Articles | Volume 18, issue 8
https://doi.org/10.5194/bg-18-2465-2021
© Author(s) 2021. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/bg-18-2465-2021
© Author(s) 2021. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Research article
| 
19 Apr 2021
Research article |
| 19 Apr 2021
| 19 Apr 2021
Anthropocene climate warming enhances autochthonous carbon cycling in an upland Arctic lake, Disko Island, West Greenland
Mark A. Stevenson
CORRESPONDING AUTHOR
Centre for Environmental Geochemistry, School of Geography, University
of Nottingham, University Park, Nottingham, NG7 2RD, UK
School of Natural and Environmental Sciences, Newcastle University,
Newcastle-upon-Tyne, NE1 7RU, UK
Present address: School of Natural and Environmental Sciences,
Newcastle University, Newcastle-upon-Tyne, NE1 7RU, UK
Suzanne McGowan
Centre for Environmental Geochemistry, School of Geography, University
of Nottingham, University Park, Nottingham, NG7 2RD, UK
Emma J. Pearson
School of Geography, Politics and Sociology, Newcastle University,
Newcastle-upon-Tyne, NE1 7RU, UK
George E. A. Swann
Centre for Environmental Geochemistry, School of Geography, University
of Nottingham, University Park, Nottingham, NG7 2RD, UK
Melanie J. Leng
National Environmental Isotope Facility, British Geological Survey,
Keyworth, Nottingham, NG12 5GG, UK
Centre for Environmental Geochemistry, School of Biosciences,
University of Nottingham, Sutton Bonington Campus, Leicestershire, LE12 5RD,
UK
Vivienne J. Jones
Environmental Change Research Centre, Department of Geography,
University College London, London, WC1E 6BT, UK
Joseph J. Bailey
Centre for Environmental Geochemistry, School of Geography, University
of Nottingham, University Park, Nottingham, NG7 2RD, UK
Geography Department, York St John University, YO31 7EX, York, UK
Present address: Geography Department, York St John University, YO31
7EX, York, UK
Xianyu Huang
State Key Laboratory of Biogeology and Environmental Geology and
School of Geography and Information Engineering, China University of
Geosciences, Wuhan 430078, China
Erika Whiteford
Department of Geography, Loughborough University, Loughborough, LE11
3TU, UK
School of Science and Technology, Nottingham Trent University,
Nottingham, NG11 8NS, UK
Present address: School of Science and Technology, Nottingham Trent
University, Nottingham, NG11 8NS, UK
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EGUsphere, https://doi.org/10.5194/egusphere-2024-3686, https://doi.org/10.5194/egusphere-2024-3686, 2024
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We presents the first coupled record of radiolarian silicon isotopes (δ30Sirad) from paired water column and surface sediment samples in the South China Sea. No significant discrepancies in δ30Sirad values were observed between plankton and sediment samples, implying a minimal impact of dissolution on δ30Sirad during deposition of radiolarian shells. This demonstrates the faithful preservation of the δ30Sirad signature and its potential for studying past changes in the marine silicon cycle.
Jack T. R. Wilkin, Sev Kender, Rowan Dejardin, Claire S. Allen, Victoria L. Peck, George E. A. Swann, Erin L. McClymont, James D. Scourse, Kate Littler, and Melanie J. Leng
J. Micropalaeontol., 43, 165–186, https://doi.org/10.5194/jm-43-165-2024, https://doi.org/10.5194/jm-43-165-2024, 2024
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Philip Meister, Anne Alexandre, Hannah Bailey, Philip Barker, Boris K. Biskaborn, Ellie Broadman, Rosine Cartier, Bernhard Chapligin, Martine Couapel, Jonathan R. Dean, Bernhard Diekmann, Poppy Harding, Andrew C. G. Henderson, Armand Hernandez, Ulrike Herzschuh, Svetlana S. Kostrova, Jack Lacey, Melanie J. Leng, Andreas Lücke, Anson W. Mackay, Eniko Katalin Magyari, Biljana Narancic, Cécile Porchier, Gunhild Rosqvist, Aldo Shemesh, Corinne Sonzogni, George E. A. Swann, Florence Sylvestre, and Hanno Meyer
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This paper presents the first comprehensive compilation of diatom oxygen isotope records in lake sediments (δ18OBSi), supported by lake basin parameters. We infer the spatial and temporal coverage of δ18OBSi records and discuss common hemispheric trends on centennial and millennial timescales. Key results are common patterns for hydrologically open lakes in Northern Hemisphere extratropical regions during the Holocene corresponding to known climatic epochs, i.e. the Holocene Thermal Maximum.
Stephen P. Hesselbo, Aisha Al-Suwaidi, Sarah J. Baker, Giorgia Ballabio, Claire M. Belcher, Andrew Bond, Ian Boomer, Remco Bos, Christian J. Bjerrum, Kara Bogus, Richard Boyle, James V. Browning, Alan R. Butcher, Daniel J. Condon, Philip Copestake, Stuart Daines, Christopher Dalby, Magret Damaschke, Susana E. Damborenea, Jean-Francois Deconinck, Alexander J. Dickson, Isabel M. Fendley, Calum P. Fox, Angela Fraguas, Joost Frieling, Thomas A. Gibson, Tianchen He, Kat Hickey, Linda A. Hinnov, Teuntje P. Hollaar, Chunju Huang, Alexander J. L. Hudson, Hugh C. Jenkyns, Erdem Idiz, Mengjie Jiang, Wout Krijgsman, Christoph Korte, Melanie J. Leng, Timothy M. Lenton, Katharina Leu, Crispin T. S. Little, Conall MacNiocaill, Miguel O. Manceñido, Tamsin A. Mather, Emanuela Mattioli, Kenneth G. Miller, Robert J. Newton, Kevin N. Page, József Pálfy, Gregory Pieńkowski, Richard J. Porter, Simon W. Poulton, Alberto C. Riccardi, James B. Riding, Ailsa Roper, Micha Ruhl, Ricardo L. Silva, Marisa S. Storm, Guillaume Suan, Dominika Szűcs, Nicolas Thibault, Alfred Uchman, James N. Stanley, Clemens V. Ullmann, Bas van de Schootbrugge, Madeleine L. Vickers, Sonja Wadas, Jessica H. Whiteside, Paul B. Wignall, Thomas Wonik, Weimu Xu, Christian Zeeden, and Ke Zhao
Sci. Dril., 32, 1–25, https://doi.org/10.5194/sd-32-1-2023, https://doi.org/10.5194/sd-32-1-2023, 2023
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We present initial results from a 650 m long core of Late Triasssic to Early Jurassic (190–202 Myr) sedimentary strata from the Cheshire Basin, UK, which is shown to be an exceptional record of Earth evolution for the time of break-up of the supercontinent Pangaea. Further work will determine periodic changes in depositional environments caused by solar system dynamics and used to reconstruct orbital history.
