Articles | Volume 15, issue 13
https://doi.org/10.5194/bg-15-4147-2018
© Author(s) 2018. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/bg-15-4147-2018
© Author(s) 2018. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Research article
| 
09 Jul 2018
Research article |
| 09 Jul 2018
| 09 Jul 2018
Long-chain diols in rivers: distribution and potential biological sources
NIOZ Royal Netherlands Institute for Sea Research, Department of
Marine Microbiology and Biogeochemistry, and Utrecht University, P.O. Box 59,
1790 AB Den Burg, the Netherlands
Frédérique Kirkels
Utrecht University, Department of Earth Sciences, Faculty of
Geosciences, Princetonlaan 8A, 3584 CB Utrecht, the Netherlands
Francien Peterse
Utrecht University, Department of Earth Sciences, Faculty of
Geosciences, Princetonlaan 8A, 3584 CB Utrecht, the Netherlands
Chantal V. Freymond
Geological Institute, ETH Zürich, Sonneggstrasse 5, 8092
Zürich, Switzerland
Timothy I. Eglinton
Geological Institute, ETH Zürich, Sonneggstrasse 5, 8092
Zürich, Switzerland
Jens Hefter
Alfred Wegener Institute, Department of Geosciences, Marine
Geochemistry, Am Handelshafen 12, Bremerhaven, Germany
Gesine Mollenhauer
Alfred Wegener Institute, Department of Geosciences, Marine
Geochemistry, Am Handelshafen 12, Bremerhaven, Germany
Sergio Balzano
NIOZ Royal Netherlands Institute for Sea Research, Department of
Marine Microbiology and Biogeochemistry, and Utrecht University, P.O. Box 59,
1790 AB Den Burg, the Netherlands
Laura Villanueva
NIOZ Royal Netherlands Institute for Sea Research, Department of
Marine Microbiology and Biogeochemistry, and Utrecht University, P.O. Box 59,
1790 AB Den Burg, the Netherlands
Marcel T. J. van der Meer
NIOZ Royal Netherlands Institute for Sea Research, Department of
Marine Microbiology and Biogeochemistry, and Utrecht University, P.O. Box 59,
1790 AB Den Burg, the Netherlands
Ellen C. Hopmans
NIOZ Royal Netherlands Institute for Sea Research, Department of
Marine Microbiology and Biogeochemistry, and Utrecht University, P.O. Box 59,
1790 AB Den Burg, the Netherlands
Jaap S. Sinninghe Damsté
NIOZ Royal Netherlands Institute for Sea Research, Department of
Marine Microbiology and Biogeochemistry, and Utrecht University, P.O. Box 59,
1790 AB Den Burg, the Netherlands
Utrecht University, Department of Earth Sciences, Faculty of
Geosciences, Princetonlaan 8A, 3584 CB Utrecht, the Netherlands
Stefan Schouten
NIOZ Royal Netherlands Institute for Sea Research, Department of
Marine Microbiology and Biogeochemistry, and Utrecht University, P.O. Box 59,
1790 AB Den Burg, the Netherlands
Utrecht University, Department of Earth Sciences, Faculty of
Geosciences, Princetonlaan 8A, 3584 CB Utrecht, the Netherlands
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Charlotte Haugk, Loeka L. Jongejans, Kai Mangelsdorf, Matthias Fuchs, Olga Ogneva, Juri Palmtag, Gesine Mollenhauer, Paul J. Mann, P. Paul Overduin, Guido Grosse, Tina Sanders, Robyn E. Tuerena, Lutz Schirrmeister, Sebastian Wetterich, Alexander Kizyakov, Cornelia Karger, and Jens Strauss
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Gerard J. M. Versteegh, Karin A. F. Zonneveld, Jens Hefter, Oscar E. Romero, Gerhard Fischer, and Gesine Mollenhauer
Biogeosciences, 19, 1587–1610, https://doi.org/10.5194/bg-19-1587-2022, https://doi.org/10.5194/bg-19-1587-2022, 2022
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Gabriella M. Weiss, Julie Lattaud, Marcel T. J. van der Meer, and Timothy I. Eglinton
Clim. Past, 18, 233–248, https://doi.org/10.5194/cp-18-233-2022, https://doi.org/10.5194/cp-18-233-2022, 2022
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Here we study the elemental signatures of plant wax compounds as well as molecules from algae and bacteria to understand how water sources changed over the last 11 000 years in the northeastern part of Europe surrounding the Baltic Sea. Our results show diversity in plant and aquatic microorganisms following the melting of the large ice sheet that covered northern Europe as the regional climate continued to warm. A shift in water source from ice melt to rain also occurred around the same time.
Blanca Ausín, Negar Haghipour, Elena Bruni, and Timothy Eglinton
Biogeosciences, 19, 613–627, https://doi.org/10.5194/bg-19-613-2022, https://doi.org/10.5194/bg-19-613-2022, 2022
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The preservation and distribution of alkenones – organic molecules produced by marine algae – in marine sediments allows us to reconstruct past variations in sea surface temperature, primary productivity and CO2. Here, we explore the impact of remobilization and lateral transport of sedimentary alkenones on their fate in marine sediments. We demonstrate the pervasive influence of these processes on alkenone-derived environmental signals, compromising the reliability of related paleorecords.
Zoë R. van Kemenade, Laura Villanueva, Ellen C. Hopmans, Peter Kraal, Harry J. Witte, Jaap S. Sinninghe Damsté, and Darci Rush
Biogeosciences, 19, 201–221, https://doi.org/10.5194/bg-19-201-2022, https://doi.org/10.5194/bg-19-201-2022, 2022
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Anaerobic ammonium oxidation (anammox) is an important nitrogen-removal process in the ocean. We assess the distribution of bacteriohopanetetrol-x (BHT-x), used to trace past anammox, along a redox gradient in the water column of the Benguela upwelling system. BHT-x / BHT ratios of >0.18 correspond to the presence of living anammox bacteria and oxygen levels <50 μmol L−1. This allows for a more robust application of BHT-x to trace past marine anammox and deoxygenation in dynamic marine systems.
Peter K. Bijl, Joost Frieling, Margot J. Cramwinckel, Christine Boschman, Appy Sluijs, and Francien Peterse
Clim. Past, 17, 2393–2425, https://doi.org/10.5194/cp-17-2393-2021, https://doi.org/10.5194/cp-17-2393-2021, 2021
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Here, we use the latest insights for GDGT and dinocyst-based paleotemperature and paleoenvironmental reconstructions in late Cretaceous–early Oligocene sediments from ODP Site 1172 (East Tasman Plateau, Australia). We reconstruct strong river runoff during the Paleocene–early Eocene, a progressive decline thereafter with increased wet/dry seasonality in the northward-drifting hinterland. Our critical review leaves the anomalous warmth of the Eocene SW Pacific Ocean unexplained.
Nele Lamping, Juliane Müller, Jens Hefter, Gesine Mollenhauer, Christian Haas, Xiaoxu Shi, Maria-Elena Vorrath, Gerrit Lohmann, and Claus-Dieter Hillenbrand
Clim. Past, 17, 2305–2326, https://doi.org/10.5194/cp-17-2305-2021, https://doi.org/10.5194/cp-17-2305-2021, 2021
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We analysed biomarker concentrations on surface sediment samples from the Antarctic continental margin. Highly branched isoprenoids and GDGTs are used for reconstructing recent sea-ice distribution patterns and ocean temperatures respectively. We compared our biomarker-based results with data obtained from satellite observations and estimated from a numerical model and find reasonable agreements. Further, we address caveats and provide recommendations for future investigations.
Caroline Welte, Jens Fohlmeister, Melina Wertnik, Lukas Wacker, Bodo Hattendorf, Timothy I. Eglinton, and Christoph Spötl
Clim. Past, 17, 2165–2177, https://doi.org/10.5194/cp-17-2165-2021, https://doi.org/10.5194/cp-17-2165-2021, 2021
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Stalagmites are valuable climate archives, but unlike other proxies the use of stable carbon isotopes (δ13C) is still difficult. A stalagmite from the Austrian Alps was analyzed using a new laser ablation method for fast radiocarbon (14C) analysis. This allowed 14C and δ13C to be combined, showing that besides soil and bedrock a third source is contributing during periods of warm, wet climate: old organic matter.
Charlotte L. Spencer-Jones, Erin L. McClymont, Nicole J. Bale, Ellen C. Hopmans, Stefan Schouten, Juliane Müller, E. Povl Abrahamsen, Claire Allen, Torsten Bickert, Claus-Dieter Hillenbrand, Elaine Mawbey, Victoria Peck, Aleksandra Svalova, and James A. Smith
Biogeosciences, 18, 3485–3504, https://doi.org/10.5194/bg-18-3485-2021, https://doi.org/10.5194/bg-18-3485-2021, 2021
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Long-term ocean temperature records are needed to fully understand the impact of West Antarctic Ice Sheet collapse. Glycerol dialkyl glycerol tetraethers (GDGTs) are powerful tools for reconstructing ocean temperature but can be difficult to apply to the Southern Ocean. Our results show active GDGT synthesis in relatively warm depths of the ocean. This research improves the application of GDGT palaeoceanographic proxies in the Southern Ocean.
Jannik Martens, Evgeny Romankevich, Igor Semiletov, Birgit Wild, Bart van Dongen, Jorien Vonk, Tommaso Tesi, Natalia Shakhova, Oleg V. Dudarev, Denis Kosmach, Alexander Vetrov, Leopold Lobkovsky, Nikolay Belyaev, Robie W. Macdonald, Anna J. Pieńkowski, Timothy I. Eglinton, Negar Haghipour, Salve Dahle, Michael L. Carroll, Emmelie K. L. Åström, Jacqueline M. Grebmeier, Lee W. Cooper, Göran Possnert, and Örjan Gustafsson
Earth Syst. Sci. Data, 13, 2561–2572, https://doi.org/10.5194/essd-13-2561-2021, https://doi.org/10.5194/essd-13-2561-2021, 2021
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The paper describes the establishment, structure and current status of the first Circum-Arctic Sediment CArbon DatabasE (CASCADE), which is a scientific effort to harmonize and curate all published and unpublished data of carbon, nitrogen, carbon isotopes, and terrigenous biomarkers in sediments of the Arctic Ocean in one database. CASCADE will enable a variety of studies of the Arctic carbon cycle and thus contribute to a better understanding of how climate change affects the Arctic.
Tessa Sophia van der Voort, Thomas Michael Blattmann, Muhammed Usman, Daniel Montluçon, Thomas Loeffler, Maria Luisa Tavagna, Nicolas Gruber, and Timothy Ian Eglinton
Earth Syst. Sci. Data, 13, 2135–2146, https://doi.org/10.5194/essd-13-2135-2021, https://doi.org/10.5194/essd-13-2135-2021, 2021
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Ocean sediments form the largest and longest-term storage of organic carbon. Despite their global importance, information on these sediments is often scattered, incomplete or inaccessible. Here we present MOSAIC (Modern Ocean Sediment Archive and Inventory of Carbon, mosaic.ethz.ch), a (radio)carbon-centric database that addresses this information gap. This database provides a platform for assessing the transport, deposition and storage of carbon in ocean surface sediments.
Cécile L. Blanchet, Rik Tjallingii, Anja M. Schleicher, Stefan Schouten, Martin Frank, and Achim Brauer
Clim. Past, 17, 1025–1050, https://doi.org/10.5194/cp-17-1025-2021, https://doi.org/10.5194/cp-17-1025-2021, 2021
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The Mediterranean Sea turned repeatedly into an oxygen-deprived basin during the geological past, as evidenced by distinct sediment layers called sapropels. We use here records of the last sapropel S1 retrieved in front of the Nile River to explore the relationships between riverine input and seawater oxygenation. We decipher the seasonal cycle of fluvial input and seawater chemistry as well as the decisive influence of primary productivity on deoxygenation at millennial timescales.
