential storm responses of
dissolved and particulate organic carbon in a mountainous headwater stream,
investigated by high-frequency, in situ optical measurements, J. Geophys.
Res.-Biogeo., 117, G03013, https://doi.org/10.1029/2012JG001999, 2012.
Jung, B.-J., Lee, H.-J., Jeong, J.-J., Owen, J., Kim, B., Meusburger, K.,
Alewell, C., Gebauer, G., Shope, C., and Park, J.-H.: Storm pulses and
varying sources of hydrologic carbon export from a mountainous watershed,
J. Hydrol., 440, 90–101, https://doi.org/10.1016/j.jhydrol.2012.03.030, 2012.
Jung, B.-J., Lee, J.-K., Kim, H., and Park, J.-H.: Export, biodegradation,
and disinfection byproduct formation of dissolved and particulate organic
carbon in a forested headwater stream during extreme rainfall events,
Biogeosciences, 11, 6119–6129, https://doi.org/10.5194/bg-11-6119-2014, 2014.
Jung, B.-J., Jeanneau, L., Alewell, C., Kim, B., and Park, J.-H.: Downstream
alteration of the composition and biodegradability of particulate organic
carbon in a mountainous, mixed land-use watershed, Biogeochemistry, 122,
79–99, https://doi.org/10.1007/s10533-014-0032-9, 2015.
Koiter, A. J., Lobb, D. A., Owens, P. N., Petticrew, E. L.,
Tiessen, K. H. D., and Li, S.: Investigating the role of connectivity and
scale in assessing the sources of sediment in an agricultural watershed in
the Canadian prairies using sediment source fingerprinting, J. Soil
Sediment., 13, 1676–1691, https://doi.org/10.1007/s11368-013-0762-7, 2013.
Kolattukudy, P.: Polyesters in higher plants, in: Biopolyesters, vol. 71,
edited by: Babel, W. and Steinbüchel, A., Springer, Berlin Heidelberg,
1–49, https://doi.org/10.1007/3-540-40021-4_1, 2001.
Lee, C. S., Sung, T. M., Kim, H. S., and Jeon, C. H.: Classification of
forensic soil evidences by application of THM-PyGC/MS and multivariate
analysis, J. Anal. Appl. Pyrol., 96, 33–42,
https://doi.org/10.1016/j.jaap.2012.02.017, 2012.
Ludwig, W., Probst, J.-L., and Kempe, S.: Predicting the oceanic input of
organic carbon by continental erosion, Global Biogeochem. Cy., 10, 23–41,
https://doi.org/10.1029/95GB02925, 1996.
Mannino, A. and Harvey, H. R.: Terrigenous dissolved organic matter along an
estuarine gradient and its flux to the coastal ocean, Org. Geochem., 31,
1611–1625, https://doi.org/10.1016/S0146-6380(00)00099-1, 2000.
Mueller, K. E., Polissar, P. J., Oleksyn, J., and Freeman, K. H.:
Differentiating temperate tree species and their organs using lipid
biomarkers in leaves, roots and soil, Org. Geochem., 52, 130–141,
https://doi.org/10.1016/j.orggeochem.2012.08.014, 2012.
Nierop, K. G. J. and Verstraten, J. M.: Rapid molecular assessment of the
bioturbation extent in sandy soil horizons under pine using ester-bound
lipids by on-line thermally assisted hydrolysis and methylation-gas
chromatography/mass spectrometry, Rapid Commun. Mass Sp., 18, 1081–1088,
https://doi.org/10.1002/rcm.1449, 2004.
Nierop, K. G. J., Preston, C. M., and Kaal, J.: Thermally assisted hydrolysis
and methylation of purified tannins from plants, Anal. Chem., 77, 5604–5614,
https://doi.org/10.1021/ac050564r, 2005.
Nosrati, K., Govers, G., Ahmadi, H., Sharifi, F., Amoozegar, M. A.,
Merckx, R., and VanMaerke, M.: An exploratory study on the use of enzyme
activities as sediment tracers: biochemical fingerprints?, Int. J. Sediment.
Res., 26, 136–151, https://doi.org/10.1016/S1001-6279(11)60082-6, 2011.
