Articles | Volume 19, issue 1
https://doi.org/10.5194/bg-19-223-2022
© Author(s) 2022. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/bg-19-223-2022
© Author(s) 2022. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Research article
| 
14 Jan 2022
Research article |
| 14 Jan 2022
Climate pathways behind phytoplankton-induced atmospheric warming
Institute for Marine Ecosystem and Fishery Science, Center for Earth System Research and Sustainability, University of Hamburg, Hamburg, Germany
now at: Ifremer, University of Brest, CNRS, IRD, Laboratoire d'Océanographie Physique et Spatiale (LOPS), UMR6523, Centre de Bretagne, 29280 Plouzané, France
Frank Lunkeit
Meteorological Institute, Center for Earth System Research and Sustainability, University of Hamburg, Hamburg, Germany
Philip B. Holden
Environment, Earth and Ecosystems, The Open University, Walton Hall, Milton Keynes, MK7 6AA, UK
Inga Hense
Institute for Marine Ecosystem and Fishery Science, Center for Earth System Research and Sustainability, University of Hamburg, Hamburg, Germany
Related authors
Rémy Asselot, Frank Lunkeit, Philip Holden, and Inga Hense
Earth Syst. Dynam. Discuss., https://doi.org/10.5194/esd-2021-91, https://doi.org/10.5194/esd-2021-91, 2021
Revised manuscript not accepted
Short summary
Short summary
Phytoplankton absorbing light can influence the climate system but its future effect on the climate is still unclear. We use a climate model to investigate the role of phytoplankton light absorption under global warming. We find out that the effect of phytoplankton light absorption is smaller under a high greenhouse gas emissions compared to reduced and intermediate greenhouse gas emissions. Additionally, we show that phytoplankton light absorption is an important mechanism for the carbon cycle.
Peng Sun, Philip B. Holden, and H. John B. Birks
Clim. Past Discuss., https://doi.org/10.5194/cp-2023-69, https://doi.org/10.5194/cp-2023-69, 2023
Preprint under review for CP
Short summary
Short summary
We develop the Multi Ensemble Machine Learning Model MEMLM for reconstructing palaeoenvironments from microfossil assemblages. The machine learning approaches, which include random tree and natural language processing techniques, substantially outperform classical approaches under cross-validation but they can catastrophically fail when applied to reconstruct past environments. Statistical significance testing is found sufficient to identify these unreliable reconstructions.
Rémy Asselot, Frank Lunkeit, Philip Holden, and Inga Hense
EGUsphere, https://doi.org/10.5194/egusphere-2023-921, https://doi.org/10.5194/egusphere-2023-921, 2023
Short summary
Short summary
Phytoplankton are tiny oceanic algae able to absorb the light penetrating the ocean. The light absorbs by these organisms is re-emitted as heat in the surrounding environment, a process commonly called phytoplankton light absorption (PLA). As a consequence, PLA increases the oceanic temperature. We studied this mechanism with a climate model under different climate scenarios. We show that phytoplankton light absorption is reduced under strong warming scenario, limiting oceanic warming.
Yuan-Bing Zhao, Nedjeljka Žagar, Frank Lunkeit, and Richard Blender
EGUsphere, https://doi.org/10.5194/egusphere-2023-917, https://doi.org/10.5194/egusphere-2023-917, 2023
Short summary
Short summary
Climate models suffer from sea surface temperature (SST) biases, greatly affecting climate prediction. In this study, we show that localized SST bias in the tropical Indian Ocean can cause biases in global circulation, especially at the planetary scales, which impact simulated variability. The spatial variability response can be attributed to bias amplitude or bias phase, depending on regimes and regions, whereas the temporal variability response is contingent upon the sign of the SST bias.
Iana Strigunova, Richard Blender, Frank Lunkeit, and Nedjeljka Žagar
Weather Clim. Dynam., 3, 1399–1414, https://doi.org/10.5194/wcd-3-1399-2022, https://doi.org/10.5194/wcd-3-1399-2022, 2022
Short summary
Short summary
We show that the Eurasian heat waves (HWs) have signatures in the global circulation. We present changes in the probability density functions (PDFs) of energy anomalies in the zonal-mean state and in the Rossby waves at different zonal scales in relation to the changes in intramonthly variability. The skewness of the PDF of planetary-scale Rossby waves is shown to increase during HWs, while their intramonthly variability is reduced, a process referred to as blocking.
Negar Vakilifard, Richard G. Williams, Philip B. Holden, Katherine Turner, Neil R. Edwards, and David J. Beerling
Biogeosciences, 19, 4249–4265, https://doi.org/10.5194/bg-19-4249-2022, https://doi.org/10.5194/bg-19-4249-2022, 2022
Short summary
Short summary
To remain within the Paris climate agreement, there is an increasing need to develop and implement carbon capture and sequestration techniques. The global climate benefits of implementing negative emission technologies over the next century are assessed using an Earth system model covering a wide range of plausible climate states. In some model realisations, there is continued warming after emissions cease. This continued warming is avoided if negative emissions are incorporated.
Miriam D'Errico, Flavio Pons, Pascal Yiou, Soulivanh Tao, Cesare Nardini, Frank Lunkeit, and Davide Faranda
Earth Syst. Dynam., 13, 961–992, https://doi.org/10.5194/esd-13-961-2022, https://doi.org/10.5194/esd-13-961-2022, 2022
Short summary
Short summary
Climate change is already affecting weather extremes. In a warming climate, we will expect the cold spells to decrease in frequency and intensity. Our analysis shows that the frequency of circulation patterns leading to snowy cold-spell events over Italy will not decrease under business-as-usual emission scenarios, although the associated events may not lead to cold conditions in the warmer scenarios.
Maike Iris Esther Scheffold and Inga Hense
Ocean Sci., 18, 437–454, https://doi.org/10.5194/os-18-437-2022, https://doi.org/10.5194/os-18-437-2022, 2022
Short summary
Short summary
Organic carbon in the oceans can take various paths: it may e.g. sink to the sediment, be eaten, or be recycled to start all over again. Where carbon ends up for how long has implications for atmospheric CO2 concentrations and our climate. To assess which pathways exist and how they are structured, we introduce a qualitative concept of organic carbon pathways. This concept helps to identify pathways, compare ecosystems, and assess how human actions and environmental changes alter pathways.
Jenny Hieronymus, Kari Eilola, Malin Olofsson, Inga Hense, H. E. Markus Meier, and Elin Almroth-Rosell
Biogeosciences, 18, 6213–6227, https://doi.org/10.5194/bg-18-6213-2021, https://doi.org/10.5194/bg-18-6213-2021, 2021
Short summary
Short summary
Dense blooms of cyanobacteria occur every summer in the Baltic Proper and can add to eutrophication by their ability to turn nitrogen gas into dissolved inorganic nitrogen. Being able to correctly estimate the size of this nitrogen fixation is important for management purposes. In this work, we find that the life cycle of cyanobacteria plays an important role in capturing the seasonality of the blooms as well as the size of nitrogen fixation in our ocean model.
Rémy Asselot, Frank Lunkeit, Philip Holden, and Inga Hense
Earth Syst. Dynam. Discuss., https://doi.org/10.5194/esd-2021-91, https://doi.org/10.5194/esd-2021-91, 2021
Revised manuscript not accepted
Short summary
Short summary
Phytoplankton absorbing light can influence the climate system but its future effect on the climate is still unclear. We use a climate model to investigate the role of phytoplankton light absorption under global warming. We find out that the effect of phytoplankton light absorption is smaller under a high greenhouse gas emissions compared to reduced and intermediate greenhouse gas emissions. Additionally, we show that phytoplankton light absorption is an important mechanism for the carbon cycle.
Félix Pellerin, Philipp Porada, and Inga Hense
Earth Syst. Dynam. Discuss., https://doi.org/10.5194/esd-2020-55, https://doi.org/10.5194/esd-2020-55, 2020
Revised manuscript not accepted
Short summary
Short summary
While several biological processes are similar among terrestrial and marine ecosystems, their representation in Earth System Models may differ. By comparing the terrestrial and marine modules of 17 Earth System Models, we found multiple evidences of unjustified differences in processes representation. These inconsistencies may lead to wrong predictions about the role of biosphere in the climate system and skew our perception of the relative influence of each ecosystem on climate.
Andrew H. MacDougall, Thomas L. Frölicher, Chris D. Jones, Joeri Rogelj, H. Damon Matthews, Kirsten Zickfeld, Vivek K. Arora, Noah J. Barrett, Victor Brovkin, Friedrich A. Burger, Micheal Eby, Alexey V. Eliseev, Tomohiro Hajima, Philip B. Holden, Aurich Jeltsch-Thömmes, Charles Koven, Nadine Mengis, Laurie Menviel, Martine Michou, Igor I. Mokhov, Akira Oka, Jörg Schwinger, Roland Séférian, Gary Shaffer, Andrei Sokolov, Kaoru Tachiiri, Jerry Tjiputra, Andrew Wiltshire, and Tilo Ziehn
Biogeosciences, 17, 2987–3016, https://doi.org/10.5194/bg-17-2987-2020, https://doi.org/10.5194/bg-17-2987-2020, 2020
Short summary
Short summary
The Zero Emissions Commitment (ZEC) is the change in global temperature expected to occur following the complete cessation of CO2 emissions. Here we use 18 climate models to assess the value of ZEC. For our experiment we find that ZEC 50 years after emissions cease is between −0.36 to +0.29 °C. The most likely value of ZEC is assessed to be close to zero. However, substantial continued warming for decades or centuries following cessation of CO2 emission cannot be ruled out.