Nadine T. Smit, Laura Villanueva, Darci Rush, Fausto Grassa, Caitlyn R. Witkowski, Mira Holzheimer, Adriaan J. Minnaard, Jaap S. Sinninghe Damsté, and Stefan Schouten
Biogeosciences, 18, 1463–1479, https://doi.org/10.5194/bg-18-1463-2021, https://doi.org/10.5194/bg-18-1463-2021, 2021
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Soils from an everlasting fire (gas seep) in Sicily, Italy, reveal high relative abundances of novel uncultivated mycobacteria and unique 13C-depleted mycocerosic acids (multi-methyl branched fatty acids) close to the main gas seep. Our results imply that mycocerosic acids in combination with their depleted δ13C values offer a new biomarker tool to study the role of soil mycobacteria as hydrocarbon consumers in the modern and past global carbon cycle.
Hannah Gies, Frank Hagedorn, Maarten Lupker, Daniel Montluçon, Negar Haghipour, Tessa Sophia van der Voort, and Timothy Ian Eglinton
Biogeosciences, 18, 189–205, https://doi.org/10.5194/bg-18-189-2021, https://doi.org/10.5194/bg-18-189-2021, 2021
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Understanding controls on the persistence of organic matter in soils is essential to constrain its role in the carbon cycle. Emerging concepts suggest that the soil carbon pool is predominantly comprised of stabilized microbial residues. To test this hypothesis we isolated microbial membrane lipids from two Swiss soil profiles and measured their radiocarbon age. We find that the ages of these compounds are in the range of millenia and thus provide evidence for stabilized microbial mass in soils.
Michael Sarnthein, Kevin Küssner, Pieter M. Grootes, Blanca Ausin, Timothy Eglinton, Juan Muglia, Raimund Muscheler, and Gordon Schlolaut
Clim. Past, 16, 2547–2571, https://doi.org/10.5194/cp-16-2547-2020, https://doi.org/10.5194/cp-16-2547-2020, 2020
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The dating technique of 14C plateau tuning uses U/Th-based model ages, refinements of the Lake Suigetsu age scale, and the link of surface ocean carbon to the globally mixed atmosphere as basis of age correlation. Our synthesis employs data of 20 sediment cores from the global ocean and offers a coherent picture of global ocean circulation evolving over glacial-to-deglacial times on semi-millennial scales to be compared with climate records stored in marine sediments, ice cores, and speleothems.
Maria-Elena Vorrath, Juliane Müller, Lorena Rebolledo, Paola Cárdenas, Xiaoxu Shi, Oliver Esper, Thomas Opel, Walter Geibert, Práxedes Muñoz, Christian Haas, Gerhard Kuhn, Carina B. Lange, Gerrit Lohmann, and Gesine Mollenhauer
Clim. Past, 16, 2459–2483, https://doi.org/10.5194/cp-16-2459-2020, https://doi.org/10.5194/cp-16-2459-2020, 2020
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We tested the applicability of the organic biomarker IPSO25 for sea ice reconstructions in the industrial era at the western Antarctic Peninsula. We successfully evaluated our data with satellite sea ice observations. The comparison with marine and ice core records revealed that sea ice interpretations must consider climatic and sea ice dynamics. Sea ice biomarker production is mainly influenced by the Southern Annular Mode, while the El Niño–Southern Oscillation seems to have a minor impact.
Sebastian Wetterich, Alexander Kizyakov, Michael Fritz, Juliane Wolter, Gesine Mollenhauer, Hanno Meyer, Matthias Fuchs, Aleksei Aksenov, Heidrun Matthes, Lutz Schirrmeister, and Thomas Opel
The Cryosphere, 14, 4525–4551, https://doi.org/10.5194/tc-14-4525-2020, https://doi.org/10.5194/tc-14-4525-2020, 2020
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In the present study, we analysed geochemical and sedimentological properties of relict permafrost and ground ice exposed at the Sobo-Sise Yedoma cliff in the eastern Lena delta in NE Siberia. We obtained insight into permafrost aggradation and degradation over the last approximately 52 000 years and the climatic and morphodynamic controls on regional-scale permafrost dynamics of the central Laptev Sea coastal region.
Appy Sluijs, Joost Frieling, Gordon N. Inglis, Klaas G. J. Nierop, Francien Peterse, Francesca Sangiorgi, and Stefan Schouten
Clim. Past, 16, 2381–2400, https://doi.org/10.5194/cp-16-2381-2020, https://doi.org/10.5194/cp-16-2381-2020, 2020
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We revisit 15-year-old reconstructions of sea surface temperatures in the Arctic Ocean for the late Paleocene and early Eocene epochs (∼ 57–53 million years ago) based on the distribution of fossil membrane lipids of archaea preserved in Arctic Ocean sediments. We find that improvements in the methods over the past 15 years do not lead to different results. However, data quality is now higher and potential biases better characterized. Results confirm remarkable Arctic warmth during this time.
Loes G. J. van Bree, Francien Peterse, Allix J. Baxter, Wannes De Crop, Sigrid van Grinsven, Laura Villanueva, Dirk Verschuren, and Jaap S. Sinninghe Damsté
Biogeosciences, 17, 5443–5463, https://doi.org/10.5194/bg-17-5443-2020, https://doi.org/10.5194/bg-17-5443-2020, 2020
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Branched glycerol dialkyl glycerol tetraethers (brGDGTs) are used as a paleothermometer based on their temperature dependence in global soils, but aquatic production complicates their use in lakes. BrGDGTs in the water column of Lake Chala, East Africa, respond to oxygen conditions and mixing. Changes in their signal can be linked to bacterial community composition rather than membrane adaptation to changing conditions. Their integrated signal in the sediment reflects mean air temperature.
Bingbing Wei, Guodong Jia, Jens Hefter, Manyu Kang, Eunmi Park, Shizhu Wang, and Gesine Mollenhauer
Biogeosciences, 17, 4489–4508, https://doi.org/10.5194/bg-17-4489-2020, https://doi.org/10.5194/bg-17-4489-2020, 2020
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This research reports the applicability of four organic temperature proxies (U37K', LDI, TEX86H, and RI-OH) to the northern South China Sea shelf. The comparison with local sea surface temperature (SST) indicates the impact of terrestrial input on LDI, TEX86H, and RI-OH proxies near the coast. After excluding samples influenced by terrestrial materials, proxy temperatures exhibit different seasonality, providing valuable tools to reconstruct regional SSTs under different monsoonal conditions.
Margot J. Cramwinckel, Lineke Woelders, Emiel P. Huurdeman, Francien Peterse, Stephen J. Gallagher, Jörg Pross, Catherine E. Burgess, Gert-Jan Reichart, Appy Sluijs, and Peter K. Bijl
Clim. Past, 16, 1667–1689, https://doi.org/10.5194/cp-16-1667-2020, https://doi.org/10.5194/cp-16-1667-2020, 2020
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Phases of past transient warming can be used as a test bed to study the environmental response to climate change independent of tectonic change. Using fossil plankton and organic molecules, here we reconstruct surface ocean temperature and circulation in and around the Tasman Gateway during a warming phase 40 million years ago termed the Middle Eocene Climatic Optimum. We find that plankton assemblages track ocean circulation patterns, with superimposed variability being related to temperature.
Erin L. McClymont, Heather L. Ford, Sze Ling Ho, Julia C. Tindall, Alan M. Haywood, Montserrat Alonso-Garcia, Ian Bailey, Melissa A. Berke, Kate Littler, Molly O. Patterson, Benjamin Petrick, Francien Peterse, A. Christina Ravelo, Bjørg Risebrobakken, Stijn De Schepper, George E. A. Swann, Kaustubh Thirumalai, Jessica E. Tierney, Carolien van der Weijst, Sarah White, Ayako Abe-Ouchi, Michiel L. J. Baatsen, Esther C. Brady, Wing-Le Chan, Deepak Chandan, Ran Feng, Chuncheng Guo, Anna S. von der Heydt, Stephen Hunter, Xiangyi Li, Gerrit Lohmann, Kerim H. Nisancioglu, Bette L. Otto-Bliesner, W. Richard Peltier, Christian Stepanek, and Zhongshi Zhang
Clim. Past, 16, 1599–1615, https://doi.org/10.5194/cp-16-1599-2020, https://doi.org/10.5194/cp-16-1599-2020, 2020
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We examine the sea-surface temperature response to an interval of climate ~ 3.2 million years ago, when CO2 concentrations were similar to today and the near future. Our geological data and climate models show that global mean sea-surface temperatures were 2.3 to 3.2 ºC warmer than pre-industrial climate, that the mid-latitudes and high latitudes warmed more than the tropics, and that the warming was particularly enhanced in the North Atlantic Ocean.
Leticia G. Luz, Thiago P. Santos, Timothy I. Eglinton, Daniel Montluçon, Blanca Ausin, Negar Haghipour, Silvia M. Sousa, Renata H. Nagai, and Renato S. Carreira
Clim. Past, 16, 1245–1261, https://doi.org/10.5194/cp-16-1245-2020, https://doi.org/10.5194/cp-16-1245-2020, 2020
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Two sediment cores retrieved from the SE Brazilian continental margin were studied using multiple organic (alkenones) and inorganic (oxygen isotopes in carbonate shells and water) proxies to reconstruct the sea surface temperature (SST) over the last 50 000 years. The findings indicate the formation of strong thermal gradients in the region during the last climate transition, a feature that may become more frequent in the future scenario of global water circulation changes.
Jingjing Guo, Miriam Glendell, Jeroen Meersmans, Frédérique Kirkels, Jack J. Middelburg, and Francien Peterse
Biogeosciences, 17, 3183–3201, https://doi.org/10.5194/bg-17-3183-2020, https://doi.org/10.5194/bg-17-3183-2020, 2020
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The fluxes of soil organic carbon (OC) transport from land to sea are poorly constrained, mostly due to the lack of a specific tracer for soil OC. Here we evaluate the use of specific molecules derived from soil bacteria as a tracer for soil OC in a small river catchment. We find that the initial soil signal is lost upon entering the aquatic environment. However, the local environmental history of the catchment is reflected by these molecules in the lake sediments that act as their sink.
Elisabeth Dietze, Kai Mangelsdorf, Andrei Andreev, Cornelia Karger, Laura T. Schreuder, Ellen C. Hopmans, Oliver Rach, Dirk Sachse, Volker Wennrich, and Ulrike Herzschuh
Clim. Past, 16, 799–818, https://doi.org/10.5194/cp-16-799-2020, https://doi.org/10.5194/cp-16-799-2020, 2020
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Long-term climate change impacts on fire, vegetation and permafrost in the Arctic are uncertain. Here, we show the high potential of organic compounds from low-temperature biomass burning to serve as proxies for surface fires in lake deposits. During warm periods of the last 430 000 years, surface fires are closely linked to the larch taiga forest with its moss–lichen ground vegetation that isolates the permafrost. They have reduced in warm–wet, spruce–dominated and cool–dry steppe environments.
Emily Dearing Crampton-Flood, Lars J. Noorbergen, Damian Smits, R. Christine Boschman, Timme H. Donders, Dirk K. Munsterman, Johan ten Veen, Francien Peterse, Lucas Lourens, and Jaap S. Sinninghe Damsté
Clim. Past, 16, 523–541, https://doi.org/10.5194/cp-16-523-2020, https://doi.org/10.5194/cp-16-523-2020, 2020
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The mid-Pliocene warm period (mPWP; 3.3–3.0 million years ago) is thought to be the last geological interval with similar atmospheric carbon dioxide concentrations as the present day. Further, the mPWP was 2–3 °C warmer than present, making it a good analogue for estimating the effects of future climate change. Here, we construct a new precise age model for the North Sea during the mPWP, and provide a detailed reconstruction of terrestrial and marine climate using a multi-proxy approach.
