Articles | Volume 18, issue 10
https://doi.org/10.5194/bg-18-3005-2021
© Author(s) 2021. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/bg-18-3005-2021
© Author(s) 2021. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Ideas and perspectives
| 
19 May 2021
Ideas and perspectives |
| 19 May 2021
| 19 May 2021
Ideas and perspectives: Biogeochemistry – some key foci for the future
Dept. of Geological Science, University of Florida, Gainesville, FL,
USA
Madhur Anand
School of Environmental Sciences, University of Guelph, Guelph,
Ontario, Canada
Chris T. Bauch
University of Waterloo, Department of Applied Mathematics, Waterloo, Canada
Donald E. Canfield
Nordcee, University of Southern Denmark, Odense, Denmark
Luc De Meester
Dept. of Biology, University of Leuven, Leuven, Belgium
Leibniz Institut für Gewässerökologie und Binnenfischerei
(IGB), Berlin, Germany
Institute of Biology, Freie Universität Berlin, Berlin, Germany
Katja Fennel
Dept. of Oceanography, Dalhousie University, Halifax, Nova Scotia,
Canada
Peter M. Groffman
City University of New York Advanced Science Research Center at the
Graduate Center, New York, NY, USA
Cary Institute of Ecosystem Studies,
Millbrook, NY, USA
Michael L. Pace
Dept. of Environmental Sciences, University of
Virginia, Charlottesville, VA, USA
Mak Saito
Marine Chemistry and Geochemistry, Woods Hole Oceanographic
Institution, Woods Hole, MA, USA
Myrna J. Simpson
Dept. of Physical and Environmental Sciences, University of Toronto,
Toronto, Canada
Related authors
Manab Kumar Dutta, Krishnan Sreelash, Damodaran Padmalal, Nicholas D. Ward, and Thomas S. Bianchi
Biogeosciences Discuss., https://doi.org/10.5194/bg-2022-200, https://doi.org/10.5194/bg-2022-200, 2022
Revised manuscript not accepted
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Indian estuaries contribute to 2.62 % and 1.09 % of global riverine DIC and DOC export to the ocean, respectively. Major Indian estuaries emit ~9718 Gg yr-1 and 3.27 Gg yr-1 of CO2 and CH4 to the atmosphere, respectively, which contributes ~0.67 % and ~0.12 % to global CO2 and CH4 outgassing from estuaries.
Craig Smeaton, Xingqian Cui, Thomas S. Bianchi, Alix G. Cage, John A. Howe, and William E. N. Austin
Biogeosciences Discuss., https://doi.org/10.5194/bg-2019-163, https://doi.org/10.5194/bg-2019-163, 2019
Publication in BG not foreseen
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The sediments in fjords are known to be important sites for locking carbon away for long periods of time (thousands of years) but the processes by which climate and human activity influence the development of these coastal carbon stores is poorly understood. A record of long-term sediment burial from a Scottish fjord allows us to investigate the role that humans and climate has played. The results indicate that both climate and humans have an impact on terrestrial ecosystems.
Krysten Rutherford, Katja Fennel, Lina Garcia Suarez, and Jasmin G. John
Biogeosciences, 21, 301–314, https://doi.org/10.5194/bg-21-301-2024, https://doi.org/10.5194/bg-21-301-2024, 2024
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We downscaled two mid-century (~2075) ocean model projections to a high-resolution regional ocean model of the northwest North Atlantic (NA) shelf. In one projection, the NA shelf break current practically disappears; in the other it remains almost unchanged. This leads to a wide range of possible future shelf properties. More accurate projections of coastal circulation features would narrow the range of possible outcomes of biogeochemical projections for shelf regions.
Mak A. Saito, Jaclyn K. Saunders, Matthew R. McIlvin, Erin M. Bertrand, John A. Breier, Margaret Mars Brisbin, Sophie M. Colston, Jaimee R. Compton, Tim J. Griffin, W. Judson Hervey, Robert L. Hettich, Pratik D. Jagtap, Michael Janech, Rod Johnson, Rick Keil, Hugo Kleikamp, Dagmar Leary, Lennart Martens, J. Scott P. McCain, Eli Moore, Subina Mehta, Dawn M. Moran, Jaqui Neibauer, Benjamin A. Neely, Michael V. Jakuba, Jim Johnson, Megan Duffy, Gerhard J. Herndl, Richard Giannone, Ryan Mueller, Brook L. Nunn, Martin Pabst, Samantha Peters, Andrew Rajczewski, Elden Rowland, Brian Searle, Tim Van Den Bossche, Gary J. Vora, Jacob R. Waldbauer, Haiyan Zheng, and Zihao Zhao
EGUsphere, https://doi.org/10.5194/egusphere-2023-3148, https://doi.org/10.5194/egusphere-2023-3148, 2024
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The ability to assess the functional capabilities of microbes in the environment is of increasing interest. Metaproteomics, the ability to measure proteins across microbial populations, has been increasing in capability and popularity in recent years. Here, an international team of scientists conducted an intercomparison study using samples collected from the North Atlantic Ocean and observed consistency in the peptides and proteins identified, their functions, and taxonomic origins.
Robert W. Izett, Katja Fennel, Adam C. Stoer, and David P. Nicholson
Biogeosciences, 21, 13–47, https://doi.org/10.5194/bg-21-13-2024, https://doi.org/10.5194/bg-21-13-2024, 2024
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This paper provides an overview of the capacity to expand the global coverage of marine primary production estimates using autonomous ocean-going instruments, called Biogeochemical-Argo floats. We review existing approaches to quantifying primary production using floats, provide examples of the current implementation of the methods, and offer insights into how they can be better exploited. This paper is timely, given the ongoing expansion of the Biogeochemical-Argo array.
Li-Qing Jiang, Adam V. Subhas, Daniela Basso, Katja Fennel, and Jean-Pierre Gattuso
State Planet, 2-oae2023, 13, https://doi.org/10.5194/sp-2-oae2023-13-2023, https://doi.org/10.5194/sp-2-oae2023-13-2023, 2023
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This paper provides comprehensive guidelines for ocean alkalinity enhancement (OAE) researchers on archiving their metadata and data. It includes data standards for various OAE studies and a universal metadata template. Controlled vocabularies for terms like alkalinization methods are included. These guidelines also apply to ocean acidification data.
Katja Fennel, Matthew C. Long, Christopher Algar, Brendan Carter, David Keller, Arnaud Laurent, Jann Paul Mattern, Ruth Musgrave, Andreas Oschlies, Josiane Ostiguy, Jaime B. Palter, and Daniel B. Whitt
State Planet, 2-oae2023, 9, https://doi.org/10.5194/sp-2-oae2023-9-2023, https://doi.org/10.5194/sp-2-oae2023-9-2023, 2023
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This paper describes biogeochemical models and modelling techniques for applications related to ocean alkalinity enhancement (OAE) research. Many of the most pressing OAE-related research questions cannot be addressed by observation alone but will require a combination of skilful models and observations. We present illustrative examples with references to further information; describe limitations, caveats, and future research needs; and provide practical recommendations.
Rebecca J. Chmiel, Riss M. Kell, Deepa Rao, Dawn M. Moran, Giacomo R. DiTullio, and Mak A. Saito
Biogeosciences, 20, 3997–4027, https://doi.org/10.5194/bg-20-3997-2023, https://doi.org/10.5194/bg-20-3997-2023, 2023
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Cobalt is an important micronutrient for plankton, yet it is often scarce throughout the oceans. A 2017/2018 expedition to coastal Antarctica, including regions of the Amundsen Sea and the Ross Sea, discovered lower concentrations of cobalt compared to two past expeditions in 2005 and 2006, particularly for the type of cobalt preferred as a nutrient by phytoplankton. This loss may be due to changing inputs of other nutrients, causing higher uptake of cobalt by plankton over the last decade.
