Articles | Volume 19, issue 2
Biogeosciences, 19, 455–475, 2022
https://doi.org/10.5194/bg-19-455-2022
© Author(s) 2022. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Biogeosciences, 19, 455–475, 2022
https://doi.org/10.5194/bg-19-455-2022
© Author(s) 2022. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Research article
28 Jan 2022
Research article
| 28 Jan 2022
Mixed layer depth dominates over upwelling in regulating the seasonality of ecosystem functioning in the Peruvian upwelling system
Tianfei Xue et al.
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Chia-Te Chien, Jonathan V. Durgadoo, Dana Ehlert, Ivy Frenger, David P. Keller, Wolfgang Koeve, Iris Kriest, Angela Landolfi, Lavinia Patara, Sebastian Wahl, and Andreas Oschlies
Geosci. Model Dev., 15, 5987–6024, https://doi.org/10.5194/gmd-15-5987-2022, https://doi.org/10.5194/gmd-15-5987-2022, 2022
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We present the implementation and evaluation of a marine biogeochemical model, Model of Oceanic Pelagic Stoichiometry (MOPS) in the Flexible Ocean and Climate Infrastructure (FOCI) climate model. FOCI-MOPS enables the simulation of marine biological processes, the marine carbon, nitrogen and oxygen cycles, and air–sea gas exchange of CO2 and O2. As shown by our evaluation, FOCI-MOPS shows an overall adequate performance that makes it an appropriate tool for Earth climate system simulations.
Jiajun Wu, David P. Keller, and Andreas Oschlies
Earth Syst. Dynam. Discuss., https://doi.org/10.5194/esd-2021-104, https://doi.org/10.5194/esd-2021-104, 2022
Revised manuscript under review for ESD
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In this study we investigate an ocean-based carbon dioxide removal method: macroalgae open-ocean mariculture and sinking (MOS), which aims to cultivate seaweeds in the open ocean surface and sink matured biomass quickly to the deep seafloor. Our results suggest that MOS has a considerable potential as an ocean-based CDR method. However, MOS has inherent side effects on marine ecosystems and biogeochemistry, which will require a careful evaluation beyond this first idealized modeling study.
Karin Kvale, David P. Keller, Wolfgang Koeve, Katrin J. Meissner, Christopher J. Somes, Wanxuan Yao, and Andreas Oschlies
Geosci. Model Dev., 14, 7255–7285, https://doi.org/10.5194/gmd-14-7255-2021, https://doi.org/10.5194/gmd-14-7255-2021, 2021
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We present a new model of biological marine silicate cycling for the University of Victoria Earth System Climate Model (UVic ESCM). This new model adds diatoms, which are a key aspect of the biological carbon pump, to an existing ecosystem model. Our modifications change how the model responds to warming, with net primary production declining more strongly than in previous versions. Diatoms in particular are simulated to decline with climate warming due to their high nutrient requirements.
Olaf Duteil, Ivy Frenger, and Julia Getzlaff
Ocean Sci., 17, 1489–1507, https://doi.org/10.5194/os-17-1489-2021, https://doi.org/10.5194/os-17-1489-2021, 2021
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The large oxygen minimum zones in the tropical Pacific Ocean are still not well represented by typical climate models. We analyze a set of ocean models and highlight the fact that an oxygen concentration that is too low at intermediate depth in the subtropical regions associated with a sluggish representation of the intermediate equatorial current system may be responsible for the overly large extension of the modeled oxygen minimum zones, potentially hampering future projections.
Maria-Theresia Verwega, Christopher J. Somes, Markus Schartau, Robyn Elizabeth Tuerena, Anne Lorrain, Andreas Oschlies, and Thomas Slawig
Earth Syst. Sci. Data, 13, 4861–4880, https://doi.org/10.5194/essd-13-4861-2021, https://doi.org/10.5194/essd-13-4861-2021, 2021
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This work describes a ready-to-use collection of particulate organic carbon stable isotope ratio data sets. It covers the 1960s–2010s and all main oceans, providing meta-information and gridded data. The best coverage exists in Atlantic, Indian and Southern Ocean surface waters during the 1990s. It indicates no major difference between methods and shows decreasing values towards high latitudes, with the lowest in the Southern Ocean, and a long-term decline in all regions but the Southern Ocean.
Miriam Tivig, David P. Keller, and Andreas Oschlies
Biogeosciences, 18, 5327–5350, https://doi.org/10.5194/bg-18-5327-2021, https://doi.org/10.5194/bg-18-5327-2021, 2021
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Nitrogen is one of the most important elements for life in the ocean. A major source is the riverine discharge of dissolved nitrogen. While global models often omit rivers as a nutrient source, we included nitrogen from rivers in our Earth system model and found that additional nitrogen affected marine biology not only locally but also in regions far off the coast. Depending on regional conditions, primary production was enhanced or even decreased due to internal feedbacks in the nitrogen cycle.
Henrike Schmidt, Julia Getzlaff, Ulrike Löptien, and Andreas Oschlies
Ocean Sci., 17, 1303–1320, https://doi.org/10.5194/os-17-1303-2021, https://doi.org/10.5194/os-17-1303-2021, 2021
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Oxygen-poor regions in the open ocean restrict marine habitats. Global climate simulations show large uncertainties regarding the prediction of these areas. We analyse the representation of the simulated oxygen minimum zones in the Arabian Sea using 10 climate models. We give an overview of the main deficiencies that cause the model–data misfit in oxygen concentrations. This detailed process analysis shall foster future model improvements regarding the oxygen minimum zone in the Arabian Sea.
Jaard Hauschildt, Soeren Thomsen, Vincent Echevin, Andreas Oschlies, Yonss Saranga José, Gerd Krahmann, Laura A. Bristow, and Gaute Lavik
Biogeosciences, 18, 3605–3629, https://doi.org/10.5194/bg-18-3605-2021, https://doi.org/10.5194/bg-18-3605-2021, 2021
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In this paper we quantify the subduction of upwelled nitrate due to physical processes on the order of several kilometers in the coastal upwelling off Peru and its effect on primary production. We also compare the prepresentation of these processes in a high-resolution simulation (~2.5 km) with a more coarsely resolved simulation (~12 km). To do this, we combine high-resolution shipboard observations of physical and biogeochemical parameters with a complex biogeochemical model configuration.
Mariana Hill Cruz, Iris Kriest, Yonss Saranga José, Rainer Kiko, Helena Hauss, and Andreas Oschlies
Biogeosciences, 18, 2891–2916, https://doi.org/10.5194/bg-18-2891-2021, https://doi.org/10.5194/bg-18-2891-2021, 2021
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In this study we use a regional biogeochemical model of the eastern tropical South Pacific Ocean to implicitly simulate the effect that fluctuations in populations of small pelagic fish, such as anchovy and sardine, may have on the biogeochemistry of the northern Humboldt Current System. To do so, we vary the zooplankton mortality in the model, under the assumption that these fishes eat zooplankton. We also evaluate the model for the first time against mesozooplankton observations.
Chia-Te Chien, Markus Pahlow, Markus Schartau, and Andreas Oschlies
Geosci. Model Dev., 13, 4691–4712, https://doi.org/10.5194/gmd-13-4691-2020, https://doi.org/10.5194/gmd-13-4691-2020, 2020
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We demonstrate sensitivities of tracers to parameters of a new optimality-based plankton–ecosystem model (OPEM) in the UVic-ESCM. We find that changes in phytoplankton subsistence nitrogen quota strongly impact the nitrogen inventory, nitrogen fixation, and elemental stoichiometry of ordinary phytoplankton and diazotrophs. We introduce a new likelihood-based metric for model calibration, and it shows the capability of constraining globally averaged oxygen, nitrate, and DIC concentrations.
Markus Pahlow, Chia-Te Chien, Lionel A. Arteaga, and Andreas Oschlies
Geosci. Model Dev., 13, 4663–4690, https://doi.org/10.5194/gmd-13-4663-2020, https://doi.org/10.5194/gmd-13-4663-2020, 2020
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The stoichiometry of marine biotic processes is important for the regulation of atmospheric CO2 and hence the global climate. We replace a simplistic, fixed-stoichiometry plankton module in an Earth system model with an optimal-regulation model with variable stoichiometry. Our model compares better to the observed carbon transfer from the surface to depth and surface nutrient distributions. This work could aid our ability to describe and project the role of marine ecosystems in the Earth system.