Gilles Reverdin, Claire Waelbroeck, Catherine Pierre, Camille Akhoudas, Giovanni Aloisi, Marion Benetti, Bernard Bourlès, Magnus Danielsen, Jérôme Demange, Denis Diverrès, Jean-Claude Gascard, Marie-Noëlle Houssais, Hervé Le Goff, Pascale Lherminier, Claire Lo Monaco, Herlé Mercier, Nicolas Metzl, Simon Morisset, Aïcha Naamar, Thierry Reynaud, Jean-Baptiste Sallée, Virginie Thierry, Susan E. Hartman, Edward W. Mawji, Solveig Olafsdottir, Torsten Kanzow, Anton Velo, Antje Voelker, Igor Yashayaev, F. Alexander Haumann, Melanie J. Leng, Carol Arrowsmith, and Michael Meredith
Earth Syst. Sci. Data, 14, 2721–2735, https://doi.org/10.5194/essd-14-2721-2022, https://doi.org/10.5194/essd-14-2721-2022, 2022
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The CISE-LOCEAN seawater stable isotope dataset has close to 8000 data entries. The δ18O and δD isotopic data measured at LOCEAN have uncertainties of at most 0.05 ‰ and 0.25 ‰, respectively. Some data were adjusted to correct for evaporation. The internal consistency indicates that the data can be used to investigate time and space variability to within 0.03 ‰ and 0.15 ‰ in δ18O–δD17; comparisons with data analyzed in other institutions suggest larger differences with other datasets.
Andrew L. A. Johnson, Annemarie M. Valentine, Bernd R. Schöne, Melanie J. Leng, and Stijn Goolaerts
Clim. Past, 18, 1203–1229, https://doi.org/10.5194/cp-18-1203-2022, https://doi.org/10.5194/cp-18-1203-2022, 2022
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Determining seasonal temperatures demands proxies that record the highest and lowest temperatures over the annual cycle. Many record neither, but oxygen isotope profiles from shells in principle record both. Oxygen isotope data from late Pliocene bivalve molluscs of the southern North Sea basin show that the seasonal temperature range was at times much higher than previously estimated and higher than now. This suggests reduced oceanic heat supply, in contrast to some previous interpretations.
Anson W. Mackay, Vivian A. Felde, David W. Morley, Natalia Piotrowska, Patrick Rioual, Alistair W. R. Seddon, and George E. A. Swann
Clim. Past, 18, 363–380, https://doi.org/10.5194/cp-18-363-2022, https://doi.org/10.5194/cp-18-363-2022, 2022
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We investigated the diversity of algae called diatoms in Lake Baikal, the oldest and deepest lake in the world, because algae sit at the base of aquatic foodwebs and provide energy (in the form of primary production) for other organisms to use. Diatom diversity and primary production have been influenced by both long-term and abrupt climate change over the past 16 000 years. The shape of these responses appears to be time-period specific.
Erin L. McClymont, Heather L. Ford, Sze Ling Ho, Julia C. Tindall, Alan M. Haywood, Montserrat Alonso-Garcia, Ian Bailey, Melissa A. Berke, Kate Littler, Molly O. Patterson, Benjamin Petrick, Francien Peterse, A. Christina Ravelo, Bjørg Risebrobakken, Stijn De Schepper, George E. A. Swann, Kaustubh Thirumalai, Jessica E. Tierney, Carolien van der Weijst, Sarah White, Ayako Abe-Ouchi, Michiel L. J. Baatsen, Esther C. Brady, Wing-Le Chan, Deepak Chandan, Ran Feng, Chuncheng Guo, Anna S. von der Heydt, Stephen Hunter, Xiangyi Li, Gerrit Lohmann, Kerim H. Nisancioglu, Bette L. Otto-Bliesner, W. Richard Peltier, Christian Stepanek, and Zhongshi Zhang
Clim. Past, 16, 1599–1615, https://doi.org/10.5194/cp-16-1599-2020, https://doi.org/10.5194/cp-16-1599-2020, 2020
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We examine the sea-surface temperature response to an interval of climate ~ 3.2 million years ago, when CO2 concentrations were similar to today and the near future. Our geological data and climate models show that global mean sea-surface temperatures were 2.3 to 3.2 ºC warmer than pre-industrial climate, that the mid-latitudes and high latitudes warmed more than the tropics, and that the warming was particularly enhanced in the North Atlantic Ocean.
Hannah K. Donald, Gavin L. Foster, Nico Fröhberg, George E. A. Swann, Alex J. Poulton, C. Mark Moore, and Matthew P. Humphreys
Biogeosciences, 17, 2825–2837, https://doi.org/10.5194/bg-17-2825-2020, https://doi.org/10.5194/bg-17-2825-2020, 2020
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The boron isotope pH proxy is increasingly being used to reconstruct ocean pH in the past. Here we detail a novel analytical methodology for measuring the boron isotopic composition (δ11B) of diatom opal and apply this to the study of the diatom Thalassiosira weissflogii grown in culture over a range of pH. To our knowledge this is the first study of its kind and provides unique insights into the way in which diatoms incorporate boron and their potential as archives of palaeoclimate records.
James M. Russell, Philip Barker, Andrew Cohen, Sarah Ivory, Ishmael Kimirei, Christine Lane, Melanie Leng, Neema Maganza, Michael McGlue, Emma Msaky, Anders Noren, Lisa Park Boush, Walter Salzburger, Christopher Scholz, Ralph Tiedemann, Shaidu Nuru, and the Lake Tanganyika Scientific Drilling Project (TSDP) Consortium
Sci. Dril., 27, 53–60, https://doi.org/10.5194/sd-27-53-2020, https://doi.org/10.5194/sd-27-53-2020, 2020
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Our planet experienced enormous environmental changes in the last 10 million years. Lake Tanganyika is the oldest lake in Africa and its sediments comprise the most continuous terrestrial environmental record for this time period in the tropics. This workshop report identifies key research objectives in rift processes, evolutionary biology, geomicrobiology, paleoclimatology, paleoecology, paleoanthropology, and geochronology that could be addressed by drilling this globally important site.
Anna Mikis, Katharine R. Hendry, Jennifer Pike, Daniela N. Schmidt, Kirsty M. Edgar, Victoria Peck, Frank J. C. Peeters, Melanie J. Leng, Michael P. Meredith, Chloe L. C. Jones, Sharon Stammerjohn, and Hugh Ducklow
Biogeosciences, 16, 3267–3282, https://doi.org/10.5194/bg-16-3267-2019, https://doi.org/10.5194/bg-16-3267-2019, 2019
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Antarctic marine calcifying organisms are threatened by regional climate change and ocean acidification. Future projections of regional carbonate production are challenging due to the lack of historical data combined with complex climate variability. We present a 6-year record of flux, morphology and geochemistry of an Antarctic planktonic foraminifera, which shows that their growth is most sensitive to sea ice dynamics and is linked with the El Niño–Southern Oscillation.
Elizabeth Atar, Christian März, Andrew C. Aplin, Olaf Dellwig, Liam G. Herringshaw, Violaine Lamoureux-Var, Melanie J. Leng, Bernhard Schnetger, and Thomas Wagner
Clim. Past, 15, 1581–1601, https://doi.org/10.5194/cp-15-1581-2019, https://doi.org/10.5194/cp-15-1581-2019, 2019
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We present a geochemical and petrographic study of the Kimmeridge Clay Formation from the Cleveland Basin (Yorkshire, UK). Our results indicate that deposition during this interval was very dynamic and oscillated between three distinct modes of sedimentation. In line with recent modelling results, we propose that these highly dynamic conditions were driven by changes in climate, which affected continental weathering, enhanced primary productivity, and led to organic carbon enrichment.
