Articles | Volume 13, issue 10
https://doi.org/10.5194/bg-13-2971-2016
© Author(s) 2016. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
Special issue:
https://doi.org/10.5194/bg-13-2971-2016
© Author(s) 2016. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
Research article
| 
20 May 2016
Research article |
| 20 May 2016
Biogeochemical characteristics of a long-lived anticyclonic eddy in the eastern South Pacific Ocean
Marcela Cornejo D'Ottone
CORRESPONDING AUTHOR
Escuela de Ciencias del Mar, Pontificia Universidad Católica de
Valparaíso, P.O. Box 1020, Valparaíso Chile and Millennium
Institute of Oceanography, Valparaíso, Chile
Luis Bravo
Centro de Estudios Avanzados en Zonas Áridas (CEAZA), Facultad de
Ciencias del Mar, Universidad Católica del Norte & Millennium Nucleus
for Ecology and Sustainable Management of Oceanic Islands (ESMOI), Coquimbo,
Chile
Marcel Ramos
Departamento de Biología Marina, Facultad de Ciencias del Mar,
Universidad Católica del Norte & Millennium Nucleus for Ecology and
Sustainable Management of Oceanic Islands (ESMOI) &Centro de Estudios
Avanzados en Zonas Áridas (CEAZA), Coquimbo, Chile
Oscar Pizarro
Department of Geophysics, University of Concepcion, Chile and Millennium
Institute of Oceanography, Concepción, Chile
Johannes Karstensen
Physical Oceanography, GEOMAR Helmholtz Centre for Ocean Research Kiel, Kiel, Germany
Mauricio Gallegos
Departamento de Ecología, Pontificia Universidad Católica de
Chile, Santiago, Chile
Marco Correa-Ramirez
Escuela de Ciencias del Mar, Pontificia Universidad Católica de
Valparaíso, P.O. Box 1020, Chile and Instituto Milenio
de Oceanografía (IMO), Valparaíso, Chile
Nelson Silva
Escuela de Ciencias del Mar, Pontificia Universidad Católica de
Valparaíso, P.O. Box 1020, Valparaíso, Chile
Laura Farias
Departamento de Oceanografía, Centro ciencia de Clima y la
Resielcia (CR2) and Instituto Milenio de Oceanografia (IMO), Concepción, Chile
Lee Karp-Boss
School of Marine Science, University of Maine, Orono, ME 04469, USA
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Guillaume Bourdin, Lee Karp-Boss, Fabien Lombard, Gabriel Gorsky, and Emmanuel Boss
Biogeosciences, 22, 3207–3233, https://doi.org/10.5194/bg-22-3207-2025, https://doi.org/10.5194/bg-22-3207-2025, 2025
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Remote islands and atolls create unique oceanic processes that affect the surrounding waters, known as the island mass effect (IME). These processes input nutrients to the ocean surface, leading to an increasing phytoplankton concentration near islands. We combine data from various satellites and modeled currents to better track these changes. This reveals a larger IME impact than previously estimated, suggesting that islands play a more significant role in ocean food chains in subtropical regions.
Zoé Mériguet, Guillaume Bourdin, Nathaniel Kristan, Laetitia Jalabert, Olivier Bun, Marc Picheral, Louis Caray-Counil, Juliette Maury, Maria-Luiza Pedrotti, Amanda Elineau, David A. Paz-Garcia, Lee Karp-Boss, Gaby Gorsky, Fabien Lombard, and the Tara Pacific Consortium Coordinators team
Earth Syst. Sci. Data, 17, 2761–2792, https://doi.org/10.5194/essd-17-2761-2025, https://doi.org/10.5194/essd-17-2761-2025, 2025
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This study presents imaging datasets from the Tara Pacific expedition, covering multiple plankton sizes and a wide sampling area in Pacific waters. By sampling both open-ocean and island areas, these data can show how plankton size, diversity and abundance change with different environments. We also highlight the usefulness of high-speed plankton sampling when it is not possible to slow the boat during sailing as well as the value of this technique with respect to extending the sampling coverage and frequency.
Manuel Torres-Godoy, Oscar Pizarro, Boris Dewitte, and Vera Oerder
EGUsphere, https://doi.org/10.5194/egusphere-2025-1311, https://doi.org/10.5194/egusphere-2025-1311, 2025
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The Southeast Pacific plays a key role in transporting deep ocean water toward the Southern Ocean through a deep southward flow along the Chilean coast. This study explores its variations and links to El Niño–Southern Oscillation. We found that the deep flow strengthens during El Niño and weakens during La Niña. These changes are tied to large-scale ocean shifts and energy transfers from surface to deep waters. Smaller-scale ocean processes also influence the flow, especially near the coast.
Macarena Díaz-Astudillo, Manuel Castillo, Pedro A. Figueroa, Leonardo R. Castro, Ramiro Riquelme-Bugueño, Iván Pérez-Santos, Oscar Pizarro, and Gonzalo S. Saldías
EGUsphere, https://doi.org/10.5194/egusphere-2025-417, https://doi.org/10.5194/egusphere-2025-417, 2025
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Submarine canyons are known hotspots of marine productivity and biodiversity, but we don’t fully understand why. We studied a submarine canyon located in central Chile and found that it’s a highly dynamic environment in both space and time. We think that the alternating currents and the contrasting distribution of zooplankton within the canyon might interact to promote zooplankton retention. Our results help to explain why submarine canyons host such high zooplankton diversity and abundance.
Yan Barabinot, Sabrina Speich, Xavier Carton, Pierre L'Hégaret, Corentin Subirade, Rémi Laxenaire, and Johannes Karstensen
EGUsphere, https://doi.org/10.5194/egusphere-2025-586, https://doi.org/10.5194/egusphere-2025-586, 2025
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Mesoscale eddies are rotating oceanic currents key to ocean variability. Off Brazil’s northeast coast, the North Brazil Current generates in average 4.5 eddies per year, which drift towards the West Indies, transporting waters from the southern hemisphere. Using data collected at sea by the EUREC4A-OA cruise, this study reveals that deep eddies transport five times more water than surface ones, reshaping our understanding of the regional water transport.
Taavi Liblik, Daniel Rak, Enriko Siht, Germo Väli, Johannes Karstensen, Laura Tuomi, Louise C. Biddle, Madis-Jaak Lilover, Māris Skudra, Michael Naumann, Urmas Lips, and Volker Mohrholz
EGUsphere, https://doi.org/10.5194/egusphere-2024-2272, https://doi.org/10.5194/egusphere-2024-2272, 2024
Preprint archived
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Eight current meters were deployed to the seafloor across the Baltic to enhance knowledge about circulation and currents. The experiment was complemented by autonomous vehicles. Stable circulation patterns were observed at the sea when weather was steady. Strong and quite persistent currents were observed at the key passage for the deep-water renewal of the Northern Baltic Sea. Deep water renewal mostly occurs during spring and summer periods in the northern Baltic Sea.
Mathilde Dugenne, Marco Corrales-Ugalde, Jessica Y. Luo, Rainer Kiko, Todd D. O'Brien, Jean-Olivier Irisson, Fabien Lombard, Lars Stemmann, Charles Stock, Clarissa R. Anderson, Marcel Babin, Nagib Bhairy, Sophie Bonnet, Francois Carlotti, Astrid Cornils, E. Taylor Crockford, Patrick Daniel, Corinne Desnos, Laetitia Drago, Amanda Elineau, Alexis Fischer, Nina Grandrémy, Pierre-Luc Grondin, Lionel Guidi, Cecile Guieu, Helena Hauss, Kendra Hayashi, Jenny A. Huggett, Laetitia Jalabert, Lee Karp-Boss, Kasia M. Kenitz, Raphael M. Kudela, Magali Lescot, Claudie Marec, Andrew McDonnell, Zoe Mériguet, Barbara Niehoff, Margaux Noyon, Thelma Panaïotis, Emily Peacock, Marc Picheral, Emilie Riquier, Collin Roesler, Jean-Baptiste Romagnan, Heidi M. Sosik, Gretchen Spencer, Jan Taucher, Chloé Tilliette, and Marion Vilain
Earth Syst. Sci. Data, 16, 2971–2999, https://doi.org/10.5194/essd-16-2971-2024, https://doi.org/10.5194/essd-16-2971-2024, 2024
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Plankton and particles influence carbon cycling and energy flow in marine ecosystems. We used three types of novel plankton imaging systems to obtain size measurements from a range of plankton and particle sizes and across all major oceans. Data were compiled and cross-calibrated from many thousands of images, showing seasonal and spatial changes in particle size structure in different ocean basins. These datasets form the first release of the Pelagic Size Structure database (PSSdb).
Lenna Oriana Ortiz-Castillo, Oscar Pizarro, Marcela Cornejo-D'Ottone, and Boris Dewitte
EGUsphere, https://doi.org/10.5194/egusphere-2024-1290, https://doi.org/10.5194/egusphere-2024-1290, 2024
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Poleward undercurrent eddies (Puddies) transport a source water mass with low oxygen hundreds of kilometers away from the coast. A simulation based on a physical-biogeochemical model was used to characterize the biogeochemical average conditions inside the Puddies during their lifetime while modifying the conditions in the open sea. Our findings show that the biological activity extends the low oxygen core conditions counteracted by advection processes that tend to ventilate the core.
Pierre L'Hégaret, Florian Schütte, Sabrina Speich, Gilles Reverdin, Dariusz B. Baranowski, Rena Czeschel, Tim Fischer, Gregory R. Foltz, Karen J. Heywood, Gerd Krahmann, Rémi Laxenaire, Caroline Le Bihan, Philippe Le Bot, Stéphane Leizour, Callum Rollo, Michael Schlundt, Elizabeth Siddle, Corentin Subirade, Dongxiao Zhang, and Johannes Karstensen
Earth Syst. Sci. Data, 15, 1801–1830, https://doi.org/10.5194/essd-15-1801-2023, https://doi.org/10.5194/essd-15-1801-2023, 2023
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In early 2020, the EUREC4A-OA/ATOMIC experiment took place in the northwestern Tropical Atlantic Ocean, a dynamical region where different water masses interact. Four oceanographic vessels and a fleet of autonomous devices were deployed to study the processes at play and sample the upper ocean, each with its own observing capability. The article first describes the data calibration and validation and second their cross-validation, using a hierarchy of instruments and estimating the uncertainty.
Rainer Kiko, Marc Picheral, David Antoine, Marcel Babin, Léo Berline, Tristan Biard, Emmanuel Boss, Peter Brandt, Francois Carlotti, Svenja Christiansen, Laurent Coppola, Leandro de la Cruz, Emilie Diamond-Riquier, Xavier Durrieu de Madron, Amanda Elineau, Gabriel Gorsky, Lionel Guidi, Helena Hauss, Jean-Olivier Irisson, Lee Karp-Boss, Johannes Karstensen, Dong-gyun Kim, Rachel M. Lekanoff, Fabien Lombard, Rubens M. Lopes, Claudie Marec, Andrew M. P. McDonnell, Daniela Niemeyer, Margaux Noyon, Stephanie H. O'Daly, Mark D. Ohman, Jessica L. Pretty, Andreas Rogge, Sarah Searson, Masashi Shibata, Yuji Tanaka, Toste Tanhua, Jan Taucher, Emilia Trudnowska, Jessica S. Turner, Anya Waite, and Lars Stemmann
Earth Syst. Sci. Data, 14, 4315–4337, https://doi.org/10.5194/essd-14-4315-2022, https://doi.org/10.5194/essd-14-4315-2022, 2022
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The term
marine particlescomprises detrital aggregates; fecal pellets; bacterioplankton, phytoplankton and zooplankton; and even fish. Here, we present a global dataset that contains 8805 vertical particle size distribution profiles obtained with Underwater Vision Profiler 5 (UVP5) camera systems. These data are valuable to the scientific community, as they can be used to constrain important biogeochemical processes in the ocean, such as the flux of carbon to the deep sea.