Stefania A. Ciliberti, Enrique Alvarez Fanjul, Jay Pearlman, Kirsten Wilmer-Becker, Pierre Bahurel, Fabrice Ardhuin, Alain Arnaud, Mike Bell, Segolene Berthou, Laurent Bertino, Arthur Capet, Eric Chassignet, Stefano Ciavatta, Mauro Cirano, Emanuela Clementi, Gianpiero Cossarini, Gianpaolo Coro, Stuart Corney, Fraser Davidson, Marie Drevillon, Yann Drillet, Renaud Dussurget, Ghada El Serafy, Katja Fennel, Marcos Garcia Sotillo, Patrick Heimbach, Fabrice Hernandez, Patrick Hogan, Ibrahim Hoteit, Sudheer Joseph, Simon Josey, Pierre-Yves Le Traon, Simone Libralato, Marco Mancini, Pascal Matte, Angelique Melet, Yasumasa Miyazawa, Andrew M. Moore, Antonio Novellino, Andrew Porter, Heather Regan, Laia Romero, Andreas Schiller, John Siddorn, Joanna Staneva, Cecile Thomas-Courcoux, Marina Tonani, Jose Maria Garcia-Valdecasas, Jennifer Veitch, Karina von Schuckmann, Liying Wan, John Wilkin, and Romane Zufic
State Planet, 1-osr7, 2, https://doi.org/10.5194/sp-1-osr7-2-2023, https://doi.org/10.5194/sp-1-osr7-2-2023, 2023
Benjamin Richaud, Katja Fennel, Eric C. J. Oliver, Michael D. DeGrandpre, Timothée Bourgeois, Xianmin Hu, and Youyu Lu
The Cryosphere, 17, 2665–2680, https://doi.org/10.5194/tc-17-2665-2023, https://doi.org/10.5194/tc-17-2665-2023, 2023
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Sea ice is a dynamic carbon reservoir. Its seasonal growth and melt modify the carbonate chemistry in the upper ocean, with consequences for the Arctic Ocean carbon sink. Yet, the importance of this process is poorly quantified. Using two independent approaches, this study provides new methods to evaluate the error in air–sea carbon flux estimates due to the lack of biogeochemistry in ice in earth system models. Those errors range from 5 % to 30 %, depending on the model and climate projection.
Isaiah Farahbakhsh, Chris T. Bauch, and Madhur Anand
EGUsphere, https://doi.org/10.5194/egusphere-2023-1478, https://doi.org/10.5194/egusphere-2023-1478, 2023
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Mathematical models that include interactions between humans and the environment can provide valuable information to further our understanding of tipping points. Many aspects of human behaviour such as social norms and rates of social change can affect these tipping points in ways that are often specific to the system being modelled. Higher complexity of social networks can increase the likelihood of these transitions. We discuss how data is used to predict tipping points across many systems.
Arnaud Laurent, Haiyan Zhang, and Katja Fennel
Biogeosciences, 19, 5893–5910, https://doi.org/10.5194/bg-19-5893-2022, https://doi.org/10.5194/bg-19-5893-2022, 2022
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The Changjiang is the main terrestrial source of nutrients to the East China Sea (ECS). Nutrient delivery to the ECS has been increasing since the 1960s, resulting in low oxygen (hypoxia) during phytoplankton decomposition in summer. River phosphorus (P) has increased less than nitrogen, and therefore, despite the large nutrient delivery, phytoplankton growth can be limited by the lack of P. Here, we investigate this link between P limitation, phytoplankton production/decomposition, and hypoxia.
Manab Kumar Dutta, Krishnan Sreelash, Damodaran Padmalal, Nicholas D. Ward, and Thomas S. Bianchi
Biogeosciences Discuss., https://doi.org/10.5194/bg-2022-200, https://doi.org/10.5194/bg-2022-200, 2022
Revised manuscript not accepted
Short summary
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Indian estuaries contribute to 2.62 % and 1.09 % of global riverine DIC and DOC export to the ocean, respectively. Major Indian estuaries emit ~9718 Gg yr-1 and 3.27 Gg yr-1 of CO2 and CH4 to the atmosphere, respectively, which contributes ~0.67 % and ~0.12 % to global CO2 and CH4 outgassing from estuaries.
Rebecca Chmiel, Nathan Lanning, Allison Laubach, Jong-Mi Lee, Jessica Fitzsimmons, Mariko Hatta, William Jenkins, Phoebe Lam, Matthew McIlvin, Alessandro Tagliabue, and Mak Saito
Biogeosciences, 19, 2365–2395, https://doi.org/10.5194/bg-19-2365-2022, https://doi.org/10.5194/bg-19-2365-2022, 2022
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Dissolved cobalt is present in trace amounts in seawater and is a necessary nutrient for marine microbes. On a transect from the Alaskan coast to Tahiti, we measured seawater concentrations of dissolved cobalt. Here, we describe several interesting features of the Pacific cobalt cycle including cobalt sources along the Alaskan coast and Hawaiian vents, deep-ocean particle formation, cobalt activity in low-oxygen regions, and how our samples compare to a global biogeochemical model’s predictions.
Krysten Rutherford, Katja Fennel, Dariia Atamanchuk, Douglas Wallace, and Helmuth Thomas
Biogeosciences, 18, 6271–6286, https://doi.org/10.5194/bg-18-6271-2021, https://doi.org/10.5194/bg-18-6271-2021, 2021
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Using a regional model of the northwestern North Atlantic shelves in combination with a surface water time series and repeat transect observations, we investigate surface CO2 variability on the Scotian Shelf. The study highlights a strong seasonal cycle in shelf-wide pCO2 and spatial variability throughout the summer months driven by physical events. The simulated net flux of CO2 on the Scotian Shelf is out of the ocean, deviating from the global air–sea CO2 flux trend in continental shelves.
Natalie R. Cohen, Abigail E. Noble, Dawn M. Moran, Matthew R. McIlvin, Tyler J. Goepfert, Nicholas J. Hawco, Christopher R. German, Tristan J. Horner, Carl H. Lamborg, John P. McCrow, Andrew E. Allen, and Mak A. Saito
Biogeosciences, 18, 5397–5422, https://doi.org/10.5194/bg-18-5397-2021, https://doi.org/10.5194/bg-18-5397-2021, 2021
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A previous study documented an intense hydrothermal plume in the South Pacific Ocean; however, the iron release associated with this plume and the impact on microbiology were unclear. We describe metal concentrations associated with multiple hydrothermal plumes in this region and protein signatures of plume-influenced microbes. Our findings demonstrate that resources released from these systems can be transported away from their source and may alter the physiology of surrounding microbes.
Bin Wang, Katja Fennel, and Liuqian Yu
Ocean Sci., 17, 1141–1156, https://doi.org/10.5194/os-17-1141-2021, https://doi.org/10.5194/os-17-1141-2021, 2021
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We demonstrate that even sparse BGC-Argo profiles can substantially improve biogeochemical prediction via a priori model tuning. By assimilating satellite surface chlorophyll and physical observations, subsurface distributions of physical properties and nutrients were improved immediately. The improvement of subsurface chlorophyll was modest initially but was greatly enhanced after adjusting the parameterization for light attenuation through further a priori tuning.
Arnaud Laurent, Katja Fennel, and Angela Kuhn
Biogeosciences, 18, 1803–1822, https://doi.org/10.5194/bg-18-1803-2021, https://doi.org/10.5194/bg-18-1803-2021, 2021
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CMIP5 and CMIP6 models, and a high-resolution regional model, were evaluated by comparing historical simulations with observations in the northwest North Atlantic, a climate-sensitive and biologically productive ocean margin region. Many of the CMIP models performed poorly for biological properties. There is no clear link between model resolution and skill in the global models, but there is an overall improvement in performance in CMIP6 from CMIP5. The regional model performed best.
Haiyan Zhang, Katja Fennel, Arnaud Laurent, and Changwei Bian
Biogeosciences, 17, 5745–5761, https://doi.org/10.5194/bg-17-5745-2020, https://doi.org/10.5194/bg-17-5745-2020, 2020
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In coastal seas, low oxygen, which is detrimental to coastal ecosystems, is increasingly caused by man-made nutrients from land. This is especially so near mouths of major rivers, including the Changjiang in the East China Sea. Here a simulation model is used to identify the main factors determining low-oxygen conditions in the region. High river discharge is identified as the prime cause, while wind and intrusions of open-ocean water modulate the severity and extent of low-oxygen conditions.