Tom Dunkley Jones, Hayley R. Manners, Murray Hoggett, Sandra Kirtland Turner, Thomas Westerhold, Melanie J. Leng, Richard D. Pancost, Andy Ridgwell, Laia Alegret, Rob Duller, and Stephen T. Grimes
Clim. Past, 14, 1035–1049, https://doi.org/10.5194/cp-14-1035-2018, https://doi.org/10.5194/cp-14-1035-2018, 2018
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The Paleocene–Eocene Thermal Maximum (PETM) is a transient global warming event associated with a doubling of atmospheric carbon dioxide concentrations. Here we document a major increase in sediment accumulation rates on a subtropical continental margin during the PETM, likely due to marked changes in hydro-climates and sediment transport. These high sedimentation rates persist through the event and may play a key role in the removal of carbon from the atmosphere by the burial of organic carbon.
Chris J. Curtis, Jan Kaiser, Alina Marca, N. John Anderson, Gavin Simpson, Vivienne Jones, and Erika Whiteford
Biogeosciences, 15, 529–550, https://doi.org/10.5194/bg-15-529-2018, https://doi.org/10.5194/bg-15-529-2018, 2018
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Few studies have investigated the atmospheric deposition of nitrate in the Arctic or its impacts on Arctic ecosystems. We collected late-season snowpack from three regions in western Greenland from the coast to the edge of the ice sheet. We found major differences in nitrate concentrations (lower at the coast) and deposition load (higher). Nitrate in snowpack undergoes losses and isotopic enrichment which are greatest in inland areas; hence deposition impacts may be greatest at the coast.
Rowan Dejardin, Sev Kender, Claire S. Allen, Melanie J. Leng, George E. A. Swann, and Victoria L. Peck
J. Micropalaeontol., 37, 25–71, https://doi.org/10.5194/jm-37-25-2018, https://doi.org/10.5194/jm-37-25-2018, 2018
Bernd Wagner, Thomas Wilke, Alexander Francke, Christian Albrecht, Henrike Baumgarten, Adele Bertini, Nathalie Combourieu-Nebout, Aleksandra Cvetkoska, Michele D'Addabbo, Timme H. Donders, Kirstin Föller, Biagio Giaccio, Andon Grazhdani, Torsten Hauffe, Jens Holtvoeth, Sebastien Joannin, Elena Jovanovska, Janna Just, Katerina Kouli, Andreas Koutsodendris, Sebastian Krastel, Jack H. Lacey, Niklas Leicher, Melanie J. Leng, Zlatko Levkov, Katja Lindhorst, Alessia Masi, Anna M. Mercuri, Sebastien Nomade, Norbert Nowaczyk, Konstantinos Panagiotopoulos, Odile Peyron, Jane M. Reed, Eleonora Regattieri, Laura Sadori, Leonardo Sagnotti, Björn Stelbrink, Roberto Sulpizio, Slavica Tofilovska, Paola Torri, Hendrik Vogel, Thomas Wagner, Friederike Wagner-Cremer, George A. Wolff, Thomas Wonik, Giovanni Zanchetta, and Xiaosen S. Zhang
Biogeosciences, 14, 2033–2054, https://doi.org/10.5194/bg-14-2033-2017, https://doi.org/10.5194/bg-14-2033-2017, 2017
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Lake Ohrid is considered to be the oldest existing lake in Europe. Moreover, it has a very high degree of endemic biodiversity. During a drilling campaign at Lake Ohrid in 2013, a 569 m long sediment sequence was recovered from Lake Ohrid. The ongoing studies of this record provide first important information on the environmental and evolutionary history of the lake and the reasons for its high endimic biodiversity.
Jack H. Lacey, Melanie J. Leng, Alexander Francke, Hilary J. Sloane, Antoni Milodowski, Hendrik Vogel, Henrike Baumgarten, Giovanni Zanchetta, and Bernd Wagner
Biogeosciences, 13, 1801–1820, https://doi.org/10.5194/bg-13-1801-2016, https://doi.org/10.5194/bg-13-1801-2016, 2016
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We use stable isotope data from carbonates to provide a palaeoenvironmental reconstruction covering the last 637 kyr at Lake Ohrid (FYROM/Albania). Our results indicate a relatively stable climate until 450 ka, wetter climate conditions at 400–250 ka, and a transition to a drier climate after 250 ka. This work emphasises the importance of Lake Ohrid as a valuable archive of climate change in the northern Mediterranean region.
V. N. Panizzo, G. E. A. Swann, A. W. Mackay, E. Vologina, M. Sturm, V. Pashley, and M. S. A. Horstwood
Biogeosciences, 13, 147–157, https://doi.org/10.5194/bg-13-147-2016, https://doi.org/10.5194/bg-13-147-2016, 2016
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Lake Baikal, Siberia, is the world's most voluminous lake. Diatoms are the most dominant primary producers in the lake and form the basis of the food chain. This paper investigated the productivity of these organisms over the course of a year with a view to understanding their preservation in sediments and their value for reconstructing past productivity in the lake. This is important when recent climate change and the pressures of pollution are having demonstrable impacts in the region.
K. R. Hendry, G. E. A. Swann, M. J. Leng, H. J. Sloane, C. Goodwin, J. Berman, and M. Maldonado
Biogeosciences, 12, 3489–3498, https://doi.org/10.5194/bg-12-3489-2015, https://doi.org/10.5194/bg-12-3489-2015, 2015
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The stable isotope composition of benthic sponge silica skeletons (spicules) has been shown to be a source of useful palaeoceanographic information about past deep seawater chemistry. Here, we investigate the biological vital effects on silica stable isotope composition in a Southern Ocean carnivorous sponge, Asbestopluma sp. We find significant variations in isotopic composition within the specimen – in both silicon and oxygen isotopes – that appear to be related to unusual spicule growth.
G. E. A. Swann and A. M. Snelling
Clim. Past, 11, 15–25, https://doi.org/10.5194/cp-11-15-2015, https://doi.org/10.5194/cp-11-15-2015, 2015
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New diatom isotope records are presented alongside existing geochemical and isotope records to document changes in the photic zone, including nutrient supply and the efficiency of the soft-tissue biological pump, between MIS 4 and MIS 5e in the subarctic north-west Pacific Ocean. The results provide evidence for temporal changes in the strength and efficiency of the regional soft-tissue biological pump, altering the ratio of regenerated to preformed nutrients in the water.
A. M. Snelling, G. E. A. Swann, J. Pike, and M. J. Leng
Clim. Past, 10, 1837–1842, https://doi.org/10.5194/cp-10-1837-2014, https://doi.org/10.5194/cp-10-1837-2014, 2014
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Biogeosciences, 21, 5457–5479, https://doi.org/10.5194/bg-21-5457-2024, https://doi.org/10.5194/bg-21-5457-2024, 2024
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Colleen L. Hoffman, Patrick J. Monreal, Justine B. Albers, Alastair J. M. Lough, Alyson E. Santoro, Travis Mellett, Kristen N. Buck, Alessandro Tagliabue, Maeve C. Lohan, Joseph A. Resing, and Randelle M. Bundy
Biogeosciences, 21, 5233–5246, https://doi.org/10.5194/bg-21-5233-2024, https://doi.org/10.5194/bg-21-5233-2024, 2024
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Hydrothermally derived iron can be transported kilometers away from deep-sea vents, representing a significant flux of vital micronutrients to the ocean. However, the mechanisms that support the stabilization of dissolved iron remain elusive. Using electrochemical, spectrometry, and genomic methods, we demonstrated that strong ligands exert an important control on iron in plumes, and high-affinity iron-binding siderophores were identified in several hydrothermal plume samples for the first time.