Johannes Hepp, Imke Kathrin Schäfer, Verena Lanny, Jörg Franke, Marcel Bliedtner, Kazimierz Rozanski, Bruno Glaser, Michael Zech, Timothy Ian Eglinton, and Roland Zech
Biogeosciences, 17, 741–756, https://doi.org/10.5194/bg-17-741-2020, https://doi.org/10.5194/bg-17-741-2020, 2020
Oscar E. Romero, Karl-Heinz Baumann, Karin A. F. Zonneveld, Barbara Donner, Jens Hefter, Bambaye Hamady, Vera Pospelova, and Gerhard Fischer
Biogeosciences, 17, 187–214, https://doi.org/10.5194/bg-17-187-2020, https://doi.org/10.5194/bg-17-187-2020, 2020
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Monitoring of the multiannual evolution of populations representing different trophic levels allows for obtaining insights into the impact of climate variability in marine coastal upwelling ecosystems. By using a multiyear, continuous (1,900 d) sediment trap record, we assess the dynamics and fluxes of calcareous, organic and siliceous microorganisms off Mauritania (NW Africa). The experiment allowed for the recognition of a general sequence of seasonal variations of the main populations.
Caitlyn R. Witkowski, Sylvain Agostini, Ben P. Harvey, Marcel T. J. van der Meer, Jaap S. Sinninghe Damsté, and Stefan Schouten
Biogeosciences, 16, 4451–4461, https://doi.org/10.5194/bg-16-4451-2019, https://doi.org/10.5194/bg-16-4451-2019, 2019
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Carbon dioxide concentrations (pCO2) in the atmosphere play an integral role in Earth system dynamics, especially climate. Past climates help us understand future ones, but reconstructing pCO2 over the geologic record remains a challenge. This research demonstrates new approaches for exploring past pCO2 via the carbon isotope fractionation in general algal lipids, which we test over a high CO2 gradient from a naturally occurring CO2 seep.
Tessa Sophia van der Voort, Utsav Mannu, Frank Hagedorn, Cameron McIntyre, Lorenz Walthert, Patrick Schleppi, Negar Haghipour, and Timothy Ian Eglinton
Biogeosciences, 16, 3233–3246, https://doi.org/10.5194/bg-16-3233-2019, https://doi.org/10.5194/bg-16-3233-2019, 2019
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The carbon stored in soils is the largest reservoir of organic carbon on land. In the context of greenhouse gas emissions and a changing climate, it is very important to understand how stable the carbon in the soil is and why. The deeper parts of the soil have often been overlooked even though they store a lot of carbon. In this paper, we discovered that although deep soil carbon is expected to be old and stable, there can be a significant young component that cycles much faster.
Thomas Opel, Julian B. Murton, Sebastian Wetterich, Hanno Meyer, Kseniia Ashastina, Frank Günther, Hendrik Grotheer, Gesine Mollenhauer, Petr P. Danilov, Vasily Boeskorov, Grigoriy N. Savvinov, and Lutz Schirrmeister
Clim. Past, 15, 1443–1461, https://doi.org/10.5194/cp-15-1443-2019, https://doi.org/10.5194/cp-15-1443-2019, 2019
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To reconstruct past winter climate, we studied ice wedges at two sites in the Yana Highlands, interior Yakutia (Russia), the most continental region of the Northern Hemisphere. Our ice wedges of the upper ice complex unit of the Batagay megaslump and a river terrace show much more depleted stable-isotope compositions than other study sites in coastal and central Yakutia, reflecting lower winter temperatures and a higher continentality of the study region during Marine Isotope Stages 3 and 1.
Maria-Elena Vorrath, Juliane Müller, Oliver Esper, Gesine Mollenhauer, Christian Haas, Enno Schefuß, and Kirsten Fahl
Biogeosciences, 16, 2961–2981, https://doi.org/10.5194/bg-16-2961-2019, https://doi.org/10.5194/bg-16-2961-2019, 2019
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The study highlights new approaches in the investigation of past sea ice in Antarctica to reconstruct the climate conditions in earth's history and reveal its future development under global warming. We examined the distribution of organic remains from different algae at the Western Antarctic Peninsula and compared it to fossil and satellite records. We evaluated IPSO25 – the sea ice proxy for the Southern Ocean with 25 carbon atoms – as a useful tool for sea ice reconstructions in this region.
Charlotte Miller, Jemma Finch, Trevor Hill, Francien Peterse, Marc Humphries, Matthias Zabel, and Enno Schefuß
Clim. Past, 15, 1153–1170, https://doi.org/10.5194/cp-15-1153-2019, https://doi.org/10.5194/cp-15-1153-2019, 2019
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Here we reconstruct vegetation and precipitation, in eastern South Africa, over the last 32 000 years, by measuring the stable carbon and hydrogen isotope composition of plant waxes from Mfabeni peat bog (KwaZulu-Natal). Our results indicate that the late Quaternary climate in eastern South Africa did not respond directly to orbital forcing or to changes in sea-surface temperatures. Our findings stress the influence of the Southern Hemisphere westerlies in driving climate change in the region.
Tamara L. Fletcher, Lisa Warden, Jaap S. Sinninghe Damsté, Kendrick J. Brown, Natalia Rybczynski, John C. Gosse, and Ashley P. Ballantyne
Clim. Past, 15, 1063–1081, https://doi.org/10.5194/cp-15-1063-2019, https://doi.org/10.5194/cp-15-1063-2019, 2019
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The last time atmospheric CO2 was similar to the present was 3–4 million years ago. The Arctic was warmer compared to the global average, and the causes are not fully known. To investigate this, we reconstructed summer temperature, forest fire and vegetation at a 3.9 Ma fen peat in Arctic Canada. The summer temperatures averaged 15.4 °C, and charcoal was abundant. Interactions between vegetation and climate were mediated by fire and may contribute to high Arctic temperatures during the Pliocene.
Darci Rush, Helen M. Talbot, Marcel T. J. van der Meer, Ellen C. Hopmans, Ben Douglas, and Jaap S. Sinninghe Damsté
Biogeosciences, 16, 2467–2479, https://doi.org/10.5194/bg-16-2467-2019, https://doi.org/10.5194/bg-16-2467-2019, 2019
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Sapropels are layers of sediment that regularly occur in the Mediterranean. They indicate periods when the Mediterranean Sea water contained no oxygen, a gas vital for most large organisms. This research investigated a key process in the nitrogen cycle (anaerobic ammonium oxidation, anammox), which removes nitrogen – an important nutrient to algae – from the water, during sapropel events. Using lipids to trace this process, we found that anammox was active during the no-oxygen times.
Eunmi Park, Jens Hefter, Gerhard Fischer, Morten Hvitfeldt Iversen, Simon Ramondenc, Eva-Maria Nöthig, and Gesine Mollenhauer
Biogeosciences, 16, 2247–2268, https://doi.org/10.5194/bg-16-2247-2019, https://doi.org/10.5194/bg-16-2247-2019, 2019
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We analyzed GDGT-based proxy temperatures in the polar oceans. In the eastern Fram Strait (79° N), the nutrient distribution may determine the depth habit of Thaumarchaeota and thus the proxy temperature. In the Antarctic Polar Front (50° S), the contribution of Euryarchaeota or the nonlinear correlation between the proxy values and temperatures may cause the warm biases of the proxy temperatures relative to SSTs.
Gabriella M. Weiss, David Chivall, Sebastian Kasper, Hideto Nakamura, Fiz da Costa, Philippe Soudant, Jaap S. Sinninghe Damsté, Stefan Schouten, and Marcel T. J. van der Meer
Biogeosciences Discuss., https://doi.org/10.5194/bg-2019-147, https://doi.org/10.5194/bg-2019-147, 2019
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In this study, we used four different haptophyte species and six different organic compounds to investigate the relationship between organic matter synthesis and salinity. We showed that creation in different parts of the cell (chloroplast versus cytosol) determined which compounds retain a correlation between their hydrogen isotopes and salinity. This is important for using hydrogen isotopes to reconstruct salinity in the geologic record.
Marijke W. de Bar, Jenny E. Ullgren, Robert C. Thunnell, Stuart G. Wakeham, Geert-Jan A. Brummer, Jan-Berend W. Stuut, Jaap S. Sinninghe Damsté, and Stefan Schouten
Biogeosciences, 16, 1705–1727, https://doi.org/10.5194/bg-16-1705-2019, https://doi.org/10.5194/bg-16-1705-2019, 2019
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We analyzed sediment traps from the Cariaco Basin, the tropical Atlantic and the Mozambique Channel to evaluate seasonal imprints in the concentrations and fluxes of long-chain diols (LDIs), in addition to the long-chain diol index proxy (sea surface temperature proxy) and the diol index (upwelling indicator). Despite significant degradation, LDI-derived temperatures were very similar for the sediment traps and seafloor sediments, and corresponded to annual mean sea surface temperatures.
Marijke W. de Bar, Dave J. Stolwijk, Jerry F. McManus, Jaap S. Sinninghe Damsté, and Stefan Schouten
Clim. Past, 14, 1783–1803, https://doi.org/10.5194/cp-14-1783-2018, https://doi.org/10.5194/cp-14-1783-2018, 2018
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We present a past sea surface temperature and paleoproductivity record over the last 150 000 years for ODP Site 1234 (Chilean margin). We tested the applicability of long-chain diol proxies for the reconstrucion of SST (LDI), past upwelling conditions (diol index), and nutrient concentrations (NDI). The LDI likely reflects past temperature changes, but the diol index and NDI are perhaps more indicative of Proboscia diatom productivity rather than upwelling and/or nutrient conditions.
Loeka L. Jongejans, Jens Strauss, Josefine Lenz, Francien Peterse, Kai Mangelsdorf, Matthias Fuchs, and Guido Grosse
Biogeosciences, 15, 6033–6048, https://doi.org/10.5194/bg-15-6033-2018, https://doi.org/10.5194/bg-15-6033-2018, 2018
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Arctic warming mobilizes belowground organic matter in northern high latitudes. This study focused on the size of organic carbon pools and organic matter quality in ice-rich permafrost on the Baldwin Peninsula, West Alaska. We analyzed biogeochemistry and found that three-quarters of the carbon is stored in degraded permafrost deposits. Nonetheless, using biomarker analyses, we showed that the organic matter in undisturbed yedoma permafrost has a higher potential for decomposition.
Sergio Balzano, Julie Lattaud, Laura Villanueva, Sebastiaan W. Rampen, Corina P. D. Brussaard, Judith van Bleijswijk, Nicole Bale, Jaap S. Sinninghe Damsté, and Stefan Schouten
Biogeosciences, 15, 5951–5968, https://doi.org/10.5194/bg-15-5951-2018, https://doi.org/10.5194/bg-15-5951-2018, 2018
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We tried to identify the microbes which biosynthesize a class of lipids widespread in seawater, the long chain alkyl diols (LCDs). We could not find any microorganism likely involved in the production of LCDs. The amounts of LCDs found are too high to be produced by living organisms and are likely to be part of the refractory organic matter persisting for long periods in the water column.
Julian D. Hartman, Francesca Sangiorgi, Ariadna Salabarnada, Francien Peterse, Alexander J. P. Houben, Stefan Schouten, Henk Brinkhuis, Carlota Escutia, and Peter K. Bijl
Clim. Past, 14, 1275–1297, https://doi.org/10.5194/cp-14-1275-2018, https://doi.org/10.5194/cp-14-1275-2018, 2018
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We reconstructed sea surface temperatures for the Oligocene and Miocene periods (34–11 Ma) based on archaeal lipids from a site close to the Wilkes Land coast, Antarctica. Our record suggests generally warm to temperate surface waters: on average 17 °C. Based on the lithology, glacial and interglacial temperatures could be distinguished, showing an average 3 °C offset. The long-term temperature trend resembles the benthic δ18O stack, which may have implications for ice volume reconstructions.
Marc A. Besseling, Ellen C. Hopmans, R. Christine Boschman, Jaap S. Sinninghe Damsté, and Laura Villanueva
Biogeosciences, 15, 4047–4064, https://doi.org/10.5194/bg-15-4047-2018, https://doi.org/10.5194/bg-15-4047-2018, 2018
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Benthic archaea comprise a significant part of the total prokaryotic biomass in marine sediments. Here, we compared the archaeal diversity and intact polar lipid (IPL) composition in both surface and subsurface sediments with different oxygen regimes in the Arabian Sea oxygen minimum zone. The oxygenated sediments were dominated by Thaumarchaeota and IPL-GDGT-0. The anoxic sediment contained highly diverse archaeal communities and high relative abundances of IPL-GDGT-1 to -4.