Randelle M. Bundy, Alessandro Tagliabue, Nicholas J. Hawco, Peter L. Morton, Benjamin S. Twining, Mariko Hatta, Abigail E. Noble, Mattias R. Cape, Seth G. John, Jay T. Cullen, and Mak A. Saito
Biogeosciences, 17, 4745–4767, https://doi.org/10.5194/bg-17-4745-2020, https://doi.org/10.5194/bg-17-4745-2020, 2020
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Cobalt (Co) is an essential nutrient for ocean microbes and is scarce in most areas of the ocean. This study measured Co concentrations in the Arctic Ocean for the first time and found that Co levels are extremely high in the surface waters of the Canadian Arctic. Although the Co primarily originates from the shelf, the high concentrations persist throughout the central Arctic. Co in the Arctic appears to be increasing over time and might be a source of Co to the North Atlantic.
Christopher Gordon, Katja Fennel, Clark Richards, Lynn K. Shay, and Jodi K. Brewster
Biogeosciences, 17, 4119–4134, https://doi.org/10.5194/bg-17-4119-2020, https://doi.org/10.5194/bg-17-4119-2020, 2020
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We describe a method for correcting errors in oxygen optode measurements on autonomous platforms in the ocean. The errors result from the relatively slow response time of the sensor. The correction method includes an in situ determination of the effective response time and requires the time stamps of the individual measurements. It is highly relevant for the BGC-Argo program and also applicable to gliders. We also explore if diurnal changes in oxygen can be obtained from profiling floats.
Bin Wang, Katja Fennel, Liuqian Yu, and Christopher Gordon
Biogeosciences, 17, 4059–4074, https://doi.org/10.5194/bg-17-4059-2020, https://doi.org/10.5194/bg-17-4059-2020, 2020
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We assess trade-offs between different types of biological observations, specifically satellite ocean color and BGC-Argo profiles and the benefits of combining both for optimizing a biogeochemical model of the Gulf of Mexico. Using all available observations leads to significant improvements in observed and unobserved variables (including primary production and C export). Our results highlight the significant benefits of BGC-Argo measurements for biogeochemical model optimization and validation.
Fabian Große, Katja Fennel, Haiyan Zhang, and Arnaud Laurent
Biogeosciences, 17, 2701–2714, https://doi.org/10.5194/bg-17-2701-2020, https://doi.org/10.5194/bg-17-2701-2020, 2020
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In the East China Sea, hypoxia occurs frequently from spring to fall due to high primary production and subsequent decomposition of organic matter. Nitrogen inputs from the Changjiang and the open ocean have been suggested to contribute to hypoxia formation. We used a numerical modelling approach to quantify the relative contributions of these nitrogen sources. We found that the Changjiang dominates, which suggests that nitrogen management in the watershed would improve oxygen conditions.
Noelle A. Held, Eric A. Webb, Matthew M. McIlvin, David A. Hutchins, Natalie R. Cohen, Dawn M. Moran, Korinna Kunde, Maeve C. Lohan, Claire Mahaffey, E. Malcolm S. Woodward, and Mak A. Saito
Biogeosciences, 17, 2537–2551, https://doi.org/10.5194/bg-17-2537-2020, https://doi.org/10.5194/bg-17-2537-2020, 2020
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Trichodesmium is a globally important marine nitrogen fixer that stimulates primary production in the surface ocean. We surveyed metaproteomes of Trichodesmium populations across the North Atlantic and other oceans, and we found that they experience simultaneous phosphate and iron stress because of the biophysical limits of nutrient uptake. Importantly, nitrogenase was most abundant during co-stress, indicating the potential importance of this phenotype to global nitrogen and carbon cycling.
Carolin R. Löscher, Wiebke Mohr, Hermann W. Bange, and Donald E. Canfield
Biogeosciences, 17, 851–864, https://doi.org/10.5194/bg-17-851-2020, https://doi.org/10.5194/bg-17-851-2020, 2020
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Oxygen minimum zones (OMZs) are ocean areas severely depleted in oxygen as a result of physical, chemical, and biological processes. Biologically, organic material is produced in the sea surface and exported to deeper waters, where it respires. In the Bay of Bengal (BoB), an OMZ is present, but there are traces of oxygen left. Our study now suggests that this is because one key process, nitrogen fixation, is absent in the BoB, thus preventing primary production and consecutive respiration.
Liuqian Yu, Katja Fennel, Bin Wang, Arnaud Laurent, Keith R. Thompson, and Lynn K. Shay
Ocean Sci., 15, 1801–1814, https://doi.org/10.5194/os-15-1801-2019, https://doi.org/10.5194/os-15-1801-2019, 2019
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We present a first direct comparison of nonidentical versus identical twin approaches for an ocean data assimilation system. We show that the identical twin approach overestimates the value of assimilating satellite observations and undervalues the benefit of assimilating temperature and salinity profiles. Misleading assessments such as undervaluing the impact of observational assets are problematic and can lead to misguided decisions on balancing investments among different observing assets.
Craig Smeaton, Xingqian Cui, Thomas S. Bianchi, Alix G. Cage, John A. Howe, and William E. N. Austin
Biogeosciences Discuss., https://doi.org/10.5194/bg-2019-163, https://doi.org/10.5194/bg-2019-163, 2019
Publication in BG not foreseen
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The sediments in fjords are known to be important sites for locking carbon away for long periods of time (thousands of years) but the processes by which climate and human activity influence the development of these coastal carbon stores is poorly understood. A record of long-term sediment burial from a Scottish fjord allows us to investigate the role that humans and climate has played. The results indicate that both climate and humans have an impact on terrestrial ecosystems.
Katja Fennel, Simone Alin, Leticia Barbero, Wiley Evans, Timothée Bourgeois, Sarah Cooley, John Dunne, Richard A. Feely, Jose Martin Hernandez-Ayon, Xinping Hu, Steven Lohrenz, Frank Muller-Karger, Raymond Najjar, Lisa Robbins, Elizabeth Shadwick, Samantha Siedlecki, Nadja Steiner, Adrienne Sutton, Daniela Turk, Penny Vlahos, and Zhaohui Aleck Wang
Biogeosciences, 16, 1281–1304, https://doi.org/10.5194/bg-16-1281-2019, https://doi.org/10.5194/bg-16-1281-2019, 2019
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We review and synthesize available information on coastal ocean carbon fluxes around North America (NA). There is overwhelming evidence, compiled and discussed here, that the NA coastal margins act as a sink. Our synthesis shows the great diversity in processes driving carbon fluxes in different coastal regions, highlights remaining gaps in observations and models, and discusses current and anticipated future trends with respect to carbon fluxes and acidification.
Angela M. Kuhn, Katja Fennel, and Ilana Berman-Frank
Biogeosciences, 15, 7379–7401, https://doi.org/10.5194/bg-15-7379-2018, https://doi.org/10.5194/bg-15-7379-2018, 2018
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Recent studies demonstrate that marine N2 fixation can be carried out without light. However, direct measurements of N2 fixation in dark environments are relatively scarce. This study uses a model that represents biogeochemical cycles at a deep-ocean location in the Gulf of Aqaba (Red Sea). Different model versions are used to test assumptions about N2 fixers. Relaxing light limitation for marine N2 fixers improved the similarity between model results and observations of deep nitrate and oxygen.
Kathleen M. Munson, Carl H. Lamborg, Rene M. Boiteau, and Mak A. Saito
Biogeosciences, 15, 6451–6460, https://doi.org/10.5194/bg-15-6451-2018, https://doi.org/10.5194/bg-15-6451-2018, 2018
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Methylmercury accumulates in marine organisms and is produced by bacterial processes in sediment systems. To date, the contribution of these processes to the marine water column is poorly understood. We measured noncellular production and breakdown of methylmercury in equatorial Pacific waters. We observed enhanced production in filtered waters that suggests noncellular processes result in rapid mercury transformations and, in turn, control methylmercury concentrations in the open ocean.
Krysten Rutherford and Katja Fennel
Ocean Sci., 14, 1207–1221, https://doi.org/10.5194/os-14-1207-2018, https://doi.org/10.5194/os-14-1207-2018, 2018
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Using a regional model of the northwestern North Atlantic shelves, we calculate transport timescales and pathways in order to understand the transport processes that underlie the rapid oxygen loss, air–sea CO2 flux, and supply of plankton seed populations on the Scotian Shelf. Study results highlight the limited connectivity between the Scotian Shelf and adjacent slope waters; instead, the dominant southwestward currents bring Grand Banks and Gulf of St. Lawrence waters to the Scotian Shelf.
