Articles | Volume 22, issue 12
https://doi.org/10.5194/bg-22-2935-2025
© Author(s) 2025. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/bg-22-2935-2025
© Author(s) 2025. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Research article
| 
25 Jun 2025
Research article |
| 25 Jun 2025
| 25 Jun 2025
Altered seasonal sensitivity of net ecosystem exchange to controls driven by nutrient balances in a semi-arid savanna
Biogeochemical Integration, Max Planck Institute for Biogeochemistry, Jena, Germany
Faculty of Chemistry and Earth Science, Friedrich Schiller University, Jena, Germany
Tarek S. El-Madany
Biogeochemical Integration, Max Planck Institute for Biogeochemistry, Jena, Germany
Jacob Nelson
Biogeochemical Integration, Max Planck Institute for Biogeochemistry, Jena, Germany
Arnaud Carrara
Fundacion Centro de Estudios Ambientales del Mediterráneo (CEAM), Valencia, Spain
Gerardo Moreno
Faculty of Forestry, Institute of Dehesa Research (INDEHESA), Universidad de Extremadura, Plasencia 10600, Spain
Richard Nair
Discipline of Botany, School of Natural Sciences, Trinity College Dublin, Dublin, Ireland
Yunpeng Luo
Forest Dynamics, Swiss Federal Institute for Forest, Snow and Landscape Research WSL, 8903 Birmensdorf, Switzerland
Anke Hildebrandt
Faculty of Chemistry and Earth Science, Friedrich Schiller University, Jena, Germany
Department Computational Hydrosystems, Helmholtz Centre for Environmental Research (UFZ), Leipzig, Germany
Victor Rolo
Faculty of Forestry, Institute of Dehesa Research (INDEHESA), Universidad de Extremadura, Plasencia 10600, Spain
Markus Reichstein
Biogeochemical Integration, Max Planck Institute for Biogeochemistry, Jena, Germany
Sung-Ching Lee
Biogeochemical Integration, Max Planck Institute for Biogeochemistry, Jena, Germany
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Zavud Baghirov, Markus Reichstein, Basil Kraft, Bernhard Ahrens, Marco Körner, and Martin Jung
EGUsphere, https://doi.org/10.5194/egusphere-2025-3123, https://doi.org/10.5194/egusphere-2025-3123, 2025
This preprint is open for discussion and under review for Geoscientific Model Development (GMD).
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We introduce a new global model that links how water and carbon move through land ecosystems. By combining process knowledge with artificial intelligence that learns from observations, we model daily changes in vegetation, water and carbon cycle processes. This model outperforms both purely data-driven and traditional process models, especially in dry and tropical regions. This advance could improve current understanding of water-carbon cycle relationships.
Friedrich J. Bohn, Ana Bastos, Romina Martin, Anja Rammig, Niak Sian Koh, Giles B. Sioen, Bram Buscher, Louise Carver, Fabrice DeClerck, Moritz Drupp, Robert Fletcher, Matthew Forrest, Alexandros Gasparatos, Alex Godoy-Faúndez, Gregor Hagedorn, Martin C. Hänsel, Jessica Hetzer, Thomas Hickler, Cornelia B. Krug, Stasja Koot, Xiuzhen Li, Amy Luers, Shelby Matevich, H. Damon Matthews, Ina C. Meier, Mirco Migliavacca, Awaz Mohamed, Sungmin O, David Obura, Ben Orlove, Rene Orth, Laura Pereira, Markus Reichstein, Lerato Thakholi, Peter H. Verburg, and Yuki Yoshida
Biogeosciences, 22, 2425–2460, https://doi.org/10.5194/bg-22-2425-2025, https://doi.org/10.5194/bg-22-2425-2025, 2025
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An interdisciplinary collaboration of 36 international researchers from 35 institutions highlights recent findings in biosphere research. Within eight themes, they discuss issues arising from climate change and other anthropogenic stressors and highlight the co-benefits of nature-based solutions and ecosystem services. Based on an analysis of these eight topics, we have synthesized four overarching insights.
Samuel Upton, Markus Reichstein, Wouter Peters, Santiago Botía, Jacob A. Nelson, Sophia Walther, Martin Jung, Fabian Gans, László Haszpra, and Ana Bastos
EGUsphere, https://doi.org/10.5194/egusphere-2025-2097, https://doi.org/10.5194/egusphere-2025-2097, 2025
This preprint is open for discussion and under review for Atmospheric Chemistry and Physics (ACP).
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We create a hybrid ecosystem-level carbon flux model using both eddy-covariance observations and observations of the atmospheric mole fraction of CO2 at three tall-tower observatories. Our study uses an atmospheric transport model (STILT) to connect the atmospheric signal to the ecosystem-level model. We show that this inclusion of atmospheric information meaningfully improves the model's representation of the interannual variability of the global net flux of CO2.
Zavud Baghirov, Martin Jung, Markus Reichstein, Marco Körner, and Basil Kraft
Geosci. Model Dev., 18, 2921–2943, https://doi.org/10.5194/gmd-18-2921-2025, https://doi.org/10.5194/gmd-18-2921-2025, 2025
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We use an innovative approach to studying the Earth's water cycle by integrating advanced machine learning techniques with a traditional water cycle model. Our model is designed to learn from observational data, with a particular emphasis on understanding the influence of vegetation on water movement. By closely aligning with real-world observations, our model offers new possibilities for enhancing our understanding of the water cycle and its interactions with vegetation.
Na Li, Sebastian Sippel, Nora Linscheid, Miguel D. Mahecha, Markus Reichstein, and Ana Bastos
EGUsphere, https://doi.org/10.5194/egusphere-2025-1924, https://doi.org/10.5194/egusphere-2025-1924, 2025
This preprint is open for discussion and under review for Biogeosciences (BG).
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The global land carbon sink has increased since the pre-industrial period, mainly caused by increasing atmospheric CO2 emissions and climate change. However, the large year-to-year variations can mask or amplify this trend. Here, we detect the time for the anthropogenic signal to emerge over natural variations in land carbon sink. We removed the circulation-induced variations in the global land carbon sink and effectively reduced the detection time of anthropogenic signal.
Alejandro Carrascosa, Gerardo Moreno, M. Francesca Cotrufo, Cristina Frade, Sara Rodrigo, and Víctor Rolo
EGUsphere, https://doi.org/10.5194/egusphere-2025-1711, https://doi.org/10.5194/egusphere-2025-1711, 2025
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Improved management practices such as rotational grazing, grazing exclusion, and legume enrichment can boost climate change mitigation and adaptation in grasslands. We studied the effects of these practices on soil organic carbon (SOC) stocks and fractions in semi-arid grasslands. Rotational grazing increased SOC, especially mineral-protected fraction, while exclusion reduced particulate organic carbon stocks. These outcomes were linked to changes in plant traits, soil microbes, and nutrients.
Marleen Pallandt, Marion Schrumpf, Holger Lange, Markus Reichstein, Lin Yu, and Bernhard Ahrens
Biogeosciences, 22, 1907–1928, https://doi.org/10.5194/bg-22-1907-2025, https://doi.org/10.5194/bg-22-1907-2025, 2025
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As soils warm due to climate change, soil organic carbon (SOC) decomposes faster due to increased microbial activity, given sufficient available moisture. We modelled the microbial decomposition of plant litter and residue at different depths and found that deep soil layers are more sensitive than topsoils. Warming causes SOC loss, but its extent depends on the litter type and its temperature sensitivity, which can either counteract or amplify losses. Droughts may also counteract warming-induced SOC losses.
Wolfgang Knorr, Matthew Williams, Tea Thum, Thomas Kaminski, Michael Voßbeck, Marko Scholze, Tristan Quaife, T. Luke Smallman, Susan C. Steele-Dunne, Mariette Vreugdenhil, Tim Green, Sönke Zaehle, Mika Aurela, Alexandre Bouvet, Emanuel Bueechi, Wouter Dorigo, Tarek S. El-Madany, Mirco Migliavacca, Marika Honkanen, Yann H. Kerr, Anna Kontu, Juha Lemmetyinen, Hannakaisa Lindqvist, Arnaud Mialon, Tuuli Miinalainen, Gaétan Pique, Amanda Ojasalo, Shaun Quegan, Peter J. Rayner, Pablo Reyes-Muñoz, Nemesio Rodríguez-Fernández, Mike Schwank, Jochem Verrelst, Songyan Zhu, Dirk Schüttemeyer, and Matthias Drusch
Geosci. Model Dev., 18, 2137–2159, https://doi.org/10.5194/gmd-18-2137-2025, https://doi.org/10.5194/gmd-18-2137-2025, 2025
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When it comes to climate change, the land surface is where the vast majority of impacts happen. The task of monitoring those impacts across the globe is formidable and must necessarily rely on satellites – at a significant cost: the measurements are only indirect and require comprehensive physical understanding. We have created a comprehensive modelling system that we offer to the research community to explore how satellite data can be better exploited to help us capture the changes that happen on our lands.
Wenli Zhao, Alexander J. Winkler, Markus Reichstein, Rene Orth, and Pierre Gentine
EGUsphere, https://doi.org/10.5194/egusphere-2025-365, https://doi.org/10.5194/egusphere-2025-365, 2025
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We developed a machine learning model that accounts for the memory effects of soil moisture and vegetation to predict Evaporative Fraction (EF) without relying on soil moisture as a direct input. The model accurately predicts EF during dry periods for the unseen sites, highlighting the key of meteorological memory effects. The learned memory effect related to rooting depth and soil water holding capacity could potentially serve as proxies for assessing the plant water stress.
Sven Armin Westermann, Anke Hildebrandt, Souhail Bousetta, and Stephan Thober
Biogeosciences, 21, 5277–5303, https://doi.org/10.5194/bg-21-5277-2024, https://doi.org/10.5194/bg-21-5277-2024, 2024
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Plants at the land surface mediate between soil and the atmosphere regarding water and carbon transport. Since plant growth is a dynamic process, models need to consider these dynamics. Two models that predict water and carbon fluxes by considering plant temporal evolution were tested against observational data. Currently, dynamizing plants in these models did not enhance their representativeness, which is caused by a mismatch between implemented physical relations and observable connections.
Jacob A. Nelson, Sophia Walther, Fabian Gans, Basil Kraft, Ulrich Weber, Kimberly Novick, Nina Buchmann, Mirco Migliavacca, Georg Wohlfahrt, Ladislav Šigut, Andreas Ibrom, Dario Papale, Mathias Göckede, Gregory Duveiller, Alexander Knohl, Lukas Hörtnagl, Russell L. Scott, Jiří Dušek, Weijie Zhang, Zayd Mahmoud Hamdi, Markus Reichstein, Sergio Aranda-Barranco, Jonas Ardö, Maarten Op de Beeck, Dave Billesbach, David Bowling, Rosvel Bracho, Christian Brümmer, Gustau Camps-Valls, Shiping Chen, Jamie Rose Cleverly, Ankur Desai, Gang Dong, Tarek S. El-Madany, Eugenie Susanne Euskirchen, Iris Feigenwinter, Marta Galvagno, Giacomo A. Gerosa, Bert Gielen, Ignacio Goded, Sarah Goslee, Christopher Michael Gough, Bernard Heinesch, Kazuhito Ichii, Marcin Antoni Jackowicz-Korczynski, Anne Klosterhalfen, Sara Knox, Hideki Kobayashi, Kukka-Maaria Kohonen, Mika Korkiakoski, Ivan Mammarella, Mana Gharun, Riccardo Marzuoli, Roser Matamala, Stefan Metzger, Leonardo Montagnani, Giacomo Nicolini, Thomas O'Halloran, Jean-Marc Ourcival, Matthias Peichl, Elise Pendall, Borja Ruiz Reverter, Marilyn Roland, Simone Sabbatini, Torsten Sachs, Marius Schmidt, Christopher R. Schwalm, Ankit Shekhar, Richard Silberstein, Maria Lucia Silveira, Donatella Spano, Torbern Tagesson, Gianluca Tramontana, Carlo Trotta, Fabio Turco, Timo Vesala, Caroline Vincke, Domenico Vitale, Enrique R. Vivoni, Yi Wang, William Woodgate, Enrico A. Yepez, Junhui Zhang, Donatella Zona, and Martin Jung
Biogeosciences, 21, 5079–5115, https://doi.org/10.5194/bg-21-5079-2024, https://doi.org/10.5194/bg-21-5079-2024, 2024
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The movement of water, carbon, and energy from the Earth's surface to the atmosphere, or flux, is an important process to understand because it impacts our lives. Here, we outline a method called FLUXCOM-X to estimate global water and CO2 fluxes based on direct measurements from sites around the world. We go on to demonstrate how these new estimates of net CO2 uptake/loss, gross CO2 uptake, total water evaporation, and transpiration from plants compare to previous and independent estimates.
Luciano Emmert, Susan Trumbore, Joaquim dos Santos, Adriano Lima, Niro Higuchi, Robinson Negrón-Juárez, Cléo Dias-Júnior, Tarek El-Madany, Olaf Kolle, Gabriel Ribeiro, and Daniel Marra
EGUsphere, https://doi.org/10.5194/egusphere-2024-3234, https://doi.org/10.5194/egusphere-2024-3234, 2024
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For the first time, we documented wind gusts with the potential to damage trees in a forest in the Central Amazon. We used meteorological data collected at crown height over 24 months. We recorded 424 gusts, which occur more frequently and intensely in higher elevated areas and during the transition from the dry to the wet season. More intense rains showed the strongest relationship with extreme winds, highlighting the role of extreme events in tree mortality.
Basil Kraft, Jacob A. Nelson, Sophia Walther, Fabian Gans, Ulrich Weber, Gregory Duveiller, Markus Reichstein, Weijie Zhang, Marc Rußwurm, Devis Tuia, Marco Körner, Zayd Mahmoud Hamdi, and Martin Jung
EGUsphere, https://doi.org/10.5194/egusphere-2024-2896, https://doi.org/10.5194/egusphere-2024-2896, 2024
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Global evapotranspiration (ET) can be estimated using machine learning (ML) models optimized on local data and applied to global data. This study explores whether sequential neural networks, which consider past data, perform better than models that do not. The findings show that sequential models struggle with global upscaling, likely due to their sensitivity to data shifts from local to global scales. To improve ML-based upscaling, additional data or integration of physical knowledge is needed.
Guohua Liu, Mirco Migliavacca, Christian Reimers, Basil Kraft, Markus Reichstein, Andrew D. Richardson, Lisa Wingate, Nicolas Delpierre, Hui Yang, and Alexander J. Winkler
Geosci. Model Dev., 17, 6683–6701, https://doi.org/10.5194/gmd-17-6683-2024, https://doi.org/10.5194/gmd-17-6683-2024, 2024
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Our study employs long short-term memory (LSTM) networks to model canopy greenness and phenology, integrating meteorological memory effects. The LSTM model outperforms traditional methods, enhancing accuracy in predicting greenness dynamics and phenological transitions across plant functional types. Highlighting the importance of multi-variate meteorological memory effects, our research pioneers unlock the secrets of vegetation phenology responses to climate change with deep learning techniques.