Muhammed Ojoshogu Usman, Frédérique Marie Sophie Anne Kirkels, Huub Michel Zwart, Sayak Basu, Camilo Ponton, Thomas Michael Blattmann, Michael Ploetze, Negar Haghipour, Cameron McIntyre, Francien Peterse, Maarten Lupker, Liviu Giosan, and Timothy Ian Eglinton
Biogeosciences, 15, 3357–3375, https://doi.org/10.5194/bg-15-3357-2018, https://doi.org/10.5194/bg-15-3357-2018, 2018
Timme H. Donders, Niels A. G. M. van Helmond, Roel Verreussel, Dirk Munsterman, Johan ten Veen, Robert P. Speijer, Johan W. H. Weijers, Francesca Sangiorgi, Francien Peterse, Gert-Jan Reichart, Jaap S. Sinninghe Damsté, Lucas Lourens, Gesa Kuhlmann, and Henk Brinkhuis
Clim. Past, 14, 397–411, https://doi.org/10.5194/cp-14-397-2018, https://doi.org/10.5194/cp-14-397-2018, 2018
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The buildup and melting of ice during the early glaciations in the Northern Hemisphere, around 2.5 million years ago, were far shorter in duration than during the last million years. Based on molecular compounds and microfossils from sediments dating back to the early glaciations we show that the temperature on land and in the sea changed simultaneously and was a major factor in the ice buildup in the Northern Hemisphere. These data provide key insights into the dynamics of early glaciations.
Nicole J. Bale, Tracy A. Villareal, Ellen C. Hopmans, Corina P. D. Brussaard, Marc Besseling, Denise Dorhout, Jaap S. Sinninghe Damsté, and Stefan Schouten
Biogeosciences, 15, 1229–1241, https://doi.org/10.5194/bg-15-1229-2018, https://doi.org/10.5194/bg-15-1229-2018, 2018
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Associations between diatoms and N-fixing cyanobacteria (diatom–diazotroph associations, DDAs) play an important role in the N cycle of the tropical North Atlantic. Heterocysts are the site of N fixation and contain unique glycolipids. We measured these glycolipids in the water column and surface sediment from the tropical North Atlantic. We found a significant correlation between the concentration of glycolipid and of DDAs, strengthening their application as biomarkers.
Blanca Ausín, Diana Zúñiga, Jose A. Flores, Catarina Cavaleiro, María Froján, Nicolás Villacieros-Robineau, Fernando Alonso-Pérez, Belén Arbones, Celia Santos, Francisco de la Granda, Carmen G. Castro, Fátima Abrantes, Timothy I. Eglinton, and Emilia Salgueiro
Biogeosciences, 15, 245–262, https://doi.org/10.5194/bg-15-245-2018, https://doi.org/10.5194/bg-15-245-2018, 2018
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A systematic investigation of the coccolithophore ecology was performed for the first time in the NW Iberian Margin to broaden our knowledge on the use of fossil coccoliths in marine sediment records to infer environmental conditions in the past. Coccolithophores proved to be significant primary producers and their abundance and distribution was favoured by warmer and nutrient–depleted waters during the upwelling regime, seasonally controlled offshore and influenced by coastal processes onshore.
Martina Sollai, Ellen C. Hopmans, Nicole J. Bale, Anchelique Mets, Lisa Warden, Matthias Moros, and Jaap S. Sinninghe Damsté
Biogeosciences, 14, 5789–5804, https://doi.org/10.5194/bg-14-5789-2017, https://doi.org/10.5194/bg-14-5789-2017, 2017
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The Baltic Sea is characterized by recurring summer phytoplankton blooms, dominated by a few cyanobacterial species. These bacteria are able to use dinitrogen gas as the source for nitrogen and produce very specific lipids. We analyzed these lipids in a sediment core to study their presence over the past 7000 years. This reveals that cyanobacterial blooms have not only occurred in the last decades but were common at times when the Baltic was connected to the North Sea.
Gabriella M. Weiss, Eva Y. Pfannerstill, Stefan Schouten, Jaap S. Sinninghe Damsté, and Marcel T. J. van der Meer
Biogeosciences, 14, 5693–5704, https://doi.org/10.5194/bg-14-5693-2017, https://doi.org/10.5194/bg-14-5693-2017, 2017
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Algal-derived compounds allow us to make assumptions about environmental conditions in the past. In order to better understand how organisms record environmental conditions, we grew microscopic marine algae at different light intensities, salinities, and alkalinities in a temperature-controlled environment. We determined how these environmental parameters affected specific algal-derived compounds, especially their relative deuterium content, which seems to be mainly affected by salinity.
Liviu Giosan, Camilo Ponton, Muhammed Usman, Jerzy Blusztajn, Dorian Q. Fuller, Valier Galy, Negar Haghipour, Joel E. Johnson, Cameron McIntyre, Lukas Wacker, and Timothy I. Eglinton
Earth Surf. Dynam., 5, 781–789, https://doi.org/10.5194/esurf-5-781-2017, https://doi.org/10.5194/esurf-5-781-2017, 2017
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A reconstruction of erosion in the core monsoon zone of India provides unintuitive but fundamental insights: in contrast to semiarid regions that experience enhanced erosion during erratic rain events, the monsoon is annual and acts as a veritable
erosional pumpaccelerating when the land cover is minimal. The existence of such a monsoon erosional pump promises to reconcile conflicting views on the land–sea sediment and carbon transfer as well as the monsoon evolution on longer timescales.
Julie Lattaud, Denise Dorhout, Hartmut Schulz, Isla S. Castañeda, Enno Schefuß, Jaap S. Sinninghe Damsté, and Stefan Schouten
Clim. Past, 13, 1049–1061, https://doi.org/10.5194/cp-13-1049-2017, https://doi.org/10.5194/cp-13-1049-2017, 2017
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The study of past sedimentary records from coastal margins allows us to reconstruct variations in terrestrial input into the marine realm and to gain insight into continental climatic variability. The study of two sediment cores close to river mouths allowed us to show the potential of long-chain diols as riverine input proxy.
Annette Hahn, Enno Schefuß, Sergio Andò, Hayley C. Cawthra, Peter Frenzel, Martin Kugel, Stephanie Meschner, Gesine Mollenhauer, and Matthias Zabel
Clim. Past, 13, 649–665, https://doi.org/10.5194/cp-13-649-2017, https://doi.org/10.5194/cp-13-649-2017, 2017
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Our study demonstrates that a source to sink analysis in the Gouritz catchment can be used to obtain valuable paleoclimatic information form the year-round rainfall zone. In combination with SST reconstructions these data are a valuable contribution to the discussion of Southern Hemisphere palaeoenvironments and climate variability (in particular atmosphere–ocean circulation and hydroclimate change) in the South African Holocene.
Shuwen Sun, Enno Schefuß, Stefan Mulitza, Cristiano M. Chiessi, André O. Sawakuchi, Matthias Zabel, Paul A. Baker, Jens Hefter, and Gesine Mollenhauer
Biogeosciences, 14, 2495–2512, https://doi.org/10.5194/bg-14-2495-2017, https://doi.org/10.5194/bg-14-2495-2017, 2017
Laura F. Korte, Geert-Jan A. Brummer, Michèlle van der Does, Catarina V. Guerreiro, Rick Hennekam, Johannes A. van Hateren, Dirk Jong, Chris I. Munday, Stefan Schouten, and Jan-Berend W. Stuut
Atmos. Chem. Phys., 17, 6023–6040, https://doi.org/10.5194/acp-17-6023-2017, https://doi.org/10.5194/acp-17-6023-2017, 2017
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We collected Saharan dust at the Mauritanian coast as well as in the deep the North Atlantic Ocean, along a transect at 12 °N, using an array of moored sediment traps. We demonstrated that the lithogenic particles collected in the ocean are from the same source as dust collected on the African coast. With increasing distance from the source, lithogenic elements associated with clay minerals become more important relative to quartz which is settling out faster. Seasonality is prominent, but weak.
Vera D. Meyer, Jens Hefter, Gerrit Lohmann, Lars Max, Ralf Tiedemann, and Gesine Mollenhauer
Clim. Past, 13, 359–377, https://doi.org/10.5194/cp-13-359-2017, https://doi.org/10.5194/cp-13-359-2017, 2017
Imke K. Schäfer, Verena Lanny, Jörg Franke, Timothy I. Eglinton, Michael Zech, Barbora Vysloužilová, and Roland Zech
SOIL, 2, 551–564, https://doi.org/10.5194/soil-2-551-2016, https://doi.org/10.5194/soil-2-551-2016, 2016
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For this study we systematically investigated the molecular pattern of leaf waxes in litter and topsoils along a European transect to assess their potential for palaeoenvironmental reconstruction. Our results show that leaf wax patterns depend on the type of vegetation. The vegetation signal is not only found in the litter; it can also be preserved to some degree in the topsoil.
Robert B. Sparkes, Ayça Doğrul Selver, Örjan Gustafsson, Igor P. Semiletov, Negar Haghipour, Lukas Wacker, Timothy I. Eglinton, Helen M. Talbot, and Bart E. van Dongen
The Cryosphere, 10, 2485–2500, https://doi.org/10.5194/tc-10-2485-2016, https://doi.org/10.5194/tc-10-2485-2016, 2016
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The permafrost in eastern Siberia contains large amounts of carbon frozen in soils and sediments. Continuing global warming is thawing the permafrost and releasing carbon to the Arctic Ocean. We used pyrolysis-GCMS, a chemical fingerprinting technique, to study the types of carbon being deposited on the continental shelf. We found large amounts of permafrost-sourced carbon being deposited up to 200 km offshore.
Lisa Warden, Jung-Hyun Kim, Claudia Zell, Geert-Jan Vis, Henko de Stigter, Jérôme Bonnin, and Jaap S. Sinninghe Damsté
Biogeosciences, 13, 5719–5738, https://doi.org/10.5194/bg-13-5719-2016, https://doi.org/10.5194/bg-13-5719-2016, 2016
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Enhanced analytical techniques were applied to characterize fossilized microbial cell membrane lipids from samples in the Tagus River basin spanning the last 6000 years. Using the novel methods and calibration, the pH estimates were improved upon, and this study reveals new factors that should be considered when using this proxy as well as affirms the importance of examining the provenance of these lipids before applying them for paleoclimate reconstructions.
Sandra Mariam Heinzelmann, Nicole Jane Bale, Laura Villanueva, Danielle Sinke-Schoen, Catharina Johanna Maria Philippart, Jaap Smede Sinninghe Damsté, Stefan Schouten, and Marcel Teunis Jan van der Meer
Biogeosciences, 13, 5527–5539, https://doi.org/10.5194/bg-13-5527-2016, https://doi.org/10.5194/bg-13-5527-2016, 2016
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In order to understand microbial communities in the environment it is necessary to assess their metabolic potential. The hydrogen isotopic composition of fatty acids has been shown to be promising tool to study the general metabolism of microorganisms in pure culture. Here we showed that it is possible to study seasonal changes in the general metabolism of the whole community by studying the hydrogen isotopic composition of fatty acids.
Tessa Sophia van der Voort, Frank Hagedorn, Cameron McIntyre, Claudia Zell, Lorenz Walthert, Patrick Schleppi, Xiaojuan Feng, and Timothy Ian Eglinton
Biogeosciences, 13, 3427–3439, https://doi.org/10.5194/bg-13-3427-2016, https://doi.org/10.5194/bg-13-3427-2016, 2016
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This study explores heterogeneity in 14C content of soil organic matter (SOM) at different spatial scales and across climatic and geologic gradients, which is essential for a better understanding of SOM stability. Results reveal that despite dissimilar environmental conditions, 14C contents in topsoils is relatively uniform and 14C trends with depth are similar. Plot-scale variability is significant. Statistical analysis found a significant correlation of 14C contents (0–5 cm) and temperature.
