Articles | Volume 13, issue 2
https://doi.org/10.5194/bg-13-567-2016
© Author(s) 2016. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
https://doi.org/10.5194/bg-13-567-2016
© Author(s) 2016. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
Research article
| 
02 Feb 2016
Research article |
| 02 Feb 2016
The nature of organic carbon in density-fractionated sediments in the Sacramento-San Joaquin River Delta (California)
S. G. Wakeham
CORRESPONDING AUTHOR
Skidaway Institute of Oceanography, The University of Georgia, 10
Ocean Science Circle, Savannah, GA 31411, USA
E. A. Canuel
Virginia Institute of Marine Science, College of William and
Mary, P.O. Box 1346, Gloucester Point, VA 23062, USA
Related subject area
Biogeochemistry: Limnology
Contrasting activation energies of litter-associated respiration and P uptake drive lower cumulative P uptake at higher temperatures
Rapidly increasing sulfate concentration: a hidden promoter of eutrophication in shallow lakes
The dominant role of sunlight in degrading winter dissolved organic matter from a thermokarst lake in a subarctic peatland
Endogenic methylmercury in a eutrophic lake during the formation and decay of seston
Dissolved organic matter signatures in urban surface waters: spatio-temporal patterns and drivers
Towards a history of Holocene P dynamics for the Northern Hemisphere using lake sediment geochemical records
Methane in the Danube Delta: the importance of spatial patterns and diel cycles for atmospheric emission estimates
Methane oxidation in the waters of a humic-rich boreal lake stimulated by photosynthesis, nitrite, Fe(III) and humics
Porewater δ13CDOC indicates variable extent of degradation in different talik layers of coastal Alaskan thermokarst lakes
Holocene phototrophic community and anoxia dynamics in meromictic Lake Jaczno (NE Poland) using high-resolution hyperspectral imaging and HPLC data
Changing sources and processes sustaining surface CO2 and CH4 fluxes along a tropical river to reservoir system
The relative importance of photodegradation and biodegradation of terrestrially derived dissolved organic carbon across four lakes of differing trophic status
The influences of historic lake trophy and mixing regime changes on long-term phosphorus fraction retention in sediments of deep eutrophic lakes: a case study from Lake Burgäschi, Switzerland
Ice formation on lake surfaces in winter causes warm-season bias of lacustrine brGDGT temperature estimates
Drivers of diffusive CH4 emissions from shallow subarctic lakes on daily to multi-year timescales
High organic carbon burial but high potential for methane ebullition in the sediments of an Amazonian hydroelectric reservoir
Direct O2 control on the partitioning between denitrification and dissimilatory nitrate reduction to ammonium in lake sediments
Spatial distribution of environmental indicators in surface sediments of Lake Bolshoe Toko, Yakutia, Russia
Ostracods as ecological and isotopic indicators of lake water salinity changes: the Lake Van example
Reviews and syntheses: Dams, water quality and tropical reservoir stratification
Nitrogen cycling in Sandusky Bay, Lake Erie: oscillations between strong and weak export and implications for harmful algal blooms
Distinctive effects of allochthonous and autochthonous organic matter on CDOM spectra in a tropical lake
High-frequency productivity estimates for a lake from free-water CO2 concentration measurements
Nitrification and ammonium dynamics in Taihu Lake, China: seasonal competition for ammonium between nitrifiers and cyanobacteria
Quality transformation of dissolved organic carbon during water transit through lakes: contrasting controls by photochemical and biological processes
Continuous measurement of air–water gas exchange by underwater eddy covariance
Capturing temporal and spatial variability in the chemistry of shallow permafrost ponds
Organic carbon mass accumulation rate regulates the flux of reduced substances from the sediments of deep lakes
Cyanobacterial carbon concentrating mechanisms facilitate sustained CO2 depletion in eutrophic lakes
New insights on resource stoichiometry: assessing availability of carbon, nitrogen, and phosphorus to bacterioplankton
Spatio-seasonal variability of chromophoric dissolved organic matter absorption and responses to photobleaching in a large shallow temperate lake
Isotopic composition of nitrate and particulate organic matter in a pristine dam reservoir of western India: implications for biogeochemical processes
Bacterial production in subarctic peatland lakes enriched by thawing permafrost
Photochemical mineralisation in a boreal brown water lake: considerable temporal variability and minor contribution to carbon dioxide production
Are flood-driven turbidity currents hot spots for priming effect in lakes?
Organic carbon burial efficiency in a subtropical hydroelectric reservoir
Importance of within-lake processes in affecting the dynamics of dissolved organic carbon and dissolved organic and inorganic nitrogen in an Adirondack forested lake/watershed
Temperature dependence of the relationship between pCO2 and dissolved organic carbon in lakes
Microbial nutrient limitation in Arctic lakes in a permafrost landscape of southwest Greenland
Phototrophic pigment diversity and picophytoplankton in permafrost thaw lakes
Carbon dynamics in highly heterotrophic subarctic thaw ponds
Impact of forest harvesting on water quality and fluorescence characteristics of dissolved organic matter in eastern Canadian Boreal Shield lakes in summer
Spatial distribution and sources of organic carbon in the surface sediment of Bosten Lake, China
Human land uses enhance sediment denitrification and N2O production in Yangtze lakes primarily by influencing lake water quality
Thermal processes of thermokarst lakes in the continuous permafrost zone of northern Siberia – observations and modeling (Lena River Delta, Siberia)
Biogeochemistry of a large and deep tropical lake (Lake Kivu, East Africa: insights from a stable isotope study covering an annual cycle
Thermokarst lake methanogenesis along a complete talik profile
Seasonal dynamics of organic carbon and metals in thermokarst lakes from the discontinuous permafrost zone of western Siberia
Methanotrophy within the water column of a large meromictic tropical lake (Lake Kivu, East Africa)
The effects of river inflow and retention time on the spatial heterogeneity of chlorophyll and water–air CO2 fluxes in a tropical hydropower reservoir
Nathan J. Tomczyk, Amy D. Rosemond, Anna Kaz, and Jonathan P. Benstead
Biogeosciences, 20, 191–204, https://doi.org/10.5194/bg-20-191-2023, https://doi.org/10.5194/bg-20-191-2023, 2023
Short summary
Short summary
Warming is expected to increase rates of microbial metabolism, but the effect of warming on nutrient demand is unclear. Our experiments demonstrate that microbial nutrient uptake increases less with temperature than metabolism, particularly when environmental nutrient concentrations are low. However, our simulation models suggest that warming may actually lead to declines in ecosystem-scale nutrient uptake as warming accelerates the depletion of carbon substrates required for microbial growth.
Chuanqiao Zhou, Yu Peng, Li Chen, Miaotong Yu, Muchun Zhou, Runze Xu, Lanqing Zhang, Siyuan Zhang, Xiaoguang Xu, Limin Zhang, and Guoxiang Wang
Biogeosciences, 19, 4351–4360, https://doi.org/10.5194/bg-19-4351-2022, https://doi.org/10.5194/bg-19-4351-2022, 2022
Short summary
Short summary
The dramatical increase in SO42- concentration up to 100 mg L-1 in eutrophic lakes has aroused great attention. It enhanced the sulfate reduction to release a large amount of ΣS2- during cyanobacteria decomposition. The Fe2+ released from the iron reduction process is captured by ΣS2-, and finally the combination of iron and P was reduced, promoting the release of endogenous P. Therefore, increasing sulfate concentrations are shown to be a hidden promoter of eutrophication in shallow lakes.
Flora Mazoyer, Isabelle Laurion, and Milla Rautio
Biogeosciences, 19, 3959–3977, https://doi.org/10.5194/bg-19-3959-2022, https://doi.org/10.5194/bg-19-3959-2022, 2022
Short summary
Short summary
Dissolved organic matter collected at the end of winter from a peatland thermokarst lake was highly transformed and degraded by sunlight, leading to bacterial stimulation and CO2 production, but a fraction was also potentially lost by photoflocculation. Over 18 days, 18 % of the incubated dissolved organic matter was lost under sunlight, while dark bacterial degradation was negligible. Sunlight could have a marked effect on carbon cycling in organic-rich thermokarst lakes after ice-off.