Sung-Ching Lee, Hojin Lee, and Tin Satriawan
EGUsphere, https://doi.org/10.5194/egusphere-2024-2466, https://doi.org/10.5194/egusphere-2024-2466, 2024
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This paper reviews ecosystem-atmosphere interaction research in Asia, from the views of early career researchers. It discusses the AsiaFlux network's efforts on this topic and summarizes recent key research findings, emphasizing the importance of long-term observations and stakeholder engagement. Despite challenges like data sharing and standardized data processing, we are motivated by new research directions. The paper calls for continued collaboration to enhance our understanding.
Theertha Kariyathan, Ana Bastos, Markus Reichstein, Wouter Peters, and Julia Marshall
EGUsphere, https://doi.org/10.5194/egusphere-2024-1382, https://doi.org/10.5194/egusphere-2024-1382, 2024
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The carbon uptake period (CUP) refers to the time of the year when there is net absorption of CO2 from the atmosphere to the land. Several studies have assessed changes in CUP based on seasonal metrics from CO2 mole fraction measurements to understand the response of terrestrial biosphere to climate variations. However, we find that the CUP derived from CO2 mole fraction measurements are not likely to provide an accurate magnitude of the actual changes occurring over the surface.
Jasper M. C. Denissen, Adriaan J. Teuling, Sujan Koirala, Markus Reichstein, Gianpaolo Balsamo, Martha M. Vogel, Xin Yu, and René Orth
Earth Syst. Dynam., 15, 717–734, https://doi.org/10.5194/esd-15-717-2024, https://doi.org/10.5194/esd-15-717-2024, 2024
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Heat extremes have severe implications for human health and ecosystems. Heat extremes are mostly introduced by large-scale atmospheric circulation but can be modulated by vegetation. Vegetation with access to water uses solar energy to evaporate water into the atmosphere. Under dry conditions, water may not be available, suppressing evaporation and heating the atmosphere. Using climate projections, we show that regionally less water is available for vegetation, intensifying future heat extremes.
Sandra Raab, Karel Castro-Morales, Anke Hildebrandt, Martin Heimann, Jorien Elisabeth Vonk, Nikita Zimov, and Mathias Goeckede
Biogeosciences, 21, 2571–2597, https://doi.org/10.5194/bg-21-2571-2024, https://doi.org/10.5194/bg-21-2571-2024, 2024
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Water status is an important control factor on sustainability of Arctic permafrost soils, including production and transport of carbon. We compared a drained permafrost ecosystem with a natural control area, investigating water levels, thaw depths, and lateral water flows. We found that shifts in water levels following drainage affected soil water availability and that lateral transport patterns were of major relevance. Understanding these shifts is crucial for future carbon budget studies.
Bjorn Stevens, Stefan Adami, Tariq Ali, Hartwig Anzt, Zafer Aslan, Sabine Attinger, Jaana Bäck, Johanna Baehr, Peter Bauer, Natacha Bernier, Bob Bishop, Hendryk Bockelmann, Sandrine Bony, Guy Brasseur, David N. Bresch, Sean Breyer, Gilbert Brunet, Pier Luigi Buttigieg, Junji Cao, Christelle Castet, Yafang Cheng, Ayantika Dey Choudhury, Deborah Coen, Susanne Crewell, Atish Dabholkar, Qing Dai, Francisco Doblas-Reyes, Dale Durran, Ayoub El Gaidi, Charlie Ewen, Eleftheria Exarchou, Veronika Eyring, Florencia Falkinhoff, David Farrell, Piers M. Forster, Ariane Frassoni, Claudia Frauen, Oliver Fuhrer, Shahzad Gani, Edwin Gerber, Debra Goldfarb, Jens Grieger, Nicolas Gruber, Wilco Hazeleger, Rolf Herken, Chris Hewitt, Torsten Hoefler, Huang-Hsiung Hsu, Daniela Jacob, Alexandra Jahn, Christian Jakob, Thomas Jung, Christopher Kadow, In-Sik Kang, Sarah Kang, Karthik Kashinath, Katharina Kleinen-von Königslöw, Daniel Klocke, Uta Kloenne, Milan Klöwer, Chihiro Kodama, Stefan Kollet, Tobias Kölling, Jenni Kontkanen, Steve Kopp, Michal Koran, Markku Kulmala, Hanna Lappalainen, Fakhria Latifi, Bryan Lawrence, June Yi Lee, Quentin Lejeun, Christian Lessig, Chao Li, Thomas Lippert, Jürg Luterbacher, Pekka Manninen, Jochem Marotzke, Satoshi Matsouoka, Charlotte Merchant, Peter Messmer, Gero Michel, Kristel Michielsen, Tomoki Miyakawa, Jens Müller, Ramsha Munir, Sandeep Narayanasetti, Ousmane Ndiaye, Carlos Nobre, Achim Oberg, Riko Oki, Tuba Özkan-Haller, Tim Palmer, Stan Posey, Andreas Prein, Odessa Primus, Mike Pritchard, Julie Pullen, Dian Putrasahan, Johannes Quaas, Krishnan Raghavan, Venkatachalam Ramaswamy, Markus Rapp, Florian Rauser, Markus Reichstein, Aromar Revi, Sonakshi Saluja, Masaki Satoh, Vera Schemann, Sebastian Schemm, Christina Schnadt Poberaj, Thomas Schulthess, Cath Senior, Jagadish Shukla, Manmeet Singh, Julia Slingo, Adam Sobel, Silvina Solman, Jenna Spitzer, Philip Stier, Thomas Stocker, Sarah Strock, Hang Su, Petteri Taalas, John Taylor, Susann Tegtmeier, Georg Teutsch, Adrian Tompkins, Uwe Ulbrich, Pier-Luigi Vidale, Chien-Ming Wu, Hao Xu, Najibullah Zaki, Laure Zanna, Tianjun Zhou, and Florian Ziemen
Earth Syst. Sci. Data, 16, 2113–2122, https://doi.org/10.5194/essd-16-2113-2024, https://doi.org/10.5194/essd-16-2113-2024, 2024
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To manage Earth in the Anthropocene, new tools, new institutions, and new forms of international cooperation will be required. Earth Virtualization Engines is proposed as an international federation of centers of excellence to empower all people to respond to the immense and urgent challenges posed by climate change.
Sinikka J. Paulus, Rene Orth, Sung-Ching Lee, Anke Hildebrandt, Martin Jung, Jacob A. Nelson, Tarek Sebastian El-Madany, Arnaud Carrara, Gerardo Moreno, Matthias Mauder, Jannis Groh, Alexander Graf, Markus Reichstein, and Mirco Migliavacca
Biogeosciences, 21, 2051–2085, https://doi.org/10.5194/bg-21-2051-2024, https://doi.org/10.5194/bg-21-2051-2024, 2024
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Porous materials are known to reversibly trap water from the air, even at low humidity. However, this behavior is poorly understood for soils. In this analysis, we test whether eddy covariance is able to measure the so-called adsorption of atmospheric water vapor by soils. We find that this flux occurs frequently during dry nights in a Mediterranean ecosystem, while EC detects downwardly directed vapor fluxes. These results can help to map moisture uptake globally.
Martin Jung, Jacob Nelson, Mirco Migliavacca, Tarek El-Madany, Dario Papale, Markus Reichstein, Sophia Walther, and Thomas Wutzler
Biogeosciences, 21, 1827–1846, https://doi.org/10.5194/bg-21-1827-2024, https://doi.org/10.5194/bg-21-1827-2024, 2024
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We present a methodology to detect inconsistencies in perhaps the most important data source for measurements of ecosystem–atmosphere carbon, water, and energy fluxes. We expect that the derived consistency flags will be relevant for data users and will help in improving our understanding of and our ability to model ecosystem–climate interactions.
Gökben Demir, Andrew J. Guswa, Janett Filipzik, Johanna Clara Metzger, Christine Römermann, and Anke Hildebrandt
Hydrol. Earth Syst. Sci., 28, 1441–1461, https://doi.org/10.5194/hess-28-1441-2024, https://doi.org/10.5194/hess-28-1441-2024, 2024
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Experimental evidence is scarce to understand how the spatial variation in below-canopy precipitation affects root water uptake patterns. Here, we conducted field measurements to investigate drivers of root water uptake patterns while accounting for canopy induced heterogeneity in water input. We found that tree species interactions and soil moisture variability, rather than below-canopy precipitation patterns, control root water uptake patterns in a mixed unmanaged forest.
Samuel Upton, Markus Reichstein, Fabian Gans, Wouter Peters, Basil Kraft, and Ana Bastos
Atmos. Chem. Phys., 24, 2555–2582, https://doi.org/10.5194/acp-24-2555-2024, https://doi.org/10.5194/acp-24-2555-2024, 2024
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Data-driven eddy-covariance upscaled estimates of the global land–atmosphere net CO2 exchange (NEE) show important mismatches with regional and global estimates based on atmospheric information. To address this, we create a model with a dual constraint based on bottom-up eddy-covariance data and top-down atmospheric inversion data. Our model overcomes shortcomings of each approach, producing improved NEE estimates from local to global scale, helping to reduce uncertainty in the carbon budget.
Simone Rodrigues, Glauber Cirino, Demerval Moreira, Andrea Pozzer, Rafael Palácios, Sung-Ching Lee, Breno Imbiriba, José Nogueira, Maria Isabel Vitorino, and George Vourlitis
Biogeosciences, 21, 843–868, https://doi.org/10.5194/bg-21-843-2024, https://doi.org/10.5194/bg-21-843-2024, 2024
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The radiative effects of atmospheric particles are still unknown for a wide variety of species and types of vegetation present in Amazonian biomes. We examined the effects of aerosols on solar radiation and their impacts on photosynthesis in an area of semideciduous forest in the southern Amazon Basin. Under highly smoky-sky conditions, our results show substantial photosynthetic interruption (20–70 %), attributed specifically to the decrease in solar radiation and leaf canopy temperature.
Samuel Scherrer, Gabriëlle De Lannoy, Zdenko Heyvaert, Michel Bechtold, Clement Albergel, Tarek S. El-Madany, and Wouter Dorigo
Hydrol. Earth Syst. Sci., 27, 4087–4114, https://doi.org/10.5194/hess-27-4087-2023, https://doi.org/10.5194/hess-27-4087-2023, 2023
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We explored different options for data assimilation (DA) of the remotely sensed leaf area index (LAI). We found strong biases between LAI predicted by Noah-MP and observations. LAI DA that does not take these biases into account can induce unphysical patterns in the resulting LAI and flux estimates and leads to large changes in the climatology of root zone soil moisture. We tested two bias-correction approaches and explored alternative solutions to treating bias in LAI DA.
Richard Nair, Yunpeng Luo, Tarek El-Madany, Victor Rolo, Javier Pacheco-Labrador, Silvia Caldararu, Kendalynn A. Morris, Marion Schrumpf, Arnaud Carrara, Gerardo Moreno, Markus Reichstein, and Mirco Migliavacca
EGUsphere, https://doi.org/10.5194/egusphere-2023-2434, https://doi.org/10.5194/egusphere-2023-2434, 2023
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We studied a Mediterranean ecosystem to understand carbon uptake efficiency and its controls. These ecosystems face potential nitrogen-phosphorus imbalances due to pollution. Analysing six years of carbon data, we assessed controls at different timeframes. This is crucial for predicting such vulnerable regions. Our findings revealed N limitation on C uptake, not N:P imbalance, and strong influence of water availability. whether drought or wetness promoted net C uptake depended on timescale.
Silvia Caldararu, Victor Rolo, Benjamin D. Stocker, Teresa E. Gimeno, and Richard Nair
Biogeosciences, 20, 3637–3649, https://doi.org/10.5194/bg-20-3637-2023, https://doi.org/10.5194/bg-20-3637-2023, 2023
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Ecosystem manipulative experiments are large experiments in real ecosystems. They include processes such as species interactions and weather that would be omitted in more controlled settings. They offer a high level of realism but are underused in combination with vegetation models used to predict the response of ecosystems to global change. We propose a workflow using models and ecosystem experiments together, taking advantage of the benefits of both tools for Earth system understanding.
Christine Fischer-Bedtke, Johanna Clara Metzger, Gökben Demir, Thomas Wutzler, and Anke Hildebrandt
Hydrol. Earth Syst. Sci., 27, 2899–2918, https://doi.org/10.5194/hess-27-2899-2023, https://doi.org/10.5194/hess-27-2899-2023, 2023
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Canopies change how rain reaches the soil: some spots receive more and others less water. It has long been debated whether this also leads to locally wetter and drier soil. We checked this using measurements of canopy drip and soil moisture. We found that the increase in soil water content after rain was aligned with canopy drip. Independently, the soil storage reaction was dampened in locations prone to drainage, like hig-macroporosity areas, suggesting that canopy drip enhances bypass flow.
Theertha Kariyathan, Ana Bastos, Julia Marshall, Wouter Peters, Pieter Tans, and Markus Reichstein
Atmos. Meas. Tech., 16, 3299–3312, https://doi.org/10.5194/amt-16-3299-2023, https://doi.org/10.5194/amt-16-3299-2023, 2023
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The timing and duration of the carbon uptake period (CUP) are sensitive to the occurrence of major phenological events, which are influenced by recent climate change. This study presents an ensemble-based approach for quantifying the timing and duration of the CUP and their uncertainty when derived from atmospheric CO2 measurements with noise and gaps. The CUP metrics derived with the approach are more robust and have less uncertainty than when estimated with the conventional methods.
Hoontaek Lee, Martin Jung, Nuno Carvalhais, Tina Trautmann, Basil Kraft, Markus Reichstein, Matthias Forkel, and Sujan Koirala
Hydrol. Earth Syst. Sci., 27, 1531–1563, https://doi.org/10.5194/hess-27-1531-2023, https://doi.org/10.5194/hess-27-1531-2023, 2023
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We spatially attribute the variance in global terrestrial water storage (TWS) interannual variability (IAV) and its modeling error with two data-driven hydrological models. We find error hotspot regions that show a disproportionately large significance in the global mismatch and the association of the error regions with a smaller-scale lateral convergence of water. Our findings imply that TWS IAV modeling can be efficiently improved by focusing on model representations for the error hotspots.
Robert Vautard, Geert Jan van Oldenborgh, Rémy Bonnet, Sihan Li, Yoann Robin, Sarah Kew, Sjoukje Philip, Jean-Michel Soubeyroux, Brigitte Dubuisson, Nicolas Viovy, Markus Reichstein, Friederike Otto, and Iñaki Garcia de Cortazar-Atauri
Nat. Hazards Earth Syst. Sci., 23, 1045–1058, https://doi.org/10.5194/nhess-23-1045-2023, https://doi.org/10.5194/nhess-23-1045-2023, 2023
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A deep frost occurred in early April 2021, inducing severe damages in grapevine and fruit trees in France. We found that such extreme frosts occurring after the start of the growing season such as those of April 2021 are currently about 2°C colder [0.5 °C to 3.3 °C] in observations than in preindustrial climate. This observed intensification of growing-period frosts is attributable, at least in part, to human-caused climate change, making the 2021 event 50 % more likely [10 %–110 %].