Gerhard Fischer, Johannes Karstensen, Oscar Romero, Karl-Heinz Baumann, Barbara Donner, Jens Hefter, Gesine Mollenhauer, Morten Iversen, Björn Fiedler, Ivanice Monteiro, and Arne Körtzinger
Biogeosciences, 13, 3203–3223, https://doi.org/10.5194/bg-13-3203-2016, https://doi.org/10.5194/bg-13-3203-2016, 2016
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Particle fluxes at the Cape Verde Ocean Observatory in the eastern tropical North Atlantic for the period December 2009 until May 2011 are discussed based on deep sediment trap time-series data collected at 1290 and 3439 m water depths. The typically open-ocean flux pattern with weak seasonality is modified by the appearance of a highly productive and low oxygen eddy in winter 2010. The eddy passage was accompanied by high biogenic and lithogenic fluxes, lasting from December 2009 to May 2010.
Douwe S. Maat, Nicole J. Bale, Ellen C. Hopmans, Jaap S. Sinninghe Damsté, Stefan Schouten, and Corina P. D. Brussaard
Biogeosciences, 13, 1667–1676, https://doi.org/10.5194/bg-13-1667-2016, https://doi.org/10.5194/bg-13-1667-2016, 2016
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This study shows that the phytoplankter Micromonas pusilla alters its lipid composition when the macronutrient phosphate is in low supply. This reduction in phospholipids is directly dependent on the strength of the limitation. Furthermore we show that, when M. pusilla is infected by viruses, lipid remodeling is lower. The study was carried out to investigate how phytoplankton and its viruses are affected by environmental factors and how this affects food web dynamics.
M. Rodrigo-Gámiz, S. W. Rampen, H. de Haas, M. Baas, S. Schouten, and J. S. Sinninghe Damsté
Biogeosciences, 12, 6573–6590, https://doi.org/10.5194/bg-12-6573-2015, https://doi.org/10.5194/bg-12-6573-2015, 2015
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This research reports a test of the applicability of three organic-derived temperature proxies (UK'37, TEX86 and LDI) at high latitudes around Iceland. A range of samples including suspended particular material (SPM), trapped descending particles and surface sediments were collected to test the different proxies in the water column and the sediment.The combination of three independent SST organic proxies provided important information about seasonality and differences in habitat depth.
M. Sollai, E. C. Hopmans, S. Schouten, R. G. Keil, and J. S. Sinninghe Damsté
Biogeosciences, 12, 4725–4737, https://doi.org/10.5194/bg-12-4725-2015, https://doi.org/10.5194/bg-12-4725-2015, 2015
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The distribution of Thaumarchaeota and anammox bacteria in the water column of the eastern tropical North Pacific (ETNP) oxygen-deficient zone (ODZ) was investigated by collecting suspended particulate matter (SPM) and analyzing it for the content of specific intact polar lipids (IPLs) produced by the two microbial groups. We found a clear niche segregation in the distribution of the two groups in the coastal waters of the ETNP but a partial overlap of their niches in the open-water setting.
C. M. Chiessi, S. Mulitza, G. Mollenhauer, J. B. Silva, J. Groeneveld, and M. Prange
Clim. Past, 11, 915–929, https://doi.org/10.5194/cp-11-915-2015, https://doi.org/10.5194/cp-11-915-2015, 2015
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Here we show that temperatures in the western South Atlantic increased markedly during the major slowdown event of the Atlantic meridional overturning circulation (AMOC) of the last deglaciation. Over the adjacent continent, however, temperatures followed the rise in atmospheric carbon dioxide, lagging changes in oceanic temperature. Our records corroborate the notion that the long duration of the major slowdown event of the AMOC was fundamental in driving the Earth out of the last glacial.
M. Winterfeld, T. Laepple, and G. Mollenhauer
Biogeosciences, 12, 3769–3788, https://doi.org/10.5194/bg-12-3769-2015, https://doi.org/10.5194/bg-12-3769-2015, 2015
M. Winterfeld, M. A. Goñi, J. Just, J. Hefter, and G. Mollenhauer
Biogeosciences, 12, 2261–2283, https://doi.org/10.5194/bg-12-2261-2015, https://doi.org/10.5194/bg-12-2261-2015, 2015
C. Bottini, E. Erba, D. Tiraboschi, H. C. Jenkyns, S. Schouten, and J. S. Sinninghe Damsté
Clim. Past, 11, 383–402, https://doi.org/10.5194/cp-11-383-2015, https://doi.org/10.5194/cp-11-383-2015, 2015
F. Peterse, C. M. Moy, and T. I. Eglinton
Biogeosciences, 12, 933–943, https://doi.org/10.5194/bg-12-933-2015, https://doi.org/10.5194/bg-12-933-2015, 2015
A. de Kluijver, P. L. Schoon, J. A. Downing, S. Schouten, and J. J. Middelburg
Biogeosciences, 11, 6265–6276, https://doi.org/10.5194/bg-11-6265-2014, https://doi.org/10.5194/bg-11-6265-2014, 2014
A. Sluijs, L. van Roij, G. J. Harrington, S. Schouten, J. A. Sessa, L. J. LeVay, G.-J. Reichart, and C. P. Slomp
Clim. Past, 10, 1421–1439, https://doi.org/10.5194/cp-10-1421-2014, https://doi.org/10.5194/cp-10-1421-2014, 2014
S. Kasper, M. T. J. van der Meer, A. Mets, R. Zahn, J. S. Sinninghe Damsté, and S. Schouten
Clim. Past, 10, 251–260, https://doi.org/10.5194/cp-10-251-2014, https://doi.org/10.5194/cp-10-251-2014, 2014
S. K. Lengger, Y. A. Lipsewers, H. de Haas, J. S. Sinninghe Damsté, and S. Schouten
Biogeosciences, 11, 201–216, https://doi.org/10.5194/bg-11-201-2014, https://doi.org/10.5194/bg-11-201-2014, 2014
N. J. Bale, L. Villanueva, E. C. Hopmans, S. Schouten, and J. S. Sinninghe Damsté
Biogeosciences, 10, 7195–7206, https://doi.org/10.5194/bg-10-7195-2013, https://doi.org/10.5194/bg-10-7195-2013, 2013
Related subject area
Biogeochemistry: Organic Biogeochemistry
Latitudinal distribution of biomarkers across the western Arctic Ocean and the Bering Sea: an approach to assess sympagic and pelagic algal production
Sinking fate and carbon export of zooplankton fecal pellets: insights from time-series sediment trap observations in the northern South China Sea
Environmental controls on the brGDGT and brGMGT distributions across the Seine River basin (NW France): Implications for bacterial tetraethers as a proxy for riverine runoff
Low cobalt inventories in the Amundsen and Ross seas driven by high demand for labile cobalt uptake among native phytoplankton communities
Potential bioavailability of representative pyrogenic organic matter compounds in comparison to natural dissolved organic matter pools
Distributions of bacteriohopanepolyols in lakes and coastal lagoons of the Azores Archipelago
Recently fixed carbon fuels microbial activity several meters below the soil surface
Environmental and hydrologic controls on sediment and organic carbon export from a subalpine catchment: insights from a time series
Climate and geology overwrite land use effects on soil organic nitrogen cycling on a continental scale
Compositions of dissolved organic matter in the ice-covered waters above the Aurora hydrothermal vent system, Gakkel Ridge, Arctic Ocean
Organic matter characteristics of a rapidly eroding permafrost cliff in NE Siberia (Lena Delta, Laptev Sea region)
Microbial labilization and diversification of pyrogenic dissolved organic matter
Bacterial and eukaryotic intact polar lipids point to in situ production as a key source of labile organic matter in hadal surface sediment of the Atacama Trench
What can we learn from amino acids about oceanic organic matter cycling and degradation?
Bacteriohopanetetrol-x: constraining its application as a lipid biomarker for marine anammox using the water column oxygen gradient of the Benguela upwelling system
Active and passive fluxes of carbon, nitrogen, and phosphorus in the northern South China Sea
Cyanobacteria net community production in the Baltic Sea as inferred from profiling pCO2 measurements
Reviews and syntheses: Heterotrophic fixation of inorganic carbon – significant but invisible flux in environmental carbon cycling
Revised fractional abundances and warm-season temperatures substantially improve brGDGT calibrations in lake sediments
Archaeal intact polar lipids in polar waters: a comparison between the Amundsen and Scotia seas
Reproducible determination of dissolved organic matter photosensitivity
Technical note: Uncovering the influence of methodological variations on the extractability of iron-bound organic carbon
Anthropocene climate warming enhances autochthonous carbon cycling in an upland Arctic lake, Disko Island, West Greenland
Novel hydrocarbon-utilizing soil mycobacteria synthesize unique mycocerosic acids at a Sicilian everlasting fire
Alkenone isotopes show evidence of active carbon concentrating mechanisms in coccolithophores as aqueous carbon dioxide concentrations fall below 7 µmol L−1
Seasonal variability and sources of in situ brGDGT production in a permanently stratified African crater lake
Sediment release of dissolved organic matter to the oxygen minimum zone off Peru
Better molecular preservation of organic matter in an oxic than in a sulfidic depositional environment: evidence from Thalassiphora pelagica (Dinoflagellata, Eocene) cysts
Assessing branched tetraether lipids as tracers of soil organic carbon transport through the Carminowe Creek catchment (southwest England)
The nonconservative distribution pattern of organic matter in the Rajang, a tropical river with peatland in its estuary
Predominance of hexamethylated 6-methyl branched glycerol dialkyl glycerol tetraethers in the Mariana Trench: source and environmental implication
High-pH and anoxic conditions during soil organic matter extraction increases its electron-exchange capacity and ability to stimulate microbial Fe(III) reduction by electron shuttling
Sterol preservation in hypersaline microbial mats
Structural elucidation and environmental distributions of butanetriol and pentanetriol dialkyl glycerol tetraethers (BDGTs and PDGTs)
Distribution and degradation of terrestrial organic matter in the sediments of peat-draining rivers, Sarawak, Malaysian Borneo
Validation of carbon isotope fractionation in algal lipids as a pCO2 proxy using a natural CO2 seep (Shikine Island, Japan)
Composition and cycling of dissolved organic matter from tropical peatlands of coastal Sarawak, Borneo, revealed by fluorescence spectroscopy and parallel factor analysis
Latitudinal variations in δ30Si and δ15N signatures along the Peruvian shelf: quantifying the effects of nutrient utilization versus denitrification over the past 600 years
Diapycnal dissolved organic matter supply into the upper Peruvian oxycline
Composition and vertical flux of particulate organic matter to the oxygen minimum zone of the central Baltic Sea: impact of a sporadic North Sea inflow
Main drivers of transparent exopolymer particle distribution across the surface Atlantic Ocean
Biochemical and structural controls on the decomposition dynamics of boreal upland forest moss tissues
Spatiotemporal transformation of dissolved organic matter along an alpine stream flow path on the Qinghai–Tibet Plateau: importance of source and permafrost degradation
A quest for the biological sources of long chain alkyl diols in the western tropical North Atlantic Ocean
Leaf wax n-alkanes in modern plants and topsoils from eastern Georgia (Caucasus) – implications for reconstructing regional paleovegetation
The role of diatom resting spores in pelagic–benthic coupling in the Southern Ocean
Calcium content and high calcium adaptation of plants in karst areas of southwestern Hunan, China
Substrate potential of last interglacial to Holocene permafrost organic matter for future microbial greenhouse gas production
Variation pattern of particulate organic carbon and nitrogen in oceans and inland waters
C5 glycolipids of heterocystous cyanobacteria track symbiont abundance in the diatom Hemiaulus hauckii across the tropical North Atlantic
Youcheng Bai, Marie-Alexandrine Sicre, Jian Ren, Vincent Klein, Haiyan Jin, and Jianfang Chen
Biogeosciences, 21, 689–709, https://doi.org/10.5194/bg-21-689-2024, https://doi.org/10.5194/bg-21-689-2024, 2024
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Algal biomarkers were used to assess sea ice and pelagic algal production across the western Arctic Ocean with changing sea-ice conditions. They show three distinct areas along with a marked latitudinal gradient of sea ice over pelagic algal production in surface sediments that are reflected by the H-Print index. Our data also show that efficient grazing consumption accounted for the dramatic decrease of diatom-derived biomarkers in sediments compared to that of particulate matter.