Andreas Wernecke, Tamsin L. Edwards, Isabel J. Nias, Philip B. Holden, and Neil R. Edwards
The Cryosphere, 14, 1459–1474, https://doi.org/10.5194/tc-14-1459-2020, https://doi.org/10.5194/tc-14-1459-2020, 2020
Short summary
Short summary
We investigate how the two-dimensional characteristics of ice thickness change from satellite measurements can be used to judge and refine a high-resolution ice sheet model of Antarctica. The uncertainty in 50-year model simulations for the currently most drastically changing part of Antarctica can be reduced by nearly 40 % compared to a simpler, non-spatial approach and nearly 90 % compared to the original spread in simulations.
Philip B. Holden, Neil R. Edwards, Thiago F. Rangel, Elisa B. Pereira, Giang T. Tran, and Richard D. Wilkinson
Geosci. Model Dev., 12, 5137–5155, https://doi.org/10.5194/gmd-12-5137-2019, https://doi.org/10.5194/gmd-12-5137-2019, 2019
Short summary
Short summary
We describe the development of the Paleoclimate PLASIM-GENIE emulator and its application to derive a high-resolution spatio-temporal description of the climate of the last 5 x 106 years. Spatial fields of bioclimatic variables are emulated at 1000-year intervals, driven by time series of scalar boundary-condition forcing (CO2, orbit, and ice volume). Emulated anomalies are interpolated into modern climatology to produce a high-resolution climate reconstruction of the Pliocene–Pleistocene.
Valerio Lembo, Frank Lunkeit, and Valerio Lucarini
Geosci. Model Dev., 12, 3805–3834, https://doi.org/10.5194/gmd-12-3805-2019, https://doi.org/10.5194/gmd-12-3805-2019, 2019
Short summary
Short summary
The Thermodynamic Diagnostic Tool (TheDiaTo v1.0) is a collection of diagnostics for the study of the thermodynamics of the climate system in climate models. This is fundamental in order to understand where the imbalances affecting climate projections come from and also to allow for easy comparison of different scenarios and atmospheric regimes. The tool is currently being developed for the assessment of models that are part of the next phase of the Coupled Model Intercomparison Project (CMIP).
Jamie D. Wilson, Stephen Barker, Neil R. Edwards, Philip B. Holden, and Andy Ridgwell
Biogeosciences, 16, 2923–2936, https://doi.org/10.5194/bg-16-2923-2019, https://doi.org/10.5194/bg-16-2923-2019, 2019
Short summary
Short summary
The remains of plankton rain down from the surface ocean to the deep ocean, acting to store CO2 in the deep ocean. We used a model of biology and ocean circulation to explore the importance of this process in different regions of the ocean. The amount of CO2 stored in the deep ocean is most sensitive to changes in the Southern Ocean. As plankton in the Southern Ocean are likely those most impacted by future climate change, the amount of CO2 they store in the deep ocean could also be affected.
Krista M. S. Kemppinen, Philip B. Holden, Neil R. Edwards, Andy Ridgwell, and Andrew D. Friend
Clim. Past, 15, 1039–1062, https://doi.org/10.5194/cp-15-1039-2019, https://doi.org/10.5194/cp-15-1039-2019, 2019
Short summary
Short summary
We simulate the Last Glacial Maximum atmospheric CO2 decrease with a large ensemble of parameter sets to investigate the range of possible physical and biogeochemical Earth system changes accompanying the CO2 decrease. Amongst the dominant ensemble changes is an increase in terrestrial carbon, which we attribute to a slower soil respiration rate, and the preservation of carbon by the LGM ice sheets. Further investigation into the role of terrestrial carbon is warranted.
Tamás Bódai, Valerio Lucarini, and Frank Lunkeit
Earth Syst. Dynam. Discuss., https://doi.org/10.5194/esd-2018-30, https://doi.org/10.5194/esd-2018-30, 2018
Revised manuscript not accepted
Short summary
Short summary
We establish a framework to conduct a scenario analysis of the best possible outcomes under geoengineering. The scenarios may consist of scenarios of greenhouse gas emission the choice of the quantity that we want to keep under control. The motivation is the desire of an efficient way of assessing the side-effects of geoengineering, concerning the unwanted and uncontrolled changes. Countering CO2 emission by modulating insolation, we find considerable changes in local temperatures or rainfall.
John S. Keery, Philip B. Holden, and Neil R. Edwards
Clim. Past, 14, 215–238, https://doi.org/10.5194/cp-14-215-2018, https://doi.org/10.5194/cp-14-215-2018, 2018
Short summary
Short summary
In the Eocene (~ 55 million years ago), the Earth had high levels of atmospheric CO2, so studies of the Eocene can provide insights into the likely effects of present-day fossil fuel burning. We ran a low-resolution but very fast climate model with 50 combinations of CO2 and orbital parameters, and an Eocene layout of the oceans and continents. Climatic effects of CO2 are dominant but precession and obliquity strongly influence monsoon rainfall and ocean–land temperature contrasts, respectively.
Philip B. Holden, H. John B. Birks, Stephen J. Brooks, Mark B. Bush, Grace M. Hwang, Frazer Matthews-Bird, Bryan G. Valencia, and Robert van Woesik
Geosci. Model Dev., 10, 483–498, https://doi.org/10.5194/gmd-10-483-2017, https://doi.org/10.5194/gmd-10-483-2017, 2017
Short summary
Short summary
We describe BUMPER, a Bayesian transfer function for inferring past climate from micro-fossil assemblages. BUMPER is fully self-calibrating, straightforward to apply, and computationally fast. We apply BUMPER to a range of proxies, including both real and artificial data, demonstrating ease of use and applicability to multi-proxy reconstructions.
Inga Hense, Irene Stemmler, and Sebastian Sonntag
Biogeosciences, 14, 403–413, https://doi.org/10.5194/bg-14-403-2017, https://doi.org/10.5194/bg-14-403-2017, 2017
Short summary
Short summary
Marine biota drives a number of climate-relevant mechanisms, not all of which are included in current Earth system models (ESMs) used for climate projections. We identify three classes of mechanisms and argue that, to adequately resolve these mechanisms and to ensure links to and feedbacks with other Earth system components, ESMs need to account for five marine organism groups.
Philip B. Holden, Neil R. Edwards, Klaus Fraedrich, Edilbert Kirk, Frank Lunkeit, and Xiuhua Zhu
Geosci. Model Dev., 9, 3347–3361, https://doi.org/10.5194/gmd-9-3347-2016, https://doi.org/10.5194/gmd-9-3347-2016, 2016
Short summary
Short summary
We describe the development, tuning and climate of PLASIM–GENIE, a new intermediate complexity Atmosphere–Ocean General Circulation Model (AOGCM), built by coupling the Planet Simulator to the GENIE Earth system model.
Frazer Matthews-Bird, Stephen J. Brooks, Philip B. Holden, Encarni Montoya, and William D. Gosling
Clim. Past, 12, 1263–1280, https://doi.org/10.5194/cp-12-1263-2016, https://doi.org/10.5194/cp-12-1263-2016, 2016
Short summary
Short summary
Chironomidae are a family of two-winged aquatic fly of the order Diptera. The family is species rich (> 5000 described species) and extremely sensitive to environmental change, particualy temperature. Across the Northern Hemisphere, chironomids have been widely used as paleotemperature proxies as the chitinous remains of the insect are readily preserved in lake sediments. This is the first study using chironomids as paleotemperature proxies in tropical South America.
Giang T. Tran, Kevin I. C. Oliver, András Sóbester, David J. J. Toal, Philip B. Holden, Robert Marsh, Peter Challenor, and Neil R. Edwards
Adv. Stat. Clim. Meteorol. Oceanogr., 2, 17–37, https://doi.org/10.5194/ascmo-2-17-2016, https://doi.org/10.5194/ascmo-2-17-2016, 2016
Short summary
Short summary
In this work, we combine the information from a complex and a simple atmospheric model to efficiently build a statistical representation (an emulator) of the complex model and to study the relationship between them. Thanks to the improved efficiency, this process is now feasible for complex models, which are slow and costly to run. The constructed emulator provide approximations of the model output, allowing various analyses to be made without the need to run the complex model again.
A. M. Foley, P. B. Holden, N. R. Edwards, J.-F. Mercure, P. Salas, H. Pollitt, and U. Chewpreecha
Earth Syst. Dynam., 7, 119–132, https://doi.org/10.5194/esd-7-119-2016, https://doi.org/10.5194/esd-7-119-2016, 2016
Short summary
Short summary
We introduce GENIEem-PLASIM-ENTSem (GPem), a climate-carbon cycle emulator, showing how model emulation can be used in integrated assessment modelling to resolve regional climate impacts and systematically capture uncertainty. In a case study, we couple GPem to FTT:Power-E3MG, a non-equilibrium economic model with technology diffusion. We find that when the electricity sector is decarbonised by 90 %, further emissions reductions must be achieved in other sectors to avoid dangerous climate change.