Léa Olivier, Jacqueline Boutin, Gilles Reverdin, Nathalie Lefèvre, Peter Landschützer, Sabrina Speich, Johannes Karstensen, Matthieu Labaste, Christophe Noisel, Markus Ritschel, Tobias Steinhoff, and Rik Wanninkhof
Biogeosciences, 19, 2969–2988, https://doi.org/10.5194/bg-19-2969-2022, https://doi.org/10.5194/bg-19-2969-2022, 2022
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We investigate the impact of the interactions between eddies and the Amazon River plume on the CO2 air–sea fluxes to better characterize the ocean carbon sink in winter 2020. The region is a strong CO2 sink, previously underestimated by a factor of 10 due to a lack of data and understanding of the processes responsible for the variability in ocean carbon parameters. The CO2 absorption is mainly driven by freshwater from the Amazon entrained by eddies and by the winter seasonal cooling.
Jannes Koelling, Dariia Atamanchuk, Johannes Karstensen, Patricia Handmann, and Douglas W. R. Wallace
Biogeosciences, 19, 437–454, https://doi.org/10.5194/bg-19-437-2022, https://doi.org/10.5194/bg-19-437-2022, 2022
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In this study, we investigate oxygen variability in the deep western boundary current in the Labrador Sea from multiyear moored records. We estimate that about half of the oxygen taken up in the interior Labrador Sea by air–sea gas exchange during deep water formation is exported southward the same year. Our results underline the complexity of the oxygen uptake and export in the Labrador Sea and highlight the important role this region plays in supplying oxygen to the deep ocean.
Gerhard Fischer, Oscar E. Romero, Johannes Karstensen, Karl-Heinz Baumann, Nasrollah Moradi, Morten Iversen, Götz Ruhland, Marco Klann, and Arne Körtzinger
Biogeosciences, 18, 6479–6500, https://doi.org/10.5194/bg-18-6479-2021, https://doi.org/10.5194/bg-18-6479-2021, 2021
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Low-oxygen eddies in the eastern subtropical North Atlantic can form an oasis for phytoplankton growth. Here we report on particle flux dynamics at the oligotrophic Cape Verde Ocean Observatory. We observed consistent flux patterns during the passages of low-oxygen eddies. We found distinct flux peaks in late winter, clearly exceeding background fluxes. Our findings suggest that the low-oxygen eddies sequester higher organic carbon than expected for oligotrophic settings.
Bjorn Stevens, Sandrine Bony, David Farrell, Felix Ament, Alan Blyth, Christopher Fairall, Johannes Karstensen, Patricia K. Quinn, Sabrina Speich, Claudia Acquistapace, Franziska Aemisegger, Anna Lea Albright, Hugo Bellenger, Eberhard Bodenschatz, Kathy-Ann Caesar, Rebecca Chewitt-Lucas, Gijs de Boer, Julien Delanoë, Leif Denby, Florian Ewald, Benjamin Fildier, Marvin Forde, Geet George, Silke Gross, Martin Hagen, Andrea Hausold, Karen J. Heywood, Lutz Hirsch, Marek Jacob, Friedhelm Jansen, Stefan Kinne, Daniel Klocke, Tobias Kölling, Heike Konow, Marie Lothon, Wiebke Mohr, Ann Kristin Naumann, Louise Nuijens, Léa Olivier, Robert Pincus, Mira Pöhlker, Gilles Reverdin, Gregory Roberts, Sabrina Schnitt, Hauke Schulz, A. Pier Siebesma, Claudia Christine Stephan, Peter Sullivan, Ludovic Touzé-Peiffer, Jessica Vial, Raphaela Vogel, Paquita Zuidema, Nicola Alexander, Lyndon Alves, Sophian Arixi, Hamish Asmath, Gholamhossein Bagheri, Katharina Baier, Adriana Bailey, Dariusz Baranowski, Alexandre Baron, Sébastien Barrau, Paul A. Barrett, Frédéric Batier, Andreas Behrendt, Arne Bendinger, Florent Beucher, Sebastien Bigorre, Edmund Blades, Peter Blossey, Olivier Bock, Steven Böing, Pierre Bosser, Denis Bourras, Pascale Bouruet-Aubertot, Keith Bower, Pierre Branellec, Hubert Branger, Michal Brennek, Alan Brewer, Pierre-Etienne Brilouet, Björn Brügmann, Stefan A. Buehler, Elmo Burke, Ralph Burton, Radiance Calmer, Jean-Christophe Canonici, Xavier Carton, Gregory Cato Jr., Jude Andre Charles, Patrick Chazette, Yanxu Chen, Michal T. Chilinski, Thomas Choularton, Patrick Chuang, Shamal Clarke, Hugh Coe, Céline Cornet, Pierre Coutris, Fleur Couvreux, Susanne Crewell, Timothy Cronin, Zhiqiang Cui, Yannis Cuypers, Alton Daley, Gillian M. Damerell, Thibaut Dauhut, Hartwig Deneke, Jean-Philippe Desbios, Steffen Dörner, Sebastian Donner, Vincent Douet, Kyla Drushka, Marina Dütsch, André Ehrlich, Kerry Emanuel, Alexandros Emmanouilidis, Jean-Claude Etienne, Sheryl Etienne-Leblanc, Ghislain Faure, Graham Feingold, Luca Ferrero, Andreas Fix, Cyrille Flamant, Piotr Jacek Flatau, Gregory R. Foltz, Linda Forster, Iulian Furtuna, Alan Gadian, Joseph Galewsky, Martin Gallagher, Peter Gallimore, Cassandra Gaston, Chelle Gentemann, Nicolas Geyskens, Andreas Giez, John Gollop, Isabelle Gouirand, Christophe Gourbeyre, Dörte de Graaf, Geiske E. de Groot, Robert Grosz, Johannes Güttler, Manuel Gutleben, Kashawn Hall, George Harris, Kevin C. Helfer, Dean Henze, Calvert Herbert, Bruna Holanda, Antonio Ibanez-Landeta, Janet Intrieri, Suneil Iyer, Fabrice Julien, Heike Kalesse, Jan Kazil, Alexander Kellman, Abiel T. Kidane, Ulrike Kirchner, Marcus Klingebiel, Mareike Körner, Leslie Ann Kremper, Jan Kretzschmar, Ovid Krüger, Wojciech Kumala, Armin Kurz, Pierre L'Hégaret, Matthieu Labaste, Tom Lachlan-Cope, Arlene Laing, Peter Landschützer, Theresa Lang, Diego Lange, Ingo Lange, Clément Laplace, Gauke Lavik, Rémi Laxenaire, Caroline Le Bihan, Mason Leandro, Nathalie Lefevre, Marius Lena, Donald Lenschow, Qiang Li, Gary Lloyd, Sebastian Los, Niccolò Losi, Oscar Lovell, Christopher Luneau, Przemyslaw Makuch, Szymon Malinowski, Gaston Manta, Eleni Marinou, Nicholas Marsden, Sebastien Masson, Nicolas Maury, Bernhard Mayer, Margarette Mayers-Als, Christophe Mazel, Wayne McGeary, James C. McWilliams, Mario Mech, Melina Mehlmann, Agostino Niyonkuru Meroni, Theresa Mieslinger, Andreas Minikin, Peter Minnett, Gregor Möller, Yanmichel Morfa Avalos, Caroline Muller, Ionela Musat, Anna Napoli, Almuth Neuberger, Christophe Noisel, David Noone, Freja Nordsiek, Jakub L. Nowak, Lothar Oswald, Douglas J. Parker, Carolyn Peck, Renaud Person, Miriam Philippi, Albert Plueddemann, Christopher Pöhlker, Veronika Pörtge, Ulrich Pöschl, Lawrence Pologne, Michał Posyniak, Marc Prange, Estefanía Quiñones Meléndez, Jule Radtke, Karim Ramage, Jens Reimann, Lionel Renault, Klaus Reus, Ashford Reyes, Joachim Ribbe, Maximilian Ringel, Markus Ritschel, Cesar B. Rocha, Nicolas Rochetin, Johannes Röttenbacher, Callum Rollo, Haley Royer, Pauline Sadoulet, Leo Saffin, Sanola Sandiford, Irina Sandu, Michael Schäfer, Vera Schemann, Imke Schirmacher, Oliver Schlenczek, Jerome Schmidt, Marcel Schröder, Alfons Schwarzenboeck, Andrea Sealy, Christoph J. Senff, Ilya Serikov, Samkeyat Shohan, Elizabeth Siddle, Alexander Smirnov, Florian Späth, Branden Spooner, M. Katharina Stolla, Wojciech Szkółka, Simon P. de Szoeke, Stéphane Tarot, Eleni Tetoni, Elizabeth Thompson, Jim Thomson, Lorenzo Tomassini, Julien Totems, Alma Anna Ubele, Leonie Villiger, Jan von Arx, Thomas Wagner, Andi Walther, Ben Webber, Manfred Wendisch, Shanice Whitehall, Anton Wiltshire, Allison A. Wing, Martin Wirth, Jonathan Wiskandt, Kevin Wolf, Ludwig Worbes, Ethan Wright, Volker Wulfmeyer, Shanea Young, Chidong Zhang, Dongxiao Zhang, Florian Ziemen, Tobias Zinner, and Martin Zöger
Earth Syst. Sci. Data, 13, 4067–4119, https://doi.org/10.5194/essd-13-4067-2021, https://doi.org/10.5194/essd-13-4067-2021, 2021
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The EUREC4A field campaign, designed to test hypothesized mechanisms by which clouds respond to warming and benchmark next-generation Earth-system models, is presented. EUREC4A comprised roughly 5 weeks of measurements in the downstream winter trades of the North Atlantic – eastward and southeastward of Barbados. It was the first campaign that attempted to characterize the full range of processes and scales influencing trade wind clouds.
Samuel T. Wilson, Alia N. Al-Haj, Annie Bourbonnais, Claudia Frey, Robinson W. Fulweiler, John D. Kessler, Hannah K. Marchant, Jana Milucka, Nicholas E. Ray, Parvadha Suntharalingam, Brett F. Thornton, Robert C. Upstill-Goddard, Thomas S. Weber, Damian L. Arévalo-Martínez, Hermann W. Bange, Heather M. Benway, Daniele Bianchi, Alberto V. Borges, Bonnie X. Chang, Patrick M. Crill, Daniela A. del Valle, Laura Farías, Samantha B. Joye, Annette Kock, Jabrane Labidi, Cara C. Manning, John W. Pohlman, Gregor Rehder, Katy J. Sparrow, Philippe D. Tortell, Tina Treude, David L. Valentine, Bess B. Ward, Simon Yang, and Leonid N. Yurganov
Biogeosciences, 17, 5809–5828, https://doi.org/10.5194/bg-17-5809-2020, https://doi.org/10.5194/bg-17-5809-2020, 2020
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The oceans are a net source of the major greenhouse gases; however there has been little coordination of oceanic methane and nitrous oxide measurements. The scientific community has recently embarked on a series of capacity-building exercises to improve the interoperability of dissolved methane and nitrous oxide measurements. This paper derives from a workshop which discussed the challenges and opportunities for oceanic methane and nitrous oxide research in the near future.