Laura Balzer, Carluvy Baptista-Salazar, Sofi Jonsson, and Harald Biester
Biogeosciences Discuss., https://doi.org/10.5194/bg-2022-170, https://doi.org/10.5194/bg-2022-170, 2022
Revised manuscript accepted for BG
Short summary
Short summary
Toxic methylmercury (MeHg) in lakes can be enriched in fish and is harmful for humans. Phytoplankton is the entry point for MeHg into the aquatic food chain. We investigated seasonal MeHg concentrations in plankton of a productive lake. Our results show that high amounts of MeHg is occurring in algae and suspended matter in lakes and that productive lakes are hot spots of MeHg formation mainly controlled by decomposition of algae organic matter and water phase redox conditions.
Clara Romero González-Quijano, Sonia Herrero Ortega, Peter Casper, Mark O. Gessner, and Gabriel A. Singer
Biogeosciences, 19, 2841–2853, https://doi.org/10.5194/bg-19-2841-2022, https://doi.org/10.5194/bg-19-2841-2022, 2022
Short summary
Short summary
Despite today's diversity of methods to measure dissolved organic matter (DOM), its potential to give ecological information about urban surface waters has been underused. We found DOM from urban lakes and ponds to differ greatly from that of urban streams and rivers in composition as well as temporal turnover. Urban land use (the percentage of green space), nutrient supply and point source pollution were the principal drivers of DOM. We suggest including DOM composition in regular monitoring.
Madeleine Moyle, John F. Boyle, and Richard C. Chiverrell
Biogeosciences, 18, 5609–5638, https://doi.org/10.5194/bg-18-5609-2021, https://doi.org/10.5194/bg-18-5609-2021, 2021
Short summary
Short summary
We reconstruct Holocene landscape P yield and lake water TP concentration for 24 sites across the Northern Hemisphere by applying a process model to published lake sediment geochemical records. We find sites with the same landscape development history show similar geochemical profiles depending on climate, human impact, and other local factors. Our reconstructions can be used to understand present-day terrestrial P cycling, lake water nutrient status, and export of terrestrial P to the oceans.
Anna Canning, Bernhard Wehrli, and Arne Körtzinger
Biogeosciences, 18, 3961–3979, https://doi.org/10.5194/bg-18-3961-2021, https://doi.org/10.5194/bg-18-3961-2021, 2021
Short summary
Short summary
Inland waters are usually not well restrained in terms of greenhouse gas measurements. One of these regions is the Danube Delta, Romania. Therefore, we measured continuously with sensors to collect high-resolution data for CH4 and O2 throughout the Delta. We found significant variation for all concentrations over the day and night and between regions, as well as large spatial variation throughout all regions, with large CH4 concentrations flowing in from the reed beds to the lakes.
Sigrid van Grinsven, Kirsten Oswald, Bernhard Wehrli, Corinne Jegge, Jakob Zopfi, Moritz F. Lehmann, and Carsten J. Schubert
Biogeosciences, 18, 3087–3101, https://doi.org/10.5194/bg-18-3087-2021, https://doi.org/10.5194/bg-18-3087-2021, 2021
Short summary
Short summary
Lake Lovojärvi is a nutrient-rich lake with high amounts of methane at the bottom, but little near the top. Methane comes from the sediment and rises up through the water but is consumed by microorganisms along the way. They use oxygen if available, but in deeper water layers, no oxygen was present. There, nitrite, iron and humic substances were used, besides a collaboration between photosynthetic organisms and methane consumers, in which the first produced oxygen for the latter.
Ove H. Meisel, Joshua F. Dean, Jorien E. Vonk, Lukas Wacker, Gert-Jan Reichart, and Han Dolman
Biogeosciences, 18, 2241–2258, https://doi.org/10.5194/bg-18-2241-2021, https://doi.org/10.5194/bg-18-2241-2021, 2021
Short summary
Short summary
Arctic permafrost lakes form thaw bulbs of unfrozen soil (taliks) beneath them where carbon degradation and greenhouse gas production are increased. We analyzed the stable carbon isotopes of Alaskan talik sediments and their porewater dissolved organic carbon and found that the top layers of these taliks are likely more actively degraded than the deeper layers. This in turn implies that these top layers are likely also more potent greenhouse gas producers than the underlying deeper layers.
Stamatina Makri, Andrea Lami, Luyao Tu, Wojciech Tylmann, Hendrik Vogel, and Martin Grosjean
Biogeosciences, 18, 1839–1856, https://doi.org/10.5194/bg-18-1839-2021, https://doi.org/10.5194/bg-18-1839-2021, 2021
Short summary
Short summary
Anoxia in lakes is a major growing concern. In this study we applied a multiproxy approach combining high-resolution hyperspectral imaging (HSI) pigment data with specific HPLC data to examine the Holocene evolution and main drivers of lake anoxia and trophic state changes. We find that when human impact was low, these changes were driven by climate and natural lake-catchment evolution. In the last 500 years, increasing human impact has promoted lake eutrophication and permanent anoxia.
Cynthia Soued and Yves T. Prairie
Biogeosciences, 18, 1333–1350, https://doi.org/10.5194/bg-18-1333-2021, https://doi.org/10.5194/bg-18-1333-2021, 2021
Short summary
Short summary
Freshwater reservoirs emit greenhouse gases (GHGs, CO2 and CH4) to the atmosphere; however, the sources underlying these emissions are numerous, and their magnitude is not well known. This study quantifies surface CO2 and CH4 emissions and all their potential sources in a tropical reservoir. Results highlight the changes in GHG sources along the river–reservoir continuum, with internal metabolism being a key component but highly uncertain and challenging to estimate at an ecosystem scale.
Christopher M. Dempsey, Jennifer A. Brentrup, Sarah Magyan, Lesley B. Knoll, Hilary M. Swain, Evelyn E. Gaiser, Donald P. Morris, Michael T. Ganger, and Craig E. Williamson
Biogeosciences, 17, 6327–6340, https://doi.org/10.5194/bg-17-6327-2020, https://doi.org/10.5194/bg-17-6327-2020, 2020
Short summary
Short summary
We looked at how terrestrial dissolved organic carbon (DOC) from the watersheds of four different lakes responded to both biodegradation (i.e., microbes) and photodegradation (i.e., sunlight). The traditional paradigm is that biodegradation is more important than photodegradation. Our research shows that, on short timescales (i.e., 7 d), sunlight is more important than microbes in degrading DOC. Interestingly, the lakes had different responses to sunlight based on their trophic status.
Luyao Tu, Paul Zander, Sönke Szidat, Ronald Lloren, and Martin Grosjean
Biogeosciences, 17, 2715–2729, https://doi.org/10.5194/bg-17-2715-2020, https://doi.org/10.5194/bg-17-2715-2020, 2020
Short summary
Short summary
In a small, deep lake on the Swiss Plateau, net fluxes of labile P fractions in sediments that can be released to surface waters have been predominately controlled by past hypolimnetic anoxic conditions since the early 1900s. More than 40 years of hypolimnetic withdrawal can effectively reduce net P fluxes in sediments and internal P loads but not effectively decrease eutrophication. These findings should likely serve the management of deep eutrophic lakes in temperate zones.
Jiantao Cao, Zhiguo Rao, Fuxi Shi, and Guodong Jia
Biogeosciences, 17, 2521–2536, https://doi.org/10.5194/bg-17-2521-2020, https://doi.org/10.5194/bg-17-2521-2020, 2020
Short summary
Short summary
BrGDGT distribution in Gonghai Lake is different from surrounding soils, and its derived temperature reflects a mean annual lake water temperature (LWT) that is higher than the mean annual air temperature (AT). The higher mean annual LWT is due to ice formation in winter that prevents thermal exchange between lake water and air.
Joachim Jansen, Brett F. Thornton, Alicia Cortés, Jo Snöälv, Martin Wik, Sally MacIntyre, and Patrick M. Crill
Biogeosciences, 17, 1911–1932, https://doi.org/10.5194/bg-17-1911-2020, https://doi.org/10.5194/bg-17-1911-2020, 2020
Short summary
Short summary
Lakes are important emitters of the greenhouse gas methane. We use field observations and a model to evaluate the importance of known drivers of methane production and release. Fast and slow changes of the diffusive flux were governed by wind speed and sediment temperature, respectively. Increased turbulence enhanced release, but storms depleted the lakes of gas and limited emissions. Our findings may inform model studies on the effects of weather and climate change on lake methane emissions.