M.-A. Knietzsch, A. Schröder, V. Lucarini, and F. Lunkeit
Earth Syst. Dynam., 6, 591–615, https://doi.org/10.5194/esd-6-591-2015, https://doi.org/10.5194/esd-6-591-2015, 2015
Short summary
Short summary
A general circulation model with an aquaplanet setup is used to study the impact of changes in the oceanic heat transport (OHT) on the atmospheric circulation. The atmosphere counterbalances the imposed changes in OHT. A stronger OHT leads to a decline in the intensity and a poleward shift of the maxima of both the Hadley and Ferrel cells. The efficiency of the climate machine, the intensity of the Lorenz energy cycle and the material entropy production of the system decline with increased OHT.
P. B. Holden, N. R. Edwards, P. H. Garthwaite, K. Fraedrich, F. Lunkeit, E. Kirk, M. Labriet, A. Kanudia, and F. Babonneau
Geosci. Model Dev., 7, 433–451, https://doi.org/10.5194/gmd-7-433-2014, https://doi.org/10.5194/gmd-7-433-2014, 2014
M. Eby, A. J. Weaver, K. Alexander, K. Zickfeld, A. Abe-Ouchi, A. A. Cimatoribus, E. Crespin, S. S. Drijfhout, N. R. Edwards, A. V. Eliseev, G. Feulner, T. Fichefet, C. E. Forest, H. Goosse, P. B. Holden, F. Joos, M. Kawamiya, D. Kicklighter, H. Kienert, K. Matsumoto, I. I. Mokhov, E. Monier, S. M. Olsen, J. O. P. Pedersen, M. Perrette, G. Philippon-Berthier, A. Ridgwell, A. Schlosser, T. Schneider von Deimling, G. Shaffer, R. S. Smith, R. Spahni, A. P. Sokolov, M. Steinacher, K. Tachiiri, K. Tokos, M. Yoshimori, N. Zeng, and F. Zhao
Clim. Past, 9, 1111–1140, https://doi.org/10.5194/cp-9-1111-2013, https://doi.org/10.5194/cp-9-1111-2013, 2013
P. B. Holden, N. R. Edwards, S. A. Müller, K. I. C. Oliver, R. M. Death, and A. Ridgwell
Biogeosciences, 10, 1815–1833, https://doi.org/10.5194/bg-10-1815-2013, https://doi.org/10.5194/bg-10-1815-2013, 2013
F. Joos, R. Roth, J. S. Fuglestvedt, G. P. Peters, I. G. Enting, W. von Bloh, V. Brovkin, E. J. Burke, M. Eby, N. R. Edwards, T. Friedrich, T. L. Frölicher, P. R. Halloran, P. B. Holden, C. Jones, T. Kleinen, F. T. Mackenzie, K. Matsumoto, M. Meinshausen, G.-K. Plattner, A. Reisinger, J. Segschneider, G. Shaffer, M. Steinacher, K. Strassmann, K. Tanaka, A. Timmermann, and A. J. Weaver
Atmos. Chem. Phys., 13, 2793–2825, https://doi.org/10.5194/acp-13-2793-2013, https://doi.org/10.5194/acp-13-2793-2013, 2013
P. B. Holden, N. R. Edwards, D. Gerten, and S. Schaphoff
Biogeosciences, 10, 339–355, https://doi.org/10.5194/bg-10-339-2013, https://doi.org/10.5194/bg-10-339-2013, 2013
Related subject area
Biogeophysics: Physical - Biological Coupling
The contrasted phytoplankton dynamics across a frontal system in the southwestern Mediterranean Sea
Sub-frontal niches of plankton communities driven by transport and trophic interactions at ocean fronts
Differential feeding habits of the shallow-water hydrothermal vent crab Xenograpsus testudinatus correlate with their resident vent types at a scale of meters
Satellite data reveal earlier and stronger phytoplankton blooms over fronts in the Gulf Stream region
Contribution of open ocean to the nutrient and phytoplankton inventory in a semi-enclosed coastal sea
Assimilation of multiple datasets results in large differences in regional- to global-scale NEE and GPP budgets simulated by a terrestrial biosphere model
Spatiotemporal lagging of predictors improves machine learning estimates of atmosphere–forest CO2 exchange
Phytoplankton reaction to an intense storm in the north-western Mediterranean Sea
Lagrangian and Eulerian time and length scales of mesoscale ocean chlorophyll from Bio-Argo floats and satellites
Reply to Lars Olof Björn's comment on “Fundamental molecules of life are pigments which arose and co-evolved as a response to the thermodynamic imperative of dissipating the prevailing solar spectrum” by Michaelian and Simeonov (2015)
Modelling submerged biofouled microplastics and their vertical trajectories
A Bayesian sequential updating approach to predict phenology of silage maize
Using an oceanographic model to investigate the mystery of the missing puerulus
Impact of moderately energetic fine-scale dynamics on the phytoplankton community structure in the western Mediterranean Sea
Seasonal ecosystem vulnerability to climatic anomalies in the Mediterranean
Grazing behavior and winter phytoplankton accumulation
Episodic subduction patches in the western North Pacific identified from BGC-Argo float data
Do Loop Current eddies stimulate productivity in the Gulf of Mexico?
Quasi-tropical cyclone caused anomalous autumn coccolithophore bloom in the Black Sea
Divergent climate feedbacks on winter wheat growing and dormancy periods as affected by sowing date in the North China Plain
Microclimatic comparison of lichen heaths and shrubs: shrubification generates atmospheric heating but subsurface cooling during the growing season
Fire and vegetation dynamics in northwest Siberia during the last 60 years based on high-resolution remote sensing
Evidence of eddy-related deep-ocean current variability in the northeast tropical Pacific Ocean induced by remote gap winds
Root uptake under mismatched distributions of water and nutrients in the root zone
Interactive impacts of meteorological and hydrological conditions on the physical and biogeochemical structure of a coastal system
Protists and collembolans alter microbial community composition, C dynamics and soil aggregation in simplified consumer–prey systems
Abundance and viability of particle-attached and free-floating bacteria in dusty and nondusty air
Linking tundra vegetation, snow, soil temperature, and permafrost
Drivers of the spatial phytoplankton gradient in estuarine–coastal systems: generic implications of a case study in a Dutch tidal bay
Biological and biogeochemical methods for estimating bioirrigation: a case study in the Oosterschelde estuary
Dissolved inorganic nitrogen and particulate organic nitrogen budget in the Yucatán shelf: driving mechanisms through a physical–biogeochemical coupled model
Basal thermal regime affects the biogeochemistry of subglacial systems
Influence of oceanic conditions in the energy transfer efficiency estimation of a micronekton model
Modulation of the North Atlantic deoxygenation by the slowdown of the nutrient stream
Stand age and species composition effects on surface albedo in a mixedwood boreal forest
Assessing the peatland hummock–hollow classification framework using high-resolution elevation models: implications for appropriate complexity ecosystem modeling
Tidal and seasonal forcing of dissolved nutrient fluxes in reef communities
Ideas and perspectives: Development of nascent autotrophic carbon fixation systems in various redox conditions of the fluid degassing on early Earth
Vertical distribution of chlorophyll in dynamically distinct regions of the southern Bay of Bengal
Remote and local drivers of oxygen and nitrate variability in the shallow oxygen minimum zone off Mauritania in June 2014
Longitudinal contrast in turbulence along a ∼ 19° S section in the Pacific and its consequences for biogeochemical fluxes
Ideas and perspectives: Strengthening the biogeosciences in environmental research networks
Imprint of Southern Ocean mesoscale eddies on chlorophyll
Grazing increases litter decomposition rate but decreases nitrogen release rate in an alpine meadow
Large- to submesoscale surface circulation and its implications on biogeochemical/biological horizontal distributions during the OUTPACE cruise (southwest Pacific)
OUTPACE long duration stations: physical variability, context of biogeochemical sampling, and evaluation of sampling strategy
Reviews and syntheses: on the roles trees play in building and plumbing the critical zone
Effects of shrub and tree cover increase on the near-surface atmosphere in northern Fennoscandia
Morphological plasticity of root growth under mild water stress increases water use efficiency without reducing yield in maize
Amplification of global warming through pH dependence of DMS production simulated with a fully coupled Earth system model
Roxane Tzortzis, Andrea M. Doglioli, Monique Messié, Stéphanie Barrillon, Anne A. Petrenko, Lloyd Izard, Yuan Zhao, Francesco d'Ovidio, Franck Dumas, and Gérald Gregori
Biogeosciences, 20, 3491–3508, https://doi.org/10.5194/bg-20-3491-2023, https://doi.org/10.5194/bg-20-3491-2023, 2023
Short summary
Short summary
We studied a finescale frontal structure in order to highlight its influence on the dynamics and distribution of phytoplankton communities. We computed the growth rates of several phytoplankton groups identified by flow cytometry in two water masses separated by the front. We found contrasted phytoplankton dynamics on the two sides of the front, consistent with the distribution of their abundances. Our study gives new insights into the physical and biological coupling on a finescale front.