Sara J. Bender, Dawn M. Moran, Matthew R. McIlvin, Hong Zheng, John P. McCrow, Jonathan Badger, Giacomo R. DiTullio, Andrew E. Allen, and Mak A. Saito
Biogeosciences, 15, 4923–4942, https://doi.org/10.5194/bg-15-4923-2018, https://doi.org/10.5194/bg-15-4923-2018, 2018
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Phaeocystis antarctica is an important phytoplankter of the Antarctic coastal environment where it dominates the early season bloom after sea ice retreat. Iron nutrition was found to be an important factor that results in Phaeocystis colony formation and a large restructuring of the proteome, including changes associated with the flagellate to colonial transition and adaptive responses to iron scarcity. Analysis of Phaeocystis proteins from the Ross Sea revealed the presence of both cell types.
Katja Fennel and Arnaud Laurent
Biogeosciences, 15, 3121–3131, https://doi.org/10.5194/bg-15-3121-2018, https://doi.org/10.5194/bg-15-3121-2018, 2018
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Increasing human-derived nutrient inputs to coastal oceans lead to spreading dead zones around the world. Here a biogeochemical model for the northern Gulf of Mexico, where nutrients from the Mississippi River create the largest dead zone in North American coastal waters, is used for the first time to show the effects of single and dual nutrient reductions of nitrogen (N) and phosphorus (P). Significant reductions in N or N&P load would be required to significantly reduce hypoxia in this system.
Jonathan Lemay, Helmuth Thomas, Susanne E. Craig, William J. Burt, Katja Fennel, and Blair J. W. Greenan
Biogeosciences, 15, 2111–2123, https://doi.org/10.5194/bg-15-2111-2018, https://doi.org/10.5194/bg-15-2111-2018, 2018
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We report a detailed mechanistic investigation of the impact of Hurricane Arthur on the CO2 cycling on the Scotian Shelf. We can show that in contrast to common thinking, the deepening of the surface during the summer months can lead to increased CO2 uptake as carbon-poor waters from subsurface water are brought up to the surface. Only during prolonged storm events is the deepening of the mixed layer strong enough to bring the (expected) carbon-rich water to the surface.
Mak A. Saito, Abigail E. Noble, Nicholas Hawco, Benjamin S. Twining, Daniel C. Ohnemus, Seth G. John, Phoebe Lam, Tim M. Conway, Rod Johnson, Dawn Moran, and Matthew McIlvin
Biogeosciences, 14, 4637–4662, https://doi.org/10.5194/bg-14-4637-2017, https://doi.org/10.5194/bg-14-4637-2017, 2017
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Cobalt has the smallest oceanic inventory of all known inorganic micronutrients, and hence is particularly vulnerable to influence by internal oceanic processes. The stoichiometry of cobalt was studied in the North Atlantic, and interpreted with regard to the context of Redfield theory with a focus on biological uptake, scavenging, and the coupling between dissolved and particulate phases. The stoichiometry of cobalt accelerated towards the surface due to increased biological activity and use.
Abigail E. Noble, Daniel C. Ohnemus, Nicholas J. Hawco, Phoebe J. Lam, and Mak A. Saito
Biogeosciences, 14, 2715–2739, https://doi.org/10.5194/bg-14-2715-2017, https://doi.org/10.5194/bg-14-2715-2017, 2017
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This study examines sources and sinks of dissolved and labile cobalt in the North Atlantic Ocean. The North and South Atlantic are influenced differently by dust, coastal margin sources, biota, and suspended particles. Dissolved cobalt in both basins is driven by a coastal margin source, leading to large plumes emanating from the north and south African coasts. These plumes are comparable in size despite the high dust flux observed in the North Atlantic that is absent in the South Atlantic.
Shuichang Zhang, Xiaomei Wang, Huajian Wang, Emma U. Hammarlund, Jin Su, Yu Wang, and Donald E. Canfield
Biogeosciences, 14, 2133–2149, https://doi.org/10.5194/bg-14-2133-2017, https://doi.org/10.5194/bg-14-2133-2017, 2017
Julia M. Moriarty, Courtney K. Harris, Katja Fennel, Marjorie A. M. Friedrichs, Kehui Xu, and Christophe Rabouille
Biogeosciences, 14, 1919–1946, https://doi.org/10.5194/bg-14-1919-2017, https://doi.org/10.5194/bg-14-1919-2017, 2017
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In coastal aquatic environments, resuspension of sediment and organic material from the seabed into the overlying water can impact biogeochemistry. Here, we used a novel modeling approach to quantify this impact for the Rhône River delta. In the model, resuspension increased oxygen consumption during individual resuspension events, and when results were averaged over 2 months. This implies that observations and models that only represent calm conditions may underestimate net oxygen consumption.
Nicholas J. Hawco, Daniel C. Ohnemus, Joseph A. Resing, Benjamin S. Twining, and Mak A. Saito
Biogeosciences, 13, 5697–5717, https://doi.org/10.5194/bg-13-5697-2016, https://doi.org/10.5194/bg-13-5697-2016, 2016
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Cobalt is a scarce nutrient required by phytoplankton. We report more than 800 measurements of dissolved cobalt in the South Pacific Ocean, which show high cobalt concentrations in anoxic subsurface waters offshore of Peru. Coastal cobalt sources may be stronger under low oxygen and could fluctuate as climate change is expected to alter the extent of these low-oxygen regions.
Zuo Xue, Ruoying He, Katja Fennel, Wei-Jun Cai, Steven Lohrenz, Wei-Jen Huang, Hanqin Tian, Wei Ren, and Zhengchen Zang
Biogeosciences, 13, 4359–4377, https://doi.org/10.5194/bg-13-4359-2016, https://doi.org/10.5194/bg-13-4359-2016, 2016
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In this study we used a state-of-the-science coupled physical–biogeochemical model to simulate and examine temporal and spatial variability of sea surface CO2 concentration in the Gulf of Mexico. Our model revealed the Gulf was a net CO2 sink with a flux of 1.11 ± 0.84 × 1012 mol C yr−1. We also found that biological uptake was the primary driver making the Gulf an overall CO2 sink and that the carbon flux in the northern Gulf was very susceptible to changes in river inputs.
A. Laurent, K. Fennel, R. Wilson, J. Lehrter, and R. Devereux
Biogeosciences, 13, 77–94, https://doi.org/10.5194/bg-13-77-2016, https://doi.org/10.5194/bg-13-77-2016, 2016
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In low oxygen environments, the lack of oxygen influences sediment biogeochemistry and in turn sediment-water fluxes. These nonlinear interactions are often missing from biogeochemical circulation models because sediment models are computationally expensive. A method for parameterizing realistic sediment-water fluxes is presented and applied to the Mississippi River Dead Zone where high primary production, stimulated by excess nutrient loads, promotes low bottom water conditions in summer.
L. Yu, K. Fennel, A. Laurent, M. C. Murrell, and J. C. Lehrter
Biogeosciences, 12, 2063–2076, https://doi.org/10.5194/bg-12-2063-2015, https://doi.org/10.5194/bg-12-2063-2015, 2015
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Our study suggests that a combination of physical processes and sediment oxygen consumption determine the spatial extent and temporal dynamics of hypoxia on the Louisiana shelf. In summer, stratification isolates oxygen-rich surface waters from hypoxic bottom waters; oxygen outgasses to the atmosphere at this time. A large fraction of primary production occurs below the pycnocline in summer, but this primary production does not strongly affect the spatial extent of hypoxic bottom waters.
K.-K. Liu, C.-K. Kang, T. Kobari, H. Liu, C. Rabouille, and K. Fennel
Biogeosciences, 11, 7061–7075, https://doi.org/10.5194/bg-11-7061-2014, https://doi.org/10.5194/bg-11-7061-2014, 2014
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This paper provides background info on the East China Sea, Japan/East Sea and South China Sea and highlights major findings in the special issue on their biogeochemical conditions and ecosystem functions. The three seas are subject to strong impacts from human activities and/or climate forcing. Because these continental margins sustain arguably some of the most productive marine ecosystems in the world, changes in these stressed ecosystems may threaten the livelihood of a large human population.