Nadine Mengis, David P. Keller, Andrew H. MacDougall, Michael Eby, Nesha Wright, Katrin J. Meissner, Andreas Oschlies, Andreas Schmittner, Alexander J. MacIsaac, H. Damon Matthews, and Kirsten Zickfeld
Geosci. Model Dev., 13, 4183–4204, https://doi.org/10.5194/gmd-13-4183-2020, https://doi.org/10.5194/gmd-13-4183-2020, 2020
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In this paper, we evaluate the newest version of the University of Victoria Earth System Climate Model (UVic ESCM 2.10). Combining recent model developments as a joint effort, this version is to be used in the next phase of model intercomparison and climate change studies. The UVic ESCM 2.10 is capable of reproducing changes in historical temperature and carbon fluxes well. Additionally, the model is able to reproduce the three-dimensional distribution of many ocean tracers.
Sabine Mathesius, Julia Getzlaff, Heiner Dietze, Andreas Oschlies, and Markus Schartau
Earth Syst. Sci. Data, 12, 1775–1787, https://doi.org/10.5194/essd-12-1775-2020, https://doi.org/10.5194/essd-12-1775-2020, 2020
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Controlled manipulation of environmental conditions within large enclosures in the ocean, pelagic mesocosms, has become a standard method to explore responses of marine plankton communities to anthropogenic change. Among the challenges of interpreting mesocosm data is the often uncertain role of vertical mixing. This study introduces a mesocosm mixing model that is able to estimate vertical diffusivities and thus provides a tool for future mesocosm data analyses that account for mixing.
Iris Kriest, Paul Kähler, Wolfgang Koeve, Karin Kvale, Volkmar Sauerland, and Andreas Oschlies
Biogeosciences, 17, 3057–3082, https://doi.org/10.5194/bg-17-3057-2020, https://doi.org/10.5194/bg-17-3057-2020, 2020
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Constants of global biogeochemical ocean models are often tuned
by handto match observations of nutrients or oxygen. We investigate the effect of this tuning by optimising six constants of a global biogeochemical model, simulated in five different offline circulations. Optimal values for three constants adjust to distinct features of the circulation applied and can afterwards be swapped among the circulations, without losing too much of the model's fit to observed quantities.
Fabian Reith, Wolfgang Koeve, David P. Keller, Julia Getzlaff, and Andreas Oschlies
Earth Syst. Dynam., 10, 711–727, https://doi.org/10.5194/esd-10-711-2019, https://doi.org/10.5194/esd-10-711-2019, 2019
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This modeling study is the first one to look at the suitability and collateral effects of direct CO2 injection into the deep ocean as a means to bridge the gap between CO2 emissions and climate impacts of an intermediate CO2 emission scenario and a temperature target on a millennium timescale, such as the 1.5 °C climate target of the Paris Agreement.
Tronje P. Kemena, Angela Landolfi, Andreas Oschlies, Klaus Wallmann, and Andrew W. Dale
Earth Syst. Dynam., 10, 539–553, https://doi.org/10.5194/esd-10-539-2019, https://doi.org/10.5194/esd-10-539-2019, 2019
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Oceanic deoxygenation is driven by climate change in several areas of the global ocean. Measurements indicate that ocean volumes with very low oxygen levels expand, with consequences for marine organisms and fishery. We found climate-change-driven phosphorus (P) input in the ocean is hereby an important driver for deoxygenation on longer timescales with effects in the next millennia.
Daniela Niemeyer, Iris Kriest, and Andreas Oschlies
Biogeosciences, 16, 3095–3111, https://doi.org/10.5194/bg-16-3095-2019, https://doi.org/10.5194/bg-16-3095-2019, 2019
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Recent studies suggest spatial variations of the marine particle flux length scale. Using a global biogeochemical ocean model, we investigate whether changes in particle size and size-dependent sinking can explain this variation. We address uncertainties by varying aggregate properties and circulation. Both aspects have an impact on the representation of nutrients, oxygen and oxygen minimum zones. The formation and sinking of large aggregates in productive areas lead to deeper flux penetration.
Yonss Saranga José, Lothar Stramma, Sunke Schmidtko, and Andreas Oschlies
Biogeosciences Discuss., https://doi.org/10.5194/bg-2019-155, https://doi.org/10.5194/bg-2019-155, 2019
Revised manuscript accepted for BG
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In situ observations along the Peruvian and Chilean coasts have exhibited variability in the water column oxygen concentration. This variability, which is attributed to the El Niño Southern Oscillation (ENSO), might have implication on the vertical extension of the Eastern Tropical South Pacific (ETSP) oxygen minimum zone. Here using a coupled physical-biogeochemical model, we provide new insights into how ENSO variability affects the vertical extension of the oxygen-poor waters of the ETSP.
Olaf Duteil, Andreas Oschlies, and Claus W. Böning
Biogeosciences, 15, 7111–7126, https://doi.org/10.5194/bg-15-7111-2018, https://doi.org/10.5194/bg-15-7111-2018, 2018
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Oxygen-depleted regions of the Pacific Ocean are currently expanding, which is threatening marine habitats. Based on numerical simulations, we show that the decrease in the intensity of the trade winds and the subsequent slowdown of the oceanic currents lead to a reduction in oxygen supply. Our study suggests that the prevailing positive conditions of the Pacific Decadal Oscillation since 1975, a major source of natural variability, may explain a significant part of the current deoxygenation.
Marine Bretagnon, Aurélien Paulmier, Véronique Garçon, Boris Dewitte, Séréna Illig, Nathalie Leblond, Laurent Coppola, Fernando Campos, Federico Velazco, Christos Panagiotopoulos, Andreas Oschlies, J. Martin Hernandez-Ayon, Helmut Maske, Oscar Vergara, Ivonne Montes, Philippe Martinez, Edgardo Carrasco, Jacques Grelet, Olivier Desprez-De-Gesincourt, Christophe Maes, and Lionel Scouarnec
Biogeosciences, 15, 5093–5111, https://doi.org/10.5194/bg-15-5093-2018, https://doi.org/10.5194/bg-15-5093-2018, 2018
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In oxygen minimum zone, the fate of the organic matter is a key question as the low oxygen condition would preserve the OM and thus enhance the biological carbon pump while the high microbial activity would foster the remineralisation and the greenhouse gases emission. To investigate this paradigm, sediment traps were deployed off Peru. We pointed out the influence of the oxygenation as well as the organic matter quantity and quality on the carbon transfer efficiency in the oxygen minimum zone.
Ivy Frenger, Matthias Münnich, and Nicolas Gruber
Biogeosciences, 15, 4781–4798, https://doi.org/10.5194/bg-15-4781-2018, https://doi.org/10.5194/bg-15-4781-2018, 2018
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Although mesoscale ocean eddies are ubiquitous in the Southern Ocean (SO), their regional and seasonal association with phytoplankton has not been quantified. We identify over 100 000 eddies and determine the associated phytoplankton biomass anomalies using satellite-based chlorophyll (Chl) as a proxy. The emerging Chl anomalies can be explained largely by lateral advection of Chl by eddies. This impact of eddies on phytoplankton may implicate downstream effects on SO biogeochemical properties.
Volkmar Sauerland, Ulrike Löptien, Claudine Leonhard, Andreas Oschlies, and Anand Srivastav
Geosci. Model Dev., 11, 1181–1198, https://doi.org/10.5194/gmd-11-1181-2018, https://doi.org/10.5194/gmd-11-1181-2018, 2018
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We present a concept to prove that a parametric model is well calibrated, i.e., that changes of its free parameters cannot lead to a much better model–data misfit anymore. The intention is motivated by the fact that calibrating global biogeochemical ocean models is important for assessment and inter-model comparison but computationally expensive.
Nadine Mengis, David P. Keller, and Andreas Oschlies
Earth Syst. Dynam., 9, 15–31, https://doi.org/10.5194/esd-9-15-2018, https://doi.org/10.5194/esd-9-15-2018, 2018
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The Systematic Correlation Matrix Evaluation (SCoMaE) method applies statistical information to systematically select, transparent, nonredundant indicators for a comprehensive assessment of the Earth system state. We show that due to changing climate forcing, such as anthropogenic climate change, the ad hoc assessment indicators might need to be reevaluated. Within an iterative process, this method would allow us to select scientifically consistent and societally relevant assessment indicators.