Sinikka Jasmin Paulus, Tarek Sebastian El-Madany, René Orth, Anke Hildebrandt, Thomas Wutzler, Arnaud Carrara, Gerardo Moreno, Oscar Perez-Priego, Olaf Kolle, Markus Reichstein, and Mirco Migliavacca
Hydrol. Earth Syst. Sci., 26, 6263–6287, https://doi.org/10.5194/hess-26-6263-2022, https://doi.org/10.5194/hess-26-6263-2022, 2022
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In this study, we analyze small inputs of water to ecosystems such as fog, dew, and adsorption of vapor. To measure them, we use a scaling system and later test our attribution of different water fluxes to weight changes. We found that they occur frequently during 1 year in a dry summer ecosystem. In each season, a different flux seems dominant, but they all mainly occur during the night. Therefore, they could be important for the biosphere because rain is unevenly distributed over the year.
Na Li, Sebastian Sippel, Alexander J. Winkler, Miguel D. Mahecha, Markus Reichstein, and Ana Bastos
Earth Syst. Dynam., 13, 1505–1533, https://doi.org/10.5194/esd-13-1505-2022, https://doi.org/10.5194/esd-13-1505-2022, 2022
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Quantifying the imprint of large-scale atmospheric circulation dynamics and associated carbon cycle responses is key to improving our understanding of carbon cycle dynamics. Using a statistical model that relies on spatiotemporal sea level pressure as a proxy for large-scale atmospheric circulation, we quantify the fraction of interannual variability in atmospheric CO2 growth rate and the land CO2 sink that are driven by atmospheric circulation variability.
Melissa Ruiz-Vásquez, Sungmin O, Alexander Brenning, Randal D. Koster, Gianpaolo Balsamo, Ulrich Weber, Gabriele Arduini, Ana Bastos, Markus Reichstein, and René Orth
Earth Syst. Dynam., 13, 1451–1471, https://doi.org/10.5194/esd-13-1451-2022, https://doi.org/10.5194/esd-13-1451-2022, 2022
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Subseasonal forecasts facilitate early warning of extreme events; however their predictability sources are not fully explored. We find that global temperature forecast errors in many regions are related to climate variables such as solar radiation and precipitation, as well as land surface variables such as soil moisture and evaporative fraction. A better representation of these variables in the forecasting and data assimilation systems can support the accuracy of temperature forecasts.
Friedrich Boeing, Oldrich Rakovec, Rohini Kumar, Luis Samaniego, Martin Schrön, Anke Hildebrandt, Corinna Rebmann, Stephan Thober, Sebastian Müller, Steffen Zacharias, Heye Bogena, Katrin Schneider, Ralf Kiese, Sabine Attinger, and Andreas Marx
Hydrol. Earth Syst. Sci., 26, 5137–5161, https://doi.org/10.5194/hess-26-5137-2022, https://doi.org/10.5194/hess-26-5137-2022, 2022
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In this paper, we deliver an evaluation of the second generation operational German drought monitor (https://www.ufz.de/duerremonitor) with a state-of-the-art compilation of observed soil moisture data from 40 locations and four different measurement methods in Germany. We show that the expressed stakeholder needs for higher resolution drought information at the one-kilometer scale can be met and that the agreement of simulated and observed soil moisture dynamics can be moderately improved.
Ralf Loritz, Maoya Bassiouni, Anke Hildebrandt, Sibylle K. Hassler, and Erwin Zehe
Hydrol. Earth Syst. Sci., 26, 4757–4771, https://doi.org/10.5194/hess-26-4757-2022, https://doi.org/10.5194/hess-26-4757-2022, 2022
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In this study, we combine a deep-learning approach that predicts sap flow with a hydrological model to improve soil moisture and transpiration estimates at the catchment scale. Our results highlight that hybrid-model approaches, combining machine learning with physically based models, are a promising way to improve our ability to make hydrological predictions.
Bahar Bahrami, Anke Hildebrandt, Stephan Thober, Corinna Rebmann, Rico Fischer, Luis Samaniego, Oldrich Rakovec, and Rohini Kumar
Geosci. Model Dev., 15, 6957–6984, https://doi.org/10.5194/gmd-15-6957-2022, https://doi.org/10.5194/gmd-15-6957-2022, 2022
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Leaf area index (LAI) and gross primary productivity (GPP) are crucial components to carbon cycle, and are closely linked to water cycle in many ways. We develop a Parsimonious Canopy Model (PCM) to simulate GPP and LAI at stand scale, and show its applicability over a diverse range of deciduous broad-leaved forest biomes. With its modular structure, the PCM is able to adapt with existing data requirements, and run in either a stand-alone mode or as an interface linked to hydrologic models.
Xin Yu, René Orth, Markus Reichstein, Michael Bahn, Anne Klosterhalfen, Alexander Knohl, Franziska Koebsch, Mirco Migliavacca, Martina Mund, Jacob A. Nelson, Benjamin D. Stocker, Sophia Walther, and Ana Bastos
Biogeosciences, 19, 4315–4329, https://doi.org/10.5194/bg-19-4315-2022, https://doi.org/10.5194/bg-19-4315-2022, 2022
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Identifying drought legacy effects is challenging because they are superimposed on variability driven by climate conditions in the recovery period. We develop a residual-based approach to quantify legacies on gross primary productivity (GPP) from eddy covariance data. The GPP reduction due to legacy effects is comparable to the concurrent effects at two sites in Germany, which reveals the importance of legacy effects. Our novel methodology can be used to quantify drought legacies elsewhere.
Sophia Walther, Simon Besnard, Jacob Allen Nelson, Tarek Sebastian El-Madany, Mirco Migliavacca, Ulrich Weber, Nuno Carvalhais, Sofia Lorena Ermida, Christian Brümmer, Frederik Schrader, Anatoly Stanislavovich Prokushkin, Alexey Vasilevich Panov, and Martin Jung
Biogeosciences, 19, 2805–2840, https://doi.org/10.5194/bg-19-2805-2022, https://doi.org/10.5194/bg-19-2805-2022, 2022
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Satellite observations help interpret station measurements of local carbon, water, and energy exchange between the land surface and the atmosphere and are indispensable for simulations of the same in land surface models and their evaluation. We propose generalisable and efficient approaches to systematically ensure high quality and to estimate values in data gaps. We apply them to satellite data of surface reflectance and temperature with different resolutions at the stations.
Philip J. Ward, James Daniell, Melanie Duncan, Anna Dunne, Cédric Hananel, Stefan Hochrainer-Stigler, Annegien Tijssen, Silvia Torresan, Roxana Ciurean, Joel C. Gill, Jana Sillmann, Anaïs Couasnon, Elco Koks, Noemi Padrón-Fumero, Sharon Tatman, Marianne Tronstad Lund, Adewole Adesiyun, Jeroen C. J. H. Aerts, Alexander Alabaster, Bernard Bulder, Carlos Campillo Torres, Andrea Critto, Raúl Hernández-Martín, Marta Machado, Jaroslav Mysiak, Rene Orth, Irene Palomino Antolín, Eva-Cristina Petrescu, Markus Reichstein, Timothy Tiggeloven, Anne F. Van Loon, Hung Vuong Pham, and Marleen C. de Ruiter
Nat. Hazards Earth Syst. Sci., 22, 1487–1497, https://doi.org/10.5194/nhess-22-1487-2022, https://doi.org/10.5194/nhess-22-1487-2022, 2022
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The majority of natural-hazard risk research focuses on single hazards (a flood, a drought, a volcanic eruption, an earthquake, etc.). In the international research and policy community it is recognised that risk management could benefit from a more systemic approach. In this perspective paper, we argue for an approach that addresses multi-hazard, multi-risk management through the lens of sustainability challenges that cut across sectors, regions, and hazards.
Basil Kraft, Martin Jung, Marco Körner, Sujan Koirala, and Markus Reichstein
Hydrol. Earth Syst. Sci., 26, 1579–1614, https://doi.org/10.5194/hess-26-1579-2022, https://doi.org/10.5194/hess-26-1579-2022, 2022
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We present a physics-aware machine learning model of the global hydrological cycle. As the model uses neural networks under the hood, the simulations of the water cycle are learned from data, and yet they are informed and constrained by physical knowledge. The simulated patterns lie within the range of existing hydrological models and are plausible. The hybrid modeling approach has the potential to tackle key environmental questions from a novel perspective.
Sung-Ching Lee, Sara H. Knox, Ian McKendry, and T. Andrew Black
Atmos. Chem. Phys., 22, 2333–2349, https://doi.org/10.5194/acp-22-2333-2022, https://doi.org/10.5194/acp-22-2333-2022, 2022
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Wildfire smoke alters land–atmosphere exchange. Here, measurements in a forest and a wetland during four smoke episodes over four summers showed that impacts on radiation and heat budget were the greatest when smoke arrived in late summer. Both sites sequestered more CO2 under smoky days, partly due to diffuse light, but emitted CO2 when smoke was dense. This kind of field study is important for validating predictions of smoke–productivity feedbacks and has climate change implications.
Swamini Khurana, Falk Heße, Anke Hildebrandt, and Martin Thullner
Biogeosciences, 19, 665–688, https://doi.org/10.5194/bg-19-665-2022, https://doi.org/10.5194/bg-19-665-2022, 2022
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In this study, we concluded that the residence times of solutes and the Damköhler number (Da) of the biogeochemical reactions in the domain are governing factors for evaluating the impact of spatial heterogeneity of the domain on chemical (such as carbon and nitrogen compounds) removal. We thus proposed a relationship to scale this impact governed by Da. This relationship may be applied in larger domains, thereby resulting in more accurate modelling outcomes of nutrient removal in groundwater.
Josephin Kroll, Jasper M. C. Denissen, Mirco Migliavacca, Wantong Li, Anke Hildebrandt, and Rene Orth
Biogeosciences, 19, 477–489, https://doi.org/10.5194/bg-19-477-2022, https://doi.org/10.5194/bg-19-477-2022, 2022
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Plant growth relies on having access to energy (solar radiation) and water (soil moisture). This energy and water availability is impacted by weather extremes, like heat waves and droughts, which will occur more frequently in response to climate change. In this context, we analysed global satellite data to detect in which regions extreme plant growth is controlled by energy or water. We find that extreme plant growth is associated with temperature- or soil-moisture-related extremes.
Simon Besnard, Sujan Koirala, Maurizio Santoro, Ulrich Weber, Jacob Nelson, Jonas Gütter, Bruno Herault, Justin Kassi, Anny N'Guessan, Christopher Neigh, Benjamin Poulter, Tao Zhang, and Nuno Carvalhais
Earth Syst. Sci. Data, 13, 4881–4896, https://doi.org/10.5194/essd-13-4881-2021, https://doi.org/10.5194/essd-13-4881-2021, 2021
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Forest age can determine the capacity of a forest to uptake carbon from the atmosphere. Yet, a lack of global diagnostics that reflect the forest stage and associated disturbance regimes hampers the quantification of age-related differences in forest carbon dynamics. In this paper, we introduced a new global distribution of forest age inferred from forest inventory, remote sensing and climate data in support of a better understanding of the global dynamics in the forest water and carbon cycles.
Ana Bastos, René Orth, Markus Reichstein, Philippe Ciais, Nicolas Viovy, Sönke Zaehle, Peter Anthoni, Almut Arneth, Pierre Gentine, Emilie Joetzjer, Sebastian Lienert, Tammas Loughran, Patrick C. McGuire, Sungmin O, Julia Pongratz, and Stephen Sitch
Earth Syst. Dynam., 12, 1015–1035, https://doi.org/10.5194/esd-12-1015-2021, https://doi.org/10.5194/esd-12-1015-2021, 2021
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Temperate biomes in Europe are not prone to recurrent dry and hot conditions in summer. However, these conditions may become more frequent in the coming decades. Because stress conditions can leave legacies for many years, this may result in reduced ecosystem resilience under recurrent stress. We assess vegetation vulnerability to the hot and dry summers in 2018 and 2019 in Europe and find the important role of inter-annual legacy effects from 2018 in modulating the impacts of the 2019 event.
Rafael Poyatos, Víctor Granda, Víctor Flo, Mark A. Adams, Balázs Adorján, David Aguadé, Marcos P. M. Aidar, Scott Allen, M. Susana Alvarado-Barrientos, Kristina J. Anderson-Teixeira, Luiza Maria Aparecido, M. Altaf Arain, Ismael Aranda, Heidi Asbjornsen, Robert Baxter, Eric Beamesderfer, Z. Carter Berry, Daniel Berveiller, Bethany Blakely, Johnny Boggs, Gil Bohrer, Paul V. Bolstad, Damien Bonal, Rosvel Bracho, Patricia Brito, Jason Brodeur, Fernando Casanoves, Jérôme Chave, Hui Chen, Cesar Cisneros, Kenneth Clark, Edoardo Cremonese, Hongzhong Dang, Jorge S. David, Teresa S. David, Nicolas Delpierre, Ankur R. Desai, Frederic C. Do, Michal Dohnal, Jean-Christophe Domec, Sebinasi Dzikiti, Colin Edgar, Rebekka Eichstaedt, Tarek S. El-Madany, Jan Elbers, Cleiton B. Eller, Eugénie S. Euskirchen, Brent Ewers, Patrick Fonti, Alicia Forner, David I. Forrester, Helber C. Freitas, Marta Galvagno, Omar Garcia-Tejera, Chandra Prasad Ghimire, Teresa E. Gimeno, John Grace, André Granier, Anne Griebel, Yan Guangyu, Mark B. Gush, Paul J. Hanson, Niles J. Hasselquist, Ingo Heinrich, Virginia Hernandez-Santana, Valentine Herrmann, Teemu Hölttä, Friso Holwerda, James Irvine, Supat Isarangkool Na Ayutthaya, Paul G. Jarvis, Hubert Jochheim, Carlos A. Joly, Julia Kaplick, Hyun Seok Kim, Leif Klemedtsson, Heather Kropp, Fredrik Lagergren, Patrick Lane, Petra Lang, Andrei Lapenas, Víctor Lechuga, Minsu Lee, Christoph Leuschner, Jean-Marc Limousin, Juan Carlos Linares, Maj-Lena Linderson, Anders Lindroth, Pilar Llorens, Álvaro López-Bernal, Michael M. Loranty, Dietmar Lüttschwager, Cate Macinnis-Ng, Isabelle Maréchaux, Timothy A. Martin, Ashley Matheny, Nate McDowell, Sean McMahon, Patrick Meir, Ilona Mészáros, Mirco Migliavacca, Patrick Mitchell, Meelis Mölder, Leonardo Montagnani, Georgianne W. Moore, Ryogo Nakada, Furong Niu, Rachael H. Nolan, Richard Norby, Kimberly Novick, Walter Oberhuber, Nikolaus Obojes, A. Christopher Oishi, Rafael S. Oliveira, Ram Oren, Jean-Marc Ourcival, Teemu Paljakka, Oscar Perez-Priego, Pablo L. Peri, Richard L. Peters, Sebastian Pfautsch, William T. Pockman, Yakir Preisler, Katherine Rascher, George Robinson, Humberto Rocha, Alain Rocheteau, Alexander Röll, Bruno H. P. Rosado, Lucy Rowland, Alexey V. Rubtsov, Santiago Sabaté, Yann Salmon, Roberto L. Salomón, Elisenda Sánchez-Costa, Karina V. R. Schäfer, Bernhard Schuldt, Alexandr Shashkin, Clément Stahl, Marko Stojanović, Juan Carlos Suárez, Ge Sun, Justyna Szatniewska, Fyodor Tatarinov, Miroslav Tesař, Frank M. Thomas, Pantana Tor-ngern, Josef Urban, Fernando Valladares, Christiaan van der Tol, Ilja van Meerveld, Andrej Varlagin, Holm Voigt, Jeffrey Warren, Christiane Werner, Willy Werner, Gerhard Wieser, Lisa Wingate, Stan Wullschleger, Koong Yi, Roman Zweifel, Kathy Steppe, Maurizio Mencuccini, and Jordi Martínez-Vilalta
Earth Syst. Sci. Data, 13, 2607–2649, https://doi.org/10.5194/essd-13-2607-2021, https://doi.org/10.5194/essd-13-2607-2021, 2021
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Transpiration is a key component of global water balance, but it is poorly constrained from available observations. We present SAPFLUXNET, the first global database of tree-level transpiration from sap flow measurements, containing 202 datasets and covering a wide range of ecological conditions. SAPFLUXNET and its accompanying R software package
sapfluxnetrwill facilitate new data syntheses on the ecological factors driving water use and drought responses of trees and forests.