Soeren Thomsen, Johannes Karstensen, Rainer Kiko, Gerd Krahmann, Marcus Dengler, and Anja Engel
Biogeosciences, 16, 979–998, https://doi.org/10.5194/bg-16-979-2019, https://doi.org/10.5194/bg-16-979-2019, 2019
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Physical and biogeochemical observations from an autonomous underwater vehicle in combination with ship-based measurements are used to investigate remote and local drivers of the oxygen and nutrient variability off Mauritania. Beside the transport of oxygen and nutrients characteristics from remote areas towards Mauritania also local remineralization of organic material close to the seabed seems to be important for the distribution of oxygen and nutrients.
Mochamad Furqon Azis Ismail, Joachim Ribbe, Johannes Karstensen, and Vincent Rossi
Ocean Sci. Discuss., https://doi.org/10.5194/os-2018-142, https://doi.org/10.5194/os-2018-142, 2019
Publication in OS not foreseen
Jürgen Fischer, Johannes Karstensen, Marilena Oltmanns, and Sunke Schmidtko
Ocean Sci., 14, 1167–1183, https://doi.org/10.5194/os-14-1167-2018, https://doi.org/10.5194/os-14-1167-2018, 2018
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Based on nearly 17 years of profiling (Argo) float data, high-resolution (~ 25 km grid) maps of mean flow and eddy kinetic energy (EKE) were constructed for the intermediate to deep subpolar North Atlantic. Robust boundary currents along topographic slopes, mid-basin advective pathways, and stagnation regimes were identified. The ratio of mean flow vs. the square root of EKE indicates regions dominated by advection, and large regions in which eddy diffusion prevails.
Yao Fu, Johannes Karstensen, and Peter Brandt
Ocean Sci., 14, 589–616, https://doi.org/10.5194/os-14-589-2018, https://doi.org/10.5194/os-14-589-2018, 2018
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Hydrographic analysis in the Atlantic along 14.5° N and 24.5° N shows that between the periods of 1989/92 and 2013/15, the Antarctic Intermediate Water became warmer and saltier at 14.5° N, and that the Antarctic Bottom Water became lighter at both latitudes. By applying a box inverse model, the Atlantic Meridional Overturning Circulation (AMOC) was determined. Comparison among the inverse solution, GECCO2, RAPID, and MOVE shows that the AMOC has not significantly changed in the past 20 years.
Yao Fu, Johannes Karstensen, and Peter Brandt
Ocean Sci., 13, 531–549, https://doi.org/10.5194/os-13-531-2017, https://doi.org/10.5194/os-13-531-2017, 2017
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Meridional Ekman transport in the tropical Atlantic was estimated directly by using observed ageostrophic velocity, and indirectly by using wind stress data. The direct and indirect methods agree well with each other. The top of the pycnocline represents the Ekman depth better than the mixed layer depth and a constant depth. The Ekman heat and salt fluxes calculated from sea surface temperature and salinity or from high-resolution temperature and salinity profile data differ only marginally.
Johannes Karstensen, Florian Schütte, Alice Pietri, Gerd Krahmann, Björn Fiedler, Damian Grundle, Helena Hauss, Arne Körtzinger, Carolin R. Löscher, Pierre Testor, Nuno Vieira, and Martin Visbeck
Biogeosciences, 14, 2167–2181, https://doi.org/10.5194/bg-14-2167-2017, https://doi.org/10.5194/bg-14-2167-2017, 2017
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High-resolution observational data from underwater gliders and ships are used to investigate drivers and pathways of nutrient upwelling in high-productive whirling ecosystems (eddies). The data suggest that the upwelling is created by the interaction of wind-induced internal waves with the local rotation of the eddy. Because of differences in nutrient and oxygen pathways, a low-oxygen core is established at shallow depth in the high-productive eddies.
Manuel I. Castillo, Oscar Pizarro, Nadin Ramírez, and Mario Cáceres
Ocean Sci., 13, 145–160, https://doi.org/10.5194/os-13-145-2017, https://doi.org/10.5194/os-13-145-2017, 2017
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Here we present the results of an intensive physical oceanography study conducted in the Reloncavi fjord (41.5º S, 72.5º W) which was focused on the sub-inertial timescale. The along-fjord currents presented 3-day oscillations which were consistent with the natural internal period of oscillation of the fjord basin (internal seiche). This oscillation could explain more than 44 % of the 3-day variability and contributed with kinetic energy levels as large as the tidal currents.
Florian Schütte, Johannes Karstensen, Gerd Krahmann, Helena Hauss, Björn Fiedler, Peter Brandt, Martin Visbeck, and Arne Körtzinger
Biogeosciences, 13, 5865–5881, https://doi.org/10.5194/bg-13-5865-2016, https://doi.org/10.5194/bg-13-5865-2016, 2016
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Mesoscale eddies with very low–oxygen concentrations at shallow depth have been recently discovered in the eastern tropical North Atlantic. Our analysis shows that low oxygen eddies occur more frequent than expected and are found even close to the equator (8° N). From budget calculations we show that an oxygen reduction of 7 µmol/kg in the depth range of 50–150 m in the eastern tropical North Atlantic (peak reduction is 16 µmol/kg at 100 m depth) can be associated with the dispersion of these eddies.
Björn Fiedler, Damian S. Grundle, Florian Schütte, Johannes Karstensen, Carolin R. Löscher, Helena Hauss, Hannes Wagner, Alexandra Loginova, Rainer Kiko, Péricles Silva, Toste Tanhua, and Arne Körtzinger
Biogeosciences, 13, 5633–5647, https://doi.org/10.5194/bg-13-5633-2016, https://doi.org/10.5194/bg-13-5633-2016, 2016
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Oxygen-depleted mesoscale features in the open eastern tropical North Atlantic, which are formed in the Mauritanian upwelling region, were discovered recently. This study examines biogeochemical structure and magnitudes of related processes within these isolated water masses. We found very low oxygen concentrations and strongly enhanced acidity at near-surface depth. Oxygen utilization and downward carbon export were found to exceed known values for this ocean region.
Luis Bravo, Marcel Ramos, Orlando Astudillo, Boris Dewitte, and Katerina Goubanova
Ocean Sci., 12, 1049–1065, https://doi.org/10.5194/os-12-1049-2016, https://doi.org/10.5194/os-12-1049-2016, 2016
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We evaluated the seasonal variability in Ekman transport, pumping and their relative contribution to total upwelling along the central-northern Chile region (~30ºS) from a high-resolution atmospheric model simulation. The results showed that the relative contribution of Ekman transport and pumping to the vertical transport along the coast, considering the estimated wind drop-off length, indicated meridional alternation between both mechanisms, modulated by orography and the intricate coastline.
Oscar Vergara, Boris Dewitte, Ivonne Montes, Veronique Garçon, Marcel Ramos, Aurélien Paulmier, and Oscar Pizarro
Biogeosciences, 13, 4389–4410, https://doi.org/10.5194/bg-13-4389-2016, https://doi.org/10.5194/bg-13-4389-2016, 2016
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The Southeast Pacific hosts one of the most extensive oxygen minimum zone (OMZ), yet the dynamics behind it remain unveiled. We use a high-resolution coupled physical–biogeochemical model to document the seasonal cycle of dissolved oxygen within the OMZ in both the coastal zone and the offshore ocean. The OMZ seasonal variability is driven by the seasonal fluctuations of the dissolved oxygen eddy flux, with a peak in Austral winter (fall) at the northern (southern) boundary and near the coast.
Gerhard Fischer, Johannes Karstensen, Oscar Romero, Karl-Heinz Baumann, Barbara Donner, Jens Hefter, Gesine Mollenhauer, Morten Iversen, Björn Fiedler, Ivanice Monteiro, and Arne Körtzinger
Biogeosciences, 13, 3203–3223, https://doi.org/10.5194/bg-13-3203-2016, https://doi.org/10.5194/bg-13-3203-2016, 2016
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Particle fluxes at the Cape Verde Ocean Observatory in the eastern tropical North Atlantic for the period December 2009 until May 2011 are discussed based on deep sediment trap time-series data collected at 1290 and 3439 m water depths. The typically open-ocean flux pattern with weak seasonality is modified by the appearance of a highly productive and low oxygen eddy in winter 2010. The eddy passage was accompanied by high biogenic and lithogenic fluxes, lasting from December 2009 to May 2010.
Florian Schütte, Peter Brandt, and Johannes Karstensen
Ocean Sci., 12, 663–685, https://doi.org/10.5194/os-12-663-2016, https://doi.org/10.5194/os-12-663-2016, 2016
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We want to examine the characteristics of mesoscale eddies in the tropical northeastern Atlantic. They serve as transport agents, exporting water from the coast into the open ocean. Traditionally eddies are categorized with respect to their rotation: cyclonic and anticyclonic. But we could identify, with a combination of different satellite products, a third type called "anticyclonic mode-water eddy" transporting much larger anomalies. We propose a distinction into three classes for further studies.
Manuel I. Castillo, Ursula Cifuentes, Oscar Pizarro, Leif Djurfeldt, and Mario Caceres
Ocean Sci., 12, 533–544, https://doi.org/10.5194/os-12-533-2016, https://doi.org/10.5194/os-12-533-2016, 2016
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The upper layer of the Reloncaví fjord, Chile, shows a continuous stratification year-round. Nevertheless, the vertical salt flux seems to be balanced by the horizontal salt flux, which maintains the amount of salt into the fjord nearly as a steady state. The upper layer shows a flushing time of about 3 days.
Helena Hauss, Svenja Christiansen, Florian Schütte, Rainer Kiko, Miryam Edvam Lima, Elizandro Rodrigues, Johannes Karstensen, Carolin R. Löscher, Arne Körtzinger, and Björn Fiedler
Biogeosciences, 13, 1977–1989, https://doi.org/10.5194/bg-13-1977-2016, https://doi.org/10.5194/bg-13-1977-2016, 2016
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In a low-oxygen eddy in the tropical Atlantic, total zooplankton biomass was increased. Larger plankton avoided the oxygen minimum zone (OMZ, < 20 µmol O2 kg−1). We identified four strategies by different plankton groups: (i) shallow OMZ avoidance and compression at surface, (ii) migration to shallow OMZ core during daytime, migration to surface at nighttime, (iii) residing in shallow OMZ day and night and (iv) migration through the shallow OMZ from oxygenated depths to surface and back.
C. R. Löscher, M. A. Fischer, S. C. Neulinger, B. Fiedler, M. Philippi, F. Schütte, A. Singh, H. Hauss, J. Karstensen, A. Körtzinger, S. Künzel, and R. A. Schmitz
Biogeosciences, 12, 7467–7482, https://doi.org/10.5194/bg-12-7467-2015, https://doi.org/10.5194/bg-12-7467-2015, 2015
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The waters of the tropical Atlantic Open Ocean usually contain comparably high concentrations of oxygen. Now, it became clear that there are watermasses related to eddies that are nearly anoxic. We surveyed one of those eddies and found a biosphere that largely differed from the usual biosphere present in this area with a specific community responsible for primary production and for degradation processes. Further, we found the very first indication for active nitrogen loss in the open Atlantic.