Z. Xue, R. He, K. Fennel, W.-J. Cai, S. Lohrenz, and C. Hopkinson
Biogeosciences, 10, 7219–7234, https://doi.org/10.5194/bg-10-7219-2013, https://doi.org/10.5194/bg-10-7219-2013, 2013
W. J. Burt, H. Thomas, K. Fennel, and E. Horne
Biogeosciences, 10, 53–66, https://doi.org/10.5194/bg-10-53-2013, https://doi.org/10.5194/bg-10-53-2013, 2013
Related subject area
Biogeochemistry: Land - Sea Coupling
Atmospheric CO2 exchanges measured by eddy covariance over a temperate salt marsh and influence of environmental controlling factors
Characterization of the benthic biogeochemical dynamics after flood events in the Rhône River prodelta: a data–model approach
Recent inorganic carbon increase in a temperate estuary driven by water quality improvement and enhanced by droughts
Alkalinity and nitrate dynamics reveal dominance of anammox in a hyper-turbid estuary
Reconciling the paradox of soil organic carbon erosion by water
The dispersal of fluvially discharged and marine, shelf-produced particulate organic matter in the northern Gulf of Mexico
Carbon dynamics at the river–estuarine transition: a comparison among tributaries of Chesapeake Bay
From soil to sea: sources and transport of organic carbon traced by tetraether lipids in the monsoonal Godavari River, India
Dissolved organic matter characterization in soils and streams in a small coastal low-Arctic catchment
Regional-scale phytoplankton dynamics and their association with glacier meltwater runoff in Svalbard
Riverine nitrogen supply to the global ocean and its limited impact on global marine primary production: a feedback study using an Earth system model
Rain-fed streams dilute inorganic nutrients but subsidise organic-matter-associated nutrients in coastal waters of the northeast Pacific Ocean
Spatio-temporal variations in lateral and atmospheric carbon fluxes from the Danube Delta
Technical note: Seamless gas measurements across the land–ocean aquatic continuum – corrections and evaluation of sensor data for CO2, CH4 and O2 from field deployments in contrasting environments
Enrichment of trace metals from acid sulfate soils in sediments of the Kvarken Archipelago, eastern Gulf of Bothnia, Baltic Sea
Organic iron complexes enhance iron transport capacity along estuarine salinity gradients of Baltic estuaries
Particulate organic matter controls benthic microbial N retention and N removal in contrasting estuaries of the Baltic Sea
Export fluxes of dissolved inorganic carbon to the northern Indian Ocean from the Indian monsoonal rivers
The ballast effect of lithogenic matter and its influences on the carbon fluxes in the Indian Ocean
Integrating multimedia models to assess nitrogen losses from the Mississippi River basin to the Gulf of Mexico
Reconciling drainage and receiving basin signatures of the Godavari River system
Impacts of flocculation on the distribution and diagenesis of iron in boreal estuarine sediments
Sources, fluxes, and behaviors of fluorescent dissolved organic matter (FDOM) in the Nakdong River Estuary, Korea
Effects of changes in nutrient loading and composition on hypoxia dynamics and internal nutrient cycling of a stratified coastal lagoon
Carbon degradation in agricultural soils flooded with seawater after managed coastal realignment
A global hotspot for dissolved organic carbon in hypermaritime watersheds of coastal British Columbia
Nitrogen transformations along a shallow subterranean estuary
Modelling nutrient retention in the coastal zone of an eutrophic sea
Patterns and persistence of hydrologic carbon and nutrient export from collapsing upland permafrost
Modelling the impact of riverine DON removal by marine bacterioplankton on primary production in the Arctic Ocean
Seasonal response of air–water CO2 exchange along the land–ocean aquatic continuum of the northeast North American coast.
Quantification of iron-rich volcanogenic dust emissions and deposition over the ocean from Icelandic dust sources
Effects of seabird nitrogen input on biomass and carbon accumulation after 50 years of primary succession on a young volcanic island, Surtsey
Impact of river discharge, upwelling and vertical mixing on the nutrient loading and productivity of the Canadian Beaufort Shelf
Seasonal contribution of terrestrial organic matter and biological oxygen demand to the Baltic Sea from three contrasting river catchments
Antarctic ice sheet fertilises the Southern Ocean
Nutrient dynamics in tropical rivers, lagoons, and coastal ecosystems of eastern Hainan Island, South China Sea
Bioavailability of riverine dissolved organic matter in three Baltic Sea estuaries and the effect of catchment land use
Seasonal dissolved inorganic nitrogen and phosphorus budgets for two sub-tropical estuaries in south Florida, USA
Export of 134 Cs and 137 Cs in the Fukushima river systems at heavy rains by Typhoon Roke in September 2011
The fate of riverine nutrients on Arctic shelves
External forcings, oceanographic processes and particle flux dynamics in Cap de Creus submarine canyon, NW Mediterranean Sea
Radium-based estimates of cesium isotope transport and total direct ocean discharges from the Fukushima Nuclear Power Plant accident
Tracing inputs of terrestrial high molecular weight dissolved organic matter within the Baltic Sea ecosystem
The role of alkalinity generation in controlling the fluxes of CO2 during exposure and inundation on tidal flats
Coupling of fog and marine microbial content in the near-shore coastal environment
Spatialized N budgets in a large agricultural Mediterranean watershed: high loading and low transfer
Effects of water discharge and sediment load on evolution of modern Yellow River Delta, China, over the period from 1976 to 2009
Carbon isotopes and lipid biomarker investigation of sources, transport and degradation of terrestrial organic matter in the Buor-Khaya Bay, SE Laptev Sea
Contribution of riverine nutrients to the silicon biogeochemistry of the global ocean – a model study
Jérémy Mayen, Pierre Polsenaere, Éric Lamaud, Marie Arnaud, Pierre Kostyrka, Jean-Marc Bonnefond, Philippe Geairon, Julien Gernigon, Romain Chassagne, Thomas Lacoue-Labarthe, Aurore Regaudie de Gioux, and Philippe Souchu
Biogeosciences, 21, 993–1016, https://doi.org/10.5194/bg-21-993-2024, https://doi.org/10.5194/bg-21-993-2024, 2024
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We deployed an atmospheric eddy covariance system to measure continuously the net ecosystem CO2 exchanges (NEE) over a salt marsh and determine the major biophysical drivers. Our results showed an annual carbon sink mainly due to photosynthesis of the marsh plants. Our study also provides relevant information on NEE fluxes during marsh immersion by decreasing daytime CO2 uptake and night-time CO2 emissions at the daily scale, whereas the immersion did not affect the annual marsh C balance.
Eva Ferreira, Stanley Nmor, Eric Viollier, Bruno Lansard, Bruno Bombled, Edouard Regnier, Gaël Monvoisin, Christian Grenz, Pieter van Beek, and Christophe Rabouille
Biogeosciences, 21, 711–729, https://doi.org/10.5194/bg-21-711-2024, https://doi.org/10.5194/bg-21-711-2024, 2024
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The study provides new insights by examining the short-term impact of winter floods on biogeochemical sediment processes near the Rhône River (NW Mediterranean Sea). This is the first winter monitoring of sediment and porewater in deltaic areas. The coupling of these data with a new model enables us to quantify the evolution of biogeochemical processes. It also provides new perspectives on the benthic carbon cycle in river deltas considering climate change, whereby flooding should intensify.
Louise C. V. Rewrie, Burkard Baschek, Justus E. E. van Beusekom, Arne Körtzinger, Gregor Ollesch, and Yoana G. Voynova
Biogeosciences, 20, 4931–4947, https://doi.org/10.5194/bg-20-4931-2023, https://doi.org/10.5194/bg-20-4931-2023, 2023
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After heavy pollution in the 1980s, a long-term inorganic carbon increase in the Elbe Estuary (1997–2020) was fueled by phytoplankton and organic carbon production in the upper estuary, associated with improved water quality. A recent drought (2014–2020) modulated the trend, extending the water residence time and the dry summer season into May. The drought enhanced production of inorganic carbon in the estuary but significantly decreased the annual inorganic carbon export to coastal waters.
Mona Norbisrath, Andreas Neumann, Kirstin Dähnke, Tina Sanders, Andreas Schöl, Justus E. E. van Beusekom, and Helmuth Thomas
Biogeosciences, 20, 4307–4321, https://doi.org/10.5194/bg-20-4307-2023, https://doi.org/10.5194/bg-20-4307-2023, 2023
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Total alkalinity (TA) is the oceanic capacity to store CO2. Estuaries can be a TA source. Anaerobic metabolic pathways like denitrification (reduction of NO3− to N2) generate TA and are a major nitrogen (N) sink. Another important N sink is anammox that transforms NH4+ with NO2− into N2 without TA generation. By combining TA and N2 production, we identified a TA source, denitrification, occurring in the water column and suggest anammox as the dominant N2 producer in the bottom layer of the Ems.