Karin F. Kvale, Samar Khatiwala, Heiner Dietze, Iris Kriest, and Andreas Oschlies
Geosci. Model Dev., 10, 2425–2445, https://doi.org/10.5194/gmd-10-2425-2017, https://doi.org/10.5194/gmd-10-2425-2017, 2017
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Computer models of ocean biology and chemistry are becoming increasingly complex, and thus more expensive, to run. One solution is to approximate the behaviour of the ocean physics and store that information outside of the model. That
offlineinformation can then be used to calculate a steady-state solution from the model's biology and chemistry, without waiting for a traditional
onlineintegration to complete. We show this offline method reproduces online results and is 100 times faster.
James C. Orr, Raymond G. Najjar, Olivier Aumont, Laurent Bopp, John L. Bullister, Gokhan Danabasoglu, Scott C. Doney, John P. Dunne, Jean-Claude Dutay, Heather Graven, Stephen M. Griffies, Jasmin G. John, Fortunat Joos, Ingeborg Levin, Keith Lindsay, Richard J. Matear, Galen A. McKinley, Anne Mouchet, Andreas Oschlies, Anastasia Romanou, Reiner Schlitzer, Alessandro Tagliabue, Toste Tanhua, and Andrew Yool
Geosci. Model Dev., 10, 2169–2199, https://doi.org/10.5194/gmd-10-2169-2017, https://doi.org/10.5194/gmd-10-2169-2017, 2017
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The Ocean Model Intercomparison Project (OMIP) is a model comparison effort under Phase 6 of the Coupled Model Intercomparison Project (CMIP6). Its physical component is described elsewhere in this special issue. Here we describe its ocean biogeochemical component (OMIP-BGC), detailing simulation protocols and analysis diagnostics. Simulations focus on ocean carbon, other biogeochemical tracers, air-sea exchange of CO2 and related gases, and chemical tracers used to evaluate modeled circulation.
Daniela Niemeyer, Tronje P. Kemena, Katrin J. Meissner, and Andreas Oschlies
Earth Syst. Dynam., 8, 357–367, https://doi.org/10.5194/esd-8-357-2017, https://doi.org/10.5194/esd-8-357-2017, 2017
Markus Schartau, Philip Wallhead, John Hemmings, Ulrike Löptien, Iris Kriest, Shubham Krishna, Ben A. Ward, Thomas Slawig, and Andreas Oschlies
Biogeosciences, 14, 1647–1701, https://doi.org/10.5194/bg-14-1647-2017, https://doi.org/10.5194/bg-14-1647-2017, 2017
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Plankton models have become an integral part in marine ecosystem and biogeochemical research. These models differ in complexity and in their number of parameters. How values are assigned to parameters is essential. An overview of major methodologies of parameter estimation is provided. Aspects of parameter identification in the literature are diverse. Individual findings could be better synthesized if notation and expertise of the different scientific communities would be reasonably merged.
Yonss Saranga José, Heiner Dietze, and Andreas Oschlies
Biogeosciences, 14, 1349–1364, https://doi.org/10.5194/bg-14-1349-2017, https://doi.org/10.5194/bg-14-1349-2017, 2017
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This study aims to investigate the diverse subsurface nutrient patterns observed within anticyclonic eddies in the upwelling system off Peru. Two simulated anticyclonic eddies with opposing subsurface nitrate concentrations were analysed. The results show that diverse nutrient patterns within anticyclonic eddies are related to the presence of water mass from different origins at different depths, responding to variations in depth of the circulation strength at the edge of the eddy.
Iris Kriest, Volkmar Sauerland, Samar Khatiwala, Anand Srivastav, and Andreas Oschlies
Geosci. Model Dev., 10, 127–154, https://doi.org/10.5194/gmd-10-127-2017, https://doi.org/10.5194/gmd-10-127-2017, 2017
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Global biogeochemical ocean models are subject to a high level of parametric uncertainty. This may be of consequence for their skill with respect to accurately describing features of the present ocean and their sensitivity to possible environmental changes. We present the first results from a framework that combines an offline biogeochemical tracer transport model with an estimation of distribution algorithm, calibrating six biogeochemical model parameters against observed oxygen and nutrients.
Fabian Reith, David P. Keller, and Andreas Oschlies
Earth Syst. Dynam., 7, 797–812, https://doi.org/10.5194/esd-7-797-2016, https://doi.org/10.5194/esd-7-797-2016, 2016
Bei Su, Markus Pahlow, and Andreas Oschlies
Biogeosciences, 13, 4985–5001, https://doi.org/10.5194/bg-13-4985-2016, https://doi.org/10.5194/bg-13-4985-2016, 2016
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Previously identified positive feedbacks within the nitrogen cycle in the eastern tropical South Pacific (ETSP) have challenged our understanding of the observed dynamics and stability of the nitrogen inventory. We present a box model analysis of the biological and biogeochemical relations in the ETSP among nitrogen deposition, benthic denitrification and phosphate regeneration. Our results suggest dominant stabilizing feedbacks tending to keep a balanced nitrogen inventory in the ETSP.
I. Kriest and A. Oschlies
Geosci. Model Dev., 8, 2929–2957, https://doi.org/10.5194/gmd-8-2929-2015, https://doi.org/10.5194/gmd-8-2929-2015, 2015
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We use a global model of oceanic P, N, and O2 cycles to investigate consequences of uncertainties in description of organic matter sinking, remineralization, denitrification, and N2-Fixation. After all biogeochemical and physical processes have been spun-up into a dynamically consistent steady-state, particle sinking and oxidant affinities of aerobic and anaerobic remineralization determine the extent of oxygen minimum zones, global nitrogen fluxes, and the oceanic nitrogen inventory.
W. Koeve, H. Wagner, P. Kähler, and A. Oschlies
Geosci. Model Dev., 8, 2079–2094, https://doi.org/10.5194/gmd-8-2079-2015, https://doi.org/10.5194/gmd-8-2079-2015, 2015
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The natural abundance of 14C in CO2 dissolved in seawater is often used to evaluate circulation and age in the ocean and in ocean models. We study limitations of using natural 14C to determine the time elapsed since water had contact with the atmosphere. We find that, globally, bulk 14C age is dominated by two equally important components, (1) the time component of circulation and (2) the “preformed 14C-age”. Considering preformed 14C-age is critical for an assessment of circulation in models.
L. Nickelsen, D. P. Keller, and A. Oschlies
Geosci. Model Dev., 8, 1357–1381, https://doi.org/10.5194/gmd-8-1357-2015, https://doi.org/10.5194/gmd-8-1357-2015, 2015
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In this paper we find that including the marine cycle of the phytoplankton nutrient iron in a global climate model improves the agreement between observed and simulated nutrient concentrations in the ocean and that a better description of the source of iron from the sediment to the ocean is more important than that of iron-containing dust deposition. Finally, we find that the response of the iron cycle to climate warming affects the phytoplankton growth and nutrient cycles.
B. Su, M. Pahlow, H. Wagner, and A. Oschlies
Biogeosciences, 12, 1113–1130, https://doi.org/10.5194/bg-12-1113-2015, https://doi.org/10.5194/bg-12-1113-2015, 2015
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A box model of the eastern tropical South Pacific oxygen minimum zone suggests that anaerobic water-column remineralization rates have to be slower than aerobic remineralization in order to explain the relatively high values of observed nitrate concentrations. Lateral oxygen supply sufficient to oxidize about one-fifth of the export production is required to prevent an anoxic deep ocean. Under these circumstances, the region can be a net source of fixed nitrogen to the surrounding ocean.