J. Karstensen, B. Fiedler, F. Schütte, P. Brandt, A. Körtzinger, G. Fischer, R. Zantopp, J. Hahn, M. Visbeck, and D. Wallace
Biogeosciences, 12, 2597–2605, https://doi.org/10.5194/bg-12-2597-2015, https://doi.org/10.5194/bg-12-2597-2015, 2015
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This study is the first report of the formation of dead zones in the open ocean. A combination of multiple ocean observing system elements (mooring, floats, satellites, ships) allowed us to reconstruct the generation of the dead zones and to connect the formation to enhanced respiration within mesoscale ocean eddies. The dead zones present specific threats to the ecosystem, such as the interruption of the diurnal migration of zooplankters.
L. Farías, L. Florez-Leiva, V. Besoain, G. Sarthou, and C. Fernández
Biogeosciences, 12, 1925–1940, https://doi.org/10.5194/bg-12-1925-2015, https://doi.org/10.5194/bg-12-1925-2015, 2015
P. Brandt, H. W. Bange, D. Banyte, M. Dengler, S.-H. Didwischus, T. Fischer, R. J. Greatbatch, J. Hahn, T. Kanzow, J. Karstensen, A. Körtzinger, G. Krahmann, S. Schmidtko, L. Stramma, T. Tanhua, and M. Visbeck
Biogeosciences, 12, 489–512, https://doi.org/10.5194/bg-12-489-2015, https://doi.org/10.5194/bg-12-489-2015, 2015
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Our observational study looks at the structure of the eastern tropical North Atlantic (ETNA) oxygen minimum zone (OMZ) in comparison with the less-ventilated, eastern tropical South Pacific OMZ. We quantify the OMZ’s oxygen budget composed of consumption, advection, lateral and vertical mixing. Substantial oxygen variability is observed on interannual to multidecadal timescales. The deoxygenation of the ETNA OMZ during the last decades represents a substantial imbalance of the oxygen budget.
M. L. González, V. Molina, L. Florez-Leiva, L. Oriol, A. J. Cavagna, F. Dehairs, L. Farias, and C. Fernandez
Biogeosciences Discuss., https://doi.org/10.5194/bgd-11-17151-2014, https://doi.org/10.5194/bgd-11-17151-2014, 2014
Revised manuscript not accepted
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This study shows for first time N2 fixation is occurring in the HNLC area of Southern Ocean and in naturally iron-fertilized waters, at rates exceeding previous reports for high latitudes (up to 20.11 nmol N L-1 d-1). Diazotrophs were identified as heterotrophic bacterioplankton; with an indirect role of dFe in the regulation of this process. Fertilization enhancing regenerated primary production may control N2 fixation via the availability od DOM for heterotrophic bacterioplankton.
J. Karstensen, T. Liblik, J. Fischer, K. Bumke, and G. Krahmann
Biogeosciences, 11, 3603–3617, https://doi.org/10.5194/bg-11-3603-2014, https://doi.org/10.5194/bg-11-3603-2014, 2014
P. J. Llanillo, J. Karstensen, J. L. Pelegrí, and L. Stramma
Biogeosciences, 10, 6339–6355, https://doi.org/10.5194/bg-10-6339-2013, https://doi.org/10.5194/bg-10-6339-2013, 2013
Related subject area
Biogeochemistry: Open Ocean
An upper-mesopelagic-zone carbon budget for the subarctic North Pacific
Ocean alkalinity enhancement in an open-ocean ecosystem: biogeochemical responses and carbon storage durability
Relationships between the concentration of particulate organic nitrogen and the inherent optical properties of seawater in oceanic surface waters
Inadequacies in the representation of sub-seasonal phytoplankton dynamics in Earth system models
Nitrogen dynamics and nitrate stable isotopes indicate nitrogen loss in the Bay of Bengal
Composite model-based estimate of the ocean carbon sink from 1959 to 2022
Phytoplankton community structure in relation to iron and macronutrient fluxes from subsurface waters in the western North Pacific during summer
Intense and localized export of selected marine snow types at eddy edges in the South Atlantic Ocean
Spatial distributions of iron and manganese in surface waters of the Arctic's Laptev and East Siberian seas
Climate-driven shifts in Southern Ocean primary producers and biogeochemistry in CMIP6 models
Oceanic enrichment of ammonium and its impacts on phytoplankton community composition under a high-emissions scenario
Ocean acidification trends and carbonate system dynamics across the North Atlantic subpolar gyre water masses during 2009–2019
Pelagic coccolithophore production and dissolution and their impacts on particulate inorganic carbon cycling in the western North Pacific
Marine snow morphology drives sinking and attenuation in the ocean interior
From small scale variability to mesoscale stability in surface ocean pH: implications for air-sea CO2 equilibration
Sedimentary organic matter signature hints at the phytoplankton-driven biological carbon pump in the central Arabian Sea
Hydrological cycle amplification imposes spatial patterns on the climate change response of ocean pH and carbonate chemistry
Assessing the tropical Atlantic biogeochemical processes in the Norwegian Earth System Model
Evolution of oxygen and stratification and their relationship in the North Pacific Ocean in CMIP6 Earth system models
Evaluation of CMIP6 model performance in simulating historical biogeochemistry across the southern South China Sea
Drivers of decadal trends in the ocean carbon sink in the past, present, and future in Earth system models
Anthropogenic carbon storage and its decadal changes in the Atlantic between 1990–2020
Ocean alkalinity enhancement impacts: regrowth of marine microalgae in alkaline mineral concentrations simulating the initial concentrations after ship-based dispersions
Climatic controls on metabolic constraints in the ocean
Effects of grain size and seawater salinity on magnesium hydroxide dissolution and secondary calcium carbonate precipitation kinetics: implications for ocean alkalinity enhancement
Short-term response of Emiliania huxleyi growth and morphology to abrupt salinity stress
Assessing the impact of CO2-equilibrated ocean alkalinity enhancement on microbial metabolic rates in an oligotrophic system
A time series analysis of transparent exopolymer particle distributions and C:N stoichiometry in the subtropical North Pacific: a key process in net community production and preformed nitrate anomalies?
Phosphomonoesterase and phosphodiesterase activities in the eastern Mediterranean in two contrasting seasonal situations
Net primary production annual maxima in the North Atlantic projected to shift in the 21st century
Testing the influence of light on nitrite cycling in the eastern tropical North Pacific
Loss of nitrogen via anaerobic ammonium oxidation (anammox) in the California Current system during the late Quaternary
Technical note: Assessment of float pH data quality control methods – a case study in the subpolar northwest Atlantic Ocean
Linking northeastern North Pacific oxygen changes to upstream surface outcrop variations
Underestimation of multi-decadal global O2 loss due to an optimal interpolation method
Reviews and syntheses: expanding the global coverage of gross primary production and net community production measurements using Biogeochemical-Argo floats
Characteristics of surface physical and biogeochemical parameters within mesoscale eddies in the Southern Ocean
Seasonal dynamics and annual budget of dissolved inorganic carbon in the northwestern Mediterranean deep-convection region
The fingerprint of climate variability on the surface ocean cycling of iron and its isotopes
Reconstructing the ocean's mesopelagic zone carbon budget: sensitivity and estimation of parameters associated with prokaryotic remineralization
Seasonal cycles of biogeochemical fluxes in the Scotia Sea, Southern Ocean: a stable isotope approach
Absence of photophysiological response to iron addition in autumn phytoplankton in the Antarctic sea-ice zone
Optimal parameters for the ocean's nutrient, carbon, and oxygen cycles compensate for circulation biases but replumb the biological pump
Importance of multiple sources of iron for the upper-ocean biogeochemistry over the northern Indian Ocean
Exploring the role of different data types and timescales in the quality of marine biogeochemical model calibration
All about nitrite: exploring nitrite sources and sinks in the eastern tropical North Pacific oxygen minimum zone
Fossil coccolith morphological attributes as a new proxy for deep ocean carbonate chemistry
Reconstructing ocean carbon storage with CMIP6 Earth system models and synthetic Argo observations
Using machine learning and Biogeochemical-Argo (BGC-Argo) floats to assess biogeochemical models and optimize observing system design
The representation of alkalinity and the carbonate pump from CMIP5 to CMIP6 Earth system models and implications for the carbon cycle
Brandon M. Stephens, Montserrat Roca-Martí, Amy E. Maas, Vinícius J. Amaral, Samantha Clevenger, Shawnee Traylor, Claudia R. Benitez-Nelson, Philip W. Boyd, Ken O. Buesseler, Craig A. Carlson, Nicolas Cassar, Margaret Estapa, Andrea J. Fassbender, Yibin Huang, Phoebe J. Lam, Olivier Marchal, Susanne Menden-Deuer, Nicola L. Paul, Alyson E. Santoro, David A. Siegel, and David P. Nicholson
Biogeosciences, 22, 3301–3328, https://doi.org/10.5194/bg-22-3301-2025, https://doi.org/10.5194/bg-22-3301-2025, 2025
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The ocean’s mesopelagic zone (MZ) plays a crucial role in the global carbon cycle. This study combines new and previously published measurements of organic carbon supply and demand collected in August 2018 in the MZ of the subarctic North Pacific Ocean. Supply was insufficient to meet demand in August, but supply entering into the MZ in the spring of 2018 could have met the August demand. Results suggest observations over seasonal timescales may help to close MZ carbon budgets.
Allanah Joy Paul, Mathias Haunost, Silvan Urs Goldenberg, Jens Hartmann, Nicolás Sánchez, Julieta Schneider, Niels Suitner, and Ulf Riebesell
Biogeosciences, 22, 2749–2766, https://doi.org/10.5194/bg-22-2749-2025, https://doi.org/10.5194/bg-22-2749-2025, 2025
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Ocean alkalinity enhancement (OAE) is being assessed for its potential to absorb atmospheric CO2 and store it for a long time. OAE still needs comprehensive assessment of its safety and effectiveness. We studied an idealised OAE application in a natural low-nutrient ecosystem over 1 month. Our results showed that biogeochemical functioning remained mostly stable but that the long-term capability for storing carbon may be limited at high alkalinity concentration.
Alain Fumenia, Hubert Loisel, Rick A. Reynolds, and Dariusz Stramski
Biogeosciences, 22, 2461–2484, https://doi.org/10.5194/bg-22-2461-2025, https://doi.org/10.5194/bg-22-2461-2025, 2025
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Particulate organic nitrogen (PON) plays a central role in ocean biogeochemistry, yet limited in situ data hinder a full understanding of PON variability and associated processes. Measurements of optical properties offer an alternative for assessing PON across diverse marine environments. Our analysis reveals strong relationships between PON and optical properties, supporting a promising means to assess PON from optical measurements performed in situ or conducted from remote-sensing platforms.