Oeurng, C., Sauvage, S., Coynel, A., Maneux, E., Etcheber, H., and
Sánchez-Pérez, J.-M.: Fluvial transport of suspended sediment and
organic carbon during flood events in a large agricultural catchment in
southwest France, Hydrol. Process., 25, 2365–2378, https://doi.org/10.1002/hyp.7999,
2011.
Raymond, P. A. and Oh, N.-H.: An empirical study of climatic controls on
riverine C export from three major US watersheds, Global Biogeochem. Cy., 21,
GB2022, https://doi.org/10.1029/2006GB002783, 2007.
Ritchie, J. C., Spraberry, J. A., and McHenry, J. R.: Estimating soil erosion
from the redistribution of fallout 137Cs, Soil Sci. Soc. Am. J.,
38, 137–139, https://doi.org/10.2136/sssaj1974.03615995003800010042x, 1974.
Rowland, R., Inamdar, S., and Parr, T.: Evolution of particulate organic
matter (POM) along a headwater drainage: role of sources, particle size
class, and storm magnitude, Biogeochemistry, 133, 181–200,
https://doi.org/10.1007/s10533-017-0325-x, 2017.
Smith, J. C., Galy, A., Hovius, N., Tye, A. M., Turowski, J. M., and
Schleppi, P.: Runoff-driven export of particulate organic carbon from soil in
temperate forested uplands, Earth Planet. Sc. Lett., 365, 198–208,
https://doi.org/10.1016/j.epsl.2013.01.027, 2013.
Tamooh, F., Van den Meersche, K., Meysman, F., Marwick, T. R., Borges, A. V.,
Merckx, R., Dehairs, F., Schmidt, S., Nyunja, J., and Bouillon, S.:
Distribution and origin of suspended matter and organic carbon pools in the
Tana River Basin, Kenya, Biogeosciences, 9, 2905–2920,
https://doi.org/10.5194/bg-9-2905-2012, 2012.
Tank, J. L., Rosi-Marshall, E. J., Griffiths, N. A., Entrekin, S. A., and
Stephen, M. L.: A review of allochthonous organic matter dynamics and
metabolism in streams, J. N. Am. Benthol. Soc., 29, 118–146,
https://doi.org/10.1899/08-170.1, 2010.
Wallbrink, P. J. and Murray, A. S.: Distribution and variability of
7Be in soils under different surface cover conditions and its
potential for describing soil redistribution processes, Water Resour. Res.,
32, 467–476, https://doi.org/10.1029/95WR02973, 1996.
Walling, D. E.: Use of 137Cs and other fallout radionuclides in
soil erosion investigations: progress, problems and prospects, Joint FAO/IAEA
Division of Nuclear Techniques in Food and Agriculture, International Atomic
Energy Agency (IAEA), Vienna (Austria), available at:
http://www.iaea.org/inis/collection/NCLCollectionStore/_Public/29/049/29049354.pdf,
1998.
Walling, D. E.: The evolution of sediment source fingerprinting
investigations in fluvial systems, J. Soil Sediment., 13, 1658–1675,
https://doi.org/10.1007/s11368-013-0767-2, 2013.
Wang, X., Cammeraat, E. L. H., Romeijn, P., and Kalbitz, K.: Soil organic
carbon redistribution by water erosion – the role of CO2 emissions
for the carbon budget, Plos One, 9, e96299,
https://doi.org/10.1371/journal.pone.0096299, 2014.
Williams, J. S., Dungait, J. A. J., Bol, R., and Abbott, G. D.: Contrasting
temperature responses of dissolved organic carbon and phenols leached from
soils, Plant Soil, 399, 13–27, https://doi.org/10.1007/s11104-015-2678-z, 2016.
Wischmeier, W. H.: A rainfall erosion index for a universal soil-loss
equation1, Soil Sci. Soc. Am. J., 23, 246–249,
https://doi.org/10.2136/sssaj1959.03615995002300030027x, 1959.
Short summary
The source of particulate organic matter in headwaters during storm events remains an open question. We use the molecular composition of organic matter sampled during four spring–summer storms and compare it to potential sources. We identify litter, streambed and vicinal soils as the main sources of particulate organic matter. Their proportions depend on (i) the size of the catchment and (ii) the rain event.
The source of particulate organic matter in headwaters during storm events remains an open...
Altmetrics
Final-revised paper
Preprint