Gabrielle R. Quadra, Sebastian Sobek, José R. Paranaíba, Anastasija Isidorova, Fábio Roland, Roseilson do Vale, and Raquel Mendonça
Biogeosciences, 17, 1495–1505, https://doi.org/10.5194/bg-17-1495-2020, https://doi.org/10.5194/bg-17-1495-2020, 2020
Short summary
Short summary
Hydropower is expanding in the Amazon Basin, but the potential effects of river damming on carbon fluxes cannot be gauged due to a lack of studies. We quantified, for the first time in an Amazonian reservoir, both organic carbon burial and the concentrations of methane in the sediments. We found that the dual role of sediments as both a carbon sink and methane source may be particularly pronounced in this Amazonian reservoir.
Adeline N. Y. Cojean, Jakob Zopfi, Alan Gerster, Claudia Frey, Fabio Lepori, and Moritz F. Lehmann
Biogeosciences, 16, 4705–4718, https://doi.org/10.5194/bg-16-4705-2019, https://doi.org/10.5194/bg-16-4705-2019, 2019
Short summary
Short summary
Our results demonstrate the importance of oxygen in regulating the fate of nitrogen (N) in the sediments of Lake Lugano south basin, Switzerland. Hence, our study suggests that, by changing oxygen concentration in bottom waters, the seasonal water column turnover may significantly regulate the partitioning between N removal and N recycling in surface sediments, and it is likely that a similar pattern can be expected in a wide range of environments.
Boris K. Biskaborn, Larisa Nazarova, Lyudmila A. Pestryakova, Liudmila Syrykh, Kim Funck, Hanno Meyer, Bernhard Chapligin, Stuart Vyse, Ruslan Gorodnichev, Evgenii Zakharov, Rong Wang, Georg Schwamborn, Hannah L. Bailey, and Bernhard Diekmann
Biogeosciences, 16, 4023–4049, https://doi.org/10.5194/bg-16-4023-2019, https://doi.org/10.5194/bg-16-4023-2019, 2019
Short summary
Short summary
To better understand time-series data in lake sediment cores in times of rapidly changing climate, we study within-lake spatial variabilities of environmental indicator data in 38 sediment surface samples along spatial habitat gradients in the boreal deep Lake Bolshoe Toko (Russia). Our methods comprise physicochemical as well as diatom and chironomid analyses. Species diversities vary according to benthic niches, while abiotic proxies depend on river input, water depth, and catchment lithology.
Jeremy McCormack, Finn Viehberg, Derya Akdemir, Adrian Immenhauser, and Ola Kwiecien
Biogeosciences, 16, 2095–2114, https://doi.org/10.5194/bg-16-2095-2019, https://doi.org/10.5194/bg-16-2095-2019, 2019
Short summary
Short summary
We juxtapose changes in ostracod taxonomy, morphology (noding) and oxygen (δ18O) and carbon (δ13C) isotopic composition for the last 150 kyr with independent low-resolution salinity proxies. We demonstrate that for Lake Van, salinity is the most important factor influencing the composition of the ostracod assemblage and the formation of nodes on the valves of limnocytherinae species. Ostracod δ18O shows a higher sensibility towards climatic and hydrological variations than the bulk isotopy.
Robert Scott Winton, Elisa Calamita, and Bernhard Wehrli
Biogeosciences, 16, 1657–1671, https://doi.org/10.5194/bg-16-1657-2019, https://doi.org/10.5194/bg-16-1657-2019, 2019
Short summary
Short summary
A global boom in dam construction throughout the world’s tropics motivated us to review and synthesize information on the water quality impacts of dams with a focus on low-latitude contexts and scope for mitigation. Sediment trapping and reservoir stratification are key process driving chemical and ecological impacts on tropical rivers. We analyze the 54 most-voluminous low-latitude reservoirs and find that stratification seems to be a ubiquitous phenomenon.
Kateri R. Salk, George S. Bullerjahn, Robert Michael L. McKay, Justin D. Chaffin, and Nathaniel E. Ostrom
Biogeosciences, 15, 2891–2907, https://doi.org/10.5194/bg-15-2891-2018, https://doi.org/10.5194/bg-15-2891-2018, 2018
Short summary
Short summary
This paper highlights dynamic nitrogen cycling in a freshwater estuary, with implications for harmful algal blooms and downstream nitrogen loading. Phytoplankton and microbes actively consumed nitrogen in this system, contributing to recycling of nitrogen within the system and permanent nitrogen removal, respectively. However, delivery of nitrogen from the river and fixation of atmospheric nitrogen by phytoplankton outweighed nitrogen uptake, resulting in variable downstream nitrogen delivery.
Luciana Pena Mello Brandão, Ludmila Silva Brighenti, Peter Anton Staehr, Eero Asmala, Philippe Massicotte, Denise Tonetta, Francisco Antônio Rodrigues Barbosa, Diego Pujoni, and José Fernandes Bezerra-Neto
Biogeosciences, 15, 2931–2943, https://doi.org/10.5194/bg-15-2931-2018, https://doi.org/10.5194/bg-15-2931-2018, 2018
Short summary
Short summary
Using mesocosms we investigated the effect of the increase in the allochthonous and autochthonous sources of DOM in a tropical lake, in order to simulate its effects on the characteristics of lakes caused by anthropogenic impacts. The seasonal allochthonous input has much larger effects on the lake and, in addition to increasing nutrients, alters the transparency of water and consequently controls the seasonal dynamics of phytoplankton (autochthonous source) and lake ecology.
Maria Provenzale, Anne Ojala, Jouni Heiskanen, Kukka-Maaria Erkkilä, Ivan Mammarella, Pertti Hari, and Timo Vesala
Biogeosciences, 15, 2021–2032, https://doi.org/10.5194/bg-15-2021-2018, https://doi.org/10.5194/bg-15-2021-2018, 2018
Short summary
Short summary
We extensively tested and refined a direct, high-frequency free-water CO2 measurement method to study the lake net ecosystem productivity. The method was first proposed in 2008, but neglected ever since.
With high-frequency direct methods, we can calculate the lake productivity more precisely, and parameterise its dependency on environmental variables. This helps us expand our knowledge on the carbon cycle in the water, and leads to a better integration of water bodies in carbon budgets.
Justyna J. Hampel, Mark J. McCarthy, Wayne S. Gardner, Lu Zhang, Hai Xu, Guangwei Zhu, and Silvia E. Newell
Biogeosciences, 15, 733–748, https://doi.org/10.5194/bg-15-733-2018, https://doi.org/10.5194/bg-15-733-2018, 2018
Short summary
Short summary
Our paper highlights the importance of dual-nutrient management: nitrogen (N) and phosphorus (P) in lakes with cyanobacterial harmful algal blooms.
Taihu Lake (China) experiences seasonal blooms due to increased input of N and P from field runoff. The main process investigated in our study, nitrification,
is important for N removal through denitrification. We show that nitrification is less efficient during the blooms, due to competition for nutrients between
N microbes and cyanobacteria.
Martin Berggren, Marcus Klaus, Balathandayuthabani Panneer Selvam, Lena Ström, Hjalmar Laudon, Mats Jansson, and Jan Karlsson
Biogeosciences, 15, 457–470, https://doi.org/10.5194/bg-15-457-2018, https://doi.org/10.5194/bg-15-457-2018, 2018
Short summary
Short summary
The quality of dissolved organic carbon (DOC), especially its color, is a defining feature of freshwater ecosystems. We found that colored DOC fractions are surprisingly resistant to natural degradation during water transit through many brown-water lakes. This is explained by the dominance of microbial processes that appear to selectively remove noncolored DOC. However, in lakes where sunlight degradation plays a relatively larger role, significant DOC bleaching occurs.
Peter Berg and Michael L. Pace
Biogeosciences, 14, 5595–5606, https://doi.org/10.5194/bg-14-5595-2017, https://doi.org/10.5194/bg-14-5595-2017, 2017
Short summary
Short summary
We use the aquatic eddy covariance technique – developed first for benthic O2 flux measurements – right below the air–water interface (~ 4 cm) to determine gas exchange rates and coefficients. This use of the technique is particularly useful in studies of gas exchange and its dynamics and controls. The approach can thus help reduce the recognized problem of large uncertainties linked to gas exchange estimates in traditional aquatic ecosystem studies.