Madhavan Girijakumari Keerthi, Olivier Aumont, Lester Kwiatkowski, and Marina Levy
Biogeosciences, 22, 2163–2180, https://doi.org/10.5194/bg-22-2163-2025, https://doi.org/10.5194/bg-22-2163-2025, 2025
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We assessed how well climate models replicate sub-seasonal changes in ocean chlorophyll observed by satellites. Models struggle to capture these variations accurately. Some overestimate fluctuations and their impact on annual chlorophyll variability, while others underestimate them. The underestimation is likely due to limited model resolution, while the overestimation may come from internal model oscillations.
Gesa Schulz, Kirstin Dähnke, Tina Sanders, Jan Penopp, Hermann W. Bange, Rena Czeschel, and Birgit Gaye
EGUsphere, https://doi.org/10.5194/egusphere-2025-1660, https://doi.org/10.5194/egusphere-2025-1660, 2025
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Oxygen minimum zones (OMZs) are low-oxygen ocean areas that deplete nitrogen, a key marine nutrient. Understanding nitrogen cycling in OMZs is crucial for the global nitrogen cycle. This study examined nitrogen cycling in the OMZ of the Bay of Bengal and East Equatorial Indian Ocean, revealing limited mixing between both regions. Surface phytoplankton consumes nitrate, while deeper nitrification recycles nitrogen. In the BoB’s OMZ (100–300 m), nitrogen loss likely occurs via anammox.
Jens Terhaar
Biogeosciences, 22, 1631–1649, https://doi.org/10.5194/bg-22-1631-2025, https://doi.org/10.5194/bg-22-1631-2025, 2025
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The ocean is a major natural carbon sink. Despite its importance, estimates of the ocean carbon sink remain uncertain. Here, I present a hybrid model estimate of the ocean carbon sink from 1959 to 2022. By combining ocean models in hindcast mode and Earth system models, I keep the strength of each approach and remove the respective weaknesses. This composite model estimate is similar in magnitude to the best estimate of the Global Carbon Budget but 70 % less uncertain.
Huailin Deng, Koji Suzuki, Ichiro Yasuda, Hiroshi Ogawa, and Jun Nishioka
Biogeosciences, 22, 1495–1508, https://doi.org/10.5194/bg-22-1495-2025, https://doi.org/10.5194/bg-22-1495-2025, 2025
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Iron (Fe) and nitrate are vital for primary production in the North Pacific. Sedimentary Fe is carried by North Pacific Intermediate Water to the North Pacific, but the nutrient return path and its effect on phytoplankton are unclear. By combining Fe and macronutrient fluxes with phytoplankton composition, this study firstly revealed that Fe supply from the subsurface greatly controls diatom abundance and identified the nutrient return path in the subarctic gyre and Kuroshio–Oyashio transition area.
Alexandre Accardo, Rémi Laxenaire, Alberto Baudena, Sabrina Speich, Rainer Kiko, and Lars Stemmann
Biogeosciences, 22, 1183–1201, https://doi.org/10.5194/bg-22-1183-2025, https://doi.org/10.5194/bg-22-1183-2025, 2025
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The open ocean helps mitigate climate change by storing CO2 via the biological carbon pump (BCP), which involves processes like organic carbon production at the surface and transferring it to the deep ocean via various pathways. By deploying an autonomous platform, we found significant marine snow accumulation from the surface to the mesopelagic zone in frontal regions between eddies. We suggest that the coupling of hydrodynamics at eddy edges and biological activity may enhance this process.
Naoya Kanna, Kazutaka Tateyama, Takuji Waseda, Anna Timofeeva, Maria Papadimitraki, Laura Whitmore, Hajime Obata, Daiki Nomura, Hiroshi Ogawa, Youhei Yamashita, and Igor Polyakov
Biogeosciences, 22, 1057–1076, https://doi.org/10.5194/bg-22-1057-2025, https://doi.org/10.5194/bg-22-1057-2025, 2025
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This article presents data on iron and manganese, essential micronutrients for primary producers in the Arctic Laptev and East Siberian seas (LESS). There, observations were made through international cooperation with the Nansen and Amundsen Basin Observational System expedition during the late summer of 2021. The results from this study indicate that the major sources controlling the iron and manganese distributions on the LESS continental margins are river discharge and shelf sediment input.
Ben J. Fisher, Alex J. Poulton, Michael P. Meredith, Kimberlee Baldry, Oscar Schofield, and Sian F. Henley
Biogeosciences, 22, 975–994, https://doi.org/10.5194/bg-22-975-2025, https://doi.org/10.5194/bg-22-975-2025, 2025
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The Southern Ocean is a rapidly warming environment, with subsequent impacts on ecosystems and biogeochemical cycling. This study examines changes in phytoplankton and biogeochemistry using a range of climate models. Under climate change, the Southern Ocean will be warmer, more acidic and more productive and will have reduced nutrient availability by 2100. However, there is substantial variability between models across key productivity parameters. We propose ways of reducing this uncertainty.
Pearse J. Buchanan, Juan J. Pierella Karlusich, Robyn E. Tuerena, Roxana Shafiee, E. Malcolm S. Woodward, Chris Bowler, and Alessandro Tagliabue
EGUsphere, https://doi.org/10.5194/egusphere-2024-3639, https://doi.org/10.5194/egusphere-2024-3639, 2025
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Ammonium is a form of nitrogen that may become more important for growth of marine primary producers (i.e., phytoplankton) in the future. Because some phytoplankton taxa have a greater affinity for ammonium than others, the relative increase in ammonium could cause shifts in community composition. We quantify ammonium enrichment, identify its drivers, and isolate the possible effect on phytoplankton community composition under a high emissions scenario.
David Curbelo-Hernández, Fiz F. Pérez, Melchor González-Dávila, Sergey V. Gladyshev, Aridane G. González, David González-Santana, Antón Velo, Alexey Sokov, and J. Magdalena Santana-Casiano
Biogeosciences, 21, 5561–5589, https://doi.org/10.5194/bg-21-5561-2024, https://doi.org/10.5194/bg-21-5561-2024, 2024
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The study evaluated CO2–carbonate system dynamics in the North Atlantic subpolar gyre during 2009–2019. Significant ocean acidification, largely due to rising anthropogenic CO2 levels, was found. Cooling, freshening, and enhanced convective processes intensified this trend, affecting calcite and aragonite saturation. The findings contribute to a deeper understanding of ocean acidification and improve our knowledge about its impact on marine ecosystems.
Yuye Han, Zvi Steiner, Zhimian Cao, Di Fan, Junhui Chen, Jimin Yu, and Minhan Dai
EGUsphere, https://doi.org/10.5194/egusphere-2024-3492, https://doi.org/10.5194/egusphere-2024-3492, 2024
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Coccolithophore calcite accounts for a major fraction of particulate inorganic carbon (PIC) standing stocks in the western North Pacific, with a markedly higher contribution in the oligotrophic subtropical gyre than in the Kuroshio-Oyashio transition region, which highlights the importance of coccolithophores for PIC production in the pelagic ocean. We also found extensive dissolution of coccolithophore calcite in the oversaturated shallow waters primarily driven by microbial metabolic activity.
Yawouvi Dodji Soviadan, Miriam Beck, Joelle Habib, Alberto Baudena, Laetitia Drago, Alexandre Accardo, Remi Laxenaire, Sabrina Speich, Peter Brandt, Rainer Kiko, and Lars Stemmann
EGUsphere, https://doi.org/10.5194/egusphere-2024-3302, https://doi.org/10.5194/egusphere-2024-3302, 2024
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Key parameters representing the gravity flux in global models are the sinking speed and the vertical attenuation of the exported material. We calculate for the first time, these parameters in situ for 6 intermittent blooms followed by export events using high-resolution (3 days) time series of 0–1000 m depth profiles from imaging sensor mounted on an Argo float. We show that sinking speed depends not only on size but also on the morphology of the particles, density being an important property.
Louise Delaigue, Gert-Jan Reichart, Chris Galley, Yasmina Ourradi, and Matthew Paul Humphreys
EGUsphere, https://doi.org/10.5194/egusphere-2024-2853, https://doi.org/10.5194/egusphere-2024-2853, 2024
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Our study analyzed pH in ocean surface waters to understand how they fluctuate with changes in temperature, salinity, and biological activities. We found that temperature mainly controls daily pH variations, but biological processes also play a role, especially in affecting CO2 levels between the ocean and atmosphere. Our research shows how these factors together maintain the balance of ocean chemistry, which is crucial for predicting changes in marine environments.
Medhavi Pandey, Haimanti Biswas, Daniel Birgel, Nicole Burdanowitz, and Birgit Gaye
Biogeosciences, 21, 4681–4698, https://doi.org/10.5194/bg-21-4681-2024, https://doi.org/10.5194/bg-21-4681-2024, 2024
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We analysed sea surface temperature (SST) proxy and plankton biomarkers in sediments that accumulate sinking material signatures from surface waters in the central Arabian Sea (21°–11° N, 64° E), a tropical basin impacted by monsoons. We saw a north–south SST gradient, and the biological proxies showed more organic matter from larger algae in the north. Smaller algae and zooplankton were more numerous in the south. These trends were related to ocean–atmospheric processes and oxygen availability.
Allison Hogikyan and Laure Resplandy
Biogeosciences, 21, 4621–4636, https://doi.org/10.5194/bg-21-4621-2024, https://doi.org/10.5194/bg-21-4621-2024, 2024
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Rising atmospheric CO2 influences ocean carbon chemistry, leading to ocean acidification. Global warming introduces spatial patterns in the intensity of ocean acidification. We show that the most prominent spatial patterns are controlled by warming-driven changes in rainfall and evaporation, not by the direct effect of warming on carbon chemistry and pH. These evaporation and rainfall patterns oppose acidification in saltier parts of the ocean and enhance acidification in fresher regions.
Shunya Koseki, Lander R. Crespo, Jerry Tjiputra, Filippa Fransner, Noel S. Keenlyside, and David Rivas
Biogeosciences, 21, 4149–4168, https://doi.org/10.5194/bg-21-4149-2024, https://doi.org/10.5194/bg-21-4149-2024, 2024
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We investigated how the physical biases of an Earth system model influence the marine biogeochemical processes in the tropical Atlantic. With four different configurations of the model, we have shown that the versions with better SST reproduction tend to better represent the primary production and air–sea CO2 flux in terms of climatology, seasonal cycle, and response to climate variability.
Lyuba Novi, Annalisa Bracco, Takamitsu Ito, and Yohei Takano
Biogeosciences, 21, 3985–4005, https://doi.org/10.5194/bg-21-3985-2024, https://doi.org/10.5194/bg-21-3985-2024, 2024
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We explored the relationship between oxygen and stratification in the North Pacific Ocean using a combination of data mining and machine learning. We used isopycnic potential vorticity (IPV) as an indicator to quantify ocean ventilation and analyzed its predictability, a strong O2–IPV connection, and predictability for IPV in the tropical Pacific. This opens new routes for monitoring ocean O2 through few observational sites co-located with more abundant IPV measurements in the tropical Pacific.
Winfred Marshal, Jing Xiang Chung, Nur Hidayah Roseli, Roswati Md Amin, and Mohd Fadzil Bin Mohd Akhir
Biogeosciences, 21, 4007–4035, https://doi.org/10.5194/bg-21-4007-2024, https://doi.org/10.5194/bg-21-4007-2024, 2024
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This study stands out for thoroughly examining CMIP6 ESMs' ability to simulate biogeochemical variables in the southern South China Sea, an economically important region. It assesses variables like chlorophyll, phytoplankton, nitrate, and oxygen on annual and seasonal scales. While global assessments exist, this study addresses a gap by objectively ranking 13 CMIP6 ocean biogeochemistry models' performance at a regional level, focusing on replicating specific observed biogeochemical variables.