Inès Mangolte, Marina Lévy, Clément Haëck, and Mark D. Ohman
Biogeosciences, 20, 3273–3299, https://doi.org/10.5194/bg-20-3273-2023, https://doi.org/10.5194/bg-20-3273-2023, 2023
Short summary
Short summary
Ocean fronts are ecological hotspots, associated with higher diversity and biomass for many marine organisms, from bacteria to whales. Using in situ data from the California Current Ecosystem, we show that far from being limited to the production of diatom blooms, fronts are the scene of complex biophysical couplings between biotic interactions (growth, competition, and predation) and transport by currents that generate planktonic communities with an original taxonomic and spatial structure.
Jing-Ying Wu, Siou-Yan Lin, Jung-Fu Huang, Chen-Tung Arthur Chen, Jia-Jang Hung, Shao-Hung Peng, and Li-Lian Liu
Biogeosciences, 20, 2693–2706, https://doi.org/10.5194/bg-20-2693-2023, https://doi.org/10.5194/bg-20-2693-2023, 2023
Short summary
Short summary
The shallow-water hydrothermal vents off the Kueishan Island, Taiwan, have the most extreme records of pH values (1.52), temperatures (116 °C), and H2S concentrations (172.4 mmol mol−1) in the world. White and yellow vents differ in the color and physical and chemical characteristics of emitted plumes. We found that the feeding habits of the endemic vent crabs (Xenograpsus testudinatus) are adapted to their resident vent types at a distance of 100 m, and the trans-vent movement is uncommon.
Clément Haëck, Marina Lévy, Inès Mangolte, and Laurent Bopp
Biogeosciences, 20, 1741–1758, https://doi.org/10.5194/bg-20-1741-2023, https://doi.org/10.5194/bg-20-1741-2023, 2023
Short summary
Short summary
Phytoplankton vary in abundance in the ocean over large regions and with the seasons but also because of small-scale heterogeneities in surface temperature, called fronts. Here, using satellite imagery, we found that fronts enhance phytoplankton much more where it is already growing well, but despite large local increases the enhancement for the region is modest (5 %). We also found that blooms start 1 to 2 weeks earlier over fronts. These effects may have implications for ecosystems.
Qian Leng, Xinyu Guo, Junying Zhu, and Akihiko Morimoto
EGUsphere, https://doi.org/10.5194/egusphere-2023-753, https://doi.org/10.5194/egusphere-2023-753, 2023
Short summary
Short summary
Using a numerical model, we revealed that a large proportion of nutrients in a semi-enclosed sea (Seto Inland Sea, Japan) comes from the Pacific Ocean and supports the growth of more than half of phytoplankton in the sea. Such results imply that the human-made management of nutrient load from the land needs to consider the presence of oceanic nutrients that act as a background concentration and are not controlled by human activity.
Cédric Bacour, Natasha MacBean, Frédéric Chevallier, Sébastien Léonard, Ernest N. Koffi, and Philippe Peylin
Biogeosciences, 20, 1089–1111, https://doi.org/10.5194/bg-20-1089-2023, https://doi.org/10.5194/bg-20-1089-2023, 2023
Short summary
Short summary
The impact of assimilating different dataset combinations on regional to global-scale C budgets is explored with the ORCHIDEE model. Assimilating simultaneously multiple datasets is preferable to optimize the values of the model parameters and avoid model overfitting. The challenges in constraining soil C disequilibrium using atmospheric CO2 data are highlighted for an accurate prediction of the land sink distribution.
Matti Kämäräinen, Juha-Pekka Tuovinen, Markku Kulmala, Ivan Mammarella, Juha Aalto, Henriikka Vekuri, Annalea Lohila, and Anna Lintunen
Biogeosciences, 20, 897–909, https://doi.org/10.5194/bg-20-897-2023, https://doi.org/10.5194/bg-20-897-2023, 2023
Short summary
Short summary
In this study, we introduce a new method for modeling the exchange of carbon between the atmosphere and a study site located in a boreal forest in southern Finland. Our method yields more accurate results than previous approaches in this context. Accurately estimating carbon exchange is crucial for gaining a better understanding of the role of forests in regulating atmospheric carbon and addressing climate change.
Stéphanie Barrillon, Robin Fuchs, Anne A. Petrenko, Caroline Comby, Anthony Bosse, Christophe Yohia, Jean-Luc Fuda, Nagib Bhairy, Frédéric Cyr, Andrea M. Doglioli, Gérald Grégori, Roxane Tzortzis, Francesco d'Ovidio, and Melilotus Thyssen
Biogeosciences, 20, 141–161, https://doi.org/10.5194/bg-20-141-2023, https://doi.org/10.5194/bg-20-141-2023, 2023
Short summary
Short summary
Extreme weather events can have a major impact on ocean physics and biogeochemistry, but their study is challenging. In May 2019, an intense storm occurred in the north-western Mediterranean Sea, during which in situ multi-platform measurements were performed. The results show a strong impact on the surface phytoplankton, highlighting the need for high-resolution measurements coupling physics and biology during these violent events that may become more common in the context of global change.
Darren C. McKee, Scott C. Doney, Alice Della Penna, Emmanuel S. Boss, Peter Gaube, Michael J. Behrenfeld, and David M. Glover
Biogeosciences, 19, 5927–5952, https://doi.org/10.5194/bg-19-5927-2022, https://doi.org/10.5194/bg-19-5927-2022, 2022
Short summary
Short summary
As phytoplankton (small, drifting photosynthetic organisms) drift with ocean currents, biomass accumulation rates should be evaluated in a Lagrangian (observer moves with a fluid parcel) as opposed to an Eulerian (observer is stationary) framework. Here, we use profiling floats and surface drifters combined with satellite data to analyse time and length scales of chlorophyll concentrations (a proxy for biomass) and of velocity to quantify how phytoplankton variability is related to water motion.
Karo Michaelian and Aleksandar Simeonov
Biogeosciences, 19, 4029–4034, https://doi.org/10.5194/bg-19-4029-2022, https://doi.org/10.5194/bg-19-4029-2022, 2022
Short summary
Short summary
We reply to Lars Björn's critique of our article concerning the importance of photon dissipation to the origin and evolution of the biosphere. Björn doubts our assertion that organic pigments, ecosystems, and the biosphere arose out of a non-equilibrium thermodynamic imperative to increase global photon dissipation. He shows that the albedo of some non-living material is less than that of living material. We point out, however, that photon dissipation involves other factors besides albedo.
Reint Fischer, Delphine Lobelle, Merel Kooi, Albert Koelmans, Victor Onink, Charlotte Laufkötter, Linda Amaral-Zettler, Andrew Yool, and Erik van Sebille
Biogeosciences, 19, 2211–2234, https://doi.org/10.5194/bg-19-2211-2022, https://doi.org/10.5194/bg-19-2211-2022, 2022
Short summary
Short summary
Since current estimates show that only about 1 % of the all plastic that enters the ocean is floating at the surface, we look at subsurface processes that can cause vertical movement of (micro)plastic. We investigate how modelled algal attachment and the ocean's vertical movement can cause particles to sink and oscillate in the open ocean. Particles can sink to depths of > 5000 m in regions with high wind intensity and mainly remain close to the surface with low winds and biological activity.
Michelle Viswanathan, Tobias K. D. Weber, Sebastian Gayler, Juliane Mai, and Thilo Streck
Biogeosciences, 19, 2187–2209, https://doi.org/10.5194/bg-19-2187-2022, https://doi.org/10.5194/bg-19-2187-2022, 2022
Short summary
Short summary
We analysed the evolution of model parameter uncertainty and prediction error as we updated parameters of a maize phenology model based on yearly observations, by sequentially applying Bayesian calibration. Although parameter uncertainty was reduced, prediction quality deteriorated when calibration and prediction data were from different maize ripening groups or temperature conditions. The study highlights that Bayesian methods should account for model limitations and inherent data structures.
Jessica Kolbusz, Tim Langlois, Charitha Pattiaratchi, and Simon de Lestang
Biogeosciences, 19, 517–539, https://doi.org/10.5194/bg-19-517-2022, https://doi.org/10.5194/bg-19-517-2022, 2022
Short summary
Short summary
Western rock lobster larvae spend up to 11 months in offshore waters before ocean currents and their ability to swim transport them back to the coast. In 2008, there was a reduction in the number of puerulus (larvae) settling into the fishery. We use an oceanographic model to see how the environment may have contributed to the reduction. Our results show that a combination of effects from local currents and a widespread quiet period in the ocean off WA likely led to less puerulus settlement.
Roxane Tzortzis, Andrea M. Doglioli, Stéphanie Barrillon, Anne A. Petrenko, Francesco d'Ovidio, Lloyd Izard, Melilotus Thyssen, Ananda Pascual, Bàrbara Barceló-Llull, Frédéric Cyr, Marc Tedetti, Nagib Bhairy, Pierre Garreau, Franck Dumas, and Gérald Gregori
Biogeosciences, 18, 6455–6477, https://doi.org/10.5194/bg-18-6455-2021, https://doi.org/10.5194/bg-18-6455-2021, 2021
Short summary
Short summary
This work analyzes an original high-resolution data set collected in the Mediterranean Sea. The major result is the impact of a fine-scale frontal structure on the distribution of phytoplankton groups, in an area of moderate energy with oligotrophic conditions. Our results provide an in situ confirmation of the findings obtained by previous modeling studies and remote sensing about the structuring effect of the fine-scale ocean dynamics on the structure of the phytoplankton community.