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Biogeosciences, 21, 5131–5141, https://doi.org/10.5194/bg-21-5131-2024, https://doi.org/10.5194/bg-21-5131-2024, 2024
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Ocean liming is a technique proposed to mitigate ocean acidification. Every action we take has an impact on the environment and the effects on the invisible world are often overlooked. With this study, we show that lime addition impacts the dynamics of dissolved organic matter, one of the largest reservoirs of carbon on Earth, representing the main source of energy for marine microbes. Further studies to assess the impacts on marine ecosystems are therefore crucial before taking any action.
Mak A. Saito, Jaclyn K. Saunders, Matthew R. McIlvin, Erin M. Bertrand, John A. Breier, Margaret Mars Brisbin, Sophie M. Colston, Jaimee R. Compton, Tim J. Griffin, W. Judson Hervey, Robert L. Hettich, Pratik D. Jagtap, Michael Janech, Rod Johnson, Rick Keil, Hugo Kleikamp, Dagmar Leary, Lennart Martens, J. Scott P. McCain, Eli Moore, Subina Mehta, Dawn M. Moran, Jaqui Neibauer, Benjamin A. Neely, Michael V. Jakuba, Jim Johnson, Megan Duffy, Gerhard J. Herndl, Richard Giannone, Ryan Mueller, Brook L. Nunn, Martin Pabst, Samantha Peters, Andrew Rajczewski, Elden Rowland, Brian Searle, Tim Van Den Bossche, Gary J. Vora, Jacob R. Waldbauer, Haiyan Zheng, and Zihao Zhao
Biogeosciences, 21, 4889–4908, https://doi.org/10.5194/bg-21-4889-2024, https://doi.org/10.5194/bg-21-4889-2024, 2024
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The ability to assess the functional capabilities of microbes in the environment is of increasing interest. Metaproteomics, the ability to measure proteins across microbial populations, has been increasing in capability and popularity in recent years. Here, an international team of scientists conducted an intercomparison study using samples collected from the North Atlantic Ocean and observed consistency in the peptides and proteins identified, their functions, and their taxonomic origins.
Devika Varma, Laura Villanueva, Nicole J. Bale, Pierre Offre, Gert-Jan Reichart, and Stefan Schouten
Biogeosciences, 21, 4875–4888, https://doi.org/10.5194/bg-21-4875-2024, https://doi.org/10.5194/bg-21-4875-2024, 2024
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Archaeal hydroxylated tetraether lipids are increasingly used as temperature indicators in marine settings, but the factors influencing their distribution are still unclear. Analyzing membrane lipids of two thaumarchaeotal strains showed that the growth phase of the cultures does not affect the lipid distribution, but growth temperature profoundly affects the degree of cyclization of these lipids. Also, the abundance of these lipids is species-specific and is not influenced by temperature.
William Kew, Allison Myers-Pigg, Christine H. Chang, Sean M. Colby, Josie Eder, Malak M. Tfaily, Jeffrey Hawkes, Rosalie K. Chu, and James C. Stegen
Biogeosciences, 21, 4665–4679, https://doi.org/10.5194/bg-21-4665-2024, https://doi.org/10.5194/bg-21-4665-2024, 2024
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Natural organic matter (NOM) is often studied via Fourier transform mass spectrometry (FTMS), which identifies organic molecules as mass spectra peaks. The intensity of peaks is data that is often discarded due to technical concerns. We review the theory behind these concerns and show they are supported empirically. However, simulations show that ecological analyses of NOM data that include FTMS peak intensities are often valid. This opens a path for robust use of FTMS peak intensities for NOM.
Adam J. Fagan, Tatsuro Tanioka, Alyse A. Larkin, Jenna A. Lee, Nathan S. Garcia, and Adam C. Martiny
Biogeosciences, 21, 4239–4250, https://doi.org/10.5194/bg-21-4239-2024, https://doi.org/10.5194/bg-21-4239-2024, 2024
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Climate change is anticipated to influence the biological pump by altering phytoplankton nutrient distribution. In our research, we collected measurements of particulate matter concentrations during two oceanographic field studies. We observed systematic variations in organic matter concentrations and ratios across the Atlantic Ocean. From statistical modeling, we determined that these variations are associated with differences in the availability of essential nutrients for phytoplankton growth.
Sebastian I. Cantarero, Edgart Flores, Harry Allbrook, Paulina Aguayo, Cristian A. Vargas, John E. Tamanaha, J. Bentley C. Scholz, Lennart T. Bach, Carolin R. Löscher, Ulf Riebesell, Balaji Rajagopalan, Nadia Dildar, and Julio Sepúlveda
Biogeosciences, 21, 3927–3958, https://doi.org/10.5194/bg-21-3927-2024, https://doi.org/10.5194/bg-21-3927-2024, 2024
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Our study explores lipid remodeling in response to environmental stress, specifically how cell membrane chemistry changes. We focus on intact polar lipids in a phytoplankton community exposed to diverse stressors in a mesocosm experiment. The observed remodeling indicates acyl chain recycling for energy storage in intact polar lipids during stress, reallocating resources based on varying growth conditions. This understanding is essential to grasp the system's impact on cellular pools.
Mengke Wang, Peng Zhang, Huishan Li, Guisen Deng, Deliang Kong, Sifang Kong, and Junjian Wang
Biogeosciences, 21, 2691–2704, https://doi.org/10.5194/bg-21-2691-2024, https://doi.org/10.5194/bg-21-2691-2024, 2024
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We developed and applied complementary analyses to characterize molecular-level carbon traits for water-grown and soil-grown fine roots. The adaptive strategy of developing more labile carbon in water-grown roots accelerated root decomposition and counteracted the decelerated effects of anoxia on decomposition, highlighting an indirect effect of environmental change on belowground carbon cycling.
Maria G. Digernes, Yasemin V. Bodur, Martí Amargant-Arumí, Oliver Müller, Jeffrey A. Hawkes, Stephen G. Kohler, Ulrike Dietrich, Marit Reigstad, and Maria Lund Paulsen
EGUsphere, https://doi.org/10.5194/egusphere-2024-1314, https://doi.org/10.5194/egusphere-2024-1314, 2024
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Dissolved (DOM) and particulate organic matter (POM) are in constant exchange, but usually studied as distinct entities. We investigated the dynamics between POM and DOM in a sub-Arctic fjord across different seasons by conducting bi-monthly aggregation-dissolution experiments. During the productive period, POM concentrations increased in the experiment while DOM molecules became more recalcitrant. During the winter period, POM concentrations decreased whereas DOM molecules became more labile.
Zhe-Xuan Zhang, Edith Parlanti, Christelle Anquetil, Jérôme Morelle, Anniet M. Laverman, Alexandre Thibault, Elisa Bou, and Arnaud Huguet
Biogeosciences, 21, 2227–2252, https://doi.org/10.5194/bg-21-2227-2024, https://doi.org/10.5194/bg-21-2227-2024, 2024
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Bacterial tetraethers have important implications for palaeoclimate reconstruction. However, fundamental understanding of how these lipids are transformed from land to sea and which environmental factors influence their distributions is lacking. Here, we investigate the sources of brGDGTs and brGMGTs and the factors controlling their distributions in a large dataset (n=237). We propose a novel proxy (RIX) to trace riverine runoff, which is applicable in modern systems and in paleorecord.