Jens Terhaar
Biogeosciences, 21, 3903–3926, https://doi.org/10.5194/bg-21-3903-2024, https://doi.org/10.5194/bg-21-3903-2024, 2024
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Despite the ocean’s importance in the carbon cycle and hence the climate, observing the ocean carbon sink remains challenging. Here, I use an ensemble of 12 models to understand drivers of decadal trends of the past, present, and future ocean carbon sink. I show that 80 % of the decadal trends in the multi-model mean ocean carbon sink can be explained by changes in decadal trends in atmospheric CO2. The remaining 20 % are due to internal climate variability and ocean heat uptake.
Reiner Steinfeldt, Monika Rhein, and Dagmar Kieke
Biogeosciences, 21, 3839–3867, https://doi.org/10.5194/bg-21-3839-2024, https://doi.org/10.5194/bg-21-3839-2024, 2024
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We calculate the amount of anthropogenic carbon (Cant) in the Atlantic for the years 1990, 2000, 2010 and 2020. Cant is the carbon that is taken up by the ocean as a result of humanmade CO2 emissions. To determine the amount of Cant, we apply a technique that is based on the observations of other humanmade gases (e.g., chlorofluorocarbons). Regionally, changes in ocean ventilation have an impact on the storage of Cant. Overall, the increase in Cant is driven by the rising CO2 in the atmosphere.
Stephanie Delacroix, Tor Jensen Nystuen, August E. Dessen Tobiesen, Andrew L. King, and Erik Höglund
Biogeosciences, 21, 3677–3690, https://doi.org/10.5194/bg-21-3677-2024, https://doi.org/10.5194/bg-21-3677-2024, 2024
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The addition of alkaline minerals into the ocean might reduce excessive anthropogenic CO2 emissions. Magnesium hydroxide can be added in large amounts because of its low seawater solubility without reaching harmful pH levels. The toxicity effect results of magnesium hydroxide, by simulating the expected concentrations from a ship's dispersion scenario, demonstrated low impacts on both sensitive and local assemblages of marine microalgae when compared to calcium hydroxide.
Precious Mongwe, Matthew Long, Takamitsu Ito, Curtis Deutsch, and Yeray Santana-Falcón
Biogeosciences, 21, 3477–3490, https://doi.org/10.5194/bg-21-3477-2024, https://doi.org/10.5194/bg-21-3477-2024, 2024
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We use a collection of measurements that capture the physiological sensitivity of organisms to temperature and oxygen and a CESM1 large ensemble to investigate how natural climate variations and climate warming will impact the ability of marine heterotrophic marine organisms to support habitats in the future. We find that warming and dissolved oxygen loss over the next several decades will reduce the volume of ocean habitats and will increase organisms' vulnerability to extremes.
Charly A. Moras, Tyler Cyronak, Lennart T. Bach, Renaud Joannes-Boyau, and Kai G. Schulz
Biogeosciences, 21, 3463–3475, https://doi.org/10.5194/bg-21-3463-2024, https://doi.org/10.5194/bg-21-3463-2024, 2024
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We investigate the effects of mineral grain size and seawater salinity on magnesium hydroxide dissolution and calcium carbonate precipitation kinetics for ocean alkalinity enhancement. Salinity did not affect the dissolution, but calcium carbonate formed earlier at lower salinities due to the lower magnesium and dissolved organic carbon concentrations. Smaller grain sizes dissolved faster but calcium carbonate precipitated earlier, suggesting that medium grain sizes are optimal for kinetics.
Rosie M. Sheward, Christina Gebühr, Jörg Bollmann, and Jens O. Herrle
Biogeosciences, 21, 3121–3141, https://doi.org/10.5194/bg-21-3121-2024, https://doi.org/10.5194/bg-21-3121-2024, 2024
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How quickly do marine microorganisms respond to salinity stress? Our experiments with the calcifying marine plankton Emiliania huxleyi show that growth and cell morphology responded to salinity stress within as little as 24–48 hours, demonstrating that morphology and calcification are sensitive to salinity over a range of timescales. Our results have implications for understanding the short-term role of E. huxleyi in biogeochemical cycles and in size-based paleoproxies for salinity.
Laura Marín-Samper, Javier Arístegui, Nauzet Hernández-Hernández, Joaquín Ortiz, Stephen D. Archer, Andrea Ludwig, and Ulf Riebesell
Biogeosciences, 21, 2859–2876, https://doi.org/10.5194/bg-21-2859-2024, https://doi.org/10.5194/bg-21-2859-2024, 2024
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Our planet is facing a climate crisis. Scientists are working on innovative solutions that will aid in capturing the hard to abate emissions before it is too late. Exciting research reveals that ocean alkalinity enhancement, a key climate change mitigation strategy, does not harm phytoplankton, the cornerstone of marine ecosystems. Through meticulous study, we may have uncovered a positive relationship: up to a specific limit, enhancing ocean alkalinity boosts photosynthesis by certain species.
Kieran Curran, Tracy Villareal, and Robert T. Letscher
EGUsphere, https://doi.org/10.5194/egusphere-2024-1416, https://doi.org/10.5194/egusphere-2024-1416, 2024
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This work provides a two year record of marine organic gel concentrations from an open ocean site in the subtropical North Pacific Ocean north of Hawaii. These microscopic gels are investigated to understand their importance as an understudied component of organic matter cycling by marine microbes. We find an important role for gel cycling during the summer months, helping explain previously contradictory estimates of nutrient supply and demand for the subtropical ocean.
France Van Wambeke, Pascal Conan, Mireille Pujo-Pay, Vincent Taillandier, Olivier Crispi, Alexandra Pavlidou, Sandra Nunige, Morgane Didry, Christophe Salmeron, and Elvira Pulido-Villena
Biogeosciences, 21, 2621–2640, https://doi.org/10.5194/bg-21-2621-2024, https://doi.org/10.5194/bg-21-2621-2024, 2024
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Phosphomonoesterase (PME) and phosphodiesterase (PDE) activities over the epipelagic zone are described in the eastern Mediterranean Sea in winter and autumn. The types of concentration kinetics obtained for PDE (saturation at 50 µM, high Km, high turnover times) compared to those of PME (saturation at 1 µM, low Km, low turnover times) are discussed in regard to the possible inequal distribution of PDE and PME in the size continuum of organic material and accessibility to phosphodiesters.
Jenny Hieronymus, Magnus Hieronymus, Matthias Gröger, Jörg Schwinger, Raffaele Bernadello, Etienne Tourigny, Valentina Sicardi, Itzel Ruvalcaba Baroni, and Klaus Wyser
Biogeosciences, 21, 2189–2206, https://doi.org/10.5194/bg-21-2189-2024, https://doi.org/10.5194/bg-21-2189-2024, 2024
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The timing of the net primary production annual maxima in the North Atlantic in the period 1750–2100 is investigated using two Earth system models and the high-emissions scenario SSP5-8.5. It is found that, for most of the region, the annual maxima occur progressively earlier, with the most change occurring after the year 2000. Shifts in the seasonality of the primary production may impact the entire ecosystem, which highlights the need for long-term monitoring campaigns in this area.
Nicole M. Travis, Colette L. Kelly, and Karen L. Casciotti
Biogeosciences, 21, 1985–2004, https://doi.org/10.5194/bg-21-1985-2024, https://doi.org/10.5194/bg-21-1985-2024, 2024
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We conducted experimental manipulations of light level on microbial communities from the primary nitrite maximum. Overall, while individual microbial processes have different directions and magnitudes in their response to increasing light, the net community response is a decline in nitrite production with increasing light. We conclude that while increased light may decrease net nitrite production, high-light conditions alone do not exclude nitrification from occurring in the surface ocean.
Zoë Rebecca van Kemenade, Zeynep Erdem, Ellen Christine Hopmans, Jaap Smede Sinninghe Damsté, and Darci Rush
Biogeosciences, 21, 1517–1532, https://doi.org/10.5194/bg-21-1517-2024, https://doi.org/10.5194/bg-21-1517-2024, 2024
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The California Current system (CCS) hosts the eastern subtropical North Pacific oxygen minimum zone (ESTNP OMZ). This study shows anaerobic ammonium oxidizing (anammox) bacteria cause a loss of bioavailable nitrogen (N) in the ESTNP OMZ throughout the late Quaternary. Anammox occurred during both glacial and interglacial periods and was driven by the supply of organic matter and changes in ocean currents. These findings may have important consequences for biogeochemical models of the CCS.
Cathy Wimart-Rousseau, Tobias Steinhoff, Birgit Klein, Henry Bittig, and Arne Körtzinger
Biogeosciences, 21, 1191–1211, https://doi.org/10.5194/bg-21-1191-2024, https://doi.org/10.5194/bg-21-1191-2024, 2024
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The marine CO2 system can be measured independently and continuously by BGC-Argo floats since numerous pH sensors have been developed to suit these autonomous measurements platforms. By applying the Argo correction routines to float pH data acquired in the subpolar North Atlantic Ocean, we report the uncertainty and lack of objective criteria associated with the choice of the reference method as well the reference depth for the pH correction.
Sabine Mecking and Kyla Drushka
Biogeosciences, 21, 1117–1133, https://doi.org/10.5194/bg-21-1117-2024, https://doi.org/10.5194/bg-21-1117-2024, 2024
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This study investigates whether northeastern North Pacific oxygen changes may be caused by surface density changes in the northwest as water moves along density horizons from the surface into the subsurface ocean. A correlation is found with a lag that about matches the travel time of water from the northwest to the northeast. Salinity is the main driver causing decadal changes in surface density, whereas salinity and temperature contribute about equally to long-term declining density trends.
Takamitsu Ito, Hernan E. Garcia, Zhankun Wang, Shoshiro Minobe, Matthew C. Long, Just Cebrian, James Reagan, Tim Boyer, Christopher Paver, Courtney Bouchard, Yohei Takano, Seth Bushinsky, Ahron Cervania, and Curtis A. Deutsch
Biogeosciences, 21, 747–759, https://doi.org/10.5194/bg-21-747-2024, https://doi.org/10.5194/bg-21-747-2024, 2024
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This study aims to estimate how much oceanic oxygen has been lost and its uncertainties. One major source of uncertainty comes from the statistical gap-filling methods. Outputs from Earth system models are used to generate synthetic observations where oxygen data are extracted from the model output at the location and time of historical oceanographic cruises. Reconstructed oxygen trend is approximately two-thirds of the true trend.
Robert W. Izett, Katja Fennel, Adam C. Stoer, and David P. Nicholson
Biogeosciences, 21, 13–47, https://doi.org/10.5194/bg-21-13-2024, https://doi.org/10.5194/bg-21-13-2024, 2024
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This paper provides an overview of the capacity to expand the global coverage of marine primary production estimates using autonomous ocean-going instruments, called Biogeochemical-Argo floats. We review existing approaches to quantifying primary production using floats, provide examples of the current implementation of the methods, and offer insights into how they can be better exploited. This paper is timely, given the ongoing expansion of the Biogeochemical-Argo array.