Johannes Vogel, Eva Paton, and Valentin Aich
Biogeosciences, 18, 5903–5927, https://doi.org/10.5194/bg-18-5903-2021, https://doi.org/10.5194/bg-18-5903-2021, 2021
Short summary
Short summary
This study investigates extreme ecosystem impacts evoked by temperature and soil moisture in the Mediterranean Basin for the time span 1999–2019 with a specific focus on seasonal variations. The analysis showed that ecosystem vulnerability is caused by several varying combinations of both drivers during the yearly cycle. The approach presented here helps to provide insights on the specific phenological stage of the year in which ecosystem vulnerability to a certain climatic condition occurs.
Mara Freilich, Alexandre Mignot, Glenn Flierl, and Raffaele Ferrari
Biogeosciences, 18, 5595–5607, https://doi.org/10.5194/bg-18-5595-2021, https://doi.org/10.5194/bg-18-5595-2021, 2021
Short summary
Short summary
Observations reveal that in some regions phytoplankton biomass increases during the wintertime when growth conditions are sub-optimal, which has been attributed to a release from grazing during mixed layer deepening. Measurements of grazer populations to support this theory are lacking. We demonstrate that a release from grazing when the winter mixed layer is deepening holds only for certain grazing models, extending the use of phytoplankton observations to make inferences about grazer dynamics.
Shuangling Chen, Mark L. Wells, Rui Xin Huang, Huijie Xue, Jingyuan Xi, and Fei Chai
Biogeosciences, 18, 5539–5554, https://doi.org/10.5194/bg-18-5539-2021, https://doi.org/10.5194/bg-18-5539-2021, 2021
Short summary
Short summary
Subduction transports surface waters to the oceanic interior, which can supply significant amounts of carbon and oxygen to the twilight zone. Using a novel BGC-Argo dataset covering the western North Pacific, we successfully identified the imprints of episodic shallow subduction patches. These subduction patches were observed mainly in spring and summer (70.6 %), and roughly half of them extended below ~ 450 m, injecting carbon- and oxygen-enriched waters into the ocean interior.
Pierre Damien, Julio Sheinbaum, Orens Pasqueron de Fommervault, Julien Jouanno, Lorena Linacre, and Olaf Duteil
Biogeosciences, 18, 4281–4303, https://doi.org/10.5194/bg-18-4281-2021, https://doi.org/10.5194/bg-18-4281-2021, 2021
Short summary
Short summary
The Gulf of Mexico deep waters are relatively poor in phytoplankton biomass due to low levels of nutrients in the upper layers. Using modeling techniques, we find that the long-living anticyclonic Loop Current eddies that are shed episodically from the Yucatan Channel strongly shape the distribution of phytoplankton and, more importantly, stimulate their growth. This results from the contribution of multiple mechanisms of physical–biogeochemical interactions discussed in this study.
Sergey V. Stanichny, Elena A. Kubryakova, and Arseny A. Kubryakov
Biogeosciences, 18, 3173–3188, https://doi.org/10.5194/bg-18-3173-2021, https://doi.org/10.5194/bg-18-3173-2021, 2021
Short summary
Short summary
In this paper, we show that the short-term impact of tropical cyclones can trigger the intense, long-term bloom of coccolithophores, which are major marine calcifiers playing an important role in the balance and fluxes of inorganic carbon in the ocean. In our paper, we describe the evolution of and physical reasons for such an unusual bloom observed in autumn 2005 in the Black Sea on the basis of satellite data.
Fengshan Liu, Ying Chen, Nini Bai, Dengpan Xiao, Huizi Bai, Fulu Tao, and Quansheng Ge
Biogeosciences, 18, 2275–2287, https://doi.org/10.5194/bg-18-2275-2021, https://doi.org/10.5194/bg-18-2275-2021, 2021
Short summary
Short summary
The sowing date is key to the surface biophysical processes in the winter dormancy period. The climate effect of the sowing date shift is therefore very interesting and may contribute to the mitigation of climate change. An earlier sowing date always had a higher LAI but a higher temperature in the dormancy period and a lower temperature in the growth period. The main reason was the relative contributions of the surface albedo and energy partitioning processes.
Peter Aartsma, Johan Asplund, Arvid Odland, Stefanie Reinhardt, and Hans Renssen
Biogeosciences, 18, 1577–1599, https://doi.org/10.5194/bg-18-1577-2021, https://doi.org/10.5194/bg-18-1577-2021, 2021
Short summary
Short summary
In the literature, it is generally assumed that alpine lichen heaths keep their direct environment cool due to their relatively high albedo. However, we reveal that the soil temperature and soil heat flux are higher below lichens than below shrubs during the growing season, despite a lower net radiation for lichens. We also show that the differences in microclimatic conditions between these two vegetation types are more pronounced during warm and sunny days than during cold and cloudy days.
Oleg Sizov, Ekaterina Ezhova, Petr Tsymbarovich, Andrey Soromotin, Nikolay Prihod'ko, Tuukka Petäjä, Sergej Zilitinkevich, Markku Kulmala, Jaana Bäck, and Kajar Köster
Biogeosciences, 18, 207–228, https://doi.org/10.5194/bg-18-207-2021, https://doi.org/10.5194/bg-18-207-2021, 2021
Short summary
Short summary
In changing climate, tundra is expected to turn into shrubs and trees, diminishing reindeer pasture and increasing risks of tick-borne diseases. However, this transition may require a disturbance. Fires in Siberia are increasingly widespread. We studied wildfire dynamics and tundra–forest transition over 60 years in northwest Siberia near the Arctic Circle. Based on satellite data analysis, we found that transition occurs in 40 %–85 % of burned tundra compared to 5 %–15 % in non-disturbed areas.
Kaveh Purkiani, André Paul, Annemiek Vink, Maren Walter, Michael Schulz, and Matthias Haeckel
Biogeosciences, 17, 6527–6544, https://doi.org/10.5194/bg-17-6527-2020, https://doi.org/10.5194/bg-17-6527-2020, 2020
Short summary
Short summary
There has been a steady increase in interest in mining of deep-sea minerals in the eastern Pacific Ocean recently. The ocean state in this region is known to be highly influenced by rotating bodies of water (eddies), some of which can travel long distances in the ocean and impact the deeper layers of the ocean. Better insight into the variability of eddy activity in this region is of great help to mitigate the impact of the benthic ecosystem from future potential deep-sea mining activity.
Jing Yan, Nathaniel A. Bogie, and Teamrat A. Ghezzehei
Biogeosciences, 17, 6377–6392, https://doi.org/10.5194/bg-17-6377-2020, https://doi.org/10.5194/bg-17-6377-2020, 2020
Short summary
Short summary
An uneven supply of water and nutrients in soils often drives how plants behave. We observed that plants extract all their required nutrients from dry soil patches in sufficient quantity, provided adequate water is available elsewhere in the root zone. Roots in nutrient-rich dry patches facilitate the nutrient acquisition by extensive growth, water release, and modifying water retention in their immediate environment. The findings are valuable in managing nutrient losses in agricultural systems.
Onur Kerimoglu, Yoana G. Voynova, Fatemeh Chegini, Holger Brix, Ulrich Callies, Richard Hofmeister, Knut Klingbeil, Corinna Schrum, and Justus E. E. van Beusekom
Biogeosciences, 17, 5097–5127, https://doi.org/10.5194/bg-17-5097-2020, https://doi.org/10.5194/bg-17-5097-2020, 2020
Short summary
Short summary
In this study, using extensive field observations and a numerical model, we analyzed the physical and biogeochemical structure of a coastal system following an extreme flood event. Our results suggest that a number of anomalous observations were driven by a co-occurrence of peculiar meteorological conditions and increased riverine discharges. Our results call for attention to the combined effects of hydrological and meteorological extremes that are anticipated to increase in frequency.
Amandine Erktan, Matthias C. Rillig, Andrea Carminati, Alexandre Jousset, and Stefan Scheu
Biogeosciences, 17, 4961–4980, https://doi.org/10.5194/bg-17-4961-2020, https://doi.org/10.5194/bg-17-4961-2020, 2020
Short summary
Short summary
Soil aggregation is crucial for soil functioning. While the role of bacteria and fungi in soil aggregation is well established, how predators feeding on microbes modify soil aggregation has hardly been investigated. We showed for the first time that protists modify soil aggregation, presumably through changes in the production of bacterial mucilage, and that collembolans reduce soil aggregation, presumably by reducing the abundance of saprotrophic fungi.
Wei Hu, Kotaro Murata, Chunlan Fan, Shu Huang, Hiromi Matsusaki, Pingqing Fu, and Daizhou Zhang
Biogeosciences, 17, 4477–4487, https://doi.org/10.5194/bg-17-4477-2020, https://doi.org/10.5194/bg-17-4477-2020, 2020
Short summary
Short summary
This paper reports the first estimate of the status of bacteria in long-distance-transported Asian dust, demonstrating that airborne dust, which can carry viable and nonviable bacteria on particle surfaces, is an efficient medium for constantly spreading bacteria at regional and even global scales. Such data are essential to better model and understand the roles and activities of bioaerosols in environmental evolution and climate change and the potential risks of bioaerosols to human health.