Youcheng Bai, Marie-Alexandrine Sicre, Jian Ren, Vincent Klein, Haiyan Jin, and Jianfang Chen
Biogeosciences, 21, 689–709, https://doi.org/10.5194/bg-21-689-2024, https://doi.org/10.5194/bg-21-689-2024, 2024
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Algal biomarkers were used to assess sea ice and pelagic algal production across the western Arctic Ocean with changing sea-ice conditions. They show three distinct areas along with a marked latitudinal gradient of sea ice over pelagic algal production in surface sediments that are reflected by the H-Print index. Our data also show that efficient grazing consumption accounted for the dramatic decrease of diatom-derived biomarkers in sediments compared to that of particulate matter.
Hanxiao Wang, Zhifei Liu, Jiaying Li, Baozhi Lin, Yulong Zhao, Xiaodong Zhang, Junyuan Cao, Jingwen Zhang, Hongzhe Song, and Wenzhuo Wang
Biogeosciences, 20, 5109–5123, https://doi.org/10.5194/bg-20-5109-2023, https://doi.org/10.5194/bg-20-5109-2023, 2023
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The sinking of zooplankton fecal pellets is a key process in the marine biological carbon pump. This study presents carbon export of four shapes of fecal pellets from two time-series sediment traps in the South China Sea. The results show that the sinking fate of fecal pellets is regulated by marine primary productivity, deep-dwelling zooplankton community, and deep-sea currents in the tropical marginal sea, thus providing a new perspective for exploring the carbon cycle in the world ocean.
Rebecca J. Chmiel, Riss M. Kell, Deepa Rao, Dawn M. Moran, Giacomo R. DiTullio, and Mak A. Saito
Biogeosciences, 20, 3997–4027, https://doi.org/10.5194/bg-20-3997-2023, https://doi.org/10.5194/bg-20-3997-2023, 2023
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Cobalt is an important micronutrient for plankton, yet it is often scarce throughout the oceans. A 2017/2018 expedition to coastal Antarctica, including regions of the Amundsen Sea and the Ross Sea, discovered lower concentrations of cobalt compared to two past expeditions in 2005 and 2006, particularly for the type of cobalt preferred as a nutrient by phytoplankton. This loss may be due to changing inputs of other nutrients, causing higher uptake of cobalt by plankton over the last decade.
Emily B. Graham, Hyun-Seob Song, Samantha Grieger, Vanessa A. Garayburu-Caruso, James C. Stegen, Kevin D. Bladon, and Allison N. Myers-Pigg
Biogeosciences, 20, 3449–3457, https://doi.org/10.5194/bg-20-3449-2023, https://doi.org/10.5194/bg-20-3449-2023, 2023
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Intensifying wildfires are increasing pyrogenic organic matter (PyOM) production and its impact on water quality. Recent work indicates that PyOM may have a greater impact on aquatic biogeochemistry than previously assumed, driven by higher bioavailability. We provide a full assessment of the potential bioavailability of PyOM across its chemical spectrum. We indicate that PyOM can be actively transformed within the river corridor and, therefore, may be a growing source of riverine C emissions.
Nora Richter, Ellen C. Hopmans, Danica Mitrović, Pedro M. Raposeiro, Vítor Gonçalves, Ana C. Costa, Linda A. Amaral-Zettler, Laura Villanueva, and Darci Rush
Biogeosciences, 20, 2065–2098, https://doi.org/10.5194/bg-20-2065-2023, https://doi.org/10.5194/bg-20-2065-2023, 2023
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Bacteriohopanepolyols (BHPs) are a diverse class of lipids produced by bacteria across a wide range of environments. This study characterizes the diversity of BHPs in lakes and coastal lagoons in the Azores Archipelago, as well as a co-culture enriched for methanotrophs. We highlight the potential of BHPs as taxonomic markers for bacteria associated with certain ecological niches, which can be preserved in sedimentary records.
Andrea Scheibe, Carlos A. Sierra, and Marie Spohn
Biogeosciences, 20, 827–838, https://doi.org/10.5194/bg-20-827-2023, https://doi.org/10.5194/bg-20-827-2023, 2023
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We explored carbon cycling in soils in three climate zones in Chile down to a depth of 6 m, using carbon isotopes. Our results show that microbial activity several meters below the soil surface is mostly fueled by recently fixed carbon and that strong decomposition of soil organic matter only occurs in the upper decimeters of the soils. The study shows that different layers of the critical zone are tightly connected and that processes in the deep soil depend on recently fixed carbon.
Melissa Sophia Schwab, Hannah Gies, Chantal Valérie Freymond, Maarten Lupker, Negar Haghipour, and Timothy Ian Eglinton
Biogeosciences, 19, 5591–5616, https://doi.org/10.5194/bg-19-5591-2022, https://doi.org/10.5194/bg-19-5591-2022, 2022
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The majority of river studies focus on headwater or floodplain systems, while often neglecting intermediate river segments. Our study on the subalpine Sihl River bridges the gap between streams and lowlands and demonstrates that moderately steep river segments are areas of significant instream alterations, modulating the export of organic carbon over short distances.
Lisa Noll, Shasha Zhang, Qing Zheng, Yuntao Hu, Florian Hofhansl, and Wolfgang Wanek
Biogeosciences, 19, 5419–5433, https://doi.org/10.5194/bg-19-5419-2022, https://doi.org/10.5194/bg-19-5419-2022, 2022
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Cleavage of proteins to smaller nitrogen compounds allows microorganisms and plants to exploit the largest nitrogen reservoir in soils and is considered the bottleneck in soil organic nitrogen cycling. Results from soils covering a European transect show that protein turnover is constrained by soil geochemistry, shifts in climate and associated alterations in soil weathering and should be considered as a driver of soil nitrogen availability with repercussions on carbon cycle processes.
Muhammed Fatih Sert, Helge Niemann, Eoghan P. Reeves, Mats A. Granskog, Kevin P. Hand, Timo Kekäläinen, Janne Jänis, Pamela E. Rossel, Bénédicte Ferré, Anna Silyakova, and Friederike Gründger
Biogeosciences, 19, 2101–2120, https://doi.org/10.5194/bg-19-2101-2022, https://doi.org/10.5194/bg-19-2101-2022, 2022
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We investigate organic matter composition in the Arctic Ocean water column. We collected seawater samples from sea ice to deep waters at six vertical profiles near an active hydrothermal vent and its plume. In comparison to seawater, we found that the organic matter in waters directly affected by the hydrothermal plume had different chemical composition. We suggest that hydrothermal processes may influence the organic matter distribution in the deep ocean.
Charlotte Haugk, Loeka L. Jongejans, Kai Mangelsdorf, Matthias Fuchs, Olga Ogneva, Juri Palmtag, Gesine Mollenhauer, Paul J. Mann, P. Paul Overduin, Guido Grosse, Tina Sanders, Robyn E. Tuerena, Lutz Schirrmeister, Sebastian Wetterich, Alexander Kizyakov, Cornelia Karger, and Jens Strauss
Biogeosciences, 19, 2079–2094, https://doi.org/10.5194/bg-19-2079-2022, https://doi.org/10.5194/bg-19-2079-2022, 2022
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Buried animal and plant remains (carbon) from the last ice age were freeze-locked in permafrost. At an extremely fast eroding permafrost cliff in the Lena Delta (Siberia), we found this formerly frozen carbon well preserved. Our results show that ongoing degradation releases substantial amounts of this carbon, making it available for future carbon emissions. This mobilisation at the studied cliff and also similarly eroding sites bear the potential to affect rivers and oceans negatively.