Kristof Van Oost and Johan Six
Biogeosciences, 20, 635–646, https://doi.org/10.5194/bg-20-635-2023, https://doi.org/10.5194/bg-20-635-2023, 2023
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The direction and magnitude of the net erosion-induced land–atmosphere C exchange have been the topic of a big scientific debate for more than a decade now. Many have assumed that erosion leads to a loss of soil carbon to the atmosphere, whereas others have shown that erosion ultimately leads to a carbon sink. Here, we show that the soil carbon erosion source–sink paradox is reconciled when the broad range of temporal and spatial scales at which the underlying processes operate are considered.
Yord W. Yedema, Francesca Sangiorgi, Appy Sluijs, Jaap S. Sinninghe Damsté, and Francien Peterse
Biogeosciences, 20, 663–686, https://doi.org/10.5194/bg-20-663-2023, https://doi.org/10.5194/bg-20-663-2023, 2023
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Terrestrial organic matter (TerrOM) is transported to the ocean by rivers, where its burial can potentially form a long-term carbon sink. This burial is dependent on the type and characteristics of the TerrOM. We used bulk sediment properties, biomarkers, and palynology to identify the dispersal patterns of plant-derived, soil–microbial, and marine OM in the northern Gulf of Mexico and show that plant-derived OM is transported further into the coastal zone than soil and marine-produced TerrOM.
Paul A. Bukaveckas
Biogeosciences, 19, 4209–4226, https://doi.org/10.5194/bg-19-4209-2022, https://doi.org/10.5194/bg-19-4209-2022, 2022
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Inland waters play an important role in the global carbon cycle by storing, transforming and transporting carbon from land to sea. Comparatively little is known about carbon dynamics at the river–estuarine transition. A study of tributaries of Chesapeake Bay showed that biological processes exerted a strong effect on carbon transformations. Peak carbon retention occurred during periods of elevated river discharge and was associated with trapping of particulate matter.
Frédérique M. S. A. Kirkels, Huub M. Zwart, Muhammed O. Usman, Suning Hou, Camilo Ponton, Liviu Giosan, Timothy I. Eglinton, and Francien Peterse
Biogeosciences, 19, 3979–4010, https://doi.org/10.5194/bg-19-3979-2022, https://doi.org/10.5194/bg-19-3979-2022, 2022
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Soil organic carbon (SOC) that is transferred to the ocean by rivers forms a long-term sink of atmospheric CO2 upon burial on the ocean floor. We here test if certain bacterial membrane lipids can be used to trace SOC through the monsoon-fed Godavari River basin in India. We find that these lipids trace the mobilisation and transport of SOC in the wet season but that these lipids are not transferred far into the sea. This suggests that the burial of SOC on the sea floor is limited here.
Niek Jesse Speetjens, George Tanski, Victoria Martin, Julia Wagner, Andreas Richter, Gustaf Hugelius, Chris Boucher, Rachele Lodi, Christian Knoblauch, Boris P. Koch, Urban Wünsch, Hugues Lantuit, and Jorien E. Vonk
Biogeosciences, 19, 3073–3097, https://doi.org/10.5194/bg-19-3073-2022, https://doi.org/10.5194/bg-19-3073-2022, 2022
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Climate change and warming in the Arctic exceed global averages. As a result, permanently frozen soils (permafrost) which store vast quantities of carbon in the form of dead plant material (organic matter) are thawing. Our study shows that as permafrost landscapes degrade, high concentrations of organic matter are released. Partly, this organic matter is degraded rapidly upon release, while another significant fraction enters stream networks and enters the Arctic Ocean.
Thorben Dunse, Kaixing Dong, Kjetil Schanke Aas, and Leif Christian Stige
Biogeosciences, 19, 271–294, https://doi.org/10.5194/bg-19-271-2022, https://doi.org/10.5194/bg-19-271-2022, 2022
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We investigate the effect of glacier meltwater on phytoplankton dynamics in Svalbard. Phytoplankton forms the basis of the marine food web, and its seasonal dynamics depend on the availability of light and nutrients, both of which are affected by glacier runoff. We use satellite ocean color, an indicator of phytoplankton biomass, and glacier mass balance modeling to find that the overall effect of glacier runoff on marine productivity is positive within the major fjord systems of Svalbard.
Miriam Tivig, David P. Keller, and Andreas Oschlies
Biogeosciences, 18, 5327–5350, https://doi.org/10.5194/bg-18-5327-2021, https://doi.org/10.5194/bg-18-5327-2021, 2021
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Nitrogen is one of the most important elements for life in the ocean. A major source is the riverine discharge of dissolved nitrogen. While global models often omit rivers as a nutrient source, we included nitrogen from rivers in our Earth system model and found that additional nitrogen affected marine biology not only locally but also in regions far off the coast. Depending on regional conditions, primary production was enhanced or even decreased due to internal feedbacks in the nitrogen cycle.
Kyra A. St. Pierre, Brian P. V. Hunt, Suzanne E. Tank, Ian Giesbrecht, Maartje C. Korver, William C. Floyd, Allison A. Oliver, and Kenneth P. Lertzman
Biogeosciences, 18, 3029–3052, https://doi.org/10.5194/bg-18-3029-2021, https://doi.org/10.5194/bg-18-3029-2021, 2021
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Using 4 years of paired freshwater and marine water chemistry from the Central Coast of British Columbia (Canada), we show that coastal temperate rainforest streams are sources of organic nitrogen, iron, and carbon to the Pacific Ocean but not the inorganic nutrients easily used by marine phytoplankton. This distinction may have important implications for coastal food webs and highlights the need to sample all nutrients in fresh and marine waters year-round to fully understand coastal dynamics.
Marie-Sophie Maier, Cristian R. Teodoru, and Bernhard Wehrli
Biogeosciences, 18, 1417–1437, https://doi.org/10.5194/bg-18-1417-2021, https://doi.org/10.5194/bg-18-1417-2021, 2021
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Based on a 2-year monitoring study, we found that the freshwater system of the Danube Delta, Romania, releases carbon dioxide and methane to the atmosphere. The amount of carbon released depends on the freshwater feature (river branches, channels and lakes), season and hydrologic condition, affecting the exchange with the wetland. Spatial upscaling should therefore consider these factors. Furthermore, the Danube Delta increases the amount of carbon reaching the Black Sea via the Danube River.
Anna Rose Canning, Peer Fietzek, Gregor Rehder, and Arne Körtzinger
Biogeosciences, 18, 1351–1373, https://doi.org/10.5194/bg-18-1351-2021, https://doi.org/10.5194/bg-18-1351-2021, 2021
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The paper describes a novel, fully autonomous, multi-gas flow-through set-up for multiple gases that combines established, high-quality oceanographic sensors in a small and robust system designed for use across all salinities and all types of platforms. We describe the system and its performance in all relevant detail, including the corrections which improve the accuracy of these sensors, and illustrate how simultaneous multi-gas set-ups can provide an extremely high spatiotemporal resolution.
Joonas J. Virtasalo, Peter Österholm, Aarno T. Kotilainen, and Mats E. Åström
Biogeosciences, 17, 6097–6113, https://doi.org/10.5194/bg-17-6097-2020, https://doi.org/10.5194/bg-17-6097-2020, 2020
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Rivers draining the acid sulphate soils of western Finland deliver large amounts of metals (e.g. Cd, Co, Cu, La, Mn, Ni, and Zn) to the coastal sea. To better understand metal enrichment in the sea floor, we analysed metal contents and grain size distribution in nine sediment cores, which increased in the 1960s and 1970s and stayed at high levels afterwards. The enrichment is visible more than 25 km out from the river mouths. Organic aggregates are suggested as the key seaward metal carriers.
Simon David Herzog, Per Persson, Kristina Kvashnina, and Emma Sofia Kritzberg
Biogeosciences, 17, 331–344, https://doi.org/10.5194/bg-17-331-2020, https://doi.org/10.5194/bg-17-331-2020, 2020
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Fe concentrations in boreal rivers are increasing strongly in several regions in Northern Europe. This study focuses on how Fe speciation and interaction with organic matter affect stability of Fe across estuarine salinity gradients. The results confirm a positive relationship between the relative contribution of organically complexed Fe and stability. Moreover, organically complexed Fe was more prevalent at high flow conditions and more dominant further upstream in a catchment.