Matthew Q. Morison, Merrin L. Macrae, Richard M. Petrone, and LeeAnn Fishback
Biogeosciences, 14, 5471–5485, https://doi.org/10.5194/bg-14-5471-2017, https://doi.org/10.5194/bg-14-5471-2017, 2017
Short summary
Short summary
Shallow ponds and lakes are common features in permafrost systems. We show that the chemistry of these water bodies can be dynamic, although the changes are consistent through time between ponds. This synchrony in some water chemistry appears to be related to water level variations. Because hydrological conditions can vary greatly over the course of the year and during a storm, this work underscores the importance of interpreting water samples from these systems within their hydrologic context.
Thomas Steinsberger, Martin Schmid, Alfred Wüest, Robert Schwefel, Bernhard Wehrli, and Beat Müller
Biogeosciences, 14, 3275–3285, https://doi.org/10.5194/bg-14-3275-2017, https://doi.org/10.5194/bg-14-3275-2017, 2017
Short summary
Short summary
Based on a broad dataset of lake sediment analysis and porewater measurements from various Swiss lakes, this paper argues that the accumulation of organic carbon in the sediment is one of the main driving forces for the generation of reduced substances such as methane and ammonia. These substances significantly contribute to the hypolimnetic oxygen consumption. The relationships presented help to evaluate the scale of the flux of reduced substances where no direct measurements are available.
Ana M. Morales-Williams, Alan D. Wanamaker Jr., and John A. Downing
Biogeosciences, 14, 2865–2875, https://doi.org/10.5194/bg-14-2865-2017, https://doi.org/10.5194/bg-14-2865-2017, 2017
Short summary
Short summary
Our study investigated the mechanisms sustaining cyanobacteria blooms when CO2 is depleted in lake surface waters. We found that when lake CO2 concentrations drop below those of the atmosphere, cyanobacteria switch on carbon concentrating mechanisms (CCMs), allowing them to actively take up bicarbonate. This may provide bloom-forming cyanobacteria with a competitive advantage over other algae. These results provide insight into the timing and duration of blooms in high-nutrient lakes.
Ana R. A. Soares, Ann-Kristin Bergström, Ryan A. Sponseller, Joanna M. Moberg, Reiner Giesler, Emma S. Kritzberg, Mats Jansson, and Martin Berggren
Biogeosciences, 14, 1527–1539, https://doi.org/10.5194/bg-14-1527-2017, https://doi.org/10.5194/bg-14-1527-2017, 2017
María Encina Aulló-Maestro, Peter Hunter, Evangelos Spyrakos, Pierre Mercatoris, Attila Kovács, Hajnalka Horváth, Tom Preston, Mátyás Présing, Jesús Torres Palenzuela, and Andrew Tyler
Biogeosciences, 14, 1215–1233, https://doi.org/10.5194/bg-14-1215-2017, https://doi.org/10.5194/bg-14-1215-2017, 2017
Short summary
Short summary
As first study within my PhD with the general objective to improve and adapt remote sensing algorithms for the estimation of coloured dissolved organic matter (CDOM) content in lakes in a global scale, we carried out this set of measurements and experiments.
This study gives us a better understanding of sources and variability in the optical properties of CDOM in lakes and how photobleaching controls and affects them.
Pratirupa Bardhan, Syed Wajih Ahmad Naqvi, Supriya G. Karapurkar, Damodar M. Shenoy, Siby Kurian, and Hema Naik
Biogeosciences, 14, 767–779, https://doi.org/10.5194/bg-14-767-2017, https://doi.org/10.5194/bg-14-767-2017, 2017
Short summary
Short summary
Although India has the third highest number of dams globally, there is a knowledge gap on the cycling of bioessential elements in such systems. This study (first of its kind) investigates the stable isotopes of nitrate and particulate organic matter in a pristine Indian reservoir. Nitrogen transformations in the anaerobic bottom waters were isotopically characterised. Overall, solar intensity, water depth and redox conditions are the major controls on the biogeochemical cycling in this system.
Bethany N. Deshpande, Sophie Crevecoeur, Alex Matveev, and Warwick F. Vincent
Biogeosciences, 13, 4411–4427, https://doi.org/10.5194/bg-13-4411-2016, https://doi.org/10.5194/bg-13-4411-2016, 2016
Short summary
Short summary
Subarctic lakes are changing in size as a result of permafrost thawing, resulting in mobilization of soil materials. Our study characterizes the carbon and nutrient regime of a set of thaw lakes and their adjacent permafrost soils in a rapidly degrading landscape, showing how these materials create favorable conditions for aquatic bacterial communities. We discuss the controls over the bacterial community, and demonstrate that gain processes are not a primary control.
Marloes Groeneveld, Lars Tranvik, Sivakiruthika Natchimuthu, and Birgit Koehler
Biogeosciences, 13, 3931–3943, https://doi.org/10.5194/bg-13-3931-2016, https://doi.org/10.5194/bg-13-3931-2016, 2016
Short summary
Short summary
Temporal variability in the apparent quantum yield of photochemical CDOM mineralisation in a boreal brown water lake was severalfold smaller than previously reported across different lakes. Simulated DIC photoproduction (2012–2014) averaged 2.0 ± 0.1 to 10.3 ± 0.7 g C m−2 yr−1 using the least and most reactive sample, which represented 1 to 8 % of the total mean CO2 emissions. Thus, direct CDOM photomineralisation makes only a minor contribution to mean CO2 emissions from Swedish brown water lakes.
Damien Bouffard and Marie-Elodie Perga
Biogeosciences, 13, 3573–3584, https://doi.org/10.5194/bg-13-3573-2016, https://doi.org/10.5194/bg-13-3573-2016, 2016
Short summary
Short summary
This survey of an exceptional flood over Lake Geneva challenges the long-standing hypothesis that dense, particle-loaded and oxygenated rivers plunging into lakes necessarily contribute to deep-oxygen replenishment. We identified some river intrusions as hot spots for oxygen consumption, where inputs of fresh river-borne organic matter reactivate the respiration of more refractory lacustrine organic matter in a process referred to as "priming effect".
Raquel Mendonça, Sarian Kosten, Sebastian Sobek, Simone Jaqueline Cardoso, Marcos Paulo Figueiredo-Barros, Carlos Henrique Duque Estrada, and Fábio Roland
Biogeosciences, 13, 3331–3342, https://doi.org/10.5194/bg-13-3331-2016, https://doi.org/10.5194/bg-13-3331-2016, 2016
Short summary
Short summary
Hydroelectric reservoirs in the tropics emit greenhouse gases but also bury carbon in their sediments. We investigated the efficiency of organic carbon (OC) burial in a large tropical reservoir, using spatially resolved measurements of sediment accumulation, and found that more than half (~ 57 %) of the OC deposited onto the sediment is buried. This high efficiency in OC burial indicates that tropical reservoirs may bury OC more efficiently than natural lakes.
Phil-Goo Kang, Myron J. Mitchell, Patrick J. McHale, Charles T. Driscoll, Shreeram Inamdar, and Ji-Hyung Park
Biogeosciences, 13, 2787–2801, https://doi.org/10.5194/bg-13-2787-2016, https://doi.org/10.5194/bg-13-2787-2016, 2016
Short summary
Short summary
Lakes play important roles in controlling organic matter derived from watersheds and within-lake production. The organic matter is normally measured by elemental quantities, such as carbon(C) and nitrogen(N), because the two elements are essential for aquatic ecosystems. We observed an decrease of C, but an increase of N in organic matters in a lake. The reason of the different pattern might be that inorganic N in the lake appeared to be recycled to produce organic N due to within-lake processes.
L. Pinho, C. M. Duarte, H. Marotta, and A. Enrich-Prast
Biogeosciences, 13, 865–871, https://doi.org/10.5194/bg-13-865-2016, https://doi.org/10.5194/bg-13-865-2016, 2016
Short summary
Short summary
Unlike the positive relationship reported before between partial pression of carbon dioxide and dissolved organic carbon for lake waters, we found no significant relationship in our low-latitude lakes, despite very broad ranges in both variables. The strength of this relationship declines with increasing water temperature, suggesting substantial differences in carbon cycling in warm lakes, which must be considered when upscaling limnetic carbon cycling to global scales.
B. Burpee, J. E. Saros, R. M. Northington, and K. S. Simon
Biogeosciences, 13, 365–374, https://doi.org/10.5194/bg-13-365-2016, https://doi.org/10.5194/bg-13-365-2016, 2016
Short summary
Short summary
This study investigates microbial nutrient limitation patterns across a region of southwest Greenland in relation to environmental factors. Using microbial enzyme activities to infer nutrient limitation patterns, we determined that most lakes are P-limited. Further, P limitation was tightly controlled by lake dissolved organic carbon (DOC) concentration.