Hanxiao Wang, Zhifei Liu, Jiaying Li, Baozhi Lin, Yulong Zhao, Xiaodong Zhang, Junyuan Cao, Jingwen Zhang, Hongzhe Song, and Wenzhuo Wang
Biogeosciences, 20, 5109–5123, https://doi.org/10.5194/bg-20-5109-2023, https://doi.org/10.5194/bg-20-5109-2023, 2023
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The sinking of zooplankton fecal pellets is a key process in the marine biological carbon pump. This study presents carbon export of four shapes of fecal pellets from two time-series sediment traps in the South China Sea. The results show that the sinking fate of fecal pellets is regulated by marine primary productivity, deep-dwelling zooplankton community, and deep-sea currents in the tropical marginal sea, thus providing a new perspective for exploring the carbon cycle in the world ocean.
Zhe-Xuan Zhang, Edith Parlanti, Christelle Anquetil, Jérôme Morelle, Anniet Laverman, Alexandre Thibault, Elisa Bou, and Arnaud Huguet
EGUsphere, https://doi.org/10.31223/X5PQ17, https://doi.org/10.31223/X5PQ17, 2023
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Bacterial tetraethers have important implications for palaeoclimate reconstruction. However, fundamental understanding of how these lipids are transformed from land to sea and which environmental factors influence their distributions is lacking. Here, we investigate the sources of brGDGTs and brGMGTs and the factors controlling their distributions in a large dataset (n=237). We propose a novel proxy to trace riverine runoff, which is applicable in modern systems and in paleorecord.
Rebecca J. Chmiel, Riss M. Kell, Deepa Rao, Dawn M. Moran, Giacomo R. DiTullio, and Mak A. Saito
Biogeosciences, 20, 3997–4027, https://doi.org/10.5194/bg-20-3997-2023, https://doi.org/10.5194/bg-20-3997-2023, 2023
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Cobalt is an important micronutrient for plankton, yet it is often scarce throughout the oceans. A 2017/2018 expedition to coastal Antarctica, including regions of the Amundsen Sea and the Ross Sea, discovered lower concentrations of cobalt compared to two past expeditions in 2005 and 2006, particularly for the type of cobalt preferred as a nutrient by phytoplankton. This loss may be due to changing inputs of other nutrients, causing higher uptake of cobalt by plankton over the last decade.
Emily B. Graham, Hyun-Seob Song, Samantha Grieger, Vanessa A. Garayburu-Caruso, James C. Stegen, Kevin D. Bladon, and Allison N. Myers-Pigg
Biogeosciences, 20, 3449–3457, https://doi.org/10.5194/bg-20-3449-2023, https://doi.org/10.5194/bg-20-3449-2023, 2023
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Intensifying wildfires are increasing pyrogenic organic matter (PyOM) production and its impact on water quality. Recent work indicates that PyOM may have a greater impact on aquatic biogeochemistry than previously assumed, driven by higher bioavailability. We provide a full assessment of the potential bioavailability of PyOM across its chemical spectrum. We indicate that PyOM can be actively transformed within the river corridor and, therefore, may be a growing source of riverine C emissions.
Nora Richter, Ellen C. Hopmans, Danica Mitrović, Pedro M. Raposeiro, Vítor Gonçalves, Ana C. Costa, Linda A. Amaral-Zettler, Laura Villanueva, and Darci Rush
Biogeosciences, 20, 2065–2098, https://doi.org/10.5194/bg-20-2065-2023, https://doi.org/10.5194/bg-20-2065-2023, 2023
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Bacteriohopanepolyols (BHPs) are a diverse class of lipids produced by bacteria across a wide range of environments. This study characterizes the diversity of BHPs in lakes and coastal lagoons in the Azores Archipelago, as well as a co-culture enriched for methanotrophs. We highlight the potential of BHPs as taxonomic markers for bacteria associated with certain ecological niches, which can be preserved in sedimentary records.
Andrea Scheibe, Carlos A. Sierra, and Marie Spohn
Biogeosciences, 20, 827–838, https://doi.org/10.5194/bg-20-827-2023, https://doi.org/10.5194/bg-20-827-2023, 2023
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We explored carbon cycling in soils in three climate zones in Chile down to a depth of 6 m, using carbon isotopes. Our results show that microbial activity several meters below the soil surface is mostly fueled by recently fixed carbon and that strong decomposition of soil organic matter only occurs in the upper decimeters of the soils. The study shows that different layers of the critical zone are tightly connected and that processes in the deep soil depend on recently fixed carbon.
Melissa Sophia Schwab, Hannah Gies, Chantal Valérie Freymond, Maarten Lupker, Negar Haghipour, and Timothy Ian Eglinton
Biogeosciences, 19, 5591–5616, https://doi.org/10.5194/bg-19-5591-2022, https://doi.org/10.5194/bg-19-5591-2022, 2022
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The majority of river studies focus on headwater or floodplain systems, while often neglecting intermediate river segments. Our study on the subalpine Sihl River bridges the gap between streams and lowlands and demonstrates that moderately steep river segments are areas of significant instream alterations, modulating the export of organic carbon over short distances.
Lisa Noll, Shasha Zhang, Qing Zheng, Yuntao Hu, Florian Hofhansl, and Wolfgang Wanek
Biogeosciences, 19, 5419–5433, https://doi.org/10.5194/bg-19-5419-2022, https://doi.org/10.5194/bg-19-5419-2022, 2022
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Cleavage of proteins to smaller nitrogen compounds allows microorganisms and plants to exploit the largest nitrogen reservoir in soils and is considered the bottleneck in soil organic nitrogen cycling. Results from soils covering a European transect show that protein turnover is constrained by soil geochemistry, shifts in climate and associated alterations in soil weathering and should be considered as a driver of soil nitrogen availability with repercussions on carbon cycle processes.
Muhammed Fatih Sert, Helge Niemann, Eoghan P. Reeves, Mats A. Granskog, Kevin P. Hand, Timo Kekäläinen, Janne Jänis, Pamela E. Rossel, Bénédicte Ferré, Anna Silyakova, and Friederike Gründger
Biogeosciences, 19, 2101–2120, https://doi.org/10.5194/bg-19-2101-2022, https://doi.org/10.5194/bg-19-2101-2022, 2022
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We investigate organic matter composition in the Arctic Ocean water column. We collected seawater samples from sea ice to deep waters at six vertical profiles near an active hydrothermal vent and its plume. In comparison to seawater, we found that the organic matter in waters directly affected by the hydrothermal plume had different chemical composition. We suggest that hydrothermal processes may influence the organic matter distribution in the deep ocean.
Charlotte Haugk, Loeka L. Jongejans, Kai Mangelsdorf, Matthias Fuchs, Olga Ogneva, Juri Palmtag, Gesine Mollenhauer, Paul J. Mann, P. Paul Overduin, Guido Grosse, Tina Sanders, Robyn E. Tuerena, Lutz Schirrmeister, Sebastian Wetterich, Alexander Kizyakov, Cornelia Karger, and Jens Strauss
Biogeosciences, 19, 2079–2094, https://doi.org/10.5194/bg-19-2079-2022, https://doi.org/10.5194/bg-19-2079-2022, 2022
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Buried animal and plant remains (carbon) from the last ice age were freeze-locked in permafrost. At an extremely fast eroding permafrost cliff in the Lena Delta (Siberia), we found this formerly frozen carbon well preserved. Our results show that ongoing degradation releases substantial amounts of this carbon, making it available for future carbon emissions. This mobilisation at the studied cliff and also similarly eroding sites bear the potential to affect rivers and oceans negatively.
Aleksandar I. Goranov, Andrew S. Wozniak, Kyle W. Bostick, Andrew R. Zimmerman, Siddhartha Mitra, and Patrick G. Hatcher
Biogeosciences, 19, 1491–1514, https://doi.org/10.5194/bg-19-1491-2022, https://doi.org/10.5194/bg-19-1491-2022, 2022
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Wildfire-derived molecules are ubiquitous in the aquatic environment, but their biological fate remains understudied. We have evaluated the compositional changes that occur to wildfire-derived molecules after incubation with soil microbes. We observe a significant degradation but also a production of numerous new labile molecules. Our results indicate that wildfire-derived molecules can be broken down and the carbon and nitrogen therein can be incorporated into microbial food webs.
Edgart Flores, Sebastian I. Cantarero, Paula Ruiz-Fernández, Nadia Dildar, Matthias Zabel, Osvaldo Ulloa, and Julio Sepúlveda
Biogeosciences, 19, 1395–1420, https://doi.org/10.5194/bg-19-1395-2022, https://doi.org/10.5194/bg-19-1395-2022, 2022
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In this study, we investigate the chemical diversity and abundance of microbial lipids as markers of organic matter sources in the deepest points of the Atacama Trench sediments and compare them to similar lipid stocks in shallower surface sediments and in the overlying water column. We evaluate possible organic matter provenance and some potential chemical adaptations of the in situ microbial community to the extreme conditions of high hydrostatic pressure in hadal realm.
Birgit Gaye, Niko Lahajnar, Natalie Harms, Sophie Anna Luise Paul, Tim Rixen, and Kay-Christian Emeis
Biogeosciences, 19, 807–830, https://doi.org/10.5194/bg-19-807-2022, https://doi.org/10.5194/bg-19-807-2022, 2022
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Amino acids were analyzed in a large number of samples of particulate and dissolved organic matter from coastal regions and the open ocean. A statistical analysis produced two new biogeochemical indicators. An indicator of sinking particle and sediment degradation (SDI) traces the degradation of organic matter from the surface waters into the sediments. A second indicator shows the residence time of suspended matter in the ocean (RTI).
Zoë R. van Kemenade, Laura Villanueva, Ellen C. Hopmans, Peter Kraal, Harry J. Witte, Jaap S. Sinninghe Damsté, and Darci Rush
Biogeosciences, 19, 201–221, https://doi.org/10.5194/bg-19-201-2022, https://doi.org/10.5194/bg-19-201-2022, 2022
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Anaerobic ammonium oxidation (anammox) is an important nitrogen-removal process in the ocean. We assess the distribution of bacteriohopanetetrol-x (BHT-x), used to trace past anammox, along a redox gradient in the water column of the Benguela upwelling system. BHT-x / BHT ratios of >0.18 correspond to the presence of living anammox bacteria and oxygen levels <50 μmol L−1. This allows for a more robust application of BHT-x to trace past marine anammox and deoxygenation in dynamic marine systems.
Jia-Jang Hung, Ching-Han Tung, Zong-Ying Lin, Yuh-ling Lee Chen, Shao-Hung Peng, Yen-Huei Lin, and Li-Shan Tsai
Biogeosciences, 18, 5141–5162, https://doi.org/10.5194/bg-18-5141-2021, https://doi.org/10.5194/bg-18-5141-2021, 2021
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We report measured active and passive fluxes and their controlling mechanisms in the northern South China Sea (NSCS). The total fluxes were higher than most reports in open oceans, indicating the significance of NSCS in atmospheric CO2 uptake and in storing that CO2 in the ocean’s interior. Winter cooling and extreme events enhanced nutrient availability and elevated fluxes. Global warming may have profound impacts on reducing ocean’s uptake and storage of CO2 in subtropical–tropical oceans.
Jens Daniel Müller, Bernd Schneider, Ulf Gräwe, Peer Fietzek, Marcus Bo Wallin, Anna Rutgersson, Norbert Wasmund, Siegfried Krüger, and Gregor Rehder
Biogeosciences, 18, 4889–4917, https://doi.org/10.5194/bg-18-4889-2021, https://doi.org/10.5194/bg-18-4889-2021, 2021
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Based on profiling pCO2 measurements from a field campaign, we quantify the biomass production of a cyanobacteria bloom in the Baltic Sea, the export of which would foster deep water deoxygenation. We further demonstrate how this biomass production can be accurately reconstructed from long-term surface measurements made on cargo vessels in combination with modelled temperature profiles. This approach enables a better understanding of a severe concern for the Baltic’s good environmental status.