Christopher Krich, Mirco Migliavacca, Diego G. Miralles, Guido Kraemer, Tarek S. El-Madany, Markus Reichstein, Jakob Runge, and Miguel D. Mahecha
Biogeosciences, 18, 2379–2404, https://doi.org/10.5194/bg-18-2379-2021, https://doi.org/10.5194/bg-18-2379-2021, 2021
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Ecosystems and the atmosphere interact with each other. These interactions determine e.g. the water and carbon fluxes and thus are crucial to understand climate change effects. We analysed the interactions for many ecosystems across the globe, showing that very different ecosystems can have similar interactions with the atmosphere. Meteorological conditions seem to be the strongest interaction-shaping factor. This means that common principles can be identified to describe ecosystem behaviour.
María P. González-Dugo, Xuelong Chen, Ana Andreu, Elisabet Carpintero, Pedro J. Gómez-Giraldez, Arnaud Carrara, and Zhongbo Su
Hydrol. Earth Syst. Sci., 25, 755–768, https://doi.org/10.5194/hess-25-755-2021, https://doi.org/10.5194/hess-25-755-2021, 2021
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Drought is a devastating natural hazard and difficult to define, detect and quantify. Global meteorological data and remote-sensing products present new opportunities to characterize drought in an objective way. In this paper, we applied the surface energy balance model SEBS to estimate monthly evapotranspiration (ET) from 2001 to 2018 over the dehesa area of the Iberian Peninsula. ET anomalies were used to identify the main drought events and analyze their impacts on dehesa vegetation.
Jan Pisek, Angela Erb, Lauri Korhonen, Tobias Biermann, Arnaud Carrara, Edoardo Cremonese, Matthias Cuntz, Silvano Fares, Giacomo Gerosa, Thomas Grünwald, Niklas Hase, Michal Heliasz, Andreas Ibrom, Alexander Knohl, Johannes Kobler, Bart Kruijt, Holger Lange, Leena Leppänen, Jean-Marc Limousin, Francisco Ramon Lopez Serrano, Denis Loustau, Petr Lukeš, Lars Lundin, Riccardo Marzuoli, Meelis Mölder, Leonardo Montagnani, Johan Neirynck, Matthias Peichl, Corinna Rebmann, Eva Rubio, Margarida Santos-Reis, Crystal Schaaf, Marius Schmidt, Guillaume Simioni, Kamel Soudani, and Caroline Vincke
Biogeosciences, 18, 621–635, https://doi.org/10.5194/bg-18-621-2021, https://doi.org/10.5194/bg-18-621-2021, 2021
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Understory vegetation is the most diverse, least understood component of forests worldwide. Understory communities are important drivers of overstory succession and nutrient cycling. Multi-angle remote sensing enables us to describe surface properties by means that are not possible when using mono-angle data. Evaluated over an extensive set of forest ecosystem experimental sites in Europe, our reported method can deliver good retrievals, especially over different forest types with open canopies.
Milan Flach, Alexander Brenning, Fabian Gans, Markus Reichstein, Sebastian Sippel, and Miguel D. Mahecha
Biogeosciences, 18, 39–53, https://doi.org/10.5194/bg-18-39-2021, https://doi.org/10.5194/bg-18-39-2021, 2021
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Drought and heat events affect the uptake and sequestration of carbon in terrestrial ecosystems. We study the impact of droughts and heatwaves on the uptake of CO2 of different vegetation types at the global scale. We find that agricultural areas are generally strongly affected. Forests instead are not particularly sensitive to the events under scrutiny. This implies different water management strategies of forests but also a lack of sensitivity to remote-sensing-derived vegetation activity.
Naixin Fan, Sujan Koirala, Markus Reichstein, Martin Thurner, Valerio Avitabile, Maurizio Santoro, Bernhard Ahrens, Ulrich Weber, and Nuno Carvalhais
Earth Syst. Sci. Data, 12, 2517–2536, https://doi.org/10.5194/essd-12-2517-2020, https://doi.org/10.5194/essd-12-2517-2020, 2020
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The turnover time of terrestrial carbon (τ) controls the global carbon cycle–climate feedback. In this study, we provide a new, updated ensemble of diagnostic terrestrial carbon turnover times and associated uncertainties on a global scale. Despite the large variation in both magnitude and spatial patterns of τ, we identified robust features in the spatial patterns of τ which could contribute to uncertainty reductions in future projections of the carbon cycle–climate feedback.
B. Kraft, M. Jung, M. Körner, and M. Reichstein
Int. Arch. Photogramm. Remote Sens. Spatial Inf. Sci., XLIII-B2-2020, 1537–1544, https://doi.org/10.5194/isprs-archives-XLIII-B2-2020-1537-2020, https://doi.org/10.5194/isprs-archives-XLIII-B2-2020-1537-2020, 2020
Daniel E. Pabon-Moreno, Talie Musavi, Mirco Migliavacca, Markus Reichstein, Christine Römermann, and Miguel D. Mahecha
Biogeosciences, 17, 3991–4006, https://doi.org/10.5194/bg-17-3991-2020, https://doi.org/10.5194/bg-17-3991-2020, 2020
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Ecosystem CO2 uptake changes in time depending on climate conditions. In this study, we analyze how different climate variables affect the timing when CO2 uptake is at a maximum (DOYGPPmax). We found that the joint effects of radiation, temperature, and vapor pressure deficit are the most relevant controlling factors of DOYGPPmax and that if they increase, DOYGPPmax will happen earlier. These results help us to better understand how CO2 uptake could be affected by climate change.
Thomas Wutzler, Oscar Perez-Priego, Kendalynn Morris, Tarek S. El-Madany, and Mirco Migliavacca
Geosci. Instrum. Method. Data Syst., 9, 239–254, https://doi.org/10.5194/gi-9-239-2020, https://doi.org/10.5194/gi-9-239-2020, 2020
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Continuous data of soil CO2 efflux can improve model prediction of climate warming, and automated data are becoming increasingly available. However, aggregating chamber-based data to plot scale pose challenges. Therefore, we showed, using 1 year of half-hourly data, how using the lognormal assumption tackles several challenges. We propose that plot-scale SO2 efflux observations should be reported together with lognormally based uncertainties and enter model constraining frameworks at log scale.
René Orth, Georgia Destouni, Martin Jung, and Markus Reichstein
Biogeosciences, 17, 2647–2656, https://doi.org/10.5194/bg-17-2647-2020, https://doi.org/10.5194/bg-17-2647-2020, 2020
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Drought duration is a key control of the large-scale biospheric drought response.
Thereby, the vegetation responds linearly to drought duration at large spatial scales.
The slope of the linear relationship between the vegetation drought response and drought duration is steeper in drier climates.
Guido Kraemer, Gustau Camps-Valls, Markus Reichstein, and Miguel D. Mahecha
Biogeosciences, 17, 2397–2424, https://doi.org/10.5194/bg-17-2397-2020, https://doi.org/10.5194/bg-17-2397-2020, 2020
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To closely monitor the state of our planet, we require systems that can monitor
the observation of many different properties at the same time. We create
indicators that resemble the behavior of many different simultaneous
observations. We apply the method to create indicators representing the
Earth's biosphere. The indicators show a productivity gradient and a water
gradient. The resulting indicators can detect a large number of changes and
extremes in the Earth system.
Martin Jung, Christopher Schwalm, Mirco Migliavacca, Sophia Walther, Gustau Camps-Valls, Sujan Koirala, Peter Anthoni, Simon Besnard, Paul Bodesheim, Nuno Carvalhais, Frédéric Chevallier, Fabian Gans, Daniel S. Goll, Vanessa Haverd, Philipp Köhler, Kazuhito Ichii, Atul K. Jain, Junzhi Liu, Danica Lombardozzi, Julia E. M. S. Nabel, Jacob A. Nelson, Michael O'Sullivan, Martijn Pallandt, Dario Papale, Wouter Peters, Julia Pongratz, Christian Rödenbeck, Stephen Sitch, Gianluca Tramontana, Anthony Walker, Ulrich Weber, and Markus Reichstein
Biogeosciences, 17, 1343–1365, https://doi.org/10.5194/bg-17-1343-2020, https://doi.org/10.5194/bg-17-1343-2020, 2020
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We test the approach of producing global gridded carbon fluxes based on combining machine learning with local measurements, remote sensing and climate data. We show that we can reproduce seasonal variations in carbon assimilated by plants via photosynthesis and in ecosystem net carbon balance. The ecosystem’s mean carbon balance and carbon flux trends require cautious interpretation. The analysis paves the way for future improvements of the data-driven assessment of carbon fluxes.
Christopher Krich, Jakob Runge, Diego G. Miralles, Mirco Migliavacca, Oscar Perez-Priego, Tarek El-Madany, Arnaud Carrara, and Miguel D. Mahecha
Biogeosciences, 17, 1033–1061, https://doi.org/10.5194/bg-17-1033-2020, https://doi.org/10.5194/bg-17-1033-2020, 2020
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Causal inference promises new insight into biosphere–atmosphere interactions using time series only. To understand the behaviour of a specific method on such data, we used artificial and observation-based data. The observed structures are very interpretable and reveal certain ecosystem-specific behaviour, as only a few relevant links remain, in contrast to pure correlation techniques. Thus, causal inference allows to us gain well-constrained insights into processes and interactions.
Miguel D. Mahecha, Fabian Gans, Gunnar Brandt, Rune Christiansen, Sarah E. Cornell, Normann Fomferra, Guido Kraemer, Jonas Peters, Paul Bodesheim, Gustau Camps-Valls, Jonathan F. Donges, Wouter Dorigo, Lina M. Estupinan-Suarez, Victor H. Gutierrez-Velez, Martin Gutwin, Martin Jung, Maria C. Londoño, Diego G. Miralles, Phillip Papastefanou, and Markus Reichstein
Earth Syst. Dynam., 11, 201–234, https://doi.org/10.5194/esd-11-201-2020, https://doi.org/10.5194/esd-11-201-2020, 2020
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The ever-growing availability of data streams on different subsystems of the Earth brings unprecedented scientific opportunities. However, researching a data-rich world brings novel challenges. We present the concept of
Earth system data cubesto study the complex dynamics of multiple climate and ecosystem variables across space and time. Using a series of example studies, we highlight the potential of effectively considering the full multivariate nature of processes in the Earth system.
Nora Linscheid, Lina M. Estupinan-Suarez, Alexander Brenning, Nuno Carvalhais, Felix Cremer, Fabian Gans, Anja Rammig, Markus Reichstein, Carlos A. Sierra, and Miguel D. Mahecha
Biogeosciences, 17, 945–962, https://doi.org/10.5194/bg-17-945-2020, https://doi.org/10.5194/bg-17-945-2020, 2020
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Vegetation typically responds to variation in temperature and rainfall within days. Yet seasonal changes in meteorological conditions, as well as decadal climate variability, additionally shape the state of ecosystems. It remains unclear how vegetation responds to climate variability on these different timescales. We find that the vegetation response to climate variability depends on the timescale considered. This scale dependency should be considered for modeling land–atmosphere interactions.
Javier Pacheco-Labrador, Tarek S. El-Madany, M. Pilar Martin, Rosario Gonzalez-Cascon, Arnaud Carrara, Gerardo Moreno, Oscar Perez-Priego, Tiana Hammer, Heiko Moossen, Kathrin Henkel, Olaf Kolle, David Martini, Vicente Burchard, Christiaan van der Tol, Karl Segl, Markus Reichstein, and Mirco Migliavacca
Biogeosciences Discuss., https://doi.org/10.5194/bg-2019-501, https://doi.org/10.5194/bg-2019-501, 2020
Revised manuscript not accepted
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The new generation of sensors on-board satellites have the potential to provide richer information about the function of vegetation than before. This information, nowadays missing, is fundamental to improve our understanding and prediction of carbon and water cycles, and therefore to anticipate effects and responses to Climate Change. In this manuscript we propose a method to exploit the data provided by these satellites to successfully obtain this information key to face Climate Change.
Johanna C. Metzger, Jens Schumacher, Markus Lange, and Anke Hildebrandt
Hydrol. Earth Syst. Sci., 23, 4433–4452, https://doi.org/10.5194/hess-23-4433-2019, https://doi.org/10.5194/hess-23-4433-2019, 2019
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Variation in stemflow (rain water running down the stem) enhances the formation of flow hot spots at the forest floor. Investigating drivers based on detailed measurements, we find that forest structure affects stemflow, both for individual trees and small communities. Densely packed forest patches received more stemflow, due to a higher proportion of woody structure and canopy morphology adjustments, which increase the potential for flow path generation connecting crowns and soil.