A. Przytulska, J. Comte, S. Crevecoeur, C. Lovejoy, I. Laurion, and W. F. Vincent
Biogeosciences, 13, 13–26, https://doi.org/10.5194/bg-13-13-2016, https://doi.org/10.5194/bg-13-13-2016, 2016
Short summary
Short summary
Permafrost thaw lakes are a subject of increasing research interest given their abundance across the northern landscape. Our aim in the present study was to characterize the photosynthetic communities in a range of subarctic thaw lakes using a combination of HPLC analysis of algal and bacterial pigments, flow cytometry and molecular analysis. Our results showed that the thaw lakes contain diverse phototrophic communities and are a previously unrecognized habitat for abundant picophotoautotrophs.
T. Roiha, I. Laurion, and M. Rautio
Biogeosciences, 12, 7223–7237, https://doi.org/10.5194/bg-12-7223-2015, https://doi.org/10.5194/bg-12-7223-2015, 2015
Short summary
Short summary
Global warming thaws permafrost and accelerates the formation of thaw ponds in subarctic and arctic regions. These abundant ponds receive large terrestrial carbon inputs from the thawing and eroding permafrost, which is mainly used by bacterioplankton for the production of new biomass. Bacteria metabolism also produces high levels of CO2 and CH4, which make thaw ponds important sources of greenhouse gases to the atmosphere. We present carbon dynamics in thaw ponds in northern Quebec.
P. Glaz, J.-P. Gagné, P. Archambault, P. Sirois, and C. Nozais
Biogeosciences, 12, 6999–7011, https://doi.org/10.5194/bg-12-6999-2015, https://doi.org/10.5194/bg-12-6999-2015, 2015
Short summary
Short summary
In this study, we showed that logging activities have a short-term impact (1 year after the perturbation) on water quality in boreal Eastern Canadian Shield lakes. However, this effect seems to mitigate 2 years after the perturbation. Further, the analysis of the absorbance and fluorescence data showed that while DOC concentrations did significantly increase in perturbed lakes, the DOM quality did not measurably change.
Z. T. Yu, X. J. Wang, E. L. Zhang, C. Y. Zhao, and X. Q. Liu
Biogeosciences, 12, 6605–6615, https://doi.org/10.5194/bg-12-6605-2015, https://doi.org/10.5194/bg-12-6605-2015, 2015
Short summary
Short summary
Bosten Lake is the largest inland freshwater lake in China, which has been impacted by land use changes, with implications for carbon burial. Our study showed a large spatial variability in total organic carbon (TOC) (1.8–4.4%); 54–90% of TOC was from autochthonous sources. Higher TOC content was found in the east and central-north sections and near the mouth of the Kaidu River, which was attributable to allochthonous, autochthonous plus allochthonous, and autochthonous sources, respectively.
W. Liu, L. Yao, Z. Wang, Z. Xiong, and G. Liu
Biogeosciences, 12, 6059–6070, https://doi.org/10.5194/bg-12-6059-2015, https://doi.org/10.5194/bg-12-6059-2015, 2015
J. Boike, C. Georgi, G. Kirilin, S. Muster, K. Abramova, I. Fedorova, A. Chetverova, M. Grigoriev, N. Bornemann, and M. Langer
Biogeosciences, 12, 5941–5965, https://doi.org/10.5194/bg-12-5941-2015, https://doi.org/10.5194/bg-12-5941-2015, 2015
Short summary
Short summary
We show that lakes in northern Siberia are very efficient with respect to energy absorption and mixing using measurements as well as numerical modeling. We show that (i) the lakes receive substantial energy for warming from net short-wave radiation; (ii) convective mixing occurs beneath the ice cover, follow beneath the ice cover, following ice break-up, summer, and fall (iii) modeling suggests that the annual mean net heat flux across the bottom sediment boundary is approximately zero.
C. Morana, F. Darchambeau, F. A. E. Roland, A. V. Borges, F. Muvundja, Z. Kelemen, P. Masilya, J.-P. Descy, and S. Bouillon
Biogeosciences, 12, 4953–4963, https://doi.org/10.5194/bg-12-4953-2015, https://doi.org/10.5194/bg-12-4953-2015, 2015
J. K. Heslop, K. M. Walter Anthony, A. Sepulveda-Jauregui, K. Martinez-Cruz, A. Bondurant, G. Grosse, and M. C. Jones
Biogeosciences, 12, 4317–4331, https://doi.org/10.5194/bg-12-4317-2015, https://doi.org/10.5194/bg-12-4317-2015, 2015
Short summary
Short summary
The relative magnitude of thermokarst lake CH4 production in surface sediments vs. deeper-thawed permafrost is not well understood. We assessed CH4 production potentials from a lake sediment core and adjacent permafrost tunnel in interior Alaska. CH4 production was highest in the organic-rich surface lake sediments and recently thawed permafrost at the bottom of the talik, implying CH4 production is highly variable and that both modern and ancient OM are important to lake CH4 production.
R. M. Manasypov, S. N. Vorobyev, S. V. Loiko, I. V. Kritzkov, L. S. Shirokova, V. P. Shevchenko, S. N. Kirpotin, S. P. Kulizhsky, L. G. Kolesnichenko, V. A. Zemtzov, V. V. Sinkinov, and O. S. Pokrovsky
Biogeosciences, 12, 3009–3028, https://doi.org/10.5194/bg-12-3009-2015, https://doi.org/10.5194/bg-12-3009-2015, 2015
Short summary
Short summary
A year-around hydrochemical study (including full winter freezing and spring flood) of shallow thermokarst lakes from a discontinuous permafrost zone of western Siberia revealed conceptually new features of element concentration evolution over different seasons within a large scale of the lake size.
C. Morana, A. V. Borges, F. A. E. Roland, F. Darchambeau, J.-P. Descy, and S. Bouillon
Biogeosciences, 12, 2077–2088, https://doi.org/10.5194/bg-12-2077-2015, https://doi.org/10.5194/bg-12-2077-2015, 2015
F. S. Pacheco, M. C. S. Soares, A. T. Assireu, M. P. Curtarelli, F. Roland, G. Abril, J. L. Stech, P. C. Alvalá, and J. P. Ometto
Biogeosciences, 12, 147–162, https://doi.org/10.5194/bg-12-147-2015, https://doi.org/10.5194/bg-12-147-2015, 2015
Short summary
Short summary
CO2 fluxes in Funil Reservoir (FR) is driven by primary production and river inflow dynamics. Our findings suggest that the lack of spatial data in reservoir C budget calculations can affect regional and global estimates. Our results support the idea that the FR is a dynamic system where the hydrodynamics represented by changes in the river inflow and retention time are potentially a more important force driving both the Chl and pCO2 spatial variability than the in-system ecological factors.
Cited articles
Aalto, R., Maurice-Bourgoin, L., Dunne, T., Montgomery, D. R., Nittrouer, C.
A., and Guyot, J.-L.: Episodic sediment accumulation on Amazonian flood
plains influenced by El Niño/Southern Oscillation, Nature, 425, 493–497,
2003.
Adams, W. A.: The effect of organic matter on the bulk and true densities of
some uncultivated podzolic soils, J. Soil Sci., 24, 10–17, 1973,
Arnarson, T. S. and Keil, R. G.: Organic-mineral interactions in marine
sediments studied using density fractionation and X-ray photoelectron
spectroscopy, Org. Geochem., 32, 1401–1415,
2001.
Arnarson, T. S. and Keil, R. G.: Changes in organic matter-mineral
interactions for marine sediments with varying oxygen exposure times,
Geochim. Cosmochim. Ac., 71, 3545–3556, 2007.
Baisden, W. T., Amundson, R., Cook, A. C., and Brenner, D. L.: Turnover and
storage of C and N in five density fractions from California annual grassland
surface soils, Global Biogeochem. Cy., 16, 1117, https://doi.org/10.1029/2001GB001822, 2002a.
Baisden, W. T., Amundson, R., Brenner, D. L., Cook, A. C., Kendall, C., and
Harden, J. W.: A multi-isotope C and N modeling analysis of soil organic
matter turnover and transport as a function of soil depth in a California
annual grassland soil chronosequence, Global Biogeochem. Cy., 16, 1135,
https://doi.org/10.1029/2001GB001823, 2002b.