W. Koeve, O. Duteil, A. Oschlies, P. Kähler, and J. Segschneider
Geosci. Model Dev., 7, 2393–2408, https://doi.org/10.5194/gmd-7-2393-2014, https://doi.org/10.5194/gmd-7-2393-2014, 2014
A. E. F. Prowe, M. Pahlow, S. Dutkiewicz, and A. Oschlies
Biogeosciences, 11, 3397–3407, https://doi.org/10.5194/bg-11-3397-2014, https://doi.org/10.5194/bg-11-3397-2014, 2014
I. Kriest and A. Oschlies
Biogeosciences, 10, 8401–8422, https://doi.org/10.5194/bg-10-8401-2013, https://doi.org/10.5194/bg-10-8401-2013, 2013
O. Duteil, W. Koeve, A. Oschlies, D. Bianchi, E. Galbraith, I. Kriest, and R. Matear
Biogeosciences, 10, 7723–7738, https://doi.org/10.5194/bg-10-7723-2013, https://doi.org/10.5194/bg-10-7723-2013, 2013
C. J. Somes, A. Oschlies, and A. Schmittner
Biogeosciences, 10, 5889–5910, https://doi.org/10.5194/bg-10-5889-2013, https://doi.org/10.5194/bg-10-5889-2013, 2013
V. Cocco, F. Joos, M. Steinacher, T. L. Frölicher, L. Bopp, J. Dunne, M. Gehlen, C. Heinze, J. Orr, A. Oschlies, B. Schneider, J. Segschneider, and J. Tjiputra
Biogeosciences, 10, 1849–1868, https://doi.org/10.5194/bg-10-1849-2013, https://doi.org/10.5194/bg-10-1849-2013, 2013
A. Landolfi, H. Dietze, W. Koeve, and A. Oschlies
Biogeosciences, 10, 1351–1363, https://doi.org/10.5194/bg-10-1351-2013, https://doi.org/10.5194/bg-10-1351-2013, 2013
M. El Jarbi, J. Rückelt, T. Slawig, and A. Oschlies
Biogeosciences, 10, 1169–1182, https://doi.org/10.5194/bg-10-1169-2013, https://doi.org/10.5194/bg-10-1169-2013, 2013
L. M. Zamora, A. Oschlies, H. W. Bange, K. B. Huebert, J. D. Craig, A. Kock, and C. R. Löscher
Biogeosciences, 9, 5007–5022, https://doi.org/10.5194/bg-9-5007-2012, https://doi.org/10.5194/bg-9-5007-2012, 2012
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Biophysical controls on seasonal changes in the structure, growth, and grazing of the size-fractionated phytoplankton community in the northern South China Sea
Seasonal dispersal of fjord meltwaters as an important source of iron and manganese to coastal Antarctic phytoplankton
Modeling cyanobacteria life cycle dynamics and historical nitrogen fixation in the Baltic Proper
Simultaneous assessment of oxygen- and nitrate-based net community production in a temperate shelf sea from a single ocean glider
Reviews and syntheses: Physical and biogeochemical processes associated with upwelling in the Indian Ocean
Particulate organic carbon dynamics in the Gulf of Lion shelf (NW Mediterranean) using a coupled hydrodynamic–biogeochemical model
Technical note: Novel triple O2 sensor aquatic eddy covariance instrument with improved time shift correction reveals central role of microphytobenthos for carbon cycling in coral reef sands
Long-term spatiotemporal variations in and expansion of low-oxygen conditions in the Pearl River estuary: a study synthesizing observations during 1976–2017
Fe-binding organic ligands in coastal and frontal regions of the western Antarctic Peninsula
Temporal variability and driving factors of the carbonate system in the Aransas Ship Channel, TX, USA: a time series study
Nitrogen loss processes in response to upwelling in a Peruvian coastal setting dominated by denitrification – a mesocosm approach
Retracing hypoxia in Eckernförde Bight (Baltic Sea)
The impact of the freeze–melt cycle of land-fast ice on the distribution of dissolved organic matter in the Laptev and East Siberian seas (Siberian Arctic)
The fate of upwelled nitrate off Peru shaped by submesoscale filaments and fronts
Coastal processes modify projections of some climate-driven stressors in the California Current System
Upwelling-induced trace gas dynamics in the Baltic Sea inferred from 8 years of autonomous measurements on a ship of opportunity
Destruction and reinstatement of coastal hypoxia in the South China Sea off the Pearl River estuary
Hypersaline tidal flats as important “blue carbon” systems: a case study from three ecosystems
Drivers and impact of the seasonal variability of the organic carbon offshore transport in the Canary upwelling system
Organic carbon densities and accumulation rates in surface sediments of the North Sea and Skagerrak
An observation-based evaluation and ranking of historical Earth system model simulations in the northwest North Atlantic Ocean
Characterizing the origins of dissolved organic carbon in coastal seawater using stable carbon isotope and light absorption characteristics
Warming and ocean acidification may decrease estuarine dissolved organic carbon export to the ocean
Chemical characterization of the Punta de Fuencaliente CO2-enriched system (La Palma, NE Atlantic Ocean): a new natural laboratory for ocean acidification studies
The seasonal phases of an Arctic lagoon reveal the discontinuities of pH variability and CO2 flux at the air–sea interface
The northern European shelf as an increasing net sink for CO2
Impacts of biogenic polyunsaturated aldehydes on metabolism and community composition of particle-attached bacteria in coastal hypoxia
A Lagrangian study of the contribution of the Canary coastal upwelling to the nitrogen budget of the open North Atlantic
Denitrification by benthic foraminifera and their contribution to N-loss from a fjord environment
A numerical model study of the main factors contributing to hypoxia and its interannual and short-term variability in the East China Sea
The effects of decomposing invasive jellyfish on biogeochemical fluxes and microbial dynamics in an ultra-oligotrophic sea
Le Zhang and Z. George Xue
Biogeosciences, 19, 4589–4618, https://doi.org/10.5194/bg-19-4589-2022, https://doi.org/10.5194/bg-19-4589-2022, 2022
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We adopt a high-resolution carbon model for the Gulf of Mexico (GoM) and calculate the decadal trends of important carbon system variables in the GoM from 2001 to 2019. The GoM surface CO2 values experienced a steady increase over the past 2 decades, and the ocean surface pH is declining. Although carbonate saturation rates remain supersaturated with aragonite, they show a slightly decreasing trend. The northern GoM is a stronger carbon sink than we thought.
Michael M. Whitney
Biogeosciences, 19, 4479–4497, https://doi.org/10.5194/bg-19-4479-2022, https://doi.org/10.5194/bg-19-4479-2022, 2022
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Coastal hypoxia is a major environmental problem of increasing severity. The 21st-century projections analyzed indicate global coastal waters will warm and experience rapid declines in oxygen. The forecasted median coastal trends for increasing sea surface temperature and decreasing oxygen capacity are 48 % and 18 % faster than the rates observed over the last 4 decades. Existing hypoxic areas are expected to worsen, and new hypoxic areas likely will emerge under these warming-related pressures.
Bryce Van Dam, Nele Lehmann, Mary A. Zeller, Andreas Neumann, Daniel Pröfrock, Marko Lipka, Helmuth Thomas, and Michael Ernst Böttcher
Biogeosciences, 19, 3775–3789, https://doi.org/10.5194/bg-19-3775-2022, https://doi.org/10.5194/bg-19-3775-2022, 2022
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We quantified sediment–water exchange at shallow sites in the North and Baltic seas. We found that porewater irrigation rates in the former were approximately twice as high as previously estimated, likely driven by relatively high bioirrigative activity. In contrast, we found small net fluxes of alkalinity, ranging from −35 µmol m−2 h−1 (uptake) to 53 µmol m−2 h−1 (release). We attribute this to low net denitrification, carbonate mineral (re-)precipitation, and sulfide (re-)oxidation.
Jiaying Abby Guo, Robert Strzepek, Anusuya Willis, Aaron Ferderer, and Lennart Thomas Bach
Biogeosciences, 19, 3683–3697, https://doi.org/10.5194/bg-19-3683-2022, https://doi.org/10.5194/bg-19-3683-2022, 2022
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Ocean alkalinity enhancement is a CO2 removal method with significant potential, but it can lead to a perturbation of the ocean with trace metals such as nickel. This study tested the effect of increasing nickel concentrations on phytoplankton growth and photosynthesis. We found that the response to nickel varied across the 11 phytoplankton species tested here, but the majority were rather insensitive. We note, however, that responses may be different under other experimental conditions.
Malcolm E. Scully, W. Rockwell Geyer, David Borkman, Tracy L. Pugh, Amy Costa, and Owen C. Nichols
Biogeosciences, 19, 3523–3536, https://doi.org/10.5194/bg-19-3523-2022, https://doi.org/10.5194/bg-19-3523-2022, 2022
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For two consecutive summers, the bottom waters in southern Cape Cod Bay became severely depleted of dissolved oxygen. Low oxygen levels in bottom waters have never been reported in this area before, and this unprecedented occurrence is likely the result of a new algae species that recently began blooming during the late-summer months. We present data suggesting that blooms of this new species are the result of regional climate change including warmer waters and changes in summer winds.