Inge Grünberg, Evan J. Wilcox, Simon Zwieback, Philip Marsh, and Julia Boike
Biogeosciences, 17, 4261–4279, https://doi.org/10.5194/bg-17-4261-2020, https://doi.org/10.5194/bg-17-4261-2020, 2020
Short summary
Short summary
Based on topsoil temperature data for different vegetation types at a low Arctic tundra site, we found large small-scale variability. Winter temperatures were strongly influenced by vegetation through its effects on snow. Summer temperatures were similar below most vegetation types and not consistently related to late summer permafrost thaw depth. Given that vegetation type defines the relationship between winter and summer soil temperature and thaw depth, it controls permafrost vulnerability.
Long Jiang, Theo Gerkema, Jacco C. Kromkamp, Daphne van der Wal, Pedro Manuel Carrasco De La Cruz, and Karline Soetaert
Biogeosciences, 17, 4135–4152, https://doi.org/10.5194/bg-17-4135-2020, https://doi.org/10.5194/bg-17-4135-2020, 2020
Short summary
Short summary
A seaward increasing chlorophyll-a gradient is observed during the spring bloom in a Dutch tidal bay. Biophysical model runs indicate the roles of bivalve grazing and tidal import in shaping the gradient. Five common spatial phytoplankton patterns are summarized in global estuarine–coastal ecosystems: seaward increasing, seaward decreasing, concave with a chlorophyll maximum, weak spatial gradients, and irregular patterns.
Emil De Borger, Justin Tiano, Ulrike Braeckman, Tom Ysebaert, and Karline Soetaert
Biogeosciences, 17, 1701–1715, https://doi.org/10.5194/bg-17-1701-2020, https://doi.org/10.5194/bg-17-1701-2020, 2020
Short summary
Short summary
By applying a novel technique to quantify organism-induced sediment–water column fluid exchange (bioirrigation), we show that organisms in subtidal (permanently submerged) areas have similar bioirrigation rates as those that inhabit intertidal areas (not permanently submerged), but organisms in the latter irrigate deeper burrows in this study. Our results expand on traditional methods to quantify bioirrigation rates and broaden the pool of field measurements of bioirrigation rates.
Sheila N. Estrada-Allis, Julio Sheinbaum Pardo, Joao M. Azevedo Correia de Souza, Cecilia Elizabeth Enríquez Ortiz, Ismael Mariño Tapia, and Jorge A. Herrera-Silveira
Biogeosciences, 17, 1087–1111, https://doi.org/10.5194/bg-17-1087-2020, https://doi.org/10.5194/bg-17-1087-2020, 2020
Short summary
Short summary
Continental shelves are the most productive areas in the ocean and can have an important impact on the nutrient cycle as well as the climate system. The one in Yucatán is the largest shelf in the Gulf of Mexico. However, its nutrient budget remains unidentifiable. Here we propose not only a general nutrient budget for the Yucatán Shelf but also the physical processes responsible for its pathway modulation through a physical–biogeochemical coupled model of the whole Gulf of Mexico.
Ashley Dubnick, Martin Sharp, Brad Danielson, Alireza Saidi-Mehrabad, and Joel Barker
Biogeosciences, 17, 963–977, https://doi.org/10.5194/bg-17-963-2020, https://doi.org/10.5194/bg-17-963-2020, 2020
Short summary
Short summary
We found that glaciers with basal temperatures near the melting point mobilize more solutes, nutrients, and microbes from the underlying substrate and are more likely to promote in situ biogeochemical activity than glaciers with basal temperatures well below the melting point. The temperature at the base of glaciers is therefore an important control on the biogeochemistry of ice near glacier beds, and, ultimately, the potential solutes, nutrients, and microbes exported from glaciated watersheds.
Audrey Delpech, Anna Conchon, Olivier Titaud, and Patrick Lehodey
Biogeosciences, 17, 833–850, https://doi.org/10.5194/bg-17-833-2020, https://doi.org/10.5194/bg-17-833-2020, 2020
Short summary
Short summary
Micronekton is an important, yet poorly known, component of the trophic chain, which partly contributes to the storage of CO2 in the deep ocean thanks to biomass vertical migrations. In this study, we characterize the ideal sampling regions to estimate the amount of biomass that undergoes theses migrations. We find that observations made in warm, nondynamic and productive waters reduce the error of the estimation by 20 %. This result should likely serve for future in situ network deployment.
Filippos Tagklis, Takamitsu Ito, and Annalisa Bracco
Biogeosciences, 17, 231–244, https://doi.org/10.5194/bg-17-231-2020, https://doi.org/10.5194/bg-17-231-2020, 2020
Short summary
Short summary
Deoxygenation of the oceans is potentially one of the most severe ecosystem stressors resulting from global warming given the high sensitivity of dissolved oxygen to ocean temperatures. Climate models suggest that despite the thermodynamic tendency of the oceans to lose oxygen, certain regions experience significant changes in the biologically driven O2 consumption, resulting in a resistance against deoxygenation. Overturning circulation changes are responsible for such a behavior.
Mohammad Abdul Halim, Han Y. H. Chen, and Sean C. Thomas
Biogeosciences, 16, 4357–4375, https://doi.org/10.5194/bg-16-4357-2019, https://doi.org/10.5194/bg-16-4357-2019, 2019
Short summary
Short summary
Using field data collected over 4 years across a range of stand ages, we investigated how seasonal surface albedo in boreal forest varies with stand age, stand structure, and composition. Our results indicate that successional change in species composition is a key driver of age–related patterns in albedo, with hardwood species associated with higher albedo. The patterns described have important implications for both climate modeling and
climate–smartboreal forest management.
Paul A. Moore, Maxwell C. Lukenbach, Dan K. Thompson, Nick Kettridge, Gustaf Granath, and James M. Waddington
Biogeosciences, 16, 3491–3506, https://doi.org/10.5194/bg-16-3491-2019, https://doi.org/10.5194/bg-16-3491-2019, 2019
Short summary
Short summary
Using very-high-resolution digital elevation models (DEMs), we assessed the basic structure and microtopographic variability of hummock–hollow plots at boreal and hemi-boreal sites primarily in North America. Using a simple model of peatland biogeochemical function, our results suggest that both surface heating and moss productivity may not be adequately resolved in models which only consider idealized hummock–hollow units.
Renee K. Gruber, Ryan J. Lowe, and James L. Falter
Biogeosciences, 16, 1921–1935, https://doi.org/10.5194/bg-16-1921-2019, https://doi.org/10.5194/bg-16-1921-2019, 2019
Short summary
Short summary
Researchers from the University of Western Australia's Oceans Institute are studying large tides (up to 12 m range) that occur in the Kimberley region of Australia. These tides flush coral reefs with water rich in nutrients, which supports the growth of reef organisms. In this paper, we show how tidal cycles and seasons control nutrient availability on reefs. This study is among the first published accounts of reefs and water quality data in the remote and pristine Kimberley region.
Sergey A. Marakushev and Ol'ga V. Belonogova
Biogeosciences, 16, 1817–1828, https://doi.org/10.5194/bg-16-1817-2019, https://doi.org/10.5194/bg-16-1817-2019, 2019
Short summary
Short summary
Among the existing theories of the autotrophic origin of life, CO2 is usually considered to be the carbon source for nascent autotrophic metabolism. However, ancestral carbon used in metabolism may have been derived from CH4 if the outflow of magma fluid to the surface of the Earth consisted mainly of methane. The hydrothermal system model is considered in the form of a phase diagram, which demonstrates the area of redox and P and T conditions favorable to development of primary methanotroph.
Venugopal Thushara, Puthenveettil Narayana Menon Vinayachandran, Adrian J. Matthews, Benjamin G. M. Webber, and Bastien Y. Queste
Biogeosciences, 16, 1447–1468, https://doi.org/10.5194/bg-16-1447-2019, https://doi.org/10.5194/bg-16-1447-2019, 2019
Short summary
Short summary
Chlorophyll distribution in the ocean remains to be explored in detail, despite its climatic significance. Here, we document the vertical structure of chlorophyll in the Bay of Bengal using observations and a model. The shape of chlorophyll profiles, characterized by prominent deep chlorophyll maxima, varies in dynamically different regions, controlled by the monsoonal forcings. The present study provides new insights into the vertical distribution of chlorophyll, rarely observed by satellites.
Soeren Thomsen, Johannes Karstensen, Rainer Kiko, Gerd Krahmann, Marcus Dengler, and Anja Engel
Biogeosciences, 16, 979–998, https://doi.org/10.5194/bg-16-979-2019, https://doi.org/10.5194/bg-16-979-2019, 2019
Short summary
Short summary
Physical and biogeochemical observations from an autonomous underwater vehicle in combination with ship-based measurements are used to investigate remote and local drivers of the oxygen and nutrient variability off Mauritania. Beside the transport of oxygen and nutrients characteristics from remote areas towards Mauritania also local remineralization of organic material close to the seabed seems to be important for the distribution of oxygen and nutrients.