Paul C. Stoy, Tarek S. El-Madany, Joshua B. Fisher, Pierre Gentine, Tobias Gerken, Stephen P. Good, Anne Klosterhalfen, Shuguang Liu, Diego G. Miralles, Oscar Perez-Priego, Angela J. Rigden, Todd H. Skaggs, Georg Wohlfahrt, Ray G. Anderson, A. Miriam J. Coenders-Gerrits, Martin Jung, Wouter H. Maes, Ivan Mammarella, Matthias Mauder, Mirco Migliavacca, Jacob A. Nelson, Rafael Poyatos, Markus Reichstein, Russell L. Scott, and Sebastian Wolf
Biogeosciences, 16, 3747–3775, https://doi.org/10.5194/bg-16-3747-2019, https://doi.org/10.5194/bg-16-3747-2019, 2019
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Key findings are the nearly optimal response of T to atmospheric water vapor pressure deficits across methods and scales. Additionally, the notion that T / ET intermittently approaches 1, which is a basis for many partitioning methods, does not hold for certain methods and ecosystems. To better constrain estimates of E and T from combined ET measurements, we propose a combination of independent measurement techniques to better constrain E and T at the ecosystem scale.
Vicente Burchard-Levine, Héctor Nieto, David Riaño, Mirco Migliavacca, Tarek S. El-Madany, Oscar Perez-Priego, Arnaud Carrara, and M. Pilar Martín
Hydrol. Earth Syst. Sci. Discuss., https://doi.org/10.5194/hess-2019-354, https://doi.org/10.5194/hess-2019-354, 2019
Manuscript not accepted for further review
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Models are increasingly being used to understand surface water fluxes, which are of high use to manage crop irrigation, and to understand the earth system´s response to environmental change. However, often these models have higher uncertainty in complex ecosystems with multiple layers of vegetation. This manuscript adapts and analyzes a well known model to better simulate water fluxes for a savanna-like ecosystem and to understand the influence that vegetation has on their predictions.
Sven Boese, Martin Jung, Nuno Carvalhais, Adriaan J. Teuling, and Markus Reichstein
Biogeosciences, 16, 2557–2572, https://doi.org/10.5194/bg-16-2557-2019, https://doi.org/10.5194/bg-16-2557-2019, 2019
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This study examines how limited water availability during droughts affects water-use efficiency. This metric describes how much carbon an ecosystem can assimilate for each unit of water lost by transpiration. We test how well different water-use efficiency models can capture the dynamics of transpiration decrease due to increased soil-water limitation. Accounting for the interacting effects of radiation and water limitation is necessary to accurately predict transpiration during these periods.
Richard K. F. Nair, Kendalynn A. Morris, Martin Hertel, Yunpeng Luo, Gerardo Moreno, Markus Reichstein, Marion Schrumpf, and Mirco Migliavacca
Biogeosciences, 16, 1883–1901, https://doi.org/10.5194/bg-16-1883-2019, https://doi.org/10.5194/bg-16-1883-2019, 2019
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We investigated how nutrient availability affects seasonal timing of root growth and death in a Spanish savanna, adapted to a long summer drought. We found that nitrogen (N) additions led to more root biomass but number of roots was higher with N and phosphorus together. These effects were strongly affected by the time of year. In autumn root growth occurred after leaf production. This has implications for how we understand biomass production and carbon uptake in these systems.
Xiaolu Tang, Nuno Carvalhais, Catarina Moura, Bernhard Ahrens, Sujan Koirala, Shaohui Fan, Fengying Guan, Wenjie Zhang, Sicong Gao, Vincenzo Magliulo, Pauline Buysse, Shibin Liu, Guo Chen, Wunian Yang, Zhen Yu, Jingjing Liang, Leilei Shi, Shenyan Pu, and Markus Reichstein
Biogeosciences Discuss., https://doi.org/10.5194/bg-2019-37, https://doi.org/10.5194/bg-2019-37, 2019
Preprint withdrawn
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Vegetation CUE is a key measure of carbon transfer from the atmosphere to terrestrial biomass. This study modelled global CUE with published observations using random forest. CUE varied with ecosystem types and spatially decreased with latitude, challenging the previous conclusion that CUE was independent of environmental controls. Our results emphasize a better understanding of environmental controls on CUE to reduce uncertainties in prognostic land-process model simulations.
Ian G. McKendry, Andreas Christen, Sung-Ching Lee, Madison Ferrara, Kevin B. Strawbridge, Norman O'Neill, and Andrew Black
Atmos. Chem. Phys., 19, 835–846, https://doi.org/10.5194/acp-19-835-2019, https://doi.org/10.5194/acp-19-835-2019, 2019
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Wildfire smoke in July 2015 had a significant impact on air quality, radiation, and energy budgets across British Columbia. With lighter smoke, a wetland and forested site showed enhanced photosynthetic activity (taking in carbon dioxide). However, with dense smoke the forested site became a strong source. These results suggest that smoke during the growing season potentially plays an important role in the carbon budget, and this effect will likely increase as climate changes.
Boaz Hilman, Jan Muhr, Susan E. Trumbore, Norbert Kunert, Mariah S. Carbone, Päivi Yuval, S. Joseph Wright, Gerardo Moreno, Oscar Pérez-Priego, Mirco Migliavacca, Arnaud Carrara, José M. Grünzweig, Yagil Osem, Tal Weiner, and Alon Angert
Biogeosciences, 16, 177–191, https://doi.org/10.5194/bg-16-177-2019, https://doi.org/10.5194/bg-16-177-2019, 2019
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Combined measurement of CO2 / O2 fluxes in tree stems suggested that on average 41 % of the respired CO2 was not emitted locally to the atmosphere. This finding strengthens the recognition that CO2 efflux from tree stems is not an accurate measure of respiration. The CO2 / O2 fluxes did not vary as expected if CO2 dissolution in the xylem sap was the main driver for the CO2 retention. We suggest the examination of refixation of respired CO2 as a possible mechanism for CO2 retention.
Milan Flach, Sebastian Sippel, Fabian Gans, Ana Bastos, Alexander Brenning, Markus Reichstein, and Miguel D. Mahecha
Biogeosciences, 15, 6067–6085, https://doi.org/10.5194/bg-15-6067-2018, https://doi.org/10.5194/bg-15-6067-2018, 2018
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Northern forests enhanced their productivity during and before the 2010 Russian mega heatwave. We scrutinize this issue with a novel type of multivariate extreme event detection approach. Forests compensate for 54 % of the carbon losses in agricultural ecosystems due to vulnerable conditions in spring and better water management in summer. The findings highlight the importance of forests in mitigating climate change, while not alleviating the consequences of extreme events for food security.
Thomas Wutzler, Antje Lucas-Moffat, Mirco Migliavacca, Jürgen Knauer, Kerstin Sickel, Ladislav Šigut, Olaf Menzer, and Markus Reichstein
Biogeosciences, 15, 5015–5030, https://doi.org/10.5194/bg-15-5015-2018, https://doi.org/10.5194/bg-15-5015-2018, 2018
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Net fluxes of carbon dioxide at the ecosystem level measured by eddy covariance are a main source for understanding biosphere–atmosphere interactions. However, there is a need for more usable and extensible tools for post-processing steps of the half-hourly flux data. Therefore, we developed the REddyProc package, providing data filtering, gap filling, and flux partitioning. The extensible functions are compatible with state-of-the-art tools but allow easier integration in extended analysis.
Paul Bodesheim, Martin Jung, Fabian Gans, Miguel D. Mahecha, and Markus Reichstein
Earth Syst. Sci. Data, 10, 1327–1365, https://doi.org/10.5194/essd-10-1327-2018, https://doi.org/10.5194/essd-10-1327-2018, 2018
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We provide continuous half-hourly carbon and energy fluxes for 2001 to 2014 at 0.5° spatial resolution, which allows for analyzing diurnal cycles globally. The data set contains four fluxes: gross primary production (GPP), net ecosystem exchange (NEE), latent heat (LE), and sensible heat (H). In addition, we provide a derived product that only contains monthly average diurnal cycles but which also enables us to study the important characteristics of subdaily patterns at a global scale.
Jacob A. Nelson, Nuno Carvalhais, Mirco Migliavacca, Markus Reichstein, and Martin Jung
Biogeosciences, 15, 2433–2447, https://doi.org/10.5194/bg-15-2433-2018, https://doi.org/10.5194/bg-15-2433-2018, 2018
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Plants have typical daily carbon uptake and water loss cycles. However, these cycles may change under periods of duress, such as water limitation. Here we identify two types of patterns in response to water limitations: a tendency to lose more water in the morning than afternoon and a decoupling of the carbon and water cycles. The findings show differences in responses by trees and grasses and suggest that morning shifts may be more efficient at gaining carbon per unit water used.
Jannis von Buttlar, Jakob Zscheischler, Anja Rammig, Sebastian Sippel, Markus Reichstein, Alexander Knohl, Martin Jung, Olaf Menzer, M. Altaf Arain, Nina Buchmann, Alessandro Cescatti, Damiano Gianelle, Gerard Kiely, Beverly E. Law, Vincenzo Magliulo, Hank Margolis, Harry McCaughey, Lutz Merbold, Mirco Migliavacca, Leonardo Montagnani, Walter Oechel, Marian Pavelka, Matthias Peichl, Serge Rambal, Antonio Raschi, Russell L. Scott, Francesco P. Vaccari, Eva van Gorsel, Andrej Varlagin, Georg Wohlfahrt, and Miguel D. Mahecha
Biogeosciences, 15, 1293–1318, https://doi.org/10.5194/bg-15-1293-2018, https://doi.org/10.5194/bg-15-1293-2018, 2018
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Our work systematically quantifies extreme heat and drought event impacts on gross primary productivity (GPP) and ecosystem respiration globally across a wide range of ecosystems. We show that heat extremes typically increased mainly respiration whereas drought decreased both fluxes. Combined heat and drought extremes had opposing effects offsetting each other for respiration, but there were also strong reductions in GPP and hence the strongest reductions in the ecosystems carbon sink capacity.
Jakob Zscheischler, Miguel D. Mahecha, Valerio Avitabile, Leonardo Calle, Nuno Carvalhais, Philippe Ciais, Fabian Gans, Nicolas Gruber, Jens Hartmann, Martin Herold, Kazuhito Ichii, Martin Jung, Peter Landschützer, Goulven G. Laruelle, Ronny Lauerwald, Dario Papale, Philippe Peylin, Benjamin Poulter, Deepak Ray, Pierre Regnier, Christian Rödenbeck, Rosa M. Roman-Cuesta, Christopher Schwalm, Gianluca Tramontana, Alexandra Tyukavina, Riccardo Valentini, Guido van der Werf, Tristram O. West, Julie E. Wolf, and Markus Reichstein
Biogeosciences, 14, 3685–3703, https://doi.org/10.5194/bg-14-3685-2017, https://doi.org/10.5194/bg-14-3685-2017, 2017
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Here we synthesize a wide range of global spatiotemporal observational data on carbon exchanges between the Earth surface and the atmosphere. A key challenge was to consistently combining observational products of terrestrial and aquatic surfaces. Our primary goal is to identify today’s key uncertainties and observational shortcomings that would need to be addressed in future measurement campaigns or expansions of in situ observatories.
Milan Flach, Fabian Gans, Alexander Brenning, Joachim Denzler, Markus Reichstein, Erik Rodner, Sebastian Bathiany, Paul Bodesheim, Yanira Guanche, Sebastian Sippel, and Miguel D. Mahecha
Earth Syst. Dynam., 8, 677–696, https://doi.org/10.5194/esd-8-677-2017, https://doi.org/10.5194/esd-8-677-2017, 2017
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Anomalies and extremes are often detected using univariate peak-over-threshold approaches in the geoscience community. The Earth system is highly multivariate. We compare eight multivariate anomaly detection algorithms and combinations of data preprocessing. We identify three anomaly detection algorithms that outperform univariate extreme event detection approaches. The workflows have the potential to reveal novelties in data. Remarks on their application to real Earth observations are provided.
Sven Boese, Martin Jung, Nuno Carvalhais, and Markus Reichstein
Biogeosciences, 14, 3015–3026, https://doi.org/10.5194/bg-14-3015-2017, https://doi.org/10.5194/bg-14-3015-2017, 2017
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For plants, the ratio of carbon uptake to water loss by transpiration is usually thought to depend on characteristic properties (their adaption to water scarcity) and the dryness of the atmosphere at any given moment. We show that, on the ecosystem scale, radiation has an independent effect on this ratio that had not been previously considered. When including this variable in models, predictions of transpiration improve considerably.
Nicolas Dalla Valle, Karin Potthast, Stefanie Meyer, Beate Michalzik, Anke Hildebrandt, and Thomas Wutzler
Hydrol. Earth Syst. Sci. Discuss., https://doi.org/10.5194/hess-2017-336, https://doi.org/10.5194/hess-2017-336, 2017
Manuscript not accepted for further review
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Dual permeability models are an important tool to simulate water movement in soils and can be used to assess the risk of groundwater contamination by pesticides or the risk of flooding after strong precipitation events. However, their application is often hampered by the large amount of data they require. We developed a method to run this kind of models based on mostly just soil water content measurements, which will hopefully increase their usage and improve environmental risk assessment.
Sung-Ching Lee, Andreas Christen, Andrew T. Black, Mark S. Johnson, Rachhpal S. Jassal, Rick Ketler, Zoran Nesic, and Markus Merkens
Biogeosciences, 14, 2799–2814, https://doi.org/10.5194/bg-14-2799-2017, https://doi.org/10.5194/bg-14-2799-2017, 2017
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Burns Bog in Vancouver is the largest peatland on North America's west coast. It is undergoing rewetting as a restoration management after peat harvesting. Rewetting of disturbed areas facilitates their ecological recovery but has an immediate impact on carbon dioxide and methane exchange. On the floating flux tower, we quantified annual carbon dioxide and methane exchange to inform future management. Our results suggested that the study area was a net carbon sink after 7-year rewetting.
Sebastian Sippel, Jakob Zscheischler, Miguel D. Mahecha, Rene Orth, Markus Reichstein, Martha Vogel, and Sonia I. Seneviratne
Earth Syst. Dynam., 8, 387–403, https://doi.org/10.5194/esd-8-387-2017, https://doi.org/10.5194/esd-8-387-2017, 2017
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The present study (1) evaluates land–atmosphere coupling in the CMIP5 multi-model ensemble against an ensemble of benchmarking datasets and (2) refines the model ensemble using a land–atmosphere coupling diagnostic as constraint. Our study demonstrates that a considerable fraction of coupled climate models overemphasize warm-season
moisture-limitedclimate regimes in midlatitude regions. This leads to biases in daily-scale temperature extremes, which are alleviated in a constrained ensemble.
Sebastian Sippel, Jakob Zscheischler, Martin Heimann, Holger Lange, Miguel D. Mahecha, Geert Jan van Oldenborgh, Friederike E. L. Otto, and Markus Reichstein
Hydrol. Earth Syst. Sci., 21, 441–458, https://doi.org/10.5194/hess-21-441-2017, https://doi.org/10.5194/hess-21-441-2017, 2017
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The paper re-investigates the question whether observed precipitation extremes and annual totals have been increasing in the world's dry regions over the last 60 years. Despite recently postulated increasing trends, we demonstrate that large uncertainties prevail due to (1) the choice of dryness definition and (2) statistical data processing. In fact, we find only minor (and only some significant) increases if (1) dryness is based on aridity and (2) statistical artefacts are accounted for.