Ines Bartl, Dana Hellemann, Christophe Rabouille, Kirstin Schulz, Petra Tallberg, Susanna Hietanen, and Maren Voss
Biogeosciences, 16, 3543–3564, https://doi.org/10.5194/bg-16-3543-2019, https://doi.org/10.5194/bg-16-3543-2019, 2019
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Irrespective of variable environmental settings in estuaries, the quality of organic particles is an important factor controlling microbial processes that facilitate a reduction of land-derived nitrogen loads to the open sea. Through the interplay of biogeochemical processing, geomorphology, and hydrodynamics, organic particles may function as a carrier and temporary reservoir of nitrogen, which has a major impact on the efficiency of nitrogen load reduction.
Moturi S. Krishna, Rongali Viswanadham, Mamidala H. K. Prasad, Vuravakonda R. Kumari, and Vedula V. S. S. Sarma
Biogeosciences, 16, 505–519, https://doi.org/10.5194/bg-16-505-2019, https://doi.org/10.5194/bg-16-505-2019, 2019
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An order-of-magnitude variability in DIC was found within the Indian estuaries due to significant variability in size of rivers, precipitation pattern and lithology in the catchments. Indian monsoonal estuaries annually export ∼ 10.3 Tg of DIC to the northern Indian Ocean, of which 75 % enters into the Bay of Bengal. Our results indicated that chemical weathering of carbonate and silicate minerals by soil CO2 is the major source of DIC in the Indian monsoonal rivers.
Tim Rixen, Birgit Gaye, Kay-Christian Emeis, and Venkitasubramani Ramaswamy
Biogeosciences, 16, 485–503, https://doi.org/10.5194/bg-16-485-2019, https://doi.org/10.5194/bg-16-485-2019, 2019
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Data obtained from sediment trap experiments in the Indian Ocean indicate that lithogenic matter ballast increases organic carbon flux rates on average by 45 % and by up to 62 % at trap locations in the river-influenced regions of the Indian Ocean. Such a strong lithogenic matter ballast effect implies that land use changes and the associated enhanced transport of lithogenic matter may significantly affect the CO2 uptake of the organic carbon pump in the receiving ocean areas.
Yongping Yuan, Ruoyu Wang, Ellen Cooter, Limei Ran, Prasad Daggupati, Dongmei Yang, Raghavan Srinivasan, and Anna Jalowska
Biogeosciences, 15, 7059–7076, https://doi.org/10.5194/bg-15-7059-2018, https://doi.org/10.5194/bg-15-7059-2018, 2018
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Elevated levels of nutrients in surface water, which originate from deposition of atmospheric N, drainage from agricultural fields, and discharges from sewage treatment plants, cause explosive algal blooms that impair water quality. The complex cycling of nutrients through the land, air, and water requires an integrated multimedia modeling system linking air, land surface, and stream processes to assess their sources, transport, and transformation in large river basins for decision making.
Muhammed Ojoshogu Usman, Frédérique Marie Sophie Anne Kirkels, Huub Michel Zwart, Sayak Basu, Camilo Ponton, Thomas Michael Blattmann, Michael Ploetze, Negar Haghipour, Cameron McIntyre, Francien Peterse, Maarten Lupker, Liviu Giosan, and Timothy Ian Eglinton
Biogeosciences, 15, 3357–3375, https://doi.org/10.5194/bg-15-3357-2018, https://doi.org/10.5194/bg-15-3357-2018, 2018
Tom Jilbert, Eero Asmala, Christian Schröder, Rosa Tiihonen, Jukka-Pekka Myllykangas, Joonas J. Virtasalo, Aarno Kotilainen, Pasi Peltola, Päivi Ekholm, and Susanna Hietanen
Biogeosciences, 15, 1243–1271, https://doi.org/10.5194/bg-15-1243-2018, https://doi.org/10.5194/bg-15-1243-2018, 2018
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Iron is a common dissolved element in river water, recognizable by its orange-brown colour. Here we show that when rivers reach the ocean much of this iron settles to the sediments by a process known as flocculation. The iron is then used by microbes in coastal sediments, which are important hotspots in the global carbon cycle.
Shin-Ah Lee and Guebuem Kim
Biogeosciences, 15, 1115–1122, https://doi.org/10.5194/bg-15-1115-2018, https://doi.org/10.5194/bg-15-1115-2018, 2018
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The fluorescent dissolved organic matter (FDOM) delivered from riverine discharges significantly affects carbon and biogeochemical cycles in coastal waters. Our results show that the terrestrial concentrations of humic-like FDOM in river water were 60–80 % higher in the summer and fall, while the in situ production of protein-like FDOM was 70–80 % higher in the spring. Our results suggest that there are large seasonal changes in riverine fluxes of FDOM components to the ocean.
Yafei Zhu, Andrew McCowan, and Perran L. M. Cook
Biogeosciences, 14, 4423–4433, https://doi.org/10.5194/bg-14-4423-2017, https://doi.org/10.5194/bg-14-4423-2017, 2017
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We used a 3-D coupled hydrodynamic–biogeochemical water quality model to investigate the effects of changes in catchment nutrient loading and composition on the phytoplankton dynamics, development of hypoxia and internal nutrient dynamics in a stratified coastal lagoon system. The results highlighted the need to reduce both total nitrogen and total phosphorus for water quality improvement in estuarine systems.
Kamilla S. Sjøgaard, Alexander H. Treusch, and Thomas B. Valdemarsen
Biogeosciences, 14, 4375–4389, https://doi.org/10.5194/bg-14-4375-2017, https://doi.org/10.5194/bg-14-4375-2017, 2017
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Permanent flooding of low-lying coastal areas is a growing threat due to climate-change-related sea-level rise. To reduce coastal damage, buffer zones can be created by managed coastal realignment where existing dykes are breached and new dykes are built further inland. We studied the impacts on organic matter degradation in soils flooded with seawater by managed coastal realignment and suggest that most of the organic carbon present in coastal soils will be permanently preserved after flooding.
Allison A. Oliver, Suzanne E. Tank, Ian Giesbrecht, Maartje C. Korver, William C. Floyd, Paul Sanborn, Chuck Bulmer, and Ken P. Lertzman
Biogeosciences, 14, 3743–3762, https://doi.org/10.5194/bg-14-3743-2017, https://doi.org/10.5194/bg-14-3743-2017, 2017
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Rivers draining small watersheds of the outer coastal Pacific temperate rainforest export some of the highest yields of dissolved organic carbon (DOC) in the world directly to the ocean. This DOC is largely derived from soils and terrestrial plants. Rainfall, temperature, and watershed characteristics such as wetlands and lakes are important controls on DOC export. This region may be significant for carbon export and linking terrestrial carbon to marine ecosystems.
Mathilde Couturier, Gwendoline Tommi-Morin, Maude Sirois, Alexandra Rao, Christian Nozais, and Gwénaëlle Chaillou
Biogeosciences, 14, 3321–3336, https://doi.org/10.5194/bg-14-3321-2017, https://doi.org/10.5194/bg-14-3321-2017, 2017
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At the land–ocean interface, subterranean estuaries (STEs) are a critical transition pathway of nitrogen. Environmental conditions in the groundwater lead to nitrogen transformation, altering the nitrogen species and concentrations exported to the coastal ocean. This study highlights the role of a STE in processing groundwater-derived N in a shallow boreal STE, far from anthropogenic pressures. Biogeochemical transformations provide new N species from terrestrial origin to the coastal ocean.
Elin Almroth-Rosell, Moa Edman, Kari Eilola, H. E. Markus Meier, and Jörgen Sahlberg
Biogeosciences, 13, 5753–5769, https://doi.org/10.5194/bg-13-5753-2016, https://doi.org/10.5194/bg-13-5753-2016, 2016
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Nutrients from land have been discussed to increase eutrophication in the open sea. This model study shows that the coastal zone works as an efficient filter. Water depth and residence time regulate the retention that occurs mostly in the sediment due to processes such as burial and denitrification. On shorter timescales the retention capacity might seem less effective when the land load of nutrients decreases, but with time the coastal zone can import nutrients from the open sea.