Aleksandar I. Goranov, Andrew S. Wozniak, Kyle W. Bostick, Andrew R. Zimmerman, Siddhartha Mitra, and Patrick G. Hatcher
Biogeosciences, 19, 1491–1514, https://doi.org/10.5194/bg-19-1491-2022, https://doi.org/10.5194/bg-19-1491-2022, 2022
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Wildfire-derived molecules are ubiquitous in the aquatic environment, but their biological fate remains understudied. We have evaluated the compositional changes that occur to wildfire-derived molecules after incubation with soil microbes. We observe a significant degradation but also a production of numerous new labile molecules. Our results indicate that wildfire-derived molecules can be broken down and the carbon and nitrogen therein can be incorporated into microbial food webs.
Edgart Flores, Sebastian I. Cantarero, Paula Ruiz-Fernández, Nadia Dildar, Matthias Zabel, Osvaldo Ulloa, and Julio Sepúlveda
Biogeosciences, 19, 1395–1420, https://doi.org/10.5194/bg-19-1395-2022, https://doi.org/10.5194/bg-19-1395-2022, 2022
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In this study, we investigate the chemical diversity and abundance of microbial lipids as markers of organic matter sources in the deepest points of the Atacama Trench sediments and compare them to similar lipid stocks in shallower surface sediments and in the overlying water column. We evaluate possible organic matter provenance and some potential chemical adaptations of the in situ microbial community to the extreme conditions of high hydrostatic pressure in hadal realm.
Birgit Gaye, Niko Lahajnar, Natalie Harms, Sophie Anna Luise Paul, Tim Rixen, and Kay-Christian Emeis
Biogeosciences, 19, 807–830, https://doi.org/10.5194/bg-19-807-2022, https://doi.org/10.5194/bg-19-807-2022, 2022
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Amino acids were analyzed in a large number of samples of particulate and dissolved organic matter from coastal regions and the open ocean. A statistical analysis produced two new biogeochemical indicators. An indicator of sinking particle and sediment degradation (SDI) traces the degradation of organic matter from the surface waters into the sediments. A second indicator shows the residence time of suspended matter in the ocean (RTI).
Zoë R. van Kemenade, Laura Villanueva, Ellen C. Hopmans, Peter Kraal, Harry J. Witte, Jaap S. Sinninghe Damsté, and Darci Rush
Biogeosciences, 19, 201–221, https://doi.org/10.5194/bg-19-201-2022, https://doi.org/10.5194/bg-19-201-2022, 2022
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Anaerobic ammonium oxidation (anammox) is an important nitrogen-removal process in the ocean. We assess the distribution of bacteriohopanetetrol-x (BHT-x), used to trace past anammox, along a redox gradient in the water column of the Benguela upwelling system. BHT-x / BHT ratios of >0.18 correspond to the presence of living anammox bacteria and oxygen levels <50 μmol L−1. This allows for a more robust application of BHT-x to trace past marine anammox and deoxygenation in dynamic marine systems.
Jia-Jang Hung, Ching-Han Tung, Zong-Ying Lin, Yuh-ling Lee Chen, Shao-Hung Peng, Yen-Huei Lin, and Li-Shan Tsai
Biogeosciences, 18, 5141–5162, https://doi.org/10.5194/bg-18-5141-2021, https://doi.org/10.5194/bg-18-5141-2021, 2021
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We report measured active and passive fluxes and their controlling mechanisms in the northern South China Sea (NSCS). The total fluxes were higher than most reports in open oceans, indicating the significance of NSCS in atmospheric CO2 uptake and in storing that CO2 in the ocean’s interior. Winter cooling and extreme events enhanced nutrient availability and elevated fluxes. Global warming may have profound impacts on reducing ocean’s uptake and storage of CO2 in subtropical–tropical oceans.
Jens Daniel Müller, Bernd Schneider, Ulf Gräwe, Peer Fietzek, Marcus Bo Wallin, Anna Rutgersson, Norbert Wasmund, Siegfried Krüger, and Gregor Rehder
Biogeosciences, 18, 4889–4917, https://doi.org/10.5194/bg-18-4889-2021, https://doi.org/10.5194/bg-18-4889-2021, 2021
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Based on profiling pCO2 measurements from a field campaign, we quantify the biomass production of a cyanobacteria bloom in the Baltic Sea, the export of which would foster deep water deoxygenation. We further demonstrate how this biomass production can be accurately reconstructed from long-term surface measurements made on cargo vessels in combination with modelled temperature profiles. This approach enables a better understanding of a severe concern for the Baltic’s good environmental status.
Alexander Braun, Marina Spona-Friedl, Maria Avramov, Martin Elsner, Federico Baltar, Thomas Reinthaler, Gerhard J. Herndl, and Christian Griebler
Biogeosciences, 18, 3689–3700, https://doi.org/10.5194/bg-18-3689-2021, https://doi.org/10.5194/bg-18-3689-2021, 2021
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It is known that CO2 fixation by photoautotrophic organisms is the major sink from the atmosphere. While biologists are aware that CO2 fixation also occurs in heterotrophic organisms, this route of inorganic carbon, and its quantitative role, is hardly recognized in biogeochemistry. We demonstrate that a considerable amount of CO2 is fixed annually through anaplerotic reactions in heterotrophic organisms, and a significant quantity of inorganic carbon is temporally sequestered in biomass.
Jonathan H. Raberg, David J. Harning, Sarah E. Crump, Greg de Wet, Aria Blumm, Sebastian Kopf, Áslaug Geirsdóttir, Gifford H. Miller, and Julio Sepúlveda
Biogeosciences, 18, 3579–3603, https://doi.org/10.5194/bg-18-3579-2021, https://doi.org/10.5194/bg-18-3579-2021, 2021
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BrGDGT lipids are a proxy for temperature in lake sediments, but other parameters like pH can influence them, and seasonality can affect the temperatures they record. We find a warm-season bias at 43 new high-latitude sites. We also present a new method that deconvolves the effects of temperature, pH, and conductivity and generate global calibrations for these variables. Our study provides new paleoclimate tools, insight into brGDGTs at the biochemical level, and a new method for future study.
Charlotte L. Spencer-Jones, Erin L. McClymont, Nicole J. Bale, Ellen C. Hopmans, Stefan Schouten, Juliane Müller, E. Povl Abrahamsen, Claire Allen, Torsten Bickert, Claus-Dieter Hillenbrand, Elaine Mawbey, Victoria Peck, Aleksandra Svalova, and James A. Smith
Biogeosciences, 18, 3485–3504, https://doi.org/10.5194/bg-18-3485-2021, https://doi.org/10.5194/bg-18-3485-2021, 2021
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Long-term ocean temperature records are needed to fully understand the impact of West Antarctic Ice Sheet collapse. Glycerol dialkyl glycerol tetraethers (GDGTs) are powerful tools for reconstructing ocean temperature but can be difficult to apply to the Southern Ocean. Our results show active GDGT synthesis in relatively warm depths of the ocean. This research improves the application of GDGT palaeoceanographic proxies in the Southern Ocean.