Anke Hildebrandt, Axel Kleidon, and Marcel Bechmann
Hydrol. Earth Syst. Sci., 20, 3441–3454, https://doi.org/10.5194/hess-20-3441-2016, https://doi.org/10.5194/hess-20-3441-2016, 2016
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This theoretical paper describes the energy fluxes and dissipation along the flow paths involved in root water uptake, an approach that is rarely taken. We show that this provides useful additional insights for understanding the biotic and abiotic impediments to root water uptake. This approach shall be applied to explore efficient water uptake strategies and help locate the limiting processes in the complex soil–plant–atmosphere system.
Gianluca Tramontana, Martin Jung, Christopher R. Schwalm, Kazuhito Ichii, Gustau Camps-Valls, Botond Ráduly, Markus Reichstein, M. Altaf Arain, Alessandro Cescatti, Gerard Kiely, Lutz Merbold, Penelope Serrano-Ortiz, Sven Sickert, Sebastian Wolf, and Dario Papale
Biogeosciences, 13, 4291–4313, https://doi.org/10.5194/bg-13-4291-2016, https://doi.org/10.5194/bg-13-4291-2016, 2016
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We have evaluated 11 machine learning (ML) methods and two complementary drivers' setup to estimate the carbon dioxide (CO2) and energy exchanges between land ecosystems and atmosphere. Obtained results have shown high consistency among ML and high capability to estimate the spatial and seasonal variability of the target fluxes. The results were good for all the ecosystems, with limitations to the ones in the extreme environments (cold, hot) or less represented in the training data (tropics).
S. Sippel, F. E. L. Otto, M. Forkel, M. R. Allen, B. P. Guillod, M. Heimann, M. Reichstein, S. I. Seneviratne, K. Thonicke, and M. D. Mahecha
Earth Syst. Dynam., 7, 71–88, https://doi.org/10.5194/esd-7-71-2016, https://doi.org/10.5194/esd-7-71-2016, 2016
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We introduce a novel technique to bias correct climate model output for impact simulations that preserves its physical consistency and multivariate structure. The methodology considerably improves the representation of extremes in climatic variables relative to conventional bias correction strategies. Illustrative simulations of biosphere–atmosphere carbon and water fluxes with a biosphere model (LPJmL) show that the novel technique can be usefully applied to drive climate impact models.
O. Perez-Priego, J. Guan, M. Rossini, F. Fava, T. Wutzler, G. Moreno, N. Carvalhais, A. Carrara, O. Kolle, T. Julitta, M. Schrumpf, M. Reichstein, and M. Migliavacca
Biogeosciences, 12, 6351–6367, https://doi.org/10.5194/bg-12-6351-2015, https://doi.org/10.5194/bg-12-6351-2015, 2015
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Sun-induced chlorophyll fluorescence and photochemical reflectance index revealed controls of climate and nutrient availability on photosynthesis (gross primary production, GPP). Meteo-driven models (MMs) were unable to describe nutrient-induced effects on GPP. Important implications can be derived from these results, and uncertainties in the prediction of global GPP still remain when MMs do not account for plant nutrient availability.
S. Hashimoto, N. Carvalhais, A. Ito, M. Migliavacca, K. Nishina, and M. Reichstein
Biogeosciences, 12, 4121–4132, https://doi.org/10.5194/bg-12-4121-2015, https://doi.org/10.5194/bg-12-4121-2015, 2015
M. Guderle and A. Hildebrandt
Hydrol. Earth Syst. Sci., 19, 409–425, https://doi.org/10.5194/hess-19-409-2015, https://doi.org/10.5194/hess-19-409-2015, 2015
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This paper is the result of a numerical study to test the application of water balance methods for estimating evapotranspiration and water extraction profiles based on measured soil water content data. The advantage of the tested methods is that they do not rely on a priori information of any root distribution parameters. Our research shows the potential of water balance methods for derivation of water extraction profiles, but their application may be challenging in realistic conditions.
M. Bechmann, C. Schneider, A. Carminati, D. Vetterlein, S. Attinger, and A. Hildebrandt
Hydrol. Earth Syst. Sci., 18, 4189–4206, https://doi.org/10.5194/hess-18-4189-2014, https://doi.org/10.5194/hess-18-4189-2014, 2014
P. Ciais, A. J. Dolman, A. Bombelli, R. Duren, A. Peregon, P. J. Rayner, C. Miller, N. Gobron, G. Kinderman, G. Marland, N. Gruber, F. Chevallier, R. J. Andres, G. Balsamo, L. Bopp, F.-M. Bréon, G. Broquet, R. Dargaville, T. J. Battin, A. Borges, H. Bovensmann, M. Buchwitz, J. Butler, J. G. Canadell, R. B. Cook, R. DeFries, R. Engelen, K. R. Gurney, C. Heinze, M. Heimann, A. Held, M. Henry, B. Law, S. Luyssaert, J. Miller, T. Moriyama, C. Moulin, R. B. Myneni, C. Nussli, M. Obersteiner, D. Ojima, Y. Pan, J.-D. Paris, S. L. Piao, B. Poulter, S. Plummer, S. Quegan, P. Raymond, M. Reichstein, L. Rivier, C. Sabine, D. Schimel, O. Tarasova, R. Valentini, R. Wang, G. van der Werf, D. Wickland, M. Williams, and C. Zehner
Biogeosciences, 11, 3547–3602, https://doi.org/10.5194/bg-11-3547-2014, https://doi.org/10.5194/bg-11-3547-2014, 2014
X. Wu, F. Babst, P. Ciais, D. Frank, M. Reichstein, M. Wattenbach, C. Zang, and M. D. Mahecha
Biogeosciences, 11, 3057–3068, https://doi.org/10.5194/bg-11-3057-2014, https://doi.org/10.5194/bg-11-3057-2014, 2014
J. Zscheischler, M. Reichstein, S. Harmeling, A. Rammig, E. Tomelleri, and M. D. Mahecha
Biogeosciences, 11, 2909–2924, https://doi.org/10.5194/bg-11-2909-2014, https://doi.org/10.5194/bg-11-2909-2014, 2014
B. Ahrens, M. Reichstein, W. Borken, J. Muhr, S. E. Trumbore, and T. Wutzler
Biogeosciences, 11, 2147–2168, https://doi.org/10.5194/bg-11-2147-2014, https://doi.org/10.5194/bg-11-2147-2014, 2014
B. Badawy, C. Rödenbeck, M. Reichstein, N. Carvalhais, and M. Heimann
Biogeosciences, 10, 6485–6508, https://doi.org/10.5194/bg-10-6485-2013, https://doi.org/10.5194/bg-10-6485-2013, 2013
B. Mueller, M. Hirschi, C. Jimenez, P. Ciais, P. A. Dirmeyer, A. J. Dolman, J. B. Fisher, M. Jung, F. Ludwig, F. Maignan, D. G. Miralles, M. F. McCabe, M. Reichstein, J. Sheffield, K. Wang, E. F. Wood, Y. Zhang, and S. I. Seneviratne
Hydrol. Earth Syst. Sci., 17, 3707–3720, https://doi.org/10.5194/hess-17-3707-2013, https://doi.org/10.5194/hess-17-3707-2013, 2013
M. C. Braakhekke, T. Wutzler, C. Beer, J. Kattge, M. Schrumpf, B. Ahrens, I. Schöning, M. R. Hoosbeek, B. Kruijt, P. Kabat, and M. Reichstein
Biogeosciences, 10, 399–420, https://doi.org/10.5194/bg-10-399-2013, https://doi.org/10.5194/bg-10-399-2013, 2013
G. Lasslop, M. Migliavacca, G. Bohrer, M. Reichstein, M. Bahn, A. Ibrom, C. Jacobs, P. Kolari, D. Papale, T. Vesala, G. Wohlfahrt, and A. Cescatti
Biogeosciences, 9, 5243–5259, https://doi.org/10.5194/bg-9-5243-2012, https://doi.org/10.5194/bg-9-5243-2012, 2012
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Carbon sequestration potential of street tree plantings in Helsinki
Technical note: Incorporating expert domain knowledge into causal structure discovery workflows
Piaopiao Ke, Anna Lintunen, Pasi Kolari, Annalea Lohila, Santeri Tuovinen, Janne Lampilahti, Roseline Thakur, Maija Peltola, Otso Peräkylä, Tuomo Nieminen, Ekaterina Ezhova, Mari Pihlatie, Asta Laasonen, Markku Koskinen, Helena Rautakoski, Laura Heimsch, Tom Kokkonen, Aki Vähä, Ivan Mammarella, Steffen Noe, Jaana Bäck, Veli-Matti Kerminen, and Markku Kulmala
Biogeosciences, 22, 3235–3251, https://doi.org/10.5194/bg-22-3235-2025, https://doi.org/10.5194/bg-22-3235-2025, 2025
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Our research explores diverse ecosystems’ roles in climate cooling via the concept of CarbonSink+ potential. We measured CO2 uptake and local aerosol production in forests, farms, peatlands, urban gardens, and coastal areas across Finland and Estonia. The long-term data reveal that, while forests are vital with regard to CarbonSink+ potential, farms and urban gardens also play significant roles. These insights can help optimize management policy of natural resources to mitigate global warming.
Rosemary J. Eufemio, Galit Renzer, Mariah Rojas, Jolanta Miadlikowska, Todd L. Sformo, François Lutzoni, Boris A. Vinatzer, and Konrad Meister
Biogeosciences, 22, 2087–2096, https://doi.org/10.5194/bg-22-2087-2025, https://doi.org/10.5194/bg-22-2087-2025, 2025
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Biological ice nucleation plays key roles in organism survival and in shaping Earth’s atmospheric patterns. Our pan-American screening of Peltigera lichens reveals that the lichen thalli produce highly active ice nucleators (INs) resistant to freeze–thaw cycles. Notably, a pure fungal culture from Peltigera britannica released the most potent INs reported to date. Given the global abundance of these lichens, the INs may be important contributors to atmospheric processes.
Excellent O. Eboigbe, Nimelan Veerasamy, Abiodun M. Odukoya, Nnamdi C. Anene, Jeroen E. Sonke, Sayuri Sakisaka Méndez, and David S. McLagan
EGUsphere, https://doi.org/10.5194/egusphere-2025-1402, https://doi.org/10.5194/egusphere-2025-1402, 2025
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Air, soil, and three common staple crops were assess at an ASGM processing site and Hg contamination observed at a farm ≈500 m from the processing site. Of the crop tissues examined, foliage had the highest concentrations. Mercury stable isotopes indicate uptake of mercury from the air to the foliage as is the dominant uptake pathway. Using typical dietary data for Nigerians, Hg intake from these crops were below reference dose levels and generally safe for consumption.
Archana Dayalu, Marikate Mountain, Bharat Rastogi, John B. Miller, and Luciana Gatti
Biogeosciences, 22, 1509–1528, https://doi.org/10.5194/bg-22-1509-2025, https://doi.org/10.5194/bg-22-1509-2025, 2025
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The Amazon is facing unprecedented disturbance. Determining trends in Amazonia's carbon balance and its sensitivity to disturbance requires reliable vegetation models that adequately capture how its ecosystems exchange carbon with the atmosphere. Using ground- and satellite-based ecosystem products, we present an improved model of land–atmosphere vegetation carbon exchange across the Amazon. Our model agrees with independent aircraft observations from different locations.
José Ángel Callejas-Rodelas, Alexander Knohl, Ivan Mammarella, Timo Vesala, Olli Peltola, and Christian Markwitz
EGUsphere, https://doi.org/10.5194/egusphere-2025-810, https://doi.org/10.5194/egusphere-2025-810, 2025
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The spatial variability of CO2 and water vapour exchanges with the atmosphere was quantified above an agroforestry system, and further compared to a monocropping system, using a total of four eddy covariance stations. The variability of fluxes within the agroforestry was found to be as large as the variability between agroforestry and monocropping, induced by the heterogeneity of the site, which highlights the need for replicated measurements above such ecosystems.
Andrew S. Kowalski
Biogeosciences, 22, 785–789, https://doi.org/10.5194/bg-22-785-2025, https://doi.org/10.5194/bg-22-785-2025, 2025
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The laws of physics show that leaf oxygen is not photosynthetically enriched but extremely dilute due to the overwhelming effects of humidification. This challenges the prevailing diffusion-only paradigm regarding leaf gas exchanges because non-diffusive transport is required. Such transport also explains why fluxes of carbon dioxide and water vapour become decoupled at very high temperatures, as has been observed but not explained by plant physiologists.
Florian Wieland, Nadine Bothen, Ralph Schwidetzky, Teresa M. Seifried, Paul Bieber, Ulrich Pöschl, Konrad Meister, Mischa Bonn, Janine Fröhlich-Nowoisky, and Hinrich Grothe
Biogeosciences, 22, 103–115, https://doi.org/10.5194/bg-22-103-2025, https://doi.org/10.5194/bg-22-103-2025, 2025
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Betula pendula is a widespread birch tree species containing ice nucleation agents that can trigger the freezing of cloud droplets and thereby alter the evolution of clouds. Our study identifies three distinct ice-nucleating macromolecule (INM) aggregates of varying size that can nucleate ice at temperatures up to –5.4°C. Our findings suggest that these vegetation-derived particles may influence atmospheric processes, weather, and climate more strongly than previously thought.
Nicholas Cowan, Toby Roberts, Mark Hanlon, Aurelia Bezanger, Galina Toteva, Alex Tweedie, Karen Yeung, Ajinkya Deshpande, Peter Levy, Ute Skiba, Eiko Nemitz, and Julia Drewer
EGUsphere, https://doi.org/10.5194/egusphere-2024-3654, https://doi.org/10.5194/egusphere-2024-3654, 2024
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We measured soil hydrogen (H2) fluxes from two field sites, a managed grassland and a planted deciduous woodland, with flux measurements of H2 covering full seasonal cycles. We estimate annual H2 uptake of -3.1 ± 0.1 and -12.0 ± 0.4 kg H2 ha-1 yr-1 for the grassland and woodland sites, respectively. Soil moisture was found to be the primary driver of H2 uptake, with the clay content of the soils providing a physical barrier which limited H2 uptake.
Matthew G. Davis, Kevin Yan, and Jennifer G. Murphy
Biogeosciences, 21, 5381–5392, https://doi.org/10.5194/bg-21-5381-2024, https://doi.org/10.5194/bg-21-5381-2024, 2024
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Ammonia applied as fertilizer can volatilize into the atmosphere. This can threaten vulnerable ecosystems and human health. We investigated the partitioning of ammonia between an immobile adsorbed phase and mobile aqueous phase using several adsorption models. Using the Temkin model we determined that previous approaches to this issue may overestimate the quantity available for exchange by a factor of 5–20, suggesting that ammonia emissions from soil may be overestimated.