B. W. Abbott, J. B. Jones, S. E. Godsey, J. R. Larouche, and W. B. Bowden
Biogeosciences, 12, 3725–3740, https://doi.org/10.5194/bg-12-3725-2015, https://doi.org/10.5194/bg-12-3725-2015, 2015
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As high latitudes warm, carbon and nitrogen stored in permafrost soil will be vulnerable to erosion and transport to Arctic streams and rivers. We sampled outflow from 83 permafrost collapse features in Alaska. Permafrost collapse caused substantial increases in dissolved organic carbon and inorganic nitrogen but decreased methane concentration by 90%. Upland thermokarst may be a dominant linkage transferring carbon and nutrients from terrestrial to aquatic ecosystems as the Arctic warms.
V. Le Fouest, M. Manizza, B. Tremblay, and M. Babin
Biogeosciences, 12, 3385–3402, https://doi.org/10.5194/bg-12-3385-2015, https://doi.org/10.5194/bg-12-3385-2015, 2015
G. G. Laruelle, R. Lauerwald, J. Rotschi, P. A. Raymond, J. Hartmann, and P. Regnier
Biogeosciences, 12, 1447–1458, https://doi.org/10.5194/bg-12-1447-2015, https://doi.org/10.5194/bg-12-1447-2015, 2015
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This study quantifies the exchange of carbon dioxide (CO2) between the atmosphere and the land-ocean aquatic continuum (LOAC) of the northeast North American coast, which consists of rivers, estuaries, and the coastal ocean. Our analysis reveals significant variations of the flux intensity both in time and space across the study area. Ice cover, snowmelt, and the intensity of the estuarine filter are identified as important control factors of the CO2 exchange along the LOAC.
O. Arnalds, H. Olafsson, and P. Dagsson-Waldhauserova
Biogeosciences, 11, 6623–6632, https://doi.org/10.5194/bg-11-6623-2014, https://doi.org/10.5194/bg-11-6623-2014, 2014
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Iceland is one of the largest dust sources on Earth. Based on two separate methods, we estimate dust emissions to range between 30 and 40 million tons annually. Ocean deposition ranges between 5.5 and 13.8 million tons. Calculated iron deposition in oceans around Iceland ranges between 0.56 to 1.4 million tons, which are distributed over wide areas. Iron is a limiting nutrient for primary production in these waters, and dust is likely to affect oceanic Fe levels around Iceland.
N. I. W. Leblans, B. D. Sigurdsson, P. Roefs, R. Thuys, B. Magnússon, and I. A. Janssens
Biogeosciences, 11, 6237–6250, https://doi.org/10.5194/bg-11-6237-2014, https://doi.org/10.5194/bg-11-6237-2014, 2014
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We studied the influence of allochthonous N inputs on primary succession and soil development of a 50-year-old volcanic island, Surtsey. Seabirds increased the ecosystem N accumulation rate inside their colony to ~47 kg ha-1 y-1, compared to 0.7 kg ha-1 y-1 outside it. A strong relationship was found between total ecosystem N stock and both total above- and belowground biomass and SOC stock, which shows how fast external N input can boost primary succession and soil formation.
J.-É. Tremblay, P. Raimbault, N. Garcia, B. Lansard, M. Babin, and J. Gagnon
Biogeosciences, 11, 4853–4868, https://doi.org/10.5194/bg-11-4853-2014, https://doi.org/10.5194/bg-11-4853-2014, 2014
H. E. Reader, C. A. Stedmon, and E. S. Kritzberg
Biogeosciences, 11, 3409–3419, https://doi.org/10.5194/bg-11-3409-2014, https://doi.org/10.5194/bg-11-3409-2014, 2014
R. Death, J. L. Wadham, F. Monteiro, A. M. Le Brocq, M. Tranter, A. Ridgwell, S. Dutkiewicz, and R. Raiswell
Biogeosciences, 11, 2635–2643, https://doi.org/10.5194/bg-11-2635-2014, https://doi.org/10.5194/bg-11-2635-2014, 2014
R. H. Li, S. M. Liu, Y. W. Li, G. L. Zhang, J. L. Ren, and J. Zhang
Biogeosciences, 11, 481–506, https://doi.org/10.5194/bg-11-481-2014, https://doi.org/10.5194/bg-11-481-2014, 2014
E. Asmala, R. Autio, H. Kaartokallio, L. Pitkänen, C. A. Stedmon, and D. N. Thomas
Biogeosciences, 10, 6969–6986, https://doi.org/10.5194/bg-10-6969-2013, https://doi.org/10.5194/bg-10-6969-2013, 2013
C. Buzzelli, Y. Wan, P. H. Doering, and J. N. Boyer
Biogeosciences, 10, 6721–6736, https://doi.org/10.5194/bg-10-6721-2013, https://doi.org/10.5194/bg-10-6721-2013, 2013
S. Nagao, M. Kanamori, S. Ochiai, S. Tomihara, K. Fukushi, and M. Yamamoto
Biogeosciences, 10, 6215–6223, https://doi.org/10.5194/bg-10-6215-2013, https://doi.org/10.5194/bg-10-6215-2013, 2013
V. Le Fouest, M. Babin, and J.-É. Tremblay
Biogeosciences, 10, 3661–3677, https://doi.org/10.5194/bg-10-3661-2013, https://doi.org/10.5194/bg-10-3661-2013, 2013
A. Rumín-Caparrós, A. Sanchez-Vidal, A. Calafat, M. Canals, J. Martín, P. Puig, and R. Pedrosa-Pàmies
Biogeosciences, 10, 3493–3505, https://doi.org/10.5194/bg-10-3493-2013, https://doi.org/10.5194/bg-10-3493-2013, 2013
M. A. Charette, C. F. Breier, P. B. Henderson, S. M. Pike, I. I. Rypina, S. R. Jayne, and K. O. Buesseler
Biogeosciences, 10, 2159–2167, https://doi.org/10.5194/bg-10-2159-2013, https://doi.org/10.5194/bg-10-2159-2013, 2013
B. Deutsch, V. Alling, C. Humborg, F. Korth, and C. M. Mörth
Biogeosciences, 9, 4465–4475, https://doi.org/10.5194/bg-9-4465-2012, https://doi.org/10.5194/bg-9-4465-2012, 2012
P. A. Faber, A. J. Kessler, J. K. Bull, I. D. McKelvie, F. J. R. Meysman, and P. L. M. Cook
Biogeosciences, 9, 4087–4097, https://doi.org/10.5194/bg-9-4087-2012, https://doi.org/10.5194/bg-9-4087-2012, 2012
M. E. Dueker, G. D. O'Mullan, K. C. Weathers, A. R. Juhl, and M. Uriarte
Biogeosciences, 9, 803–813, https://doi.org/10.5194/bg-9-803-2012, https://doi.org/10.5194/bg-9-803-2012, 2012
L. Lassaletta, E. Romero, G. Billen, J. Garnier, H. García-Gómez, and J. V. Rovira
Biogeosciences, 9, 57–70, https://doi.org/10.5194/bg-9-57-2012, https://doi.org/10.5194/bg-9-57-2012, 2012
J. Yu, Y. Fu, Y. Li, G. Han, Y. Wang, D. Zhou, W. Sun, Y. Gao, and F. X. Meixner
Biogeosciences, 8, 2427–2435, https://doi.org/10.5194/bg-8-2427-2011, https://doi.org/10.5194/bg-8-2427-2011, 2011
E. S. Karlsson, A. Charkin, O. Dudarev, I. Semiletov, J. E. Vonk, L. Sánchez-García, A. Andersson, and Ö. Gustafsson
Biogeosciences, 8, 1865–1879, https://doi.org/10.5194/bg-8-1865-2011, https://doi.org/10.5194/bg-8-1865-2011, 2011
C. Y. Bernard, H. H. Dürr, C. Heinze, J. Segschneider, and E. Maier-Reimer
Biogeosciences, 8, 551–564, https://doi.org/10.5194/bg-8-551-2011, https://doi.org/10.5194/bg-8-551-2011, 2011
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Short summary
Better development of interdisciplinary ties between biology, geology, and chemistry advances biogeochemistry through (1) better integration of contemporary (or rapid) evolutionary adaptation to predict changing biogeochemical cycles and (2) universal integration of data from long-term monitoring sites in terrestrial, aquatic, and human systems that span broad geographical regions for use in modeling.
Better development of interdisciplinary ties between biology, geology, and chemistry advances...
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