Baldock, J. A. and Skjemstad, J. O.: Role of the soil matrix and minerals in
protecting natural organic materials against biological attack, Org.
Geochem., 31, 697–710, 2000.
Bergamaschi, B. A., Tsamakis, E., Keil, R. G., and Hedges, J. I.: The effect
of grain size and surface area on organic matter, lignin and carbohydrate
concentration, and molecular compositions in Peru Margin sediments, Geochim.
Cosmochim. Ac., 61, 1247–1260, 1997.
Bianchi, T. A., Galler, J. J., and Allison, M. A.: Hydrodynamic sorting and
transport of terrestrially derived organic carbon in sediments of the
Mississippi and Atchafalaya rivers, Est. Coast. Shelf Sci., 73, 211–222,
2007.
Blair, N. E. and Aller, R. C.: The fate of terrestrial organic carbon in the
marine environment, Annu. Rev. Mar. Sci., 4, 17.1–17.23,
2012.
Blair, N. E., Leithold, E. L., Ford, S. T., Peller, K. A., Holmes, J. C., and
Perkey, D. W.: The persistence of memory: The fate of ancient sedimentary
organic carbon in a modern sedimentary system, Geochim. Cosmochim. Ac., 67,
63–73, 2003.
Bock, M. J. and Mayer, L. M.: Mesodensity organo-clay associations in a
nearshore sediment, Mar. Geol., 163, 65–75, 2000.
Bridge, J. S. and Bennett, S. J.: A model for the entrainment and transport
of sediment grains of mixed sizes, shapes, and densities, Water Resour. Res.,
28, 337–363, 1992.
Broecker, W. S. and Walton A.: The geochemistry of C14 in fresh-water
systems., Geochim. Cosmochim. Ac., 16, 15–38,
1959.
Canuel, E. A.: Relations between river flow, primary production and fatty
acid composition of particulate organic matter in San Francisco and
Chesapeake Bays: a multivariate approach, Org. Geochem., 32, 563–583,
2001.
Canuel, E. A., Lerberg, E. J., Dickhut, R. M., Kuehl, S. S., Bianchi, T. S.,
and Wakeham, S. G.: Changes in sediment and organic carbon accumulation in a
highly-disturbed ecosystem: The Sacramento-San Joaquin River Delta,
(California, USA.), Mar. Pollut. Bull., 59, 154–163,
2009.
Castanha, C., Trumbore, S., and Amundson, R.: Methods of separating soil
carbon pools affect the chemistry and turnover time of isolated fraction,
Radiocarbon, 50, 83–97, 2008.
Cerli, C., Celi, L., Kalbitz, K., Guggenberger, G., and Kaiser, K.:
Separation of light and heavy organic matter fractons in soil – Testing for
proper density cut-off and dispersion level, Geoderma, 170, 403–416,
2012.
Cloern, J. E., Canuel, E. A., and Harris, D.: Stable carbon and nitrogen
isotope composition of aquatic and terrestrial plants of the San Francisco
Bay estuarine system, Limnol. Oceanogr., 47, 713–729, 2002.
Conomos, T. J., Smith, R. E., and Gartner, J. W.: Environmental setting of
San Francisco Bay, in: Temporal Dynamics of an Estuary: San Francisco Bay,
edited by: Cloern, J. E. and Nichols, F. H., Hydrobiologica, 129, 1–12,
1985.
Cranwell, P. A., Eglinton, G., and Robinson, N.: Lipids of aquatic organisms
as potential contributors to lacustrine sediments – II, Org. Geochem., 11,
513–527, 1987.
Cranwell, P. A., Creighton, M. E., and Jaworski, G. H. M.: Lipids of four
freshwater chrysophytes, Phytochem., 27, 1053–1059.
1988.
Cranwell, P. A., Jaworski, G. H. M., and Bickley, H. M.: Hydrocarbons,
sterols, esters, and fatty acids in six freshwater chlorophytes, Phytochem.,
29, 145–151, 1990.
Crow, S. E., Swanston, C. W., Lajtha, K., Brooks, J. R., and Keirstead, H.:
Density fractionation of forest soils: methodological questions and
interpretation of incubation results and turnover time in an ecosystem
context, Biogeochem., 85, 69–90, 2007.
Dade, W. B. and Friend, P. F.: Grain size, sediment transport regime, and
channel slope in alluvial rivers, J. Geol., 106, 661–676, 1998.
de Leeuw, J. W. and Largeau, C.: A review of macro-molecular organic
compounds that comprise living organisms and their role in kerogen, coal, and
petroleum formation, in: Organic Geochemistry, edited by: Engel, M. H. and
Macko, S. A., Plenum Press, New York, 23–72, 1993.
Dembitsky, V. M., Rezanka, T., and Rozentsvet, O. A.: Lipid composition of
three macrophytes from the Caspian Sea, Phytochem., 33, 1015–1019,
1993.
Derenne, S., Largeau, C., Casadevall, E., Berkaloff, C., and Rousseau, B.:
Chemical evidence of kerogen formation in source rocks and oil shales via
selective preservation of thin resistant outer walls of microalgae: Origin of
ultralaminae, Geochim. Cosmochim. Ac., 55, 1041–1050,
1993.
Dickens, A. F., Gélinas, Y., Masiello, C. A., Wakeham, S. G., and Hedges,
J. I.: Reburial of fossil carbon in marine sediments, Nature, 427, 336–339,
2004.
Dickens, A. F., Baldock, J. A., Smernik, R. J., Wakeham, S. G., Arnarson, T.
A., Gélinas, Y., and Hedges, J. I.: Solid state 13C NMR analysis of
size and density fractions of marine sediments. Insights into carbon sources
and preservation mechanisms, Geochim. Cosmochim. Ac., 70, 666–686,
2006.
Douglas, P. M. J., Pagani, M., Eglinton, T. I., Brenner, M., Hodell, D. A.,
Curtis, J. H., Ma, K.F., and Breckenridge, A.: Preaged plant waxes in
tropical lake sediments and their influence on the chronology of molecular
paleoclimate records, Geochim. Cosmochim. Ac., 141, 346–364,
2014.
Drenzek, N. J., Hughen, K. A., Montluçon, D. B., Southon, J. R., dos
Santos, G. M., Druffel, E. R. M., Giosan, L., and Eglinton, T. I.: A new look
at old carbon in active margin sediments, Geol., 37, 239–242, 2009.
Dunne, T., Mertes, L. A. K., Meade, R. H., Richey, J. E., and Frosberg, B.
R.: Exchanges of sediment between the flood plain and channel of the Amazon
River in Brazil, Geol. Soc. Am. Bull., 110, 450–467,
2003.
Eglinton, T. I., Benitez-Nelson, B. C., Pearson, A., McNichol, A., Bauer, J.
E., and Druffel, E. R. M.: Variability in radiocarbon ages of individual
organic compounds from marine sediments, Science, 277, 796–799, 1997.
Ewing, S. A., Sanderman, J., Baisden, T. W., Wang, Y., and Amundson, R.: Role
of large-scale soil structure in organic carbon turnover; evidence from
California grassland soils, J. Geophys. Res., 111, nGO3012,
https://doi.org/10.1029/2006JG000174, 2006.
Galy, V. and Eglinton, T.: Protracted storage of biospheric carbon in the
Ganges-Brahmaputra basin, Nature Geosci., 4, 843–847, 2011.
Galy, V., France-Lanord, C., and Lartiges B.: Loading and fate of particulate
organic carbon from the Himalaya to the Ganga-Bramaputra delta, Geochim.
Cosmochim. Ac., 72, 1767–1787, 2008.
Galy, V., Peucker-Ehrenbrink, B., and Eglinton, T.: Global carbon export from
the terrestrial biosphere controlled by erosion, Nature, 521, 204–207, 2015.
Golchin, A., Oades, J. M., Skjemstad, J. O., and Clarke, P.: Study of free
and occluded particulate organic-matter in soils by solid state 13C
Cp/MAS NMR pectroscopy and scanning electron microscopy, Aust. Soil
Res., 32, 285–309, 1994.
Gomez, B., Brackley, H. L., Hicks, D. M., Neff, H., and Rogers, K. M.:
Organic carbon in floodplain alluvium: Signature of historic variations in
erosion processes associated with deforestation, Waipaoa River basin, New
Zealand, J. Geophys. Res., 109, F04011, https://doi.org/10.1029/2004JF000154, 2004.