Qian Liu, Yingjie Liu, and Xiaofeng Li
Biogeosciences, 20, 4857–4874, https://doi.org/10.5194/bg-20-4857-2023, https://doi.org/10.5194/bg-20-4857-2023, 2023
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In the Southern Ocean, abundant eddies behave opposite to our expectations. That is, anticyclonic (cyclonic) eddies are cold (warm). By investigating the variations of physical and biochemical parameters in eddies, we find that abnormal eddies have unique and significant effects on modulating the parameters. This study fills a gap in understanding the effects of abnormal eddies on physical and biochemical parameters in the Southern Ocean.
Caroline Ulses, Claude Estournel, Patrick Marsaleix, Karline Soetaert, Marine Fourrier, Laurent Coppola, Dominique Lefèvre, Franck Touratier, Catherine Goyet, Véronique Guglielmi, Fayçal Kessouri, Pierre Testor, and Xavier Durrieu de Madron
Biogeosciences, 20, 4683–4710, https://doi.org/10.5194/bg-20-4683-2023, https://doi.org/10.5194/bg-20-4683-2023, 2023
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Deep convection plays a key role in the circulation, thermodynamics, and biogeochemical cycles in the Mediterranean Sea, considered to be a hotspot of biodiversity and climate change. In this study, we investigate the seasonal and annual budget of dissolved inorganic carbon in the deep-convection area of the northwestern Mediterranean Sea.
Daniela König and Alessandro Tagliabue
Biogeosciences, 20, 4197–4212, https://doi.org/10.5194/bg-20-4197-2023, https://doi.org/10.5194/bg-20-4197-2023, 2023
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Using model simulations, we show that natural and anthropogenic changes in the global climate leave a distinct fingerprint in the isotopic signatures of iron in the surface ocean. We find that these climate effects on iron isotopes are often caused by the redistribution of iron from different external sources to the ocean, due to changes in ocean currents, and by changes in algal growth, which take up iron. Thus, isotopes may help detect climate-induced changes in iron supply and algal uptake.
Chloé Baumas, Robin Fuchs, Marc Garel, Jean-Christophe Poggiale, Laurent Memery, Frédéric A. C. Le Moigne, and Christian Tamburini
Biogeosciences, 20, 4165–4182, https://doi.org/10.5194/bg-20-4165-2023, https://doi.org/10.5194/bg-20-4165-2023, 2023
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Through the sink of particles in the ocean, carbon (C) is exported and sequestered when reaching 1000 m. Attempts to quantify C exported vs. C consumed by heterotrophs have increased. Yet most of the conducted estimations have led to C demands several times higher than C export. The choice of parameters greatly impacts the results. As theses parameters are overlooked, non-accurate values are often used. In this study we show that C budgets can be well balanced when using appropriate values.
Anna Belcher, Sian F. Henley, Katharine Hendry, Marianne Wootton, Lisa Friberg, Ursula Dallman, Tong Wang, Christopher Coath, and Clara Manno
Biogeosciences, 20, 3573–3591, https://doi.org/10.5194/bg-20-3573-2023, https://doi.org/10.5194/bg-20-3573-2023, 2023
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The oceans play a crucial role in the uptake of atmospheric carbon dioxide, particularly the Southern Ocean. The biological pumping of carbon from the surface to the deep ocean is key to this. Using sediment trap samples from the Scotia Sea, we examine biogeochemical fluxes of carbon, nitrogen, and biogenic silica and their stable isotope compositions. We find phytoplankton community structure and physically mediated processes are important controls on particulate fluxes to the deep ocean.
Asmita Singh, Susanne Fietz, Sandy J. Thomalla, Nicolas Sanchez, Murat V. Ardelan, Sébastien Moreau, Hanna M. Kauko, Agneta Fransson, Melissa Chierici, Saumik Samanta, Thato N. Mtshali, Alakendra N. Roychoudhury, and Thomas J. Ryan-Keogh
Biogeosciences, 20, 3073–3091, https://doi.org/10.5194/bg-20-3073-2023, https://doi.org/10.5194/bg-20-3073-2023, 2023
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Despite the scarcity of iron in the Southern Ocean, seasonal blooms occur due to changes in nutrient and light availability. Surprisingly, during an autumn bloom in the Antarctic sea-ice zone, the results from incubation experiments showed no significant photophysiological response of phytoplankton to iron addition. This suggests that ambient iron concentrations were sufficient, challenging the notion of iron deficiency in the Southern Ocean through extended iron-replete post-bloom conditions.
Benoît Pasquier, Mark Holzer, Matthew A. Chamberlain, Richard J. Matear, Nathaniel L. Bindoff, and François W. Primeau
Biogeosciences, 20, 2985–3009, https://doi.org/10.5194/bg-20-2985-2023, https://doi.org/10.5194/bg-20-2985-2023, 2023
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Modeling the ocean's carbon and oxygen cycles accurately is challenging. Parameter optimization improves the fit to observed tracers but can introduce artifacts in the biological pump. Organic-matter production and subsurface remineralization rates adjust to compensate for circulation biases, changing the pathways and timescales with which nutrients return to the surface. Circulation biases can thus strongly alter the system’s response to ecological change, even when parameters are optimized.
Priyanka Banerjee
Biogeosciences, 20, 2613–2643, https://doi.org/10.5194/bg-20-2613-2023, https://doi.org/10.5194/bg-20-2613-2023, 2023
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This study shows that atmospheric deposition is the most important source of iron to the upper northern Indian Ocean for phytoplankton growth. This is followed by iron from continental-shelf sediment. Phytoplankton increase following iron addition is possible only with high background levels of nitrate. Vertical mixing is the most important physical process supplying iron to the upper ocean in this region throughout the year. The importance of ocean currents in supplying iron varies seasonally.
Iris Kriest, Julia Getzlaff, Angela Landolfi, Volkmar Sauerland, Markus Schartau, and Andreas Oschlies
Biogeosciences, 20, 2645–2669, https://doi.org/10.5194/bg-20-2645-2023, https://doi.org/10.5194/bg-20-2645-2023, 2023
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Global biogeochemical ocean models are often subjectively assessed and tuned against observations. We applied different strategies to calibrate a global model against observations. Although the calibrated models show similar tracer distributions at the surface, they differ in global biogeochemical fluxes, especially in global particle flux. Simulated global volume of oxygen minimum zones varies strongly with calibration strategy and over time, rendering its temporal extrapolation difficult.
John C. Tracey, Andrew R. Babbin, Elizabeth Wallace, Xin Sun, Katherine L. DuRussel, Claudia Frey, Donald E. Martocello III, Tyler Tamasi, Sergey Oleynik, and Bess B. Ward
Biogeosciences, 20, 2499–2523, https://doi.org/10.5194/bg-20-2499-2023, https://doi.org/10.5194/bg-20-2499-2023, 2023
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Nitrogen (N) is essential for life; thus, its availability plays a key role in determining marine productivity. Using incubations of seawater spiked with a rare form of N measurable on a mass spectrometer, we quantified microbial pathways that determine marine N availability. The results show that pathways that recycle N have higher rates than those that result in its loss from biomass and present new evidence for anaerobic nitrite oxidation, a process long thought to be strictly aerobic.
Amanda Gerotto, Hongrui Zhang, Renata Hanae Nagai, Heather M. Stoll, Rubens César Lopes Figueira, Chuanlian Liu, and Iván Hernández-Almeida
Biogeosciences, 20, 1725–1739, https://doi.org/10.5194/bg-20-1725-2023, https://doi.org/10.5194/bg-20-1725-2023, 2023
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Based on the analysis of the response of coccolithophores’ morphological attributes in a laboratory dissolution experiment and surface sediment samples from the South China Sea, we proposed that the thickness shape (ks) factor of fossil coccoliths together with the normalized ks variation, which is the ratio of the standard deviation of ks (σ) over the mean ks (σ/ks), is a robust and novel proxy to reconstruct past changes in deep ocean carbon chemistry.
Katherine E. Turner, Doug M. Smith, Anna Katavouta, and Richard G. Williams
Biogeosciences, 20, 1671–1690, https://doi.org/10.5194/bg-20-1671-2023, https://doi.org/10.5194/bg-20-1671-2023, 2023
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We present a new method for reconstructing ocean carbon using climate models and temperature and salinity observations. To test this method, we reconstruct modelled carbon using synthetic observations consistent with current sampling programmes. Sensitivity tests show skill in reconstructing carbon trends and variability within the upper 2000 m. Our results indicate that this method can be used for a new global estimate for ocean carbon content.
Alexandre Mignot, Hervé Claustre, Gianpiero Cossarini, Fabrizio D'Ortenzio, Elodie Gutknecht, Julien Lamouroux, Paolo Lazzari, Coralie Perruche, Stefano Salon, Raphaëlle Sauzède, Vincent Taillandier, and Anna Teruzzi
Biogeosciences, 20, 1405–1422, https://doi.org/10.5194/bg-20-1405-2023, https://doi.org/10.5194/bg-20-1405-2023, 2023
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Numerical models of ocean biogeochemistry are becoming a major tool to detect and predict the impact of climate change on marine resources and monitor ocean health. Here, we demonstrate the use of the global array of BGC-Argo floats for the assessment of biogeochemical models. We first detail the handling of the BGC-Argo data set for model assessment purposes. We then present 23 assessment metrics to quantify the consistency of BGC model simulations with respect to BGC-Argo data.
Alban Planchat, Lester Kwiatkowski, Laurent Bopp, Olivier Torres, James R. Christian, Momme Butenschön, Tomas Lovato, Roland Séférian, Matthew A. Chamberlain, Olivier Aumont, Michio Watanabe, Akitomo Yamamoto, Andrew Yool, Tatiana Ilyina, Hiroyuki Tsujino, Kristen M. Krumhardt, Jörg Schwinger, Jerry Tjiputra, John P. Dunne, and Charles Stock
Biogeosciences, 20, 1195–1257, https://doi.org/10.5194/bg-20-1195-2023, https://doi.org/10.5194/bg-20-1195-2023, 2023
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Ocean alkalinity is critical to the uptake of atmospheric carbon and acidification in surface waters. We review the representation of alkalinity and the associated calcium carbonate cycle in Earth system models. While many parameterizations remain present in the latest generation of models, there is a general improvement in the simulated alkalinity distribution. This improvement is related to an increase in the export of biotic calcium carbonate, which closer resembles observations.
Cited articles
Altabet, M. A., Ryabenko, E., Stramma, L., Wallace, D. W. R., Frank, M., Grasse, P., and Lavik, G.: An eddy-stimulated hotspot for fixed nitrogen-loss from the Peru oxygen minimum zone, Biogeosciences, 9, 4897–4908, https://doi.org/10.5194/bg-9-4897-2012, 2012.
Bonin, P., Gilewicz, M., and Bertrand, J. C.: Effects of oxygen on each step of denitrification on Pseudomonas nautica, Can. J. Microbiol., 35, 1061–1064, 1989.
Chaigneau, A.: Eddy characteristics in the eastern South Pacific, J. Geophys. Res., 110, C06005, https://doi.org/10.1029/2004JC002815, 2005.