Zheng Chen, Bin Wang, Chuang Xu, Zhongren Zhang, Shiyu Li, and Jiatang Hu
Biogeosciences, 19, 3469–3490, https://doi.org/10.5194/bg-19-3469-2022, https://doi.org/10.5194/bg-19-3469-2022, 2022
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Deterioration of low-oxygen conditions in the coastal waters off Hong Kong was revealed by monitoring data over two decades. The declining wind forcing and the increasing nutrient input contributed significantly to the areal expansion and intense deterioration of low-oxygen conditions. Also, the exacerbated eutrophication drove a shift in the dominant source of organic matter from terrestrial inputs to in situ primary production, which has probably led to an earlier onset of hypoxia in summer.
Lin Yang, Jing Zhang, Anja Engel, and Gui-Peng Yang
Biogeosciences Discuss., https://doi.org/10.5194/bg-2022-140, https://doi.org/10.5194/bg-2022-140, 2022
Revised manuscript accepted for BG
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EFs of DOM in the eastern marginal seas of China exhibited a significant spatiotemporal variation. Photochemical and enrichment processes co-regulated DOM enrichment in the SML. Autochthonous DOM was more frequently enriched in the SML than terrestrial DOM. DOM in the SSW exhibited higher aromaticity than that in the SML.
Mona Norbisrath, Johannes Pätsch, Kirstin Dähnke, Tina Sanders, Gesa Schulz, Justus Engbertus Eduard van Beusekom, and Helmuth Thomas
Biogeosciences Discuss., https://doi.org/10.5194/bg-2022-143, https://doi.org/10.5194/bg-2022-143, 2022
Revised manuscript accepted for BG
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Total alkalinity (TA) regulates the oceanic storage capacity of atmospheric CO2. TA is also metabolically generated in estuaries and influences coastal carbon storage through its inflows. We used water samples and identified the Hamburg port area as the one with highest TA generation. Of the overall riverine TA load, 14 % are generated within the estuary. Using a biogeochemical model, we estimated potential effects on the coastal carbon storage under possible anthropogenic and climate changes.
Stella-Theresa Stoicescu, Jaan Laanemets, Taavi Liblik, Māris Skudra, Oliver Samlas, Inga Lips, and Urmas Lips
Biogeosciences, 19, 2903–2920, https://doi.org/10.5194/bg-19-2903-2022, https://doi.org/10.5194/bg-19-2903-2022, 2022
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Coastal basins with high input of nutrients often suffer from oxygen deficiency. In summer 2018, the extent of oxygen depletion was exceptional in the Gulf of Riga. We analyzed observational data and found that extensive oxygen deficiency appeared since the water layer close to the seabed, where oxygen is consumed, was separated from the surface layer. The problem worsens if similar conditions restricting vertical transport of oxygen occur more frequently in the future.
Justin C. Tiano, Jochen Depestele, Gert Van Hoey, João Fernandes, Pieter van Rijswijk, and Karline Soetaert
Biogeosciences, 19, 2583–2598, https://doi.org/10.5194/bg-19-2583-2022, https://doi.org/10.5194/bg-19-2583-2022, 2022
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This study gives an assessment of bottom trawling on physical, chemical, and biological characteristics in a location known for its strong currents and variable habitats. Although trawl gears only removed the top 1 cm of the seabed surface, impacts on reef-building tubeworms significantly decreased carbon and nutrient cycling. Lighter trawls slightly reduced the impact on fauna and nutrients. Tubeworms were strongly linked to biogeochemical and faunal aspects before but not after trawling.
Inda Brinkmann, Christine Barras, Tom Jilbert, Tomas Næraa, K. Mareike Paul, Magali Schweizer, and Helena L. Filipsson
Biogeosciences, 19, 2523–2535, https://doi.org/10.5194/bg-19-2523-2022, https://doi.org/10.5194/bg-19-2523-2022, 2022
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The concentration of the trace metal barium (Ba) in coastal seawater is a function of continental input, such as riverine discharge. Our geochemical records of the severely hot and dry year 2018, and following wet year 2019, reveal that prolonged drought imprints with exceptionally low Ba concentrations in benthic foraminiferal calcium carbonates of coastal sediments. This highlights the potential of benthic Ba / Ca to trace past climate extremes and variability in coastal marine records.
Shichao Tian, Birgit Gaye, Jianhui Tang, Yongming Luo, Wenguo Li, Niko Lahajnar, Kirstin Dähnke, Tina Sanders, Tianqi Xiong, Weidong Zhai, and Kay-Christian Emeis
Biogeosciences, 19, 2397–2415, https://doi.org/10.5194/bg-19-2397-2022, https://doi.org/10.5194/bg-19-2397-2022, 2022
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We constrain the nitrogen budget and in particular the internal sources and sinks of nitrate in the Bohai Sea by using a mass-based and dual stable isotope approach based on δ15N and δ18O of nitrate. Based on available mass fluxes and isotope data an updated nitrogen budget is proposed. Compared to previous estimates, it is more complete and includes the impact of the interior cycle (nitrification) on the nitrate pool. The main external nitrogen sources are rivers contributing 19.2 %–25.6 %.
Gesa Schulz, Tina Sanders, Justus E. E. van Beusekom, Yoana G. Voynova, Andreas Schöl, and Kirstin Dähnke
Biogeosciences, 19, 2007–2024, https://doi.org/10.5194/bg-19-2007-2022, https://doi.org/10.5194/bg-19-2007-2022, 2022
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Estuaries can significantly alter nutrient loads before reaching coastal waters. Our study of the heavily managed Ems estuary (Northern Germany) reveals three zones of nitrogen turnover along the estuary with water-column denitrification in the most upstream hyper-turbid part, nitrate production in the middle reaches and mixing/nitrate uptake in the North Sea. Suspended particulate matter was the overarching control on nitrogen cycling in the hyper-turbid estuary.
Wiley Evans, Geoffrey T. Lebon, Christen D. Harrington, Yuichiro Takeshita, and Allison Bidlack
Biogeosciences, 19, 1277–1301, https://doi.org/10.5194/bg-19-1277-2022, https://doi.org/10.5194/bg-19-1277-2022, 2022
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Information on the marine carbon dioxide system along the northeast Pacific Inside Passage has been limited. To address this gap, we instrumented an Alaskan ferry in order to characterize the marine carbon dioxide system in this region. Data over a 2-year period were used to assess drivers of the observed variability, identify the timing of severe conditions, and assess the extent of contemporary ocean acidification as well as future levels consistent with a 1.5 °C warmer climate.
Melissa Ward, Tye L. Kindinger, Heidi K. Hirsh, Tessa M. Hill, Brittany M. Jellison, Sarah Lummis, Emily B. Rivest, George G. Waldbusser, Brian Gaylord, and Kristy J. Kroeker
Biogeosciences, 19, 689–699, https://doi.org/10.5194/bg-19-689-2022, https://doi.org/10.5194/bg-19-689-2022, 2022
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Here, we synthesize the results from 62 studies reporting in situ rates of seagrass metabolism to highlight spatial and temporal variability in oxygen fluxes and inform efforts to use seagrass to mitigate ocean acidification. Our analyses suggest seagrass meadows are generally autotrophic and variable in space and time, and the effects on seawater oxygen are relatively small in magnitude.
Shao-Min Chen, Ulf Riebesell, Kai G. Schulz, Elisabeth von der Esch, Eric P. Achterberg, and Lennart T. Bach
Biogeosciences, 19, 295–312, https://doi.org/10.5194/bg-19-295-2022, https://doi.org/10.5194/bg-19-295-2022, 2022
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Oxygen minimum zones in the ocean are characterized by enhanced carbon dioxide (CO2) levels and are being further acidified by increasing anthropogenic atmospheric CO2. Here we report CO2 system measurements in a mesocosm study offshore Peru during a rare coastal El Niño event to investigate how CO2 dynamics may respond to ongoing ocean deoxygenation. Our observations show that nitrogen limitation, productivity, and plankton community shift play an important role in driving the CO2 dynamics.