Pascale Bouruet-Aubertot, Yannis Cuypers, Andrea Doglioli, Mathieu Caffin, Christophe Yohia, Alain de Verneil, Anne Petrenko, Dominique Lefèvre, Hervé Le Goff, Gilles Rougier, Marc Picheral, and Thierry Moutin
Biogeosciences, 15, 7485–7504, https://doi.org/10.5194/bg-15-7485-2018, https://doi.org/10.5194/bg-15-7485-2018, 2018
Short summary
Short summary
The OUTPACE cruise took place between New Caledonia and French Polynesia. The main purpose was to understand how micro-organisms can survive in a very poor environment. One main source of nutrients is at depth, below the euphotic layer where micro-organisms live. The purpose of the turbulence measurements was to determine to which extent turbulence may
upliftnutrients into the euphotic layer. The origin of the turbulence that was found contrasted along the transect was also determined.
Daniel D. Richter, Sharon A. Billings, Peter M. Groffman, Eugene F. Kelly, Kathleen A. Lohse, William H. McDowell, Timothy S. White, Suzanne Anderson, Dennis D. Baldocchi, Steve Banwart, Susan Brantley, Jean J. Braun, Zachary S. Brecheisen, Charles W. Cook, Hilairy E. Hartnett, Sarah E. Hobbie, Jerome Gaillardet, Esteban Jobbagy, Hermann F. Jungkunst, Clare E. Kazanski, Jagdish Krishnaswamy, Daniel Markewitz, Katherine O'Neill, Clifford S. Riebe, Paul Schroeder, Christina Siebe, Whendee L. Silver, Aaron Thompson, Anne Verhoef, and Ganlin Zhang
Biogeosciences, 15, 4815–4832, https://doi.org/10.5194/bg-15-4815-2018, https://doi.org/10.5194/bg-15-4815-2018, 2018
Short summary
Short summary
As knowledge in biology and geology explodes, science becomes increasingly specialized. Given the overlap of the environmental sciences, however, the explosion in knowledge inevitably creates opportunities for interconnecting the biogeosciences. Here, 30 scientists emphasize the opportunities for biogeoscience collaborations across the world’s remarkable long-term environmental research networks that can advance science and engage larger scientific and public audiences.
Ivy Frenger, Matthias Münnich, and Nicolas Gruber
Biogeosciences, 15, 4781–4798, https://doi.org/10.5194/bg-15-4781-2018, https://doi.org/10.5194/bg-15-4781-2018, 2018
Short summary
Short summary
Although mesoscale ocean eddies are ubiquitous in the Southern Ocean (SO), their regional and seasonal association with phytoplankton has not been quantified. We identify over 100 000 eddies and determine the associated phytoplankton biomass anomalies using satellite-based chlorophyll (Chl) as a proxy. The emerging Chl anomalies can be explained largely by lateral advection of Chl by eddies. This impact of eddies on phytoplankton may implicate downstream effects on SO biogeochemical properties.
Yi Sun, Xiong Z. He, Fujiang Hou, Zhaofeng Wang, and Shenghua Chang
Biogeosciences, 15, 4233–4243, https://doi.org/10.5194/bg-15-4233-2018, https://doi.org/10.5194/bg-15-4233-2018, 2018
Short summary
Short summary
To investigate how grazing alters litter composition, quality and decomposition, we collected litter from grazing (GP) and grazing exclusion paddocks (GEP) and incubated them in situ and across sites. Grazing increased litter N and grazing exclusion increased litter mass of palatable species and promoted SOC. Litter decomposed faster in GP and N was opposite. Site environment had more impact on litter decomposition. Results may be helpful in developing strategies to restore degraded grasslands.
Louise Rousselet, Alain de Verneil, Andrea M. Doglioli, Anne A. Petrenko, Solange Duhamel, Christophe Maes, and Bruno Blanke
Biogeosciences, 15, 2411–2431, https://doi.org/10.5194/bg-15-2411-2018, https://doi.org/10.5194/bg-15-2411-2018, 2018
Short summary
Short summary
The patterns of the large- and fine-scale surface circulation on biogeochemical and biological distributions are examined in the western tropical South Pacific (WTSP) in the context of the OUTPACE oceanographic cruise. The combined use of in situ and satellite data allows for the identification of water mass transport pathways and fine-scale structures, such as fronts, that drive surface distribution of tracers and microbial community structures.
Alain de Verneil, Louise Rousselet, Andrea M. Doglioli, Anne A. Petrenko, Christophe Maes, Pascale Bouruet-Aubertot, and Thierry Moutin
Biogeosciences, 15, 2125–2147, https://doi.org/10.5194/bg-15-2125-2018, https://doi.org/10.5194/bg-15-2125-2018, 2018
Short summary
Short summary
Oceanographic campaigns to measure biogeochemical processes popularly deploy drifters with onboard incubations to stay in a single body of water. Here, we aggregate physical data taken during such a cruise, OUTPACE, to independently test in a new approach whether the drifter really stayed in what can be considered a single biological or chemical environment. This study concludes that future campaigns would benefit from similar data collection and analysis to validate their sampling strategy.
Susan L. Brantley, David M. Eissenstat, Jill A. Marshall, Sarah E. Godsey, Zsuzsanna Balogh-Brunstad, Diana L. Karwan, Shirley A. Papuga, Joshua Roering, Todd E. Dawson, Jaivime Evaristo, Oliver Chadwick, Jeffrey J. McDonnell, and Kathleen C. Weathers
Biogeosciences, 14, 5115–5142, https://doi.org/10.5194/bg-14-5115-2017, https://doi.org/10.5194/bg-14-5115-2017, 2017
Short summary
Short summary
This review represents the outcome from an invigorating workshop discussion that involved tree physiologists, geomorphologists, ecologists, geochemists, and hydrologists and developed nine hypotheses that could be tested. We argue these hypotheses point to the essence of issues we must explore if we are to understand how the natural system of the earth surface evolves, and how humans will affect its evolution. This paper will create discussion and interest both before and after publication.
Johanne H. Rydsaa, Frode Stordal, Anders Bryn, and Lena M. Tallaksen
Biogeosciences, 14, 4209–4227, https://doi.org/10.5194/bg-14-4209-2017, https://doi.org/10.5194/bg-14-4209-2017, 2017
Short summary
Short summary
We investigate the atmospheric sensitivity to an expansion in shrub and tree cover in the northern Fennoscandia region. We applied a regional weather and climate model in evaluating biophysical effects of increased shrub cover at a fine resolution. We find that shrub cover increase causes a warming that is sensitive to the shrub and tree heights. Cooling effects include increased snow cover, cloud cover, and precipitation. We show that the net warming will likely increase in the future.
Qian Cai, Yulong Zhang, Zhanxiang Sun, Jiaming Zheng, Wei Bai, Yue Zhang, Yang Liu, Liangshan Feng, Chen Feng, Zhe Zhang, Ning Yang, Jochem B. Evers, and Lizhen Zhang
Biogeosciences, 14, 3851–3858, https://doi.org/10.5194/bg-14-3851-2017, https://doi.org/10.5194/bg-14-3851-2017, 2017
Short summary
Short summary
Large yield gaps exist in rain-fed maize in semi-arid regions caused by frequent droughts halfway through the growing period due to uneven distribution of rainfall. It can be questioned whether irrigation systems are economically and ecologically required. Maize yield was not affected by mild water stress due to the morphological plasticity in root growth. Our results help to mitigate drought risk in dry-land agriculture.
Jörg Schwinger, Jerry Tjiputra, Nadine Goris, Katharina D. Six, Alf Kirkevåg, Øyvind Seland, Christoph Heinze, and Tatiana Ilyina
Biogeosciences, 14, 3633–3648, https://doi.org/10.5194/bg-14-3633-2017, https://doi.org/10.5194/bg-14-3633-2017, 2017
Short summary
Short summary
Transient global warming under the high emission scenario RCP8.5 is amplified by up to 6 % if a pH dependency of marine DMS production is assumed. Importantly, this additional warming is not spatially homogeneous but shows a pronounced north–south gradient. Over the Antarctic continent, the additional warming is almost twice the global average. In the Southern Ocean we find a small DMS–climate feedback that counteracts the original reduction of DMS production due to ocean acidification.