Alexander Braun, Marina Spona-Friedl, Maria Avramov, Martin Elsner, Federico Baltar, Thomas Reinthaler, Gerhard J. Herndl, and Christian Griebler
Biogeosciences, 18, 3689–3700, https://doi.org/10.5194/bg-18-3689-2021, https://doi.org/10.5194/bg-18-3689-2021, 2021
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It is known that CO2 fixation by photoautotrophic organisms is the major sink from the atmosphere. While biologists are aware that CO2 fixation also occurs in heterotrophic organisms, this route of inorganic carbon, and its quantitative role, is hardly recognized in biogeochemistry. We demonstrate that a considerable amount of CO2 is fixed annually through anaplerotic reactions in heterotrophic organisms, and a significant quantity of inorganic carbon is temporally sequestered in biomass.
Jonathan H. Raberg, David J. Harning, Sarah E. Crump, Greg de Wet, Aria Blumm, Sebastian Kopf, Áslaug Geirsdóttir, Gifford H. Miller, and Julio Sepúlveda
Biogeosciences, 18, 3579–3603, https://doi.org/10.5194/bg-18-3579-2021, https://doi.org/10.5194/bg-18-3579-2021, 2021
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BrGDGT lipids are a proxy for temperature in lake sediments, but other parameters like pH can influence them, and seasonality can affect the temperatures they record. We find a warm-season bias at 43 new high-latitude sites. We also present a new method that deconvolves the effects of temperature, pH, and conductivity and generate global calibrations for these variables. Our study provides new paleoclimate tools, insight into brGDGTs at the biochemical level, and a new method for future study.
Charlotte L. Spencer-Jones, Erin L. McClymont, Nicole J. Bale, Ellen C. Hopmans, Stefan Schouten, Juliane Müller, E. Povl Abrahamsen, Claire Allen, Torsten Bickert, Claus-Dieter Hillenbrand, Elaine Mawbey, Victoria Peck, Aleksandra Svalova, and James A. Smith
Biogeosciences, 18, 3485–3504, https://doi.org/10.5194/bg-18-3485-2021, https://doi.org/10.5194/bg-18-3485-2021, 2021
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Long-term ocean temperature records are needed to fully understand the impact of West Antarctic Ice Sheet collapse. Glycerol dialkyl glycerol tetraethers (GDGTs) are powerful tools for reconstructing ocean temperature but can be difficult to apply to the Southern Ocean. Our results show active GDGT synthesis in relatively warm depths of the ocean. This research improves the application of GDGT palaeoceanographic proxies in the Southern Ocean.
Alec W. Armstrong, Leanne Powers, and Michael Gonsior
Biogeosciences, 18, 3367–3390, https://doi.org/10.5194/bg-18-3367-2021, https://doi.org/10.5194/bg-18-3367-2021, 2021
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Living things decay into organic matter, which can dissolve into water (like tea brewing). Tea receives its color by absorbing light. Similarly, this material absorbs light, which can then cause chemical reactions that change it. By measuring changes in these optical properties, we found that materials from some places are more sensitive to light than others. Comparing sensitivity to light helps us understand where these materials come from and what happens as they move through water.
Ben J. Fisher, Johan C. Faust, Oliver W. Moore, Caroline L. Peacock, and Christian März
Biogeosciences, 18, 3409–3419, https://doi.org/10.5194/bg-18-3409-2021, https://doi.org/10.5194/bg-18-3409-2021, 2021
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Organic carbon can be protected from microbial degradation in marine sediments through association with iron minerals on 1000-year timescales. Despite the importance of this carbon sink, our spatial and temporal understanding of iron-bound organic carbon interactions globally is poor. Here we show that caution must be applied when comparing quantification of iron-bound organic carbon extracted by different methods as the extraction strength and method specificity can be highly variable.
Mark A. Stevenson, Suzanne McGowan, Emma J. Pearson, George E. A. Swann, Melanie J. Leng, Vivienne J. Jones, Joseph J. Bailey, Xianyu Huang, and Erika Whiteford
Biogeosciences, 18, 2465–2485, https://doi.org/10.5194/bg-18-2465-2021, https://doi.org/10.5194/bg-18-2465-2021, 2021
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We link detailed stable isotope and biomarker analyses from the catchments of three Arctic upland lakes on Disko Island (West Greenland) to a recent dated sediment core to understand how carbon cycling has changed over the past ~500 years. We find that the carbon deposited in sediments in these upland lakes is predominately sourced from in-lake production due to the catchment's limited terrestrial vegetation and elevation and that recent increases in algal production link with climate change.
Nadine T. Smit, Laura Villanueva, Darci Rush, Fausto Grassa, Caitlyn R. Witkowski, Mira Holzheimer, Adriaan J. Minnaard, Jaap S. Sinninghe Damsté, and Stefan Schouten
Biogeosciences, 18, 1463–1479, https://doi.org/10.5194/bg-18-1463-2021, https://doi.org/10.5194/bg-18-1463-2021, 2021
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Soils from an everlasting fire (gas seep) in Sicily, Italy, reveal high relative abundances of novel uncultivated mycobacteria and unique 13C-depleted mycocerosic acids (multi-methyl branched fatty acids) close to the main gas seep. Our results imply that mycocerosic acids in combination with their depleted δ13C values offer a new biomarker tool to study the role of soil mycobacteria as hydrocarbon consumers in the modern and past global carbon cycle.
Marcus P. S. Badger
Biogeosciences, 18, 1149–1160, https://doi.org/10.5194/bg-18-1149-2021, https://doi.org/10.5194/bg-18-1149-2021, 2021
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Reconstructing ancient atmospheric CO2 is an important aim of palaeoclimate science in order to understand the Earth's climate system. One method, the alkenone proxy based on molecular fossils of coccolithophores, has been recently shown to be ineffective at low-to-moderate CO2 levels. In this paper I show that this is likely due to changes in the biogeochemistry of the coccolithophores when there is low carbon availability, but for much of the Cenozoic the alkenone proxy should have utility.
Loes G. J. van Bree, Francien Peterse, Allix J. Baxter, Wannes De Crop, Sigrid van Grinsven, Laura Villanueva, Dirk Verschuren, and Jaap S. Sinninghe Damsté
Biogeosciences, 17, 5443–5463, https://doi.org/10.5194/bg-17-5443-2020, https://doi.org/10.5194/bg-17-5443-2020, 2020
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Branched glycerol dialkyl glycerol tetraethers (brGDGTs) are used as a paleothermometer based on their temperature dependence in global soils, but aquatic production complicates their use in lakes. BrGDGTs in the water column of Lake Chala, East Africa, respond to oxygen conditions and mixing. Changes in their signal can be linked to bacterial community composition rather than membrane adaptation to changing conditions. Their integrated signal in the sediment reflects mean air temperature.
Alexandra N. Loginova, Andrew W. Dale, Frédéric A. C. Le Moigne, Sören Thomsen, Stefan Sommer, David Clemens, Klaus Wallmann, and Anja Engel
Biogeosciences, 17, 4663–4679, https://doi.org/10.5194/bg-17-4663-2020, https://doi.org/10.5194/bg-17-4663-2020, 2020
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We measured dissolved organic carbon (DOC), nitrogen (DON) and matter (DOM) optical properties in pore waters and near-bottom waters of the eastern tropical South Pacific off Peru. The difference between diffusion-driven and net fluxes of DOC and DON and qualitative changes in DOM optical properties suggested active microbial utilisation of the released DOM at the sediment–water interface. Our results suggest that the sediment release of DOM contributes to microbial processes in the area.
Gerard J. M. Versteegh, Alexander J. P. Houben, and Karin A. F. Zonneveld
Biogeosciences, 17, 3545–3561, https://doi.org/10.5194/bg-17-3545-2020, https://doi.org/10.5194/bg-17-3545-2020, 2020
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Anoxic sediments mostly contain much more organic matter than oxic ones, and therefore organic matter in anoxic settings is often considered to be preserved better than in oxic settings. However, through the analysis of the same fossil dinoflagellate cyst species from both oxic and anoxic settings, we show that at a molecular level the preservation in the oxic sediments may be better since in the anoxic setting the cyst macromolecule has been altered by postdepositional modification.
Jingjing Guo, Miriam Glendell, Jeroen Meersmans, Frédérique Kirkels, Jack J. Middelburg, and Francien Peterse
Biogeosciences, 17, 3183–3201, https://doi.org/10.5194/bg-17-3183-2020, https://doi.org/10.5194/bg-17-3183-2020, 2020
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The fluxes of soil organic carbon (OC) transport from land to sea are poorly constrained, mostly due to the lack of a specific tracer for soil OC. Here we evaluate the use of specific molecules derived from soil bacteria as a tracer for soil OC in a small river catchment. We find that the initial soil signal is lost upon entering the aquatic environment. However, the local environmental history of the catchment is reflected by these molecules in the lake sediments that act as their sink.
Zhuo-Yi Zhu, Joanne Oakes, Bradley Eyre, Youyou Hao, Edwin Sien Aun Sia, Shan Jiang, Moritz Müller, and Jing Zhang
Biogeosciences, 17, 2473–2485, https://doi.org/10.5194/bg-17-2473-2020, https://doi.org/10.5194/bg-17-2473-2020, 2020
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Samples were collected in August 2016 in the Rajang River and its estuary, with tropical forest in the river basin and peatland in the estuary. Organic matter composition was influenced by transportation in the river basin, whereas peatland added clear biodegraded parts to the fluvial organic matter, which implies modification of the initial lability and/or starting points in the subsequent degradation and alternation processes after the organic matter enters the sea.
Wenjie Xiao, Yasong Wang, Yongsheng Liu, Xi Zhang, Linlin Shi, and Yunping Xu
Biogeosciences, 17, 2135–2148, https://doi.org/10.5194/bg-17-2135-2020, https://doi.org/10.5194/bg-17-2135-2020, 2020
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The hadal zone (6–11 km depth) is the least explored habitat on Earth. We studied microbial branched glycerol dialkyl glycerol tetraethers (brGDGTs) in the Challenger Deep, Mariana Trench. One unique feature is the strong predominance of 6-methyl brGDGT, which likely reflects an adaption of brGDGT-producing bacteria to alkaline seawater and low temperature. BrGDGTs, with elemental and isotopic data, suggest an autochthonous product for brGDGT. A new approach is proposed for brGDGT sourcing.
Yuge Bai, Edisson Subdiaga, Stefan B. Haderlein, Heike Knicker, and Andreas Kappler
Biogeosciences, 17, 683–698, https://doi.org/10.5194/bg-17-683-2020, https://doi.org/10.5194/bg-17-683-2020, 2020
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Biogeochemical processes of SOM are key for greenhouse gas emission and water quality. We extracted SOM by water or by NaOH–HCl under oxic–anoxic conditions. Chemical and anoxic extractions lead to higher SOM electron exchange capacities, resulting in stimulation of microbial Fe(III) reduction. Therefore, aqueous pH-neutral SOM extracts should be used to reflect environmental SOM redox processes, and artifacts of chemical extractions need to be considered when evaluating SOM redox processes.
Yan Shen, Volker Thiel, Pablo Suarez-Gonzalez, Sebastiaan W. Rampen, and Joachim Reitner
Biogeosciences, 17, 649–666, https://doi.org/10.5194/bg-17-649-2020, https://doi.org/10.5194/bg-17-649-2020, 2020
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Today, sterols are widespread in plants, animals, and fungi but are almost absent in the oldest rocks. Microbial mats, representing the earliest complex ecosystems on Earth, were omnipresent in Precambrian marine environments and may have degraded the sterols at that time. Here we analyze the distribution of sterols through a microbial mat. This provides insight into how variations in biological and nonbiological factors affect the preservation of sterols in modern and ancient microbial mats.