Sachi Umezawa, Manami Tozawa, Yuichi Nosaka, Daiki Nomura, Hiroji Onishi, Hiroto Abe, Tetsuya Takatsu, and Atsushi Ooki
Biogeosciences Discuss., https://doi.org/10.5194/bg-2021-357, https://doi.org/10.5194/bg-2021-357, 2022
Revised manuscript accepted for BG
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We conducted time-series observations in Funka Bay, Japan, during the spring bloom 2019. We found reductions in nutrient concentrations in the dark subsurface layer in the bloom. Incubation experiment confirmed that diatom could consume nutrients at substantial rate even in darkness. We concluded that nutrient reduction was caused by dark consumption by diatoms that had grown in the surface euphotic layer and then sank to the dark subsurface layer.
Paula Maria Salgado-Hernanz, Aurore Regaudie-de-Gioux, David Antoine, and Gotzon Basterretxea
Biogeosciences, 19, 47–69, https://doi.org/10.5194/bg-19-47-2022, https://doi.org/10.5194/bg-19-47-2022, 2022
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For the first time, this study presents the characteristics of primary production in coastal regions of the Mediterranean Sea based on satellite-borne observations for the period 2002–2016. The study concludes that there are significant spatial and temporal variations among different regions. Quantifying primary production is of special importance in the marine food web and in the sequestration of carbon dioxide from the atmosphere to the deep waters.
Samu Elovaara, Eeva Eronen-Rasimus, Eero Asmala, Tobias Tamelander, and Hermanni Kaartokallio
Biogeosciences, 18, 6589–6616, https://doi.org/10.5194/bg-18-6589-2021, https://doi.org/10.5194/bg-18-6589-2021, 2021
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Dissolved organic matter (DOM) is a significant carbon pool in the marine environment. The composition of the DOM pool, as well as its interaction with microbes, is complex, yet understanding it is important for understanding global carbon cycling. This study shows that two phytoplankton species have different effects on the composition of the DOM pool and, through the DOM they produce, on the ensuing microbial community. These communities in turn have different effects on DOM composition.
Yuan Dong, Qian P. Li, Zhengchao Wu, Yiping Shuai, Zijia Liu, Zaiming Ge, Weiwen Zhou, and Yinchao Chen
Biogeosciences, 18, 6423–6434, https://doi.org/10.5194/bg-18-6423-2021, https://doi.org/10.5194/bg-18-6423-2021, 2021
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Temporal change of plankton growth and grazing are less known in the coastal ocean, not to mention the relevant controlling mechanisms. Here, we performed monthly size-specific dilution experiments outside a eutrophic estuary over a 1-year cycle. Phytoplankton growth was correlated to nutrients and grazing mortality to total chlorophyll a. A selective grazing on small cells may be important for maintaining high abundance of large-chain-forming diatoms in this eutrophic system.
Kiefer O. Forsch, Lisa Hahn-Woernle, Robert M. Sherrell, Vincent J. Roccanova, Kaixuan Bu, David Burdige, Maria Vernet, and Katherine A. Barbeau
Biogeosciences, 18, 6349–6375, https://doi.org/10.5194/bg-18-6349-2021, https://doi.org/10.5194/bg-18-6349-2021, 2021
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We show that for an unperturbed cold western Antarctic Peninsula fjord, the seasonality of iron and manganese is linked to the dispersal of metal-rich meltwater sources. Geochemical measurements of trace metals in meltwaters, porewaters, and seawater, collected during two expeditions, showed a seasonal cycle of distinct sources. Finally, model results revealed that the dispersal of surface meltwater and meltwater plumes originating from under the glacier is sensitive to katabatic wind events.
Jenny Hieronymus, Kari Eilola, Malin Olofsson, Inga Hense, H. E. Markus Meier, and Elin Almroth-Rosell
Biogeosciences, 18, 6213–6227, https://doi.org/10.5194/bg-18-6213-2021, https://doi.org/10.5194/bg-18-6213-2021, 2021
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Dense blooms of cyanobacteria occur every summer in the Baltic Proper and can add to eutrophication by their ability to turn nitrogen gas into dissolved inorganic nitrogen. Being able to correctly estimate the size of this nitrogen fixation is important for management purposes. In this work, we find that the life cycle of cyanobacteria plays an important role in capturing the seasonality of the blooms as well as the size of nitrogen fixation in our ocean model.
Tom Hull, Naomi Greenwood, Antony Birchill, Alexander Beaton, Matthew Palmer, and Jan Kaiser
Biogeosciences, 18, 6167–6180, https://doi.org/10.5194/bg-18-6167-2021, https://doi.org/10.5194/bg-18-6167-2021, 2021
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The shallow shelf seas play a large role in the global cycling of CO2 and also support large fisheries. We use an autonomous underwater vehicle in the central North Sea to measure the rates of change in oxygen and nutrients.
Using these data we determine the amount of carbon dioxide taken out of the atmosphere by the sea and measure how productive the region is.
These observations will be useful for improving our predictive models and help us predict and adapt to a changing ocean.
Puthenveettil Narayana Menon Vinayachandran, Yukio Masumoto, Michael J. Roberts, Jenny A. Huggett, Issufo Halo, Abhisek Chatterjee, Prakash Amol, Garuda V. M. Gupta, Arvind Singh, Arnab Mukherjee, Satya Prakash, Lynnath E. Beckley, Eric Jorden Raes, and Raleigh Hood
Biogeosciences, 18, 5967–6029, https://doi.org/10.5194/bg-18-5967-2021, https://doi.org/10.5194/bg-18-5967-2021, 2021
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Upwelling in the coastal ocean triggers biological productivity and thus enhances fisheries. Therefore, understanding the phenomenon of upwelling and the underlying mechanisms is important. In this paper, the present understanding of the upwelling along the coastline of the Indian Ocean from the coast of Africa all the way up to the coast of Australia is reviewed. The review provides a synthesis of the physical processes associated with upwelling and its impact on the marine ecosystem.
Gaël Many, Caroline Ulses, Claude Estournel, and Patrick Marsaleix
Biogeosciences, 18, 5513–5538, https://doi.org/10.5194/bg-18-5513-2021, https://doi.org/10.5194/bg-18-5513-2021, 2021
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The Gulf of Lion shelf is one of the most productive areas in the Mediterranean. A model is used to study the mechanisms that drive the particulate organic carbon (POC). The model reproduces the annual cycle of primary production well. The shelf appears as an autotrophic ecosystem with a high production and as a source of POC for the adjacent basin. The increase in temperature induced by climate change could impact the trophic status of the shelf.
Alireza Merikhi, Peter Berg, and Markus Huettel
Biogeosciences, 18, 5381–5395, https://doi.org/10.5194/bg-18-5381-2021, https://doi.org/10.5194/bg-18-5381-2021, 2021
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The aquatic eddy covariance technique is a powerful method for measurements of solute fluxes across the sediment–water interface. Data measured by conventional eddy covariance instruments require a time shift correction that can result in substantial flux errors. We introduce a triple O2 sensor eddy covariance instrument that by design eliminates these errors. Deployments next to a conventional instrument in the Florida Keys demonstrate the improvements achieved through the new design.
Jiatang Hu, Zhongren Zhang, Bin Wang, and Jia Huang
Biogeosciences, 18, 5247–5264, https://doi.org/10.5194/bg-18-5247-2021, https://doi.org/10.5194/bg-18-5247-2021, 2021
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In situ observations over 42 years were used to explore the long-term changes to low-oxygen conditions in the Pearl River estuary. Apparent expansion of the low-oxygen conditions in summer was identified, primarily due to the combined effects of increased anthropogenic inputs and decreased sediment load. Large areas of severe low-oxygen events were also observed in early autumn and were formed by distinct mechanisms. The estuary seems to be growing into a seasonal, estuary-wide hypoxic zone.
Indah Ardiningsih, Kyyas Seyitmuhammedov, Sylvia G. Sander, Claudine H. Stirling, Gert-Jan Reichart, Kevin R. Arrigo, Loes J. A. Gerringa, and Rob Middag
Biogeosciences, 18, 4587–4601, https://doi.org/10.5194/bg-18-4587-2021, https://doi.org/10.5194/bg-18-4587-2021, 2021
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Organic Fe speciation is investigated along a natural gradient of the western Antarctic Peninsula from an ice-covered shelf to the open ocean. The two major fronts in the region affect the distribution of ligands. The excess ligands not bound to dissolved Fe (DFe) comprised up to 80 % of the total ligand concentrations, implying the potential to solubilize additional Fe input. The ligands on the shelf can increase the DFe residence time and fuel local primary production upon ice melt.