Annika Einbock and Franz Conen
Biogeosciences, 21, 5219–5231, https://doi.org/10.5194/bg-21-5219-2024, https://doi.org/10.5194/bg-21-5219-2024, 2024
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A small fraction of particles found at great heights in the atmosphere can freeze cloud droplets at temperatures of ≥ −10 °C and thus influence cloud properties. We provide a novel type of evidence that plant canopies are a major source of such biological ice-nucleating particles in the air above the Alps, potentially affecting mixed-phase cloud development.
Stephen E. Schwartz
Biogeosciences, 21, 5045–5057, https://doi.org/10.5194/bg-21-5045-2024, https://doi.org/10.5194/bg-21-5045-2024, 2024
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Anticorrelation in uptake of atmospheric CO2 following pulse emission or abrupt cessation of emissions is examined in two key model intercomparison studies. In both studies net transfer coefficients from the atmosphere to the world ocean and the terrestrial biosphere are anticorrelated across models, reducing inter-model diversity in decrease of atmospheric CO2 following the perturbation, increasing uncertainties of global warming potentials and consequences of prospective emission reductions.
Qian Li, Gil Lerner, Einat Bar, Efraim Lewinsohn, and Eran Tas
Biogeosciences, 21, 4133–4147, https://doi.org/10.5194/bg-21-4133-2024, https://doi.org/10.5194/bg-21-4133-2024, 2024
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Our research indicates that instantaneous changes in meteorological parameters better reflect drought-induced changes in the emission rates of biogenic volatile organic compounds (BVOCs) from natural vegetation than their absolute values. However, following a small amount of irrigation, this trend became more moderate or reversed, accompanied by a dramatic increase in BVOC emission rates. These findings advance our understanding of BVOC emissions under climate change.
Pia Gottschalk, Aram Kalhori, Zhan Li, Christian Wille, and Torsten Sachs
Biogeosciences, 21, 3593–3616, https://doi.org/10.5194/bg-21-3593-2024, https://doi.org/10.5194/bg-21-3593-2024, 2024
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To improve the accuracy of spatial carbon exchange estimates, we evaluated simple linear models for net ecosystem exchange (NEE) and gross primary productivity (GPP) and how they can be used to upscale the CO2 exchange of agricultural fields. The models are solely driven by Sentinel-2-derived vegetation indices (VIs). Evaluations show that different VIs have variable power to estimate NEE and GPP of crops in different years. The overall performance is as good as results from complex crop models.
Liliana Scapucci, Ankit Shekhar, Sergio Aranda-Barranco, Anastasiia Bolshakova, Lukas Hörtnagl, Mana Gharun, and Nina Buchmann
Biogeosciences, 21, 3571–3592, https://doi.org/10.5194/bg-21-3571-2024, https://doi.org/10.5194/bg-21-3571-2024, 2024
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Forests face increased exposure to “compound soil and atmospheric drought” (CSAD) events due to global warming. We examined the impacts and drivers of CO2 fluxes during CSAD events at multiple layers of a deciduous forest over 18 years. Results showed reduced net ecosystem productivity and forest-floor respiration during CSAD events, mainly driven by soil and atmospheric drought. This unpredictability in forest CO2 fluxes jeopardises reforestation projects aimed at mitigating CO2 emissions.
Tamara Emmerichs, Yen-Sen Lu, and Domenico Taraborrelli
Biogeosciences, 21, 3251–3269, https://doi.org/10.5194/bg-21-3251-2024, https://doi.org/10.5194/bg-21-3251-2024, 2024
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We assess the representation of the plant response to surface water in a global atmospheric chemistry model. This sensitivity is crucial for the return of precipitation back into the atmosphere and thus significantly impacts the representation of weather as well as air quality. The newly implemented response function reduces this process and has a better comparison with satellite observations. This yields a higher intensity of unusual warm periods and higher production of air pollutants.
Nina L. H. Kinney, Charles A. Hepburn, Matthew I. Gibson, Daniel Ballesteros, and Thomas F. Whale
Biogeosciences, 21, 3201–3214, https://doi.org/10.5194/bg-21-3201-2024, https://doi.org/10.5194/bg-21-3201-2024, 2024
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Molecules released from plant pollen induce the formation of ice from supercooled water at temperatures warm enough to suggest an underlying function for this activity. In this study we show that ice nucleators are ubiquitous in pollen. We suggest the molecules responsible fulfil some unrelated biological function and nucleate ice incidentally. The ubiquity of ice-nucleating molecules in pollen and particularly active examples reveal a greater potential for pollen to impact weather and climate.
Max Gaber, Yanghui Kang, Guy Schurgers, and Trevor Keenan
Biogeosciences, 21, 2447–2472, https://doi.org/10.5194/bg-21-2447-2024, https://doi.org/10.5194/bg-21-2447-2024, 2024
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Gross primary productivity (GPP) describes the photosynthetic carbon assimilation, which plays a vital role in the carbon cycle. We can measure GPP locally, but producing larger and continuous estimates is challenging. Here, we present an approach to extrapolate GPP to a global scale using satellite imagery and automated machine learning. We benchmark different models and predictor variables and achieve an estimate that can capture 75 % of the variation in GPP.
Sinikka J. Paulus, Rene Orth, Sung-Ching Lee, Anke Hildebrandt, Martin Jung, Jacob A. Nelson, Tarek Sebastian El-Madany, Arnaud Carrara, Gerardo Moreno, Matthias Mauder, Jannis Groh, Alexander Graf, Markus Reichstein, and Mirco Migliavacca
Biogeosciences, 21, 2051–2085, https://doi.org/10.5194/bg-21-2051-2024, https://doi.org/10.5194/bg-21-2051-2024, 2024
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Porous materials are known to reversibly trap water from the air, even at low humidity. However, this behavior is poorly understood for soils. In this analysis, we test whether eddy covariance is able to measure the so-called adsorption of atmospheric water vapor by soils. We find that this flux occurs frequently during dry nights in a Mediterranean ecosystem, while EC detects downwardly directed vapor fluxes. These results can help to map moisture uptake globally.
Luana Krebs, Susanne Burri, Iris Feigenwinter, Mana Gharun, Philip Meier, and Nina Buchmann
Biogeosciences, 21, 2005–2028, https://doi.org/10.5194/bg-21-2005-2024, https://doi.org/10.5194/bg-21-2005-2024, 2024
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This study explores year-round forest-floor greenhouse gas (GHG) fluxes in a Swiss spruce forest. Soil temperature and snow depth affected forest-floor respiration, while CH4 uptake was linked to snow cover. Negligible N2O fluxes were observed. In 2022, a warm year, CO2 emissions notably increased. The study suggests rising forest-floor GHG emissions due to climate change, impacting carbon sink behavior. Thus, for future forest management, continuous year-round GHG flux measurements are crucial.
Simone Rodrigues, Glauber Cirino, Demerval Moreira, Andrea Pozzer, Rafael Palácios, Sung-Ching Lee, Breno Imbiriba, José Nogueira, Maria Isabel Vitorino, and George Vourlitis
Biogeosciences, 21, 843–868, https://doi.org/10.5194/bg-21-843-2024, https://doi.org/10.5194/bg-21-843-2024, 2024
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The radiative effects of atmospheric particles are still unknown for a wide variety of species and types of vegetation present in Amazonian biomes. We examined the effects of aerosols on solar radiation and their impacts on photosynthesis in an area of semideciduous forest in the southern Amazon Basin. Under highly smoky-sky conditions, our results show substantial photosynthetic interruption (20–70 %), attributed specifically to the decrease in solar radiation and leaf canopy temperature.
Ruben B. Schulte, Jordi Vilà-Guerau de Arellano, Susanna Rutledge-Jonker, Shelley van der Graaf, Jun Zhang, and Margreet C. van Zanten
Biogeosciences, 21, 557–574, https://doi.org/10.5194/bg-21-557-2024, https://doi.org/10.5194/bg-21-557-2024, 2024
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We analyzed measurements with the aim of finding relations between the surface atmosphere exchange of NH3 and the CO2 uptake and transpiration by vegetation. We found a high correlation of daytime NH3 emissions with both latent heat flux and photosynthetically active radiation. Very few simultaneous measurements of NH3, CO2 fluxes and meteorological variables exist at sub-diurnal timescales. This study paves the way to finding more robust relations between the NH3 exchange flux and CO2 uptake.
Alex Mavrovic, Oliver Sonnentag, Juha Lemmetyinen, Carolina Voigt, Nick Rutter, Paul Mann, Jean-Daniel Sylvain, and Alexandre Roy
Biogeosciences, 20, 5087–5108, https://doi.org/10.5194/bg-20-5087-2023, https://doi.org/10.5194/bg-20-5087-2023, 2023
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We present an analysis of soil CO2 emissions in boreal and tundra regions during the non-growing season. We show that when the soil is completely frozen, soil temperature is the main control on CO2 emissions. When the soil is around the freezing point, with a mix of liquid water and ice, the liquid water content is the main control on CO2 emissions. This study highlights that the vegetation–snow–soil interactions must be considered to understand soil CO2 emissions during the non-growing season.
Yuhao Cui, Eri Tachibana, Kimitaka Kawamura, and Yuzo Miyazaki
Biogeosciences, 20, 4969–4980, https://doi.org/10.5194/bg-20-4969-2023, https://doi.org/10.5194/bg-20-4969-2023, 2023
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Fatty alcohols (FAs) are major components of surface lipids in plant leaves and serve as surface-active aerosols. Our study on the aerosol size distributions in a forest suggests that secondary FAs (SFAs) originated from plant waxes and that leaf senescence status is likely an important factor controlling the size distribution of SFAs. This study provides new insights into the sources of primary biological aerosol particles (PBAPs) and their effects on the aerosol ice nucleation activity.
Joyson Ahongshangbam, Liisa Kulmala, Jesse Soininen, Yasmin Frühauf, Esko Karvinen, Yann Salmon, Anna Lintunen, Anni Karvonen, and Leena Järvi
Biogeosciences, 20, 4455–4475, https://doi.org/10.5194/bg-20-4455-2023, https://doi.org/10.5194/bg-20-4455-2023, 2023
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Urban vegetation is important for removing urban CO2 emissions and cooling. We studied the response of urban trees' functions (photosynthesis and transpiration) to a heatwave and drought at four urban green areas in the city of Helsinki. We found that tree water use was increased during heatwave and drought periods, but there was no change in the photosynthesis rates. The heat and drought conditions were severe at the local scale but were not excessive enough to restrict urban trees' functions.
Ryan Vella, Andrea Pozzer, Matthew Forrest, Jos Lelieveld, Thomas Hickler, and Holger Tost
Biogeosciences, 20, 4391–4412, https://doi.org/10.5194/bg-20-4391-2023, https://doi.org/10.5194/bg-20-4391-2023, 2023
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We investigated the effect of the El Niño–Southern Oscillation (ENSO) on biogenic volatile organic compound (BVOC) emissions from plants. ENSO events can cause a significant increase in these emissions, which have a long-term impact on the Earth's atmosphere. Persistent ENSO conditions can cause long-term changes in vegetation, resulting in even higher BVOC emissions. We link ENSO-induced emission anomalies with driving atmospheric and vegetational variables.
Nadav Bekin and Nurit Agam
Biogeosciences, 20, 3791–3802, https://doi.org/10.5194/bg-20-3791-2023, https://doi.org/10.5194/bg-20-3791-2023, 2023
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The mechanisms of soil CO2 flux in dry desert soils are not fully understood. Yet studies conducted in desert ecosystems rarely discuss potential errors related to using the commonly used flux chambers in dry and bare soils. In our study, the conventional deployment practice of the chambers underestimated the instantaneous CO2 flux by up to 50 % and the total daily CO2 uptake by 35 %. This suggests that desert soils are a larger carbon sink than previously reported.
Rosemary J. Eufemio, Ingrid de Almeida Ribeiro, Todd L. Sformo, Gary A. Laursen, Valeria Molinero, Janine Fröhlich-Nowoisky, Mischa Bonn, and Konrad Meister
Biogeosciences, 20, 2805–2812, https://doi.org/10.5194/bg-20-2805-2023, https://doi.org/10.5194/bg-20-2805-2023, 2023
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Lichens, the dominant vegetation in the Arctic, contain ice nucleators (INs) that enable freezing close to 0°C. Yet the abundance, diversity, and function of lichen INs is unknown. Our screening of lichens across Alaska reveal that most species have potent INs. We find that lichens contain two IN populations which retain activity under environmentally relevant conditions. The ubiquity and stability of lichen INs suggest that they may have considerable impacts on local atmospheric patterns.
Doaa Aboelyazeed, Chonggang Xu, Forrest M. Hoffman, Jiangtao Liu, Alex W. Jones, Chris Rackauckas, Kathryn Lawson, and Chaopeng Shen
Biogeosciences, 20, 2671–2692, https://doi.org/10.5194/bg-20-2671-2023, https://doi.org/10.5194/bg-20-2671-2023, 2023
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Photosynthesis is critical for life and has been affected by the changing climate. Many parameters come into play while modeling, but traditional calibration approaches face many issues. Our framework trains coupled neural networks to provide parameters to a photosynthesis model. Using big data, we independently found parameter values that were correlated with those in the literature while giving higher correlation and reduced biases in photosynthesis rates.
Norbert Pirk, Kristoffer Aalstad, Yeliz A. Yilmaz, Astrid Vatne, Andrea L. Popp, Peter Horvath, Anders Bryn, Ane Victoria Vollsnes, Sebastian Westermann, Terje Koren Berntsen, Frode Stordal, and Lena Merete Tallaksen
Biogeosciences, 20, 2031–2047, https://doi.org/10.5194/bg-20-2031-2023, https://doi.org/10.5194/bg-20-2031-2023, 2023
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We measured the land–atmosphere exchange of CO2 and water vapor in alpine Norway over 3 years. The extremely snow-rich conditions in 2020 reduced the total annual evapotranspiration to 50 % and reduced the growing-season carbon assimilation to turn the ecosystem from a moderate annual carbon sink to an even stronger source. Our analysis suggests that snow cover anomalies are driving the most consequential short-term responses in this ecosystem’s functioning.
Hamadou Balde, Gabriel Hmimina, Yves Goulas, Gwendal Latouche, and Kamel Soudani
Biogeosciences, 20, 1473–1490, https://doi.org/10.5194/bg-20-1473-2023, https://doi.org/10.5194/bg-20-1473-2023, 2023
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This study focuses on the relationship between sun-induced chlorophyll fluorescence (SIF) and ecosystem gross primary productivity (GPP) across the ICOS European flux tower network. It shows that SIF, coupled with reflectance observations, explains over 80 % of the GPP variability across diverse ecosystems but fails to bring new information compared to reflectance alone at coarse spatial scales (~5 km). These findings have applications in agriculture and ecophysiological studies.