Gordon, E. S. and Goñi, M. A.: Sources and distributions of terrigenous
organic matter delivered by the Atchafalaya River to sediments in the
northern Gulf of Mexico, Geochim. Cosmochim. Ac., 67, 2359–2375,
2003.
Gordon, E. S. and Goñi, M. A.: Controls on the distribution and
accumulation of terrigenous organic matter in sediments from the Mississippi
and Atchafalaya River margin, Mar. Chem., 92, 331–352, 2004.
Griffith, D. R., Martin, W. T., and Eglinton, T. I.: The radiocarbon age of
organic carbon in marine surface sediments, Geochim. Cosmochim. Ac., 74,
6788–6800, 2010.
Hassanzadeh, Y.: Hydraulics of Sediment Transport, Hydrodynamics – Theory
and Model, edited by: Zheng, J.-H., ISBN: 978-953-51-0130-7, InTech,
available at:
http://www.intechopen.com/books/hydrodynamics-theory-and-model/hydraulics-of-sediment-transport,
2012.
Hayes, J. M.: Fractionation of the isotopes of carbon and hydrogen in
biosynthetic processes, in: Stable Isotope Geochemistry, edited by: Valley,
J. W. and Cole, D. R., Rev. Mineral. Geochem., 43, 225–278,
2001.
Hedges, J. I. and Keil, R. G.: Sedimentary organic matter preservation: an
assessment and speculative synthesis, Mar. Chem., 49, 81–115,
1995.
Hedges, J. I. and Oades, M.: A comparative study of marine and soil
geochemistry, Org. Geochem., 27, 319–361,
1997.
Herbold, B. and Moyle, P. B.: The ecology of the Sacramento-San Joaquin Delta: a community profile, US Fish Wildl. Serv. Biol. Rep. 85, xi + 106 pp., 1989.
Hodson, M. E., Langan, S. J., and Meriau, S.: Determination of mineral
surface area in relation to the calculation of weathering rates, Geoderma,
83, 35–54, 1998.
Hoffmann, T., Glatzel, S., and Dikau, R.: A carbon storage perspective on
alluvial sediment storage in the Rhine catchment, Geomorphol., 108, 127–137,
2009.
Horowitz, A. J. and Elrick, K. A.: The relation of stream sediment surface
area, grain size and composition to trace element chemistry, Appl. Geochem.,
2, 437–451, 1987.
Jassby, A. D. and Cloern, J. E.: Organic matter sources and rehabilitation of
the Sacramento-San Joaquin Delta (California, USA), Aquat. Conserv., 10,
323–352, 2000.
Jepson, R., Roberts, J., and Lick, W.: Effects of bulk density on sediment
erosion rates, Water Air Soil Pollut., 99, 21–31, 1997.
Kaiser, M. and Berhe, A. A.: How does sonication affect the mineral and
organic constituents of soil aggregates? – A review, J. Plant Nutr. Soil
Sci., 177, 479–475, 2014.
Karlen, I., Olsson, I. U., Kallburg, P.- and Kilici, S.: Absolute
determination of the activity of two 14C dating standards, Arkiv
Geofysik, 4, 465–471, 1964.
Keil, R. G. and Mayer, L. M.: Mineral matrices and organic matter, in:
Treatise on Geochemistry, edited by: Falkowski, P. G. and Freeman, K. H.,
Elsevier, 12, 337–359, 2014.
Keil, R. G., Tsamakis, E., Fuh, C. B., Giddings, J. C., and Hedges, J. I.:
Mineralogical and textural controls on the organic composition of coastal
marine sediments: hydrodynamic separation using SPLITT-fractionation,
Geochim. Cosmochim. Ac., 54, 879–893, 1994a.
Keil, R. G., Montluçon, D. B., Prahl, F. G., and Hedges, J. I.: Sorptive
preservation of labile organic matter in marine sediments, Nature, 370,
549–552, 1994b.
Keil, R. G., Mayer, L. M., Quay, P. D., Richey, J. E., and Hedges, J. I.:
Loss of organic matter from riverine particles in deltas, Geochim. Cosmochim.
Ac., 61, 1507–1511, 1997.
Keil, R. G., Tsamakis, E., Giddings, and J. C., Hedges, J. I.: Biochemical
distributions (amino acids, neutral sugars, and lignin phenols) among
size-classes of modern marine sediments from the Washington Margin, Geochim.
Cosmochim. Ac., 62, 1347–1364, 1998.
Leithold, E. L., Blair, N. E., and Perkey, D. W.: Geomorphologic controls on
the age of particulate organic carbon from small mountainous and upland
rivers, Global Biogeochem. Cy., 20, GB3022, https://doi.org/10.1029/2005GB002677,
2006.
Lu, Y. H., Bauer, J. E., Canuel, E. A., Chambers, R. M., Yamashita, Y.,
Jaffé, R., and Barrett, A.: Effects of land use on sources and ages of
inorganic and organic carbon in temperate headwater streams, Biogeochemistry,
119, 275–292, 2014.
Masiello, C. A.: New directions in black carbon organic geochemistry, Mar.
Chem., 92, 201–213, 2004.
Masiello, C. A. and Druffel, E. R. M.: Carbon isotope geochemistry of the
Santa Clara River, Global Biogeochem. Cy., 15, 407–416,
2001.
Mayer, L. M.: Relationships between mineral surfaces and organic carbon
concentrations in soils and sediments, Chem. Geol., 114, 347–363,
1994a.
Mayer, L. M.: Surface area control of organic carbon accumulation in
continental shelf sediments, Geochim. Cosmochim. Ac., 58, 1271–1284, 1994b.
Mayer, L. M.: Extent of coverage of mineral surfaces by organic matter in
marine sediments, Geochim. Cosmochim. Ac., 63, 207–215,
1999.
Mayer, L. M., Jumars, P. A., Taghon, G. L., Macko, S. A., and Trumbore, S.:
Low-density particles as potential nitrogenous foods for benthos, J. Mar.
Res., 51, 373–389, 1993.
Mayer, L. M., Schick, L. L., Hardy, K. R., Wagai, R., and McCarthy, J.:
Organic matter in small mesopores in sediments and soils, Geochim. Cosmochim.
Ac., 68, 3863–3872, 2004.
McIntosch, H. A., McNichol, A. P., Xu, L., and Canuel, E. A.: Source-age
dynamics of estuarine particulate organic matter using fatty acid
δ13C and Δ14C composition, Limnol. Oceanogr., 60,
611–628, 2015.
McNichol, A.P., Osborne, E.A., Gagnon, A. R., Fry, B., and Jones,G. A.: TIC,
TOC, DIC, DOC, PIC, POC – unique aspects in the preparation of oceanographic
samples for 14CAMS, Nucl. Instrum. Methods, B, 92, 162–165, 1994.
Megens, L., van der Plicht, J., and de Leeuw, J. W.: Temporal variations in
13C and 14C concentrations in particulate organic matter from the
southern North Sea, Geochim. Cosmochim. Ac., 65, 2899–2911,
2001.
Megens, L., van der Plicht, J., de Leeuw, J. W., and Smedes, F.: Stable
carbon and radiocarbon isotope compositions of particle size fractions to
determine origins of sedimentary organic matter in an estuary, Org. Geochem.,
33, 945–952, 2002.
Milliman, J. D. and Farnsworth, K. L.: River Discharge to the Coastal Ocean,
Cambridge Univ. Press., 384 pp., 2011.
Mitra, S., Bianchi, T. S., McKee, B. A., and Sutula, M.: Black carbon from
the Mississippi River: quantities, sources, and potential implications for
the global carbon cycle, Environ,. Sci. Technol., 36, 2296–2302,
2002.
Nilsen, E. B. and Delaney, M. L.: Factors influencing the biogeochemistry of
sedimentary carbon and phosphorus in the Sacramento-San Joaquin Delta,
Estuaries, 28, 653–663, 2005.
Oana, S. and Deevey, E. S.: Carbon 13 in lake waters, and its possible
bearing on paleolimnology, Am. J. Sci. A, 258, 253–272, 1960.
Pearson, A.: Pathways of carbon assimilation and their impact on organic
matter values of δ13C, edited by: Timmis, K., Springer-Verlag,
Berlin, 143–156, https://doi.org/10.1007/978-3-540-77587-4_9, 2010.
Philippsen, B.: The freshwater reservoir effect in radiocarbon dating,
Heritage Sci., 1, 24, https://doi.org/10.1186/2050-7445-1-24, 2013.