Chaigneau, A., Gizolme, A., and Grados, C.: Mesoscale eddies off Peru in altimeter records: Identification algorithms and eddy spatio-temporal patterns, Prog. Oceanogr., 79, 106–119, https://doi.org/10.1016/j.pocean.2008.10.013, 2008.
Chaigneau, A., Eldin, G., and Dewitte, B.: Eddy activity in the four major upwelling systems from satellite altimetry (1992–2007), Prog. Oceanogr., 83, 117–123, https://doi.org/10.1016/j.pocean.2009.07.012, 2009.
Chaigneau, A., Le Texier, M., Eldin, G., Grados, C., and Pizarro, O.: Vertical structure of mesoscale eddies in the eastern South Pacific Ocean: A composite analysis from altimetry and Argo profiling floats, J. Geophys. Res., 116, C11025, https://doi.org/10.1029/2011JC007134, 2011.
Chelton, D. B., Schlax, M. G., Samelson, R. M., and de Szoeke, R. A.: Global observations of large oceanic eddies, Geophys. Res. Lett., 34, L15606, https://doi.org/10.1029/2007GL030812, 2007.
Chelton, D. B., Schlax, M. G., and Samelson, R. M.: Global observations of nonlinear mesoscale eddies, Prog. Oceanogr., 91, 167–216, https://doi.org/10.1016/j.pocean.2011.01.002, 2011.
Cornejo, M. and Farías, L.: Following the N2O consumption in the oxygen minimum zone of the eastern South Pacific, Biogeosciences, 9, 3205–3212, https://doi.org/10.5194/bg-9-3205-2012, 2012a.
Cornejo, M. and Farías, L.: Meridional variability of the vertical structure and air–sea fluxes of N2O off central Chile (30–40° S), Prog. Oceanogr., 92–95, 33–42, https://doi.org/10.1016/j.pocean.2011.07.016, 2012b.
Cornejo, M., Murillo, A. A., and Farías, L.: An unaccounted for N2O sink in the surface water of the eastern subtropical South Pacific: Physical versus biological mechanisms, Prog. Oceanogr., https://doi.org/10.1016/j.pocean.2014.12.016, 2015.
Dalsgaard, T., Thamdrup, B., Farías, L., and Peter Revsbech, N.: Anammox and denitrification in the oxygen minimum zone of the eastern South Pacific, Limnol. Oceanogr., 57, 1331–1346, https://doi.org/10.4319/lo.2012.57.5.1331, 2012.
Deutsch, C., Gruber, N., Key, R. M., and Sarmiento, J. L.: Denitrification and N2 fixation in the Pacific Ocean, Global Biogeochem. Cy., 15, 483–506, 2001.
Faías, L.: Remineralization and accumulation of organic carbon and nitrogen in marine sediments of eutrophic bays: the case of the Bay of Concepcion, Chile, Estuar. Coast. Shelf Sci., 57, 829–841, https://doi.org/10.1016/S0272-7714(02)00414-6, 2003.
Fuenzalida, R., Schneider, W., Blanco, J. L., Garcés-Vargas, J., and Bravo, L.: Sistema de corrientes Chile-Perú y masas de agua entre Caldera e Isla de Pascua, Com. Ocean. Nac., 2006.
Garcia, H. E., Locarnini, R. A., Boyer, T. P., Antonov, J. I., Baranova, O. K., Zweng, M. M., Reagan, J. R., and Johnson, D. R.: World ocean atlas 2013, Volume 3, Dissolved Oxygen, Apparent Oxygen Utilization, and Oxygen Saturation, 2014.
Grasshoff, K., Ehrhardt, M., and Kremling, K.: Methods of seawater analysis, edited by: Grasshoff, K., Kremling, K., and Ehrhardt, M., Verlag Chemie, 1983.
Gruber, N.: Warming up, turning sour, losing breath: ocean biogeochemistry under global change, Philos. T. R. Soc. A., 369, 1980–96, https://doi.org/10.1098/rsta.2011.0003, 2011.
Hormazábal, S., Combes, V., Morales, C., Correa-Ramirez, M. A., Di Lorenzo, E., and Nuñez, S.: Intrathermocline eddies in the coastal transition zone off central Chile, 2013.
Johnson, G. C. and McTaggart, K. E.: Equatorial Pacific 13 °C Water Eddies in the Eastern Subtropical South Pacific Ocean*, J. Phys. Oceanogr., 40, 226–236, https://doi.org/10.1175/2009JPO4287.1, 2010.
Karsenti, E., Acinas, S. G., Bork, P., Bowler, C., De Vargas, C., Raes, J., Sullivan, M., Arendt, D., Benzoni, F., Claverie, J.-M., Follows, M., Gorsky, G., Hingamp, P., Iudicone, D., Jaillon, O., Kandels-Lewis, S., Krzic, U., Not, F., Ogata, H., Pesant, S., Reynaud, E. G., Sardet, C., Sieracki, M. E., Speich, S., Velayoudon, D., Weissenbach, J., and Wincker, P.: A holistic approach to marine eco-systems biology, PLoS Biol., 9, e1001177, https://doi.org/10.1371/journal.pbio.1001177, 2011.
Karstensen, J., Stramma, L., and Visbeck, M.: Oxygen minimum zones in the eastern tropical Atlantic and Pacific oceans, Prog. Oceanogr., 77, 331–350, 2008.
Karstensen, J., Fiedler, B., Schütte, F., Brandt, P., Körtzinger, A., Fischer, G., Zantopp, R., Hahn, J., Visbeck, M., and Wallace, W.: Open Ocean dead zone in the tropical North Atlantic Ocean, Biogeosciences, 12, 1–9, https://doi.org/10.5194/bg-12-1-2015, 2015.
Körtzinger, A., Schimanski, J., and Send, U.: High quality oxygen measurements from profiling floats: A promising new technique, J. Atmos. Ocean. Technol., 22, 302–308, 2005.
Lam, P. and Kuypers, M. M. M.: Microbial Nitrogen Cycling Processes in Oxygen Minimum Zones, Annu. Rev. Mar. Sci., 3, 317–345, https://doi.org/10.1146/annurev-marine-120709-142814, 2011.
Lukas, R. and Santiago-Mandujano, F.: Extreme water mass anomaly observed in the Hawaii Ocean Time-series, Geophys. Res. Lett., 28, 2931–2934, 2001.
McAullife, C.: GC determination of solutes by multiple phase equilibration, Chem. Technol., 1, 46–51, 1971.
McGillicuddy, D., Robinson, A., Siegel, D., Jannasch, H., Johnson, R., Dickey, T., McNeil, J., Michaels, A., and Knap, A.: Influence of mesoscale eddies on new production in the Sargasso Sea, Nature, 395, 263–266, 1998.
Morales, C. E., Loreto Torreblanca, M., Hormazabal, S., Correa-Ramírez, M., Nuñez, S., and Hidalgo, P.: Mesoscale structure of copepod assemblages in the coastal transition zone and oceanic waters off central-southern Chile, Prog. Oceanogr., 84, 158–173, https://doi.org/10.1016/j.pocean.2009.12.001, 2010.
Morales, C. E., Hormazabal, S., Correa-Ramirez, M., Pizarro, O., Silva, N., Fernandez, C., Anabalón, V., and Torreblanca, M. L.: Mesoscale variability and nutrient–phytoplankton distributions off central-southern Chile during the upwelling season: The influence of mesoscale eddies, Prog. Oceanogr., 104, 17–29, https://doi.org/10.1016/j.pocean.2012.04.015, 2012.
Okubo, A.: Horizontal dispersion of floatable particles in the vicinity of velocity singularities such as convergences, Deep-Sea Res., 17, 445–454, 1970.
Picheral, M., Searson, S., Taillandier, V., Bricaud, A., Boss, E., Stemmann, L., Gorsky, G., and Consortium, Tara Oceans Coordinators Tara Oceans Expedition, P.: Vertical profiles of environmental parameters measured from physical, optical and imaging sensors during Tara Oceans expedition 2009–2013, Pangaea, https://doi.org/10.1594/PANGAEA.836321, 2014.
Pizarro, G., Montecino, V., Astoreca, R., Alarcón, G., Yuras, G., and Guzmán, L.: Variabilidad espacial de condiciones bio-òpticas de la columna de agua entre las costas de Chile insular y continental. Primavera 1999 y 2000, Cienc. Tecnol. Mar., 29, 45–58, 2006.
Pizarro, O., Ramírez, N., Castillo, M., Cifuentes, U., Rojas, W., and Pizarro-Koch, M.: Underwater glider observations in the oxygen minimum zone off central Chile, B. Am. Meteorol. Soc., https://doi.org/10.1175/BAMS-D-14-00040.1, 2015.
Roullier, F., Berline, L., Guidi, L., Durrieu De Madron, X., Picheral, M., Sciandra, A., Pesant, S., and Stemmann, L.: Particle size distribution and estimated carbon flux across the Arabian Sea oxygen minimum zone, Biogeosciences, 11, 4541–4557, https://doi.org/10.5194/bg-11-4541-2014, 2014.
Sangrà, P., Pascual, A., Rodríguez-Santana, Á., Machín, F., Mason, E., McWilliams, J. C., Pelegrí, J. L., Dong, C., Rubio, A., Arístegui, J., Marrero-Díaz, Á., Hernández-Guerra, A., Martínez-Marrero, A., and Auladell, M.: The Canary Eddy Corridor: A major pathway for long-lived eddies in the subtropical North Atlantic, Deep-Sea Res. Pt. I, 56, 2100–2114, https://doi.org/10.1016/j.dsr.2009.08.008, 2009.
Silva, N., Rojas, N., and Fedele, A.: Water masses in the Humboldt Current System: Properties, distribution, and the nitrate deficit as a chemical water mass tracer for Equatorial Subsurface Water off Chile, Deep-Sea Res. Pt. II, 56, 1004–1020, https://doi.org/10.1016/j.dsr2.2008.12.013, 2009.
Stramma, L., Bange, H. W., Czeschel, R., Lorenzo, A., and Frank, M.: On the role of mesoscale eddies for the biological productivity and biogeochemistry in the eastern tropical Pacific Ocean off Peru, Biogeosciences, 10, 7293–7306, https://doi.org/10.5194/bg-10-7293-2013, 2013.
Stramma, L., Weller, R. A., Czeschel, R., and Bigorre, S.: Eddies and an extreme water mass anomaly observed in the eastern south Pacific at the Stratus mooring, J. Geophys. Res.-Ocean., 119, 1068–1083, 2014.
Sweeney, E. N., McGillicuddy, D. J., and Buesseler, K. O.: Biogeochemical impacts due to mesoscale eddy activity in the Sargasso Sea as measured at the Bermuda Atlantic Time-series Study (BATS), Deep-Sea Res. Pt. II, 50, 3017–3039, https://doi.org/10.1016/j.dsr2.2003.07.008, 2003.
Uchida, H., Kawano, T., Kaneko, I., and Fukasawa, M.: In situ calibration of optode-based oxygen sensors, J. Atmos. Ocean. Technol., 25, 2271–2281, 2008.
Weiss, J.: The dynamics of enstrophy transfer in two-dimensional hydrodynamics, Physica D, 48, 273–294, 1991.
Xiu, P. and Chai, F.: Modeled biogeochemical responses to mesoscale eddies in the South China Sea, J. Geophys. Res., 116, C10006, https://doi.org/10.1029/2010JC006800, 2011.
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