John T. Walker, Xi Chen, Zhiyong Wu, Donna Schwede, Ryan Daly, Aleksandra Djurkovic, A. Christopher Oishi, Eric Edgerton, Jesse Bash, Jennifer Knoepp, Melissa Puchalski, John Iiames, and Chelcy F. Miniat
Biogeosciences, 20, 971–995, https://doi.org/10.5194/bg-20-971-2023, https://doi.org/10.5194/bg-20-971-2023, 2023
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Better estimates of atmospheric nitrogen (N) deposition are needed to accurately assess ecosystem risk and impacts from deposition of nutrients and acidity. Using measurements and modeling, we estimate total N deposition of 6.7 kg N ha−1 yr−1 at a forest site in the southern Appalachian Mountains, a region sensitive to atmospheric deposition. Reductions in deposition of reduced forms of N (ammonia and ammonium) will be needed to meet the lowest estimates of N critical loads for the region.
Yi-Ying Chen and Sebastiaan Luyssaert
Biogeosciences, 20, 349–363, https://doi.org/10.5194/bg-20-349-2023, https://doi.org/10.5194/bg-20-349-2023, 2023
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Tropical cyclones are typically assumed to be associated with ecosystem damage. This study challenges this assumption and suggests that instead of reducing leaf area, cyclones in East Asia may increase leaf area by alleviating water stress.
Deborah F. McGlynn, Graham Frazier, Laura E. R. Barry, Manuel T. Lerdau, Sally E. Pusede, and Gabriel Isaacman-VanWertz
Biogeosciences, 20, 45–55, https://doi.org/10.5194/bg-20-45-2023, https://doi.org/10.5194/bg-20-45-2023, 2023
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Using a custom-made gas chromatography flame ionization detector, 2 years of speciated hourly biogenic volatile organic compound data were collected in a forest in central Virginia. We identify diurnal and seasonal variability in the data, which is shown to impact atmospheric oxidant budgets. A comparison with emission models identified discrepancies with implications for model outcomes. We suggest increased monitoring of speciated biogenic volatile organic compounds to improve modeled results.
Luke D. Schiferl, Jennifer D. Watts, Erik J. L. Larson, Kyle A. Arndt, Sébastien C. Biraud, Eugénie S. Euskirchen, Jordan P. Goodrich, John M. Henderson, Aram Kalhori, Kathryn McKain, Marikate E. Mountain, J. William Munger, Walter C. Oechel, Colm Sweeney, Yonghong Yi, Donatella Zona, and Róisín Commane
Biogeosciences, 19, 5953–5972, https://doi.org/10.5194/bg-19-5953-2022, https://doi.org/10.5194/bg-19-5953-2022, 2022
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As the Arctic rapidly warms, vast stores of thawing permafrost could release carbon dioxide (CO2) into the atmosphere. We combined observations of atmospheric CO2 concentrations from aircraft and a tower with observed CO2 fluxes from tundra ecosystems and found that the Alaskan North Slope in not a consistent source nor sink of CO2. Our study shows the importance of using both site-level and atmospheric measurements to constrain regional net CO2 fluxes and improve biogenic processes in models.
Pascal Wintjen, Frederik Schrader, Martijn Schaap, Burkhard Beudert, Richard Kranenburg, and Christian Brümmer
Biogeosciences, 19, 5287–5311, https://doi.org/10.5194/bg-19-5287-2022, https://doi.org/10.5194/bg-19-5287-2022, 2022
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For the first time, we compared four methods for estimating the annual dry deposition of total reactive nitrogen into a low-polluted forest ecosystem. In our analysis, we used 2.5 years of flux measurements, an in situ modeling approach, a large-scale chemical transport model (CTM), and canopy budget models. Annual nitrogen dry deposition budgets ranged between 4.3 and 6.7 kg N ha−1 a−1, depending on the applied method.
Michael Staudt, Juliane Daussy, Joseph Ingabire, and Nafissa Dehimeche
Biogeosciences, 19, 4945–4963, https://doi.org/10.5194/bg-19-4945-2022, https://doi.org/10.5194/bg-19-4945-2022, 2022
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We studied the short- and long-term effects of CO2 as a function of temperature on monoterpene emissions from holm oak. Similarly to isoprene, emissions decreased non-linearly with increasing CO2, with no differences among compounds and chemotypes. The CO2 response was modulated by actual leaf and growth temperature but not by growth CO2. Estimates of annual monoterpene release under double CO2 suggest that CO2 inhibition does not offset the increase in emissions due to expected warming.
Brendan Byrne, Junjie Liu, Yonghong Yi, Abhishek Chatterjee, Sourish Basu, Rui Cheng, Russell Doughty, Frédéric Chevallier, Kevin W. Bowman, Nicholas C. Parazoo, David Crisp, Xing Li, Jingfeng Xiao, Stephen Sitch, Bertrand Guenet, Feng Deng, Matthew S. Johnson, Sajeev Philip, Patrick C. McGuire, and Charles E. Miller
Biogeosciences, 19, 4779–4799, https://doi.org/10.5194/bg-19-4779-2022, https://doi.org/10.5194/bg-19-4779-2022, 2022
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Plants draw CO2 from the atmosphere during the growing season, while respiration releases CO2 to the atmosphere throughout the year, driving seasonal variations in atmospheric CO2 that can be observed by satellites, such as the Orbiting Carbon Observatory 2 (OCO-2). Using OCO-2 XCO2 data and space-based constraints on plant growth, we show that permafrost-rich northeast Eurasia has a strong seasonal release of CO2 during the autumn, hinting at an unexpectedly large respiration signal from soils.
Valery A. Isidorov and Andrej A. Zaitsev
Biogeosciences, 19, 4715–4746, https://doi.org/10.5194/bg-19-4715-2022, https://doi.org/10.5194/bg-19-4715-2022, 2022
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Biogenic volatile organic compounds (VOCs) play a critical role in earth-system processes: they are
main playersin the formation of tropospheric O3 and secondary aerosols, which have a significant impact on climate, human health and crops. A complex mixture of VOCs, formed as a result of physicochemical and biological processes, is released into the atmosphere from the forest floor. This review presents data on the composition of VOCs and contribution of various processes to their emissions.
David S. McLagan, Harald Biester, Tomas Navrátil, Stephan M. Kraemer, and Lorenz Schwab
Biogeosciences, 19, 4415–4429, https://doi.org/10.5194/bg-19-4415-2022, https://doi.org/10.5194/bg-19-4415-2022, 2022
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Spruce and larch trees are effective archiving species for historical atmospheric mercury using growth rings of bole wood. Mercury stable isotope analysis proved an effective tool to characterise industrial mercury signals and assess mercury uptake pathways (leaf uptake for both wood and bark) and mercury cycling within the trees. These data detail important information for understanding the mercury biogeochemical cycle particularly in forest systems.
Xin Yu, René Orth, Markus Reichstein, Michael Bahn, Anne Klosterhalfen, Alexander Knohl, Franziska Koebsch, Mirco Migliavacca, Martina Mund, Jacob A. Nelson, Benjamin D. Stocker, Sophia Walther, and Ana Bastos
Biogeosciences, 19, 4315–4329, https://doi.org/10.5194/bg-19-4315-2022, https://doi.org/10.5194/bg-19-4315-2022, 2022
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Identifying drought legacy effects is challenging because they are superimposed on variability driven by climate conditions in the recovery period. We develop a residual-based approach to quantify legacies on gross primary productivity (GPP) from eddy covariance data. The GPP reduction due to legacy effects is comparable to the concurrent effects at two sites in Germany, which reveals the importance of legacy effects. Our novel methodology can be used to quantify drought legacies elsewhere.
Anders Lindroth, Norbert Pirk, Ingibjörg S. Jónsdóttir, Christian Stiegler, Leif Klemedtsson, and Mats B. Nilsson
Biogeosciences, 19, 3921–3934, https://doi.org/10.5194/bg-19-3921-2022, https://doi.org/10.5194/bg-19-3921-2022, 2022
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We measured the fluxes of carbon dioxide and methane between a moist moss tundra and the atmosphere on Svalbard in order to better understand how such ecosystems are affecting the climate and vice versa. We found that the system was a small sink of carbon dioxide and a small source of methane. These fluxes are small in comparison with other tundra ecosystems in the high Arctic. Analysis of temperature sensitivity showed that respiration was more sensitive than photosynthesis above about 6 ℃.
Phillip Papastefanou, Christian S. Zang, Zlatan Angelov, Aline Anderson de Castro, Juan Carlos Jimenez, Luiz Felipe Campos De Rezende, Romina C. Ruscica, Boris Sakschewski, Anna A. Sörensson, Kirsten Thonicke, Carolina Vera, Nicolas Viovy, Celso Von Randow, and Anja Rammig
Biogeosciences, 19, 3843–3861, https://doi.org/10.5194/bg-19-3843-2022, https://doi.org/10.5194/bg-19-3843-2022, 2022
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The Amazon rainforest has been hit by multiple severe drought events. In this study, we assess the severity and spatial extent of the extreme drought years 2005, 2010 and 2015/16 in the Amazon. Using nine different precipitation datasets and three drought indicators we find large differences in drought stress across the Amazon region. We conclude that future studies should use multiple rainfall datasets and drought indicators when estimating the impact of drought stress in the Amazon region.
Haiyang Shi, Geping Luo, Olaf Hellwich, Mingjuan Xie, Chen Zhang, Yu Zhang, Yuangang Wang, Xiuliang Yuan, Xiaofei Ma, Wenqiang Zhang, Alishir Kurban, Philippe De Maeyer, and Tim Van de Voorde
Biogeosciences, 19, 3739–3756, https://doi.org/10.5194/bg-19-3739-2022, https://doi.org/10.5194/bg-19-3739-2022, 2022
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A number of studies have been conducted by using machine learning approaches to simulate carbon fluxes. We performed a meta-analysis of these net ecosystem exchange (NEE) simulations. Random forests and support vector machines performed better than other algorithms. Models with larger timescales had a lower accuracy. For different plant functional types (PFTs), there were significant differences in the predictors used and their effects on model accuracy.
Siqi Li, Wei Zhang, Xunhua Zheng, Yong Li, Shenghui Han, Rui Wang, Kai Wang, Zhisheng Yao, Chunyan Liu, and Chong Zhang
Biogeosciences, 19, 3001–3019, https://doi.org/10.5194/bg-19-3001-2022, https://doi.org/10.5194/bg-19-3001-2022, 2022
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The CNMM–DNDC model was modified to simulate ammonia volatilization (AV) from croplands. AV from cultivated uplands followed the first-order kinetics, which was jointly regulated by the factors of soil properties and meteorological conditions. AV simulation from rice paddy fields was improved by incorporating Jayaweera–Mikkelsen mechanisms. The modified model performed well in simulating the observed cumulative AV measured from 63 fertilization events in China.
Matthias Volk, Matthias Suter, Anne-Lena Wahl, and Seraina Bassin
Biogeosciences, 19, 2921–2937, https://doi.org/10.5194/bg-19-2921-2022, https://doi.org/10.5194/bg-19-2921-2022, 2022
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Because soils are an important sink for greenhouse gasses, we subjected sub-alpine grassland to a six-level climate change treatment.
Two independent methods showed that at warming > 1.5 °C the grassland ecosystem lost ca. 14 % or ca. 1 kg C m−2 in 5 years.
This shrinking of the terrestrial C sink implies a substantial positive feedback to the atmospheric greenhouse effect.
It is likely that this dramatic C loss is a transient effect before a new, climate-adjusted steady state is reached.
Johan A. Eckdahl, Jeppe A. Kristensen, and Daniel B. Metcalfe
Biogeosciences, 19, 2487–2506, https://doi.org/10.5194/bg-19-2487-2022, https://doi.org/10.5194/bg-19-2487-2022, 2022
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This study found climate to be a driving force for increasing per area emissions of greenhouse gases and removal of important nutrients from high-latitude forests due to wildfire. It used detailed direct measurements over a large area to uncover patterns and mechanisms of restructuring of forest carbon and nitrogen pools that are extrapolatable to larger regions. It also takes a step forward in filling gaps in global knowledge of northern forest response to climate-change-strengthened wildfires.
Sparkle L. Malone, Youmi Oh, Kyle A. Arndt, George Burba, Roisin Commane, Alexandra R. Contosta, Jordan P. Goodrich, Henry W. Loescher, Gregory Starr, and Ruth K. Varner
Biogeosciences, 19, 2507–2522, https://doi.org/10.5194/bg-19-2507-2022, https://doi.org/10.5194/bg-19-2507-2022, 2022
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To understand the CH4 flux potential of natural ecosystems and agricultural lands in the United States of America, a multi-scale CH4 observation network focused on CH4 flux rates, processes, and scaling methods is required. This can be achieved with a network of ground-based observations that are distributed based on climatic regions and land cover.
Bruna R. F. Oliveira, Jan J. Keizer, and Thomas Foken
Biogeosciences, 19, 2235–2243, https://doi.org/10.5194/bg-19-2235-2022, https://doi.org/10.5194/bg-19-2235-2022, 2022
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This study analyzes the impacts of this windthrow on the aerodynamic characteristics of zero-plane displacement and roughness length and, ultimately, their implications for the turbulent fluxes. The turbulent fluxes were only affected to a minor degree by the windthrow, but the footprint area of the flux tower changed markedly so that the target area of the measurements had to be redetermined.
Minttu Havu, Liisa Kulmala, Pasi Kolari, Timo Vesala, Anu Riikonen, and Leena Järvi
Biogeosciences, 19, 2121–2143, https://doi.org/10.5194/bg-19-2121-2022, https://doi.org/10.5194/bg-19-2121-2022, 2022
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The carbon sequestration potential of two street tree species and the soil beneath them was quantified with the urban land surface model SUEWS and the soil carbon model Yasso. The street tree plantings turned into a modest sink of carbon from the atmosphere after 14 years. Overall, the results indicate the importance of soil in urban carbon sequestration estimations, as soil respiration exceeded the carbon uptake in the early phase, due to the high initial carbon loss from the soil.
Jarmo Mäkelä, Laila Melkas, Ivan Mammarella, Tuomo Nieminen, Suyog Chandramouli, Rafael Savvides, and Kai Puolamäki
Biogeosciences, 19, 2095–2099, https://doi.org/10.5194/bg-19-2095-2022, https://doi.org/10.5194/bg-19-2095-2022, 2022
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Causal structure discovery algorithms have been making headway into Earth system sciences, and they can be used to increase our understanding on biosphere–atmosphere interactions. In this paper we present a procedure on how to utilize prior knowledge of the domain experts together with these algorithms in order to find more robust causal structure models. We also demonstrate how to avoid pitfalls such as over-fitting and concept drift during this process.
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Short summary
Semi-arid ecosystems are crucial for Earth's carbon balance and are sensitive to changes in nitrogen (N) and phosphorus (P) levels. Their carbon dynamics are complex and not fully understood. We studied how long-term nutrient changes affect carbon exchange. In summer, the addition of N+P changed plant composition and productivity. In transitional seasons, carbon exchange was less weather-dependent with N. The addition of N and N+P increases carbon-exchange variability, driven by grass greenness.
Semi-arid ecosystems are crucial for Earth's carbon balance and are sensitive to changes in...
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