Alec W. Armstrong, Leanne Powers, and Michael Gonsior
Biogeosciences, 18, 3367–3390, https://doi.org/10.5194/bg-18-3367-2021, https://doi.org/10.5194/bg-18-3367-2021, 2021
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Living things decay into organic matter, which can dissolve into water (like tea brewing). Tea receives its color by absorbing light. Similarly, this material absorbs light, which can then cause chemical reactions that change it. By measuring changes in these optical properties, we found that materials from some places are more sensitive to light than others. Comparing sensitivity to light helps us understand where these materials come from and what happens as they move through water.
Ben J. Fisher, Johan C. Faust, Oliver W. Moore, Caroline L. Peacock, and Christian März
Biogeosciences, 18, 3409–3419, https://doi.org/10.5194/bg-18-3409-2021, https://doi.org/10.5194/bg-18-3409-2021, 2021
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Organic carbon can be protected from microbial degradation in marine sediments through association with iron minerals on 1000-year timescales. Despite the importance of this carbon sink, our spatial and temporal understanding of iron-bound organic carbon interactions globally is poor. Here we show that caution must be applied when comparing quantification of iron-bound organic carbon extracted by different methods as the extraction strength and method specificity can be highly variable.
Nadine T. Smit, Laura Villanueva, Darci Rush, Fausto Grassa, Caitlyn R. Witkowski, Mira Holzheimer, Adriaan J. Minnaard, Jaap S. Sinninghe Damsté, and Stefan Schouten
Biogeosciences, 18, 1463–1479, https://doi.org/10.5194/bg-18-1463-2021, https://doi.org/10.5194/bg-18-1463-2021, 2021
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Soils from an everlasting fire (gas seep) in Sicily, Italy, reveal high relative abundances of novel uncultivated mycobacteria and unique 13C-depleted mycocerosic acids (multi-methyl branched fatty acids) close to the main gas seep. Our results imply that mycocerosic acids in combination with their depleted δ13C values offer a new biomarker tool to study the role of soil mycobacteria as hydrocarbon consumers in the modern and past global carbon cycle.
Marcus P. S. Badger
Biogeosciences, 18, 1149–1160, https://doi.org/10.5194/bg-18-1149-2021, https://doi.org/10.5194/bg-18-1149-2021, 2021
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Reconstructing ancient atmospheric CO2 is an important aim of palaeoclimate science in order to understand the Earth's climate system. One method, the alkenone proxy based on molecular fossils of coccolithophores, has been recently shown to be ineffective at low-to-moderate CO2 levels. In this paper I show that this is likely due to changes in the biogeochemistry of the coccolithophores when there is low carbon availability, but for much of the Cenozoic the alkenone proxy should have utility.
Loes G. J. van Bree, Francien Peterse, Allix J. Baxter, Wannes De Crop, Sigrid van Grinsven, Laura Villanueva, Dirk Verschuren, and Jaap S. Sinninghe Damsté
Biogeosciences, 17, 5443–5463, https://doi.org/10.5194/bg-17-5443-2020, https://doi.org/10.5194/bg-17-5443-2020, 2020
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Branched glycerol dialkyl glycerol tetraethers (brGDGTs) are used as a paleothermometer based on their temperature dependence in global soils, but aquatic production complicates their use in lakes. BrGDGTs in the water column of Lake Chala, East Africa, respond to oxygen conditions and mixing. Changes in their signal can be linked to bacterial community composition rather than membrane adaptation to changing conditions. Their integrated signal in the sediment reflects mean air temperature.
Alexandra N. Loginova, Andrew W. Dale, Frédéric A. C. Le Moigne, Sören Thomsen, Stefan Sommer, David Clemens, Klaus Wallmann, and Anja Engel
Biogeosciences, 17, 4663–4679, https://doi.org/10.5194/bg-17-4663-2020, https://doi.org/10.5194/bg-17-4663-2020, 2020
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We measured dissolved organic carbon (DOC), nitrogen (DON) and matter (DOM) optical properties in pore waters and near-bottom waters of the eastern tropical South Pacific off Peru. The difference between diffusion-driven and net fluxes of DOC and DON and qualitative changes in DOM optical properties suggested active microbial utilisation of the released DOM at the sediment–water interface. Our results suggest that the sediment release of DOM contributes to microbial processes in the area.
Gerard J. M. Versteegh, Alexander J. P. Houben, and Karin A. F. Zonneveld
Biogeosciences, 17, 3545–3561, https://doi.org/10.5194/bg-17-3545-2020, https://doi.org/10.5194/bg-17-3545-2020, 2020
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Anoxic sediments mostly contain much more organic matter than oxic ones, and therefore organic matter in anoxic settings is often considered to be preserved better than in oxic settings. However, through the analysis of the same fossil dinoflagellate cyst species from both oxic and anoxic settings, we show that at a molecular level the preservation in the oxic sediments may be better since in the anoxic setting the cyst macromolecule has been altered by postdepositional modification.
Jingjing Guo, Miriam Glendell, Jeroen Meersmans, Frédérique Kirkels, Jack J. Middelburg, and Francien Peterse
Biogeosciences, 17, 3183–3201, https://doi.org/10.5194/bg-17-3183-2020, https://doi.org/10.5194/bg-17-3183-2020, 2020
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The fluxes of soil organic carbon (OC) transport from land to sea are poorly constrained, mostly due to the lack of a specific tracer for soil OC. Here we evaluate the use of specific molecules derived from soil bacteria as a tracer for soil OC in a small river catchment. We find that the initial soil signal is lost upon entering the aquatic environment. However, the local environmental history of the catchment is reflected by these molecules in the lake sediments that act as their sink.
Zhuo-Yi Zhu, Joanne Oakes, Bradley Eyre, Youyou Hao, Edwin Sien Aun Sia, Shan Jiang, Moritz Müller, and Jing Zhang
Biogeosciences, 17, 2473–2485, https://doi.org/10.5194/bg-17-2473-2020, https://doi.org/10.5194/bg-17-2473-2020, 2020
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Samples were collected in August 2016 in the Rajang River and its estuary, with tropical forest in the river basin and peatland in the estuary. Organic matter composition was influenced by transportation in the river basin, whereas peatland added clear biodegraded parts to the fluvial organic matter, which implies modification of the initial lability and/or starting points in the subsequent degradation and alternation processes after the organic matter enters the sea.
Wenjie Xiao, Yasong Wang, Yongsheng Liu, Xi Zhang, Linlin Shi, and Yunping Xu
Biogeosciences, 17, 2135–2148, https://doi.org/10.5194/bg-17-2135-2020, https://doi.org/10.5194/bg-17-2135-2020, 2020
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The hadal zone (6–11 km depth) is the least explored habitat on Earth. We studied microbial branched glycerol dialkyl glycerol tetraethers (brGDGTs) in the Challenger Deep, Mariana Trench. One unique feature is the strong predominance of 6-methyl brGDGT, which likely reflects an adaption of brGDGT-producing bacteria to alkaline seawater and low temperature. BrGDGTs, with elemental and isotopic data, suggest an autochthonous product for brGDGT. A new approach is proposed for brGDGT sourcing.