Melissa R. McCutcheon, Hongming Yao, Cory J. Staryk, and Xinping Hu
Biogeosciences, 18, 4571–4586, https://doi.org/10.5194/bg-18-4571-2021, https://doi.org/10.5194/bg-18-4571-2021, 2021
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We used 5+ years of discrete samples and 10 months of hourly sensor measurements to explore temporal variability and environmental controls on pH and pCO2 at the Aransas Ship Channel. Seasonal and diel variability were both present but small compared to other regions in the literature. Despite the small tidal range, tidal control often surpassed biological control. In comparison with sensor data, discrete samples were generally representative of mean annual and seasonal carbonate chemistry.
Kai G. Schulz, Eric P. Achterberg, Javier Arístegui, Lennart T. Bach, Isabel Baños, Tim Boxhammer, Dirk Erler, Maricarmen Igarza, Verena Kalter, Andrea Ludwig, Carolin Löscher, Jana Meyer, Judith Meyer, Fabrizio Minutolo, Elisabeth von der Esch, Bess B. Ward, and Ulf Riebesell
Biogeosciences, 18, 4305–4320, https://doi.org/10.5194/bg-18-4305-2021, https://doi.org/10.5194/bg-18-4305-2021, 2021
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Upwelling of nutrient-rich deep waters to the surface make eastern boundary upwelling systems hot spots of marine productivity. This leads to subsurface oxygen depletion and the transformation of bioavailable nitrogen into inert N2. Here we quantify nitrogen loss processes following a simulated deep water upwelling. Denitrification was the dominant process, and budget calculations suggest that a significant portion of nitrogen that could be exported to depth is already lost in the surface ocean.
Heiner Dietze and Ulrike Löptien
Biogeosciences, 18, 4243–4264, https://doi.org/10.5194/bg-18-4243-2021, https://doi.org/10.5194/bg-18-4243-2021, 2021
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In recent years fish-kill events caused by oxygen deficit have been reported in Eckernförde Bight (Baltic Sea). This study sets out to understand the processes causing respective oxygen deficits by combining high-resolution coupled ocean circulation biogeochemical modeling, monitoring data, and artificial intelligence.
Jens A. Hölemann, Bennet Juhls, Dorothea Bauch, Markus Janout, Boris P. Koch, and Birgit Heim
Biogeosciences, 18, 3637–3655, https://doi.org/10.5194/bg-18-3637-2021, https://doi.org/10.5194/bg-18-3637-2021, 2021
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The Arctic Ocean receives large amounts of river water rich in terrestrial dissolved organic matter (tDOM), which is an important component of the Arctic carbon cycle. Our analysis shows that mixing of three major freshwater sources is the main factor that regulates the distribution of tDOM concentrations in the Siberian shelf seas. In this context, the formation and melting of the land-fast ice in the Laptev Sea and the peak spring discharge of the Lena River are of particular importance.
Jaard Hauschildt, Soeren Thomsen, Vincent Echevin, Andreas Oschlies, Yonss Saranga José, Gerd Krahmann, Laura A. Bristow, and Gaute Lavik
Biogeosciences, 18, 3605–3629, https://doi.org/10.5194/bg-18-3605-2021, https://doi.org/10.5194/bg-18-3605-2021, 2021
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In this paper we quantify the subduction of upwelled nitrate due to physical processes on the order of several kilometers in the coastal upwelling off Peru and its effect on primary production. We also compare the prepresentation of these processes in a high-resolution simulation (~2.5 km) with a more coarsely resolved simulation (~12 km). To do this, we combine high-resolution shipboard observations of physical and biogeochemical parameters with a complex biogeochemical model configuration.
Samantha A. Siedlecki, Darren Pilcher, Evan M. Howard, Curtis Deutsch, Parker MacCready, Emily L. Norton, Hartmut Frenzel, Jan Newton, Richard A. Feely, Simone R. Alin, and Terrie Klinger
Biogeosciences, 18, 2871–2890, https://doi.org/10.5194/bg-18-2871-2021, https://doi.org/10.5194/bg-18-2871-2021, 2021
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Future ocean conditions can be simulated using projected trends in fossil fuel use paired with Earth system models. Global models generally do not include local processes important to coastal ecosystems. These coastal processes can alter the degree of change projected. Higher-resolution models that include local processes predict modified changes in carbon stressors when compared to changes projected by global models in the California Current System.
Erik Jacobs, Henry C. Bittig, Ulf Gräwe, Carolyn A. Graves, Michael Glockzin, Jens D. Müller, Bernd Schneider, and Gregor Rehder
Biogeosciences, 18, 2679–2709, https://doi.org/10.5194/bg-18-2679-2021, https://doi.org/10.5194/bg-18-2679-2021, 2021
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We use a unique data set of 8 years of continuous carbon dioxide (CO2) and methane (CH4) surface water measurements from a commercial ferry to study upwelling in the Baltic Sea. Its seasonality and regional and interannual variability are examined. Strong upwelling events drastically increase local surface CO2 and CH4 levels and are mostly detected in late summer after long periods of impaired mixing. We introduce an extrapolation method to estimate regional upwelling-induced trace gas fluxes.
Yangyang Zhao, Khanittha Uthaipan, Zhongming Lu, Yan Li, Jing Liu, Hongbin Liu, Jianping Gan, Feifei Meng, and Minhan Dai
Biogeosciences, 18, 2755–2775, https://doi.org/10.5194/bg-18-2755-2021, https://doi.org/10.5194/bg-18-2755-2021, 2021
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In situ oxygen consumption rates were estimated for the first time during destruction of coastal hypoxia as disturbed by a typhoon and its reinstatement in the South China Sea off the Pearl River estuary. The reinstatement of summer hypoxia was rapid with a comparable timescale with that of its initial disturbance from frequent tropical cyclones, which has important implications for better understanding the intermittent nature of coastal hypoxia and its prediction in a changing climate.
Dylan R. Brown, Humberto Marotta, Roberta B. Peixoto, Alex Enrich-Prast, Glenda C. Barroso, Mario L. G. Soares, Wilson Machado, Alexander Pérez, Joseph M. Smoak, Luciana M. Sanders, Stephen Conrad, James Z. Sippo, Isaac R. Santos, Damien T. Maher, and Christian J. Sanders
Biogeosciences, 18, 2527–2538, https://doi.org/10.5194/bg-18-2527-2021, https://doi.org/10.5194/bg-18-2527-2021, 2021
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Hypersaline tidal flats (HTFs) are coastal ecosystems with freshwater deficits often occurring in arid or semi-arid regions near mangrove supratidal zones with no major fluvial contributions. This study shows that HTFs are important carbon and nutrient sinks which may be significant given their extensive coverage. Our findings highlight a previously unquantified carbon as well as a nutrient sink and suggest that coastal HTF ecosystems could be included in the emerging blue carbon framework.
Giulia Bonino, Elisa Lovecchio, Nicolas Gruber, Matthias Münnich, Simona Masina, and Doroteaciro Iovino
Biogeosciences, 18, 2429–2448, https://doi.org/10.5194/bg-18-2429-2021, https://doi.org/10.5194/bg-18-2429-2021, 2021
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Seasonal variations of processes such as upwelling and biological production that happen along the northwestern African coast can modulate the temporal variability of the biological activity of the adjacent open North Atlantic hundreds of kilometers away from the coast thanks to the lateral transport of coastal organic carbon. This happens with a temporal delay, which is smaller than a season up to roughly 500 km from the coast due to the intense transport by small-scale filaments.
Markus Diesing, Terje Thorsnes, and Lilja Rún Bjarnadóttir
Biogeosciences, 18, 2139–2160, https://doi.org/10.5194/bg-18-2139-2021, https://doi.org/10.5194/bg-18-2139-2021, 2021
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The upper 10 cm of the seafloor of the North Sea and Skagerrak contain 231×106 t of carbon in organic form. The Norwegian Trough, the deepest sedimentary basin in the studied area, stands out as a zone of strong organic carbon accumulation with rates on par with neighbouring fjords. Conversely, large parts of the North Sea are characterised by rapid organic carbon degradation and negligible accumulation. This dual character is likely typical for continental shelf sediments worldwide.