Sarah Coffinet, Travis B. Meador, Lukas Mühlena, Kevin W. Becker, Jan Schröder, Qing-Zeng Zhu, Julius S. Lipp, Verena B. Heuer, Matthew P. Crump, and Kai-Uwe Hinrichs
Biogeosciences, 17, 317–330, https://doi.org/10.5194/bg-17-317-2020, https://doi.org/10.5194/bg-17-317-2020, 2020
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This study deals with two membrane lipids called BDGTs and PDGTs. Membrane lipids are molecules forming the cell envelope of all organisms. Different organisms produce different lipids thus they can be used to detect the presence of specific organisms in the environment. We analyzed the structure of these new lipids and looked for potential producers. We found that they are likely made by microbes emitting methane below the sediment surface and could be used to track these specific microbes.
Ying Wu, Kun Zhu, Jing Zhang, Moritz Müller, Shan Jiang, Aazani Mujahid, Mohd Fakharuddin Muhamad, and Edwin Sien Aun Sia
Biogeosciences, 16, 4517–4533, https://doi.org/10.5194/bg-16-4517-2019, https://doi.org/10.5194/bg-16-4517-2019, 2019
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Our understanding of terrestrial organic matter (TOM) in tropical peat-draining rivers remains limited, especially in Southeast Asia. We explored the characteristics of TOM via bulk parameters and lignin phenols of sediment in Malaysia. This showed that the most important plant source of the organic matter in these rivers is woody angiosperm C3 plants with limited diagenetic alteration. This slower degradation of TOM may be a link to higher total nitrogen content, especially for the small river.
Caitlyn R. Witkowski, Sylvain Agostini, Ben P. Harvey, Marcel T. J. van der Meer, Jaap S. Sinninghe Damsté, and Stefan Schouten
Biogeosciences, 16, 4451–4461, https://doi.org/10.5194/bg-16-4451-2019, https://doi.org/10.5194/bg-16-4451-2019, 2019
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Carbon dioxide concentrations (pCO2) in the atmosphere play an integral role in Earth system dynamics, especially climate. Past climates help us understand future ones, but reconstructing pCO2 over the geologic record remains a challenge. This research demonstrates new approaches for exploring past pCO2 via the carbon isotope fractionation in general algal lipids, which we test over a high CO2 gradient from a naturally occurring CO2 seep.
Yongli Zhou, Patrick Martin, and Moritz Müller
Biogeosciences, 16, 2733–2749, https://doi.org/10.5194/bg-16-2733-2019, https://doi.org/10.5194/bg-16-2733-2019, 2019
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We found that peatlands in coastal Sarawak, Borneo, export extremely humified organic matter, which dominates the riverine organic matter pool and conservatively mixes with seawater, while the freshly produced fraction is low and stable in concentration at all salinities. We estimated that terrigenous fractions, which showed high photolability, still account for 20 % of the coastal dissolved organic carbon pool, implying the importance of peat-derived organic matter in the coastal carbon cycle.
Kristin Doering, Claudia Ehlert, Philippe Martinez, Martin Frank, and Ralph Schneider
Biogeosciences, 16, 2163–2180, https://doi.org/10.5194/bg-16-2163-2019, https://doi.org/10.5194/bg-16-2163-2019, 2019
Alexandra N. Loginova, Sören Thomsen, Marcus Dengler, Jan Lüdke, and Anja Engel
Biogeosciences, 16, 2033–2047, https://doi.org/10.5194/bg-16-2033-2019, https://doi.org/10.5194/bg-16-2033-2019, 2019
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High primary production in the Peruvian upwelling system is followed by rapid heterotrophic utilization of organic matter and supports the formation of one of the most intense oxygen minimum zones (OMZs) in the world. Here, we estimated vertical fluxes of oxygen and dissolved organic matter (DOM) from the surface to the OMZ. Our results suggest that DOM remineralization substantially reduces oxygen concentration in the upper water column and controls the shape of the upper oxycline.
Carolina Cisternas-Novoa, Frédéric A. C. Le Moigne, and Anja Engel
Biogeosciences, 16, 927–947, https://doi.org/10.5194/bg-16-927-2019, https://doi.org/10.5194/bg-16-927-2019, 2019
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We investigate the composition and vertical fluxes of POM in two deep basins of the Baltic Sea (GB: Gotland Basin and LD: Landsort Deep). The two basins showed different O2 regimes resulting from the intrusion of oxygen-rich water from the North Sea that ventilated the deep waters in GB, but not in LD.
In GB, O2 intrusions lead to a high abundance of manganese oxides that aggregate with POM, altering its composition and vertical flux and contributing to a higher POC transfer efficiency in GB.
Marina Zamanillo, Eva Ortega-Retuerta, Sdena Nunes, Pablo Rodríguez-Ros, Manuel Dall'Osto, Marta Estrada, Maria Montserrat Sala, and Rafel Simó
Biogeosciences, 16, 733–749, https://doi.org/10.5194/bg-16-733-2019, https://doi.org/10.5194/bg-16-733-2019, 2019
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Many marine microorganisms produce polysaccharide-rich transparent exopolymer particles (TEPs) for rather unknown reasons but with important consequences for the ocean carbon cycle, sea–air gas exchange and formation of organic aerosols. Here we compare surface–ocean distributions of TEPs and physical, chemical and biological variables along a N–S transect in the Atlantic Ocean. Our data suggest that phytoplankton and not bacteria are the main TEP producers, and solar radiation acts as a sink.
Michael Philben, Sara Butler, Sharon A. Billings, Ronald Benner, Kate A. Edwards, and Susan E. Ziegler
Biogeosciences, 15, 6731–6746, https://doi.org/10.5194/bg-15-6731-2018, https://doi.org/10.5194/bg-15-6731-2018, 2018
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We explored the relationship between chemical composition and the temperature sensitivity of moss decomposition using 959-day lab incubations. Mass loss was low despite the predominance of carbohydrates, indicating the persistence of labile C. Scanning electron microscopy revealed little change in the moss cell-wall structure. These results suggest that the moss cell-wall matrix protects labile C from decomposition, contributing to the globally important stocks of moss-derived C.
Yinghui Wang, Robert G. M. Spencer, David C. Podgorski, Anne M. Kellerman, Harunur Rashid, Phoebe Zito, Wenjie Xiao, Dandan Wei, Yuanhe Yang, and Yunping Xu
Biogeosciences, 15, 6637–6648, https://doi.org/10.5194/bg-15-6637-2018, https://doi.org/10.5194/bg-15-6637-2018, 2018
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With global warming, thawing of permafrost releases dissolved organic matter (DOM) into streams. By analyzing DOM along an alpine stream on the Qinghai–Tibet Plateau, we found DOM was mainly from the active layer, but with deepening of the active layer, the contribution of the deep permafrost layer increased, causing a change in the chemical composition of DOM. From the head- to downstream, DOM is undergoing rapid degradation, but some components are persistent and can be transported downstream.
Sergio Balzano, Julie Lattaud, Laura Villanueva, Sebastiaan W. Rampen, Corina P. D. Brussaard, Judith van Bleijswijk, Nicole Bale, Jaap S. Sinninghe Damsté, and Stefan Schouten
Biogeosciences, 15, 5951–5968, https://doi.org/10.5194/bg-15-5951-2018, https://doi.org/10.5194/bg-15-5951-2018, 2018
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We tried to identify the microbes which biosynthesize a class of lipids widespread in seawater, the long chain alkyl diols (LCDs). We could not find any microorganism likely involved in the production of LCDs. The amounts of LCDs found are too high to be produced by living organisms and are likely to be part of the refractory organic matter persisting for long periods in the water column.
Marcel Bliedtner, Imke K. Schäfer, Roland Zech, and Hans von Suchodoletz
Biogeosciences, 15, 3927–3936, https://doi.org/10.5194/bg-15-3927-2018, https://doi.org/10.5194/bg-15-3927-2018, 2018
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In this study, we systematically analyze leaf wax derived n-alkane patterns in eastern Georgia to test their potential for paleoenvironmental reconstructions in the semi-humid to semi-arid central southern Caucasus region. We investigated the influence of vegetation types on the leaf wax signal in modern plants and topsoil material. Our results show distinct and systematic differences in the n-alkane patterns between vegetation types and prove their potential for vegetation reconstructions.
Mathieu Rembauville, Stéphane Blain, Clara Manno, Geraint Tarling, Anu Thompson, George Wolff, and Ian Salter
Biogeosciences, 15, 3071–3084, https://doi.org/10.5194/bg-15-3071-2018, https://doi.org/10.5194/bg-15-3071-2018, 2018
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Sinking phytoplankton from the surface ocean provide the principal energy source to deep-ocean ecosystems. Our aim was to understand how different phytoplankton communities impact the chemical nature of this sinking material. We show certain types of phytoplankton can preferentially export energy-rich storage compounds to the seafloor. Any climate-driven effects on phytoplankton community structure could thus impact remote deep-ocean ecosystems thousands of kilometres beneath the surface.
Xiaocong Wei, Xiangwen Deng, Wenhua Xiang, Pifeng Lei, Shuai Ouyang, Hongfang Wen, and Liang Chen
Biogeosciences, 15, 2991–3002, https://doi.org/10.5194/bg-15-2991-2018, https://doi.org/10.5194/bg-15-2991-2018, 2018
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Karst is a kind of typical calcium-rich environment, which is widely distributed. We measured the Ca2+ content of 41 plant species, as well as soil total Ca2+ and exchange Ca2+. We found out that different plants have different ways to high Ca2+ adaptation. According to the different high Ca2+ adaptation of the 17 dominant species, we divided them into 3 categories: Ca-indifferent plants, high-Ca plants and low-Ca plants. Our results can provide a theoretical basis for vegetation restoration.
Janina G. Stapel, Georg Schwamborn, Lutz Schirrmeister, Brian Horsfield, and Kai Mangelsdorf
Biogeosciences, 15, 1969–1985, https://doi.org/10.5194/bg-15-1969-2018, https://doi.org/10.5194/bg-15-1969-2018, 2018
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Climate warming in the Arctic results in thawing of permafrost deposits. This promotes the accessibility of freeze-locked old organic matter (OM) accumulated during the past. Characterizing OM of different depositional ages, we were able to show that OM from last glacial Yedoma deposits possess the highest potential to provide organic substrates such as acetate for microbial greenhouse gas production and therefore to accelerate the carbon–climate feedback cycle during ongoing global warming.
Changchun Huang, Quanliang Jiang, Ling Yao, Hao Yang, Chen Lin, Tao Huang, A-Xing Zhu, and Yimin Zhang
Biogeosciences, 15, 1827–1841, https://doi.org/10.5194/bg-15-1827-2018, https://doi.org/10.5194/bg-15-1827-2018, 2018
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The latitudinal dependency of POC / PON in ocean and inland water is significant, regulated by trophic state and climate, etc. factors. POC / PON significantly increased from coastal water (6.89 ± 2.38) to open ocean (7.59 ± 4.22) with the increasing rate of 0.0024 / km. The re-examination of the global relationship between, and variations in, POC and PON could be important for the global and regional coupling between the carbon and nitrogen cycles in the ocean and freshwater.
Nicole J. Bale, Tracy A. Villareal, Ellen C. Hopmans, Corina P. D. Brussaard, Marc Besseling, Denise Dorhout, Jaap S. Sinninghe Damsté, and Stefan Schouten
Biogeosciences, 15, 1229–1241, https://doi.org/10.5194/bg-15-1229-2018, https://doi.org/10.5194/bg-15-1229-2018, 2018
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Associations between diatoms and N-fixing cyanobacteria (diatom–diazotroph associations, DDAs) play an important role in the N cycle of the tropical North Atlantic. Heterocysts are the site of N fixation and contain unique glycolipids. We measured these glycolipids in the water column and surface sediment from the tropical North Atlantic. We found a significant correlation between the concentration of glycolipid and of DDAs, strengthening their application as biomarkers.
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Short summary
Long-chain diols (LCDs) are biomarkers that occur widespread in marine environments and also in lakes and rivers. In this study, we looked at the distribution of LCDs in three river systems (Godavari, Danube, and Rhine) in relation to season, precipitation, and temperature. We found out that the LCDs are likely being produced in calm areas of the river systems and that marine LCDs have a different distribution than riverine LCDs.
Long-chain diols (LCDs) are biomarkers that occur widespread in marine environments and also in...
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