Yuge Bai, Edisson Subdiaga, Stefan B. Haderlein, Heike Knicker, and Andreas Kappler
Biogeosciences, 17, 683–698, https://doi.org/10.5194/bg-17-683-2020, https://doi.org/10.5194/bg-17-683-2020, 2020
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Biogeochemical processes of SOM are key for greenhouse gas emission and water quality. We extracted SOM by water or by NaOH–HCl under oxic–anoxic conditions. Chemical and anoxic extractions lead to higher SOM electron exchange capacities, resulting in stimulation of microbial Fe(III) reduction. Therefore, aqueous pH-neutral SOM extracts should be used to reflect environmental SOM redox processes, and artifacts of chemical extractions need to be considered when evaluating SOM redox processes.
Yan Shen, Volker Thiel, Pablo Suarez-Gonzalez, Sebastiaan W. Rampen, and Joachim Reitner
Biogeosciences, 17, 649–666, https://doi.org/10.5194/bg-17-649-2020, https://doi.org/10.5194/bg-17-649-2020, 2020
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Today, sterols are widespread in plants, animals, and fungi but are almost absent in the oldest rocks. Microbial mats, representing the earliest complex ecosystems on Earth, were omnipresent in Precambrian marine environments and may have degraded the sterols at that time. Here we analyze the distribution of sterols through a microbial mat. This provides insight into how variations in biological and nonbiological factors affect the preservation of sterols in modern and ancient microbial mats.
Sarah Coffinet, Travis B. Meador, Lukas Mühlena, Kevin W. Becker, Jan Schröder, Qing-Zeng Zhu, Julius S. Lipp, Verena B. Heuer, Matthew P. Crump, and Kai-Uwe Hinrichs
Biogeosciences, 17, 317–330, https://doi.org/10.5194/bg-17-317-2020, https://doi.org/10.5194/bg-17-317-2020, 2020
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This study deals with two membrane lipids called BDGTs and PDGTs. Membrane lipids are molecules forming the cell envelope of all organisms. Different organisms produce different lipids thus they can be used to detect the presence of specific organisms in the environment. We analyzed the structure of these new lipids and looked for potential producers. We found that they are likely made by microbes emitting methane below the sediment surface and could be used to track these specific microbes.
Ying Wu, Kun Zhu, Jing Zhang, Moritz Müller, Shan Jiang, Aazani Mujahid, Mohd Fakharuddin Muhamad, and Edwin Sien Aun Sia
Biogeosciences, 16, 4517–4533, https://doi.org/10.5194/bg-16-4517-2019, https://doi.org/10.5194/bg-16-4517-2019, 2019
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Our understanding of terrestrial organic matter (TOM) in tropical peat-draining rivers remains limited, especially in Southeast Asia. We explored the characteristics of TOM via bulk parameters and lignin phenols of sediment in Malaysia. This showed that the most important plant source of the organic matter in these rivers is woody angiosperm C3 plants with limited diagenetic alteration. This slower degradation of TOM may be a link to higher total nitrogen content, especially for the small river.
Caitlyn R. Witkowski, Sylvain Agostini, Ben P. Harvey, Marcel T. J. van der Meer, Jaap S. Sinninghe Damsté, and Stefan Schouten
Biogeosciences, 16, 4451–4461, https://doi.org/10.5194/bg-16-4451-2019, https://doi.org/10.5194/bg-16-4451-2019, 2019
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Carbon dioxide concentrations (pCO2) in the atmosphere play an integral role in Earth system dynamics, especially climate. Past climates help us understand future ones, but reconstructing pCO2 over the geologic record remains a challenge. This research demonstrates new approaches for exploring past pCO2 via the carbon isotope fractionation in general algal lipids, which we test over a high CO2 gradient from a naturally occurring CO2 seep.
Yongli Zhou, Patrick Martin, and Moritz Müller
Biogeosciences, 16, 2733–2749, https://doi.org/10.5194/bg-16-2733-2019, https://doi.org/10.5194/bg-16-2733-2019, 2019
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We found that peatlands in coastal Sarawak, Borneo, export extremely humified organic matter, which dominates the riverine organic matter pool and conservatively mixes with seawater, while the freshly produced fraction is low and stable in concentration at all salinities. We estimated that terrigenous fractions, which showed high photolability, still account for 20 % of the coastal dissolved organic carbon pool, implying the importance of peat-derived organic matter in the coastal carbon cycle.
Kristin Doering, Claudia Ehlert, Philippe Martinez, Martin Frank, and Ralph Schneider
Biogeosciences, 16, 2163–2180, https://doi.org/10.5194/bg-16-2163-2019, https://doi.org/10.5194/bg-16-2163-2019, 2019
Alexandra N. Loginova, Sören Thomsen, Marcus Dengler, Jan Lüdke, and Anja Engel
Biogeosciences, 16, 2033–2047, https://doi.org/10.5194/bg-16-2033-2019, https://doi.org/10.5194/bg-16-2033-2019, 2019
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High primary production in the Peruvian upwelling system is followed by rapid heterotrophic utilization of organic matter and supports the formation of one of the most intense oxygen minimum zones (OMZs) in the world. Here, we estimated vertical fluxes of oxygen and dissolved organic matter (DOM) from the surface to the OMZ. Our results suggest that DOM remineralization substantially reduces oxygen concentration in the upper water column and controls the shape of the upper oxycline.
Carolina Cisternas-Novoa, Frédéric A. C. Le Moigne, and Anja Engel
Biogeosciences, 16, 927–947, https://doi.org/10.5194/bg-16-927-2019, https://doi.org/10.5194/bg-16-927-2019, 2019
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We investigate the composition and vertical fluxes of POM in two deep basins of the Baltic Sea (GB: Gotland Basin and LD: Landsort Deep). The two basins showed different O2 regimes resulting from the intrusion of oxygen-rich water from the North Sea that ventilated the deep waters in GB, but not in LD.
In GB, O2 intrusions lead to a high abundance of manganese oxides that aggregate with POM, altering its composition and vertical flux and contributing to a higher POC transfer efficiency in GB.
Marina Zamanillo, Eva Ortega-Retuerta, Sdena Nunes, Pablo Rodríguez-Ros, Manuel Dall'Osto, Marta Estrada, Maria Montserrat Sala, and Rafel Simó
Biogeosciences, 16, 733–749, https://doi.org/10.5194/bg-16-733-2019, https://doi.org/10.5194/bg-16-733-2019, 2019
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Many marine microorganisms produce polysaccharide-rich transparent exopolymer particles (TEPs) for rather unknown reasons but with important consequences for the ocean carbon cycle, sea–air gas exchange and formation of organic aerosols. Here we compare surface–ocean distributions of TEPs and physical, chemical and biological variables along a N–S transect in the Atlantic Ocean. Our data suggest that phytoplankton and not bacteria are the main TEP producers, and solar radiation acts as a sink.
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Short summary
We link detailed stable isotope and biomarker analyses from the catchments of three Arctic upland lakes on Disko Island (West Greenland) to a recent dated sediment core to understand how carbon cycling has changed over the past ~500 years. We find that the carbon deposited in sediments in these upland lakes is predominately sourced from in-lake production due to the catchment's limited terrestrial vegetation and elevation and that recent increases in algal production link with climate change.
We link detailed stable isotope and biomarker analyses from the catchments of three Arctic...
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