Arnaud Laurent, Katja Fennel, and Angela Kuhn
Biogeosciences, 18, 1803–1822, https://doi.org/10.5194/bg-18-1803-2021, https://doi.org/10.5194/bg-18-1803-2021, 2021
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CMIP5 and CMIP6 models, and a high-resolution regional model, were evaluated by comparing historical simulations with observations in the northwest North Atlantic, a climate-sensitive and biologically productive ocean margin region. Many of the CMIP models performed poorly for biological properties. There is no clear link between model resolution and skill in the global models, but there is an overall improvement in performance in CMIP6 from CMIP5. The regional model performed best.
Heejun Han, Jeomshik Hwang, and Guebuem Kim
Biogeosciences, 18, 1793–1801, https://doi.org/10.5194/bg-18-1793-2021, https://doi.org/10.5194/bg-18-1793-2021, 2021
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The main source of excess DOC occurring in coastal seawater off an artificial lake, which is enclosed by a dike along the western coast of South Korea, was determined using a combination of various biogeochemical tools including DOC and nutrient concentrations, stable carbon isotope, and optical properties (absorbance and fluorescence) of dissolved organic matter in two different seasons (March 2017 and September 2018).
Michelle N. Simone, Kai G. Schulz, Joanne M. Oakes, and Bradley D. Eyre
Biogeosciences, 18, 1823–1838, https://doi.org/10.5194/bg-18-1823-2021, https://doi.org/10.5194/bg-18-1823-2021, 2021
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Estuaries are responsible for a large contribution of dissolved organic carbon (DOC) to the global C cycle, but it is unknown how this will change in the future. DOC fluxes from unvegetated sediments were investigated ex situ subject to conditions of warming and ocean acidification. The future climate shifted sediment fluxes from a slight DOC source to a significant sink, with global coastal DOC export decreasing by 80 %. This has global implications for C cycling and long-term C storage.
Sara González-Delgado, David González-Santana, Magdalena Santana-Casiano, Melchor González-Dávila, Celso A. Hernández, Carlos Sangil, and José Carlos Hernández
Biogeosciences, 18, 1673–1687, https://doi.org/10.5194/bg-18-1673-2021, https://doi.org/10.5194/bg-18-1673-2021, 2021
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We describe the carbon system dynamics of a new CO2 seep system located off the coast of La Palma. We explored for over a year, finding points with lower levels of pH and alkalinity; high levels of carbon; and poorer levels of aragonite and calcite, both essential for calcifying species. The seeps are a key feature for robust experimental designs, aimed at comprehending how life has persisted through past eras or at predicting the consequences of ocean acidification in the marine realm.
Cale A. Miller, Christina Bonsell, Nathan D. McTigue, and Amanda L. Kelley
Biogeosciences, 18, 1203–1221, https://doi.org/10.5194/bg-18-1203-2021, https://doi.org/10.5194/bg-18-1203-2021, 2021
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We report here the first year-long high-frequency pH data set for an Arctic lagoon that captures ice-free and ice-covered seasons. pH and salinity correlation varies by year as we observed positive correlation and independence. Photosynthesis is found to drive high pH values, and small changes in underwater solar radiation can result in rapid decreases in pH. We estimate that arctic lagoons may act as sources of CO2 to the atmosphere, potentially offsetting the Arctic Ocean's CO2 sink capacity.
Meike Becker, Are Olsen, Peter Landschützer, Abdirhaman Omar, Gregor Rehder, Christian Rödenbeck, and Ingunn Skjelvan
Biogeosciences, 18, 1127–1147, https://doi.org/10.5194/bg-18-1127-2021, https://doi.org/10.5194/bg-18-1127-2021, 2021
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We developed a simple method to refine existing open-ocean maps towards different coastal seas. Using a multi-linear regression, we produced monthly maps of surface ocean fCO2 in the northern European coastal seas (the North Sea, the Baltic Sea, the Norwegian Coast and the Barents Sea) covering a time period from 1998 to 2016. Based on this fCO2 map, we calculate trends in surface ocean fCO2, pH and the air–sea gas exchange.
Zhengchao Wu, Qian P. Li, Zaiming Ge, Bangqin Huang, and Chunming Dong
Biogeosciences, 18, 1049–1065, https://doi.org/10.5194/bg-18-1049-2021, https://doi.org/10.5194/bg-18-1049-2021, 2021
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Seasonal hypoxia in the nearshore bottom waters frequently occurs in the Pearl River estuary. Aerobic respiration is the ultimate cause of local hypoxia. We found an elevated level of polyunsaturated aldehydes in the bottom water outside the estuary, which promoted the growth and metabolism of special groups of particle-attached bacteria and thus contributed to oxygen depletion in hypoxic waters. Our results may be important for understanding coastal hypoxia and its linkages to eutrophication.
Derara Hailegeorgis, Zouhair Lachkar, Christoph Rieper, and Nicolas Gruber
Biogeosciences, 18, 303–325, https://doi.org/10.5194/bg-18-303-2021, https://doi.org/10.5194/bg-18-303-2021, 2021
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Using a Lagrangian modeling approach, this study provides a quantitative analysis of water and nitrogen offshore transport in the Canary Current System. We investigate the timescales, reach and structure of offshore transport and demonstrate that the Canary upwelling is a key source of nutrients to the open North Atlantic Ocean. Our findings stress the need for improving the representation of the Canary system and other eastern boundary upwelling systems in global coarse-resolution models.
Constance Choquel, Emmanuelle Geslin, Edouard Metzger, Helena L. Filipsson, Nils Risgaard-Petersen, Patrick Launeau, Manuel Giraud, Thierry Jauffrais, Bruno Jesus, and Aurélia Mouret
Biogeosciences, 18, 327–341, https://doi.org/10.5194/bg-18-327-2021, https://doi.org/10.5194/bg-18-327-2021, 2021
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Marine microorganisms such as foraminifera are able to live temporarily without oxygen in sediments. In a Swedish fjord subjected to seasonal oxygen scarcity, a change in fauna linked to the decrease in oxygen and the increase in an invasive species was shown. The invasive species respire nitrate until 100 % of the nitrate porewater in the sediment and could be a major contributor to nitrogen balance in oxic coastal ecosystems. But prolonged hypoxia creates unfavorable conditions to survive.
Haiyan Zhang, Katja Fennel, Arnaud Laurent, and Changwei Bian
Biogeosciences, 17, 5745–5761, https://doi.org/10.5194/bg-17-5745-2020, https://doi.org/10.5194/bg-17-5745-2020, 2020
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In coastal seas, low oxygen, which is detrimental to coastal ecosystems, is increasingly caused by man-made nutrients from land. This is especially so near mouths of major rivers, including the Changjiang in the East China Sea. Here a simulation model is used to identify the main factors determining low-oxygen conditions in the region. High river discharge is identified as the prime cause, while wind and intrusions of open-ocean water modulate the severity and extent of low-oxygen conditions.
Tamar Guy-Haim, Maxim Rubin-Blum, Eyal Rahav, Natalia Belkin, Jacob Silverman, and Guy Sisma-Ventura
Biogeosciences, 17, 5489–5511, https://doi.org/10.5194/bg-17-5489-2020, https://doi.org/10.5194/bg-17-5489-2020, 2020
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The availability of nutrients in oligotrophic marine ecosystems is limited. Following jellyfish blooms, large die-off events result in the release of high amounts of nutrients to the water column and sediment. Our study assessed the decomposition effects of an infamous invasive jellyfish in the ultra-oligotrophic Eastern Mediterranean Sea. We found that jellyfish decomposition favored heterotrophic bacteria and altered biogeochemical fluxes, further impoverishing this nutrient-poor ecosystem.
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Short summary
The Peruvian system supports 10 % of the world's fishing yield. In the Peruvian system, wind and earth’s rotation bring cold, nutrient-rich water to the surface and allow phytoplankton to grow. But observations show that it grows worse at high upwelling. Using a model, we find that high upwelling happens when air mixes the water the most. Then phytoplankton is diluted and grows slowly due to low light and cool upwelled water. This study helps to estimate how it might change in a warming climate.
The Peruvian system supports 10 % of the world's fishing yield. In the Peruvian system, wind and...
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