Prahl, F. G.: Chemical evidence of differential particle dispersal in the
southern Washington coastal environment, Geochim. Cosmochim. Ac., 49,
2533–2539, 1985.
Ransom, B., Kim, D., Kastner, M., and Wainwright, S.: Organic matter
preservation on continental slopes: importance of mineralogy and surface
area, Geochim. Cosmochim. Ac., 62, 1329–1345,
1998.
Raymond, P. A. and Bauer, J. E.: Riverine export of aged terrestrial organic
matter to the North Atlantic Ocean, Nature, 409, 497–500,
2001a.
Raymond, P. A. and Bauer J. E.: Use of 14C and 13C natural
abundances for evaluating riverine, estuarine and coastal DOC and POC sources
and cycling: a review and synthesis, Org. Geochem., 32, 469–485,
2001b.
Reed, D. J.: Understanding tidal marsh sedimentation in the Sacramento-San
Joaquin Delta, California, J. Coast. Res., 36, 605–611, 2002.
Reneau, S. L. and Dietrich, W. E.: Erosion rates in the southern Oregon Coast
Range: Evidence for an equilibrium between hillslope erosion and sediment
yield, Earth Surf. Proc. Landforms, 16, 307–322,
1991.
Richter, D. D., Markewitz, D., Trumbore, S. E., and Wells, G. G.: Rapid
accumulation and turnover of soil carbon in a re-establishing forest, Nature,
400, 56–58, 1999.
Rosenheim, B. E., Roe, K. M., Roberts, B. J., Kolker, A. S., Allison, M. A.,
and Johannesson, K. H.: River discharge influences on particulate organic
carbon age structure in the Mississippi/Atchafalaya River System, Global
Biogeochem. Cy., 27, 154–166, 2013.
Rozentsvet, O. A., Dembitsky, and N. M., and Zhuicova, V. S.: Lipids from
macrophytes of the middle Volga, Phytochem., 38, 1209–1213,
1995.
Rozentsvet, O. A., Saksonov, S. V., and Dembitsky, V. M.: Hydrocarbons, fatty
acids, and lipids of freshwater grasses of the Potamogetonaceae family,
Biochemistry-USSR+, 67, 422–429, 2002.
Rühlmann J., Körschens, M., and Greafe, J.: A new approach to
calculate the particle density of soils considering properties of the soil
organic matter and the mineral matrix, Geoderma, 130, 272–283, 2006.
Rullkötter, J. and Michaelis, W.: The structure of kerogen and related
materials. A review of recent progress and future trends, Org. Geochem., 16,
829–852, 1990.
Sampere, T. P., Bianchi, T. S., Wakeham, S. G., and Allison, M. A.: Sources of
organic matter in surface sediments of the Louisiana continental margin:
effects of primary depositional/transport pathways and Hurricane Ivan, Cont.
Shelf Res., 28, 2472–2487, 2008.
Schoellhamer, D. H., Wright, S. A., and Drexler, J. Z.: Conceptual model of
sedimentation in the Sacramento-San Joaquin River Delta, San Francisco
Estuary Watershed Sci., 10, 1–25, 2012.
Schoellhamer, D. H., Wright, S. A., and Drexler, J. Z.: Adjustment of the San
Francisco estuary and watershed to decreasing sediment supply in the 20th
century, Mar. Geol., 345, 63–71, 2013.
Schreiner, K. M., Bianchi, T. S., Eglinton, T. I., Allison, M. A., and Hanna,
A. J.: Sources of terrigenous inputs to surface sediments of the Colville
River Delta and Simpson's Lagoon, Beaufort Sea, Alaska, J. Geophys.
Res.-Biogeo., 118, 808–824, 2013.
Shang, C. and Tiessen, H.: Sequential versus parallel density fractionation
of silt-sized organomineral complexes of tropical soils using metatungstate,
Soil Biol. Biochem., 33, 259–262, 2001.
Sollins, P., Swanston, C., Kleber, M., Filley, T. Kramer, M., Crow, S.,
Caldwell, B. A., Lajtha, K., and Bowden, R.: Organic C and N stabilization in
a forest oil: Evidence from sequential density fractionation, Soil. Biol
Biochem., 38, 3313–3324, 2006.
Stankiewicz, B. A., Briggs, D. E. G., Michels, R., Collinson, M.E., Flannery,
M. B., and Evershed, R. P.: Alternative origin of aliphatic polymer in
kerogen, Geology, 28, 559–562,
2000.
Stuiver, M.: Workshop on 14C data reporting, Radiocarbon, 22, 964–966,
1980.
Stuiver M. and Polach, H. A.: Discussion: Reporting of 14C data, Radiocarbon,
19, 355–363, 1997.
Trumbore, S. E.: Radiocarbon and soil carbon dynamics, Annu. Rev. Earth Pl.
Sc., 37, 47–66, 2009.
Trumbore, S. E., Vogel, and J. S., and Southon, J. R.: AMS 14C
measurements of fractionated soil organic matter: An approach to deciphering
the soil carbon cycle, Radiocarbon, 31, 644–654, 1989.
Veilleux, M.-H., Dickens, A. F., Brandes, J., and Gélinas Y.: Density
separation of combustion-derived soot and petrogenic graphitic black carbon:
Quantification and isotopic characterization, in: From Deep-Sea to Coastal
Zones: Methods and Techniques For Studying Paleoenvironments, IOP Conf.
Series, Earth and Environ. Sci., 5, 1–9, 2010.
Volkman, J. K.: Lipid markers for marine organic matter, in: The Handbook of
Environmental Chemistry, vol. 2, Reactions and Processes, Part N, Marine
Organic Matter: Biomarkers, Isotopes and DNA, edited by: Hutzinger, O. and
Volkman, J. K., Springer, Berlin, 27–70, 2006.
Volkman, J. K., Barrett, S. M., Blackburn, S. I., Mansouri, M. P., Sikes, E.
L., and Gelin, F.: Microalgal biomarkers: A review of recent research
developments, Org. Geochem., 29, 1163–1169,
1998.
von Reden, K. F., Schneider, R. F., McNichol, A. P., and Pearson, A.:
14C-AMS measurements of < 100 µg samples with a
high-current system, Radiocarbon, 40, 247–253, 1998.
Wakeham, S. G., Lee, C, Hedges, J. I., Hernes, P. J., and Peterson, M. L.:
Molecular indicators of diagenetic status in marine organic matter, Geochim.
Cosmochim. Ac., 61, 5363–5369, 1997.
Wakeham, S. G., McNichol, A. P., Kostka, J., and Pease, T. K.: Natural
abundance radiocarbon as a tracer of assimilation of petroleum carbon by
bacteria in salt marsh sediments, Geochim. Cosmochim. Ac., 70, 1761–1771,
2006.
Wakeham, S. G., Canuel, E. A., Lerberg, E. J., Mason, P., Sampere, T., and
Bianchi T.: Partitioning of organic matter in continental margin sediments
among density fractions, Mar. Chem., 115, 211–225,
2009.
Waterson, E. J. and Canuel, E. A.: Sources of sedimentary organic matter in
the Mississippi River and adjacent Gulf of Mexico as revealed by lipid
biomarker and δ13CTOC analyses, Org. Geochem., 39, 422–439,
2008.
Weiler, R. R. and Mills, A. A.: Surface properties and pore structure of
marine sediments, Deep-Sea Res., 12, 511–529, 1965.
Wright, S. A., and Schoellhamer, D. H.: Trends in the sediment yield of the
Sacramento River, California, 1957–2001, San Francisco Estuary and Watershed
Science, 2, 1–14, 2004.
Wright, S. A. and Schoellhamer, D. H.: Estimating sediment budgets at the
interface between rivers and estuaries with application to the Sacramento-San
Joaquin River Delta, Water Resour. Res., 41, W09428, https://doi.org/10.1029/2004WR003753,
2005.
Short summary
Bed sediments from the Sacramento-San Joaquin River Delta (CA) were fractionated according to density and analyzed for sediment mass distribution, elemental (C and N) composition, mineral surface area, and stable carbon and radiocarbon isotope compositions of organic carbon (OC) and fatty acids to evaluate the nature of organic carbon in river sediments. These data demonstrate the complex source and age distributions within river sediments.
Bed sediments from the Sacramento-San Joaquin River Delta (CA) were fractionated according to...
Altmetrics
Final-revised paper
Preprint