Cited articles
Adloff, M., Greene, S. E., Parkinson, I. J., Naafs, B. D. A., Preston, W.,
Ridgwell, A., Lunt, D. J., Jiménez, J. M. C., and Monteiro, F. M.:
Unravelling the sources of carbon emissions at the onset of Oceanic
Anoxic Event (OAE) 1a, Earth Planet. Sci. Lett., 530,
115947, https://doi.org/10.1016/j.epsl.2019.115947, 2020. a
Alvarez, S. A., Gibbs, S. J., Bown, P. R., Kim, H., Sheward, R. M., and
Ridgwell, A.: Diversity decoupled from ecosystem function and resilience
during mass extinction recovery, Nature, 574, 242–245, 2019. a
Anderson, W., Gnanadesikan, A., Hallberg, R., Dunne, J., and Samuels, B.:
Impact of ocean color on the maintenance of the Pacific Cold Tongue,
Geophys. Res. Lett., 34, 11, https://doi.org/10.1029/2007GL030100, 2007. a, b
Armstrong McKay, D. I., Cornell, S. E., Richardson, K., and Rockström, J.: Resolving ecological feedbacks on the ocean carbon sink in Earth system models, Earth Syst. Dynam., 12, 797–818, https://doi.org/10.5194/esd-12-797-2021, 2021. a, b
Asselot, R., Lunkeit, F., Holden, P. B., and Hense, I.: The relative importance
of phytoplankton light absorption and ecosystem complexity in an Earth
system model, J. Adv. Model. Earth Sy., 13,
e2020MS002110, https://doi.org/10.1029/2020MS002110, 2021. a, b, c, d, e, f, g, h, i, j, k, l, m, n, o, p, q, r, s
Cameron, D. R., Lenton, T. M., Ridgwell, A. J., Shepherd, J. G., Marsh, R., and
Yool, A.: A factorial analysis of the marine carbon cycle and ocean
circulation controls on atmospheric CO2, Global Biogeochem. Cy.,
19, 4, https://doi.org/10.1029/2005GB002489, 2005. a, b
Claussen, M., Mysak, L., Weaver, A., Crucifix, M., Fichefet, T., Loutre, M.-F.,
Weber, S., Alcamo, J., Alexeev, V., Berger, A., Calov, R., Ganopolski, A.,
Goosse, H., Lohmann, G., Lunkeit, F., Mokhov, I., Petoukhov, V., Stone, P.,
and Wang, W.: Earth system models of intermediate complexity: closing the gap
in the spectrum of climate system models, Clim. Dynam., 18, 579–586,
2002. a
Colbourn, G.: Weathering effects on the carbon cycle in an Earth System
Model, PhD thesis, University of East Anglia, https://ueaeprints.uea.ac.uk/id/eprint/34242 (last access: 12 April 2021), 2011. a
Crichton, K. A., Wilson, J. D., Ridgwell, A., and Pearson, P. N.: Calibration of temperature-dependent ocean microbial processes in the cGENIE.muffin (v0.9.13) Earth system model, Geosci. Model Dev., 14, 125–149, https://doi.org/10.5194/gmd-14-125-2021, 2021. a, b
Fanning, A. F. and Weaver, A. J.: An atmospheric energy-moisture balance model:
Climatology, interpentadal climate change, and coupling to an ocean general
circulation model, J. Geophys. Res.-Atmos., 101,
15111–15128, 1996. a
Greene, S., Ridgwell, A., Kirtland Turner, S., Schmidt, D. N., Pälike, H.,
Thomas, E., Greene, L., and Hoogakker, B.: Early Cenozoic decoupling of
climate and carbonate compensation depth trends, PALO, 34, 930–945, 2019. a
Hense, I.: Regulative feedback mechanisms in cyanobacteria-driven systems: a
model study, Mar. Ecol. Prog. Ser., 339, 41–47, 2007. a
Holden, P. B., Edwards, N. R., Fraedrich, K., Kirk, E., Lunkeit, F., and Zhu, X.: PLASIM–GENIE v1.0: a new intermediate complexity AOGCM, Geosci. Model Dev., 9, 3347–3361, https://doi.org/10.5194/gmd-9-3347-2016, 2016. a
Kahru, M., Leppanen, J.-M., and Rud, O.: Cyanobacterial blooms cause heating of the sea surface, Mar. Ecol. Prog. Ser., 101, 1–7, 1993. a
Knutson, T. R. and Tuleya, R. E.: Impact of CO2-induced warming on
simulated hurricane intensity and precipitation: Sensitivity to the choice
of climate model and convective parameterization, J. Climate, 17,
3477–3495, 2004. a
Kowalczuk, P., Sagan, S., Makarewicz, A., Meler, J., Borzycka, K., Zabłocka, M., Zdun, A., Konik, M., Darecki, M., Granskog, M. A., and Pavlov, A. K.: Bio-optical properties of surface waters in the Atlantic water inflow region off Spitsbergen (Arctic Ocean), J. Geophys. Res.-Oceans, 124, 1964–1987, 2019. a
Lengaigne, M., Madec, G., Bopp, L., Menkes, C., Aumont, O., and Cadule, P.:
Bio-physical feedbacks in the Arctic Ocean using an Earth system model, Geophys. Res. Lett., 36, 21, https://doi.org/10.1029/2009GL040145, 2009. a, b, c
Lenton, T., Williamson, M., Edwards, N., Marsh, R., Price, A., Ridgwell, A.,
Shepherd, J., Cox, S., and The GENIE team: Millennial timescale carbon cycle and climate change in an efficient Earth system model, Clim. Dynam., 26, 687, https://doi.org/10.1007/s00382-006-0109-9, 2006. a
Lenton, T., Marsh, R., Price, A., Lunt, D., Aksenov, Y., Annan, J.,
Cooper-Chadwick, T., Cox, S., Edwards, N., Goswami, S., Hargreaves, J. C. P., Harris, P., Jiao, Z., Livina, V. N., Payne, A. J., Rutt, I. C., Shepherd, J. G., Valdes, P. J., Williams, G., Williamson, M. S., and Yool, A.: Effects of atmospheric dynamics and ocean resolution on bi-stability of the thermohaline circulation examined using the Grid ENabled Integrated Earth system modelling (GENIE) framework, Clim. Dynam., 29, 591–613, 2007. a
Liu, X. and Millero, F. J.: The solubility of iron in seawater, Marine
Chemistry, 77, 43–54, 2002. a
Löptien, U., Eden, C., Timmermann, A., and Dietze, H.: Effects of
biologically induced differential heating in an eddy-permitting coupled
ocean-ecosystem model, J. Geophys. Res.-Oceans, 114, C6, https://doi.org/10.1029/2008JC004936, 2009. a, b
Mahowald, N. M., Yoshioka, M., Collins, W. D., Conley, A. J., Fillmore, D. W.,
and Coleman, D. B.: Climate response and radiative forcing from mineral
aerosols during the last glacial maximum, pre-industrial, current and
doubled-carbon dioxide climates, Geophys. Res. Lett., 33, 20, https://doi.org/10.1029/2006GL026126, 2006. a
Manizza, M., Le Quéré, C., Watson, A. J., and Buitenhuis, E. T.: Ocean
biogeochemical response to phytoplankton-light feedback in a global model,
J. Geophys. Res.-Oceans, 113, C10, https://doi.org/10.1029/2007JC004478, 2008. a, b, c
Marsh, R., Müller, S. A., Yool, A., and Edwards, N. R.: Incorporation of the C-GOLDSTEIN efficient climate model into the GENIE framework: “eb_go_gs” configurations of GENIE, Geosci. Model Dev., 4, 957–992, https://doi.org/10.5194/gmd-4-957-2011, 2011. a, b, c, d
Meyer, K., Ridgwell, A., and Payne, J.: The influence of the biological pump on
ocean chemistry: implications for long-term trends in marine redox chemistry,
the global carbon cycle, and marine animal ecosystems, Geobiology, 14,
207–219, 2016. a
Ödalen, M., Nycander, J., Oliver, K. I. C., Brodeau, L., and Ridgwell, A.: The influence of the ocean circulation state on ocean carbon storage and CO2 drawdown potential in an Earth system model, Biogeosciences, 15, 1367–1393, https://doi.org/10.5194/bg-15-1367-2018, 2018. a
Oschlies, A.: Feedbacks of biotically induced radiative heating on upper-ocean heat budget, circulation, and biological production in a coupled
ecosystem-circulation model, J. Geophys. Res.-Oceans, 109, C12, https://doi.org/10.1029/2004JC002430, 2004. a, b, c, d
Paulsen, H., Ilyina, T., Jungclaus, J. H., Six, K. D., and Stemmler, I.: Light absorption by marine cyanobacteria affects tropical climate mean state and variability, Earth Syst. Dynam., 9, 1283–1300, https://doi.org/10.5194/esd-9-1283-2018, 2018. a, b
Reinhard, C. T., Planavsky, N. J., Ward, B. A., Love, G. D., Le Hir, G., and
Ridgwell, A.: The impact of marine nutrient abundance on early eukaryotic
ecosystems, Geobiology, 18, 139–151, 2020. a
Ridgwell, A., Hargreaves, J. C., Edwards, N. R., Annan, J. D., Lenton, T. M., Marsh, R., Yool, A., and Watson, A.: Marine geochemical data assimilation in an efficient Earth System Model of global biogeochemical cycling, Biogeosciences, 4, 87–104, https://doi.org/10.5194/bg-4-87-2007, 2007. a, b, c, d, e
Ridgwell, A., Reinhard, C., van de Velde, S., crem33, Adloff, M., Wilson, J., Ward, B., DomHu, Monteiro, F., and Vervoort, P.: crem33/EcoGENIE_LA: Asselotetal2021_BG (Asselotetal2021_BG), Zenodo [code], https://doi.org/10.5281/zenodo.4733736, 2021. a
Sathyendranath, S., Gouveia, A. D., Shetye, S. R., Ravindran, P., and Platt,
T.: Biological control of surface temperature in the Arabian Sea, Nature, 349, 54–56, 1991. a
Shell, K., Frouin, R., Nakamoto, S., and Somerville, R.: Atmospheric response
to solar radiation absorbed by phytoplankton, J. Geophys.
Res.-Atmos., 108, D15, https://doi.org/10.1029/2003JD003440, 2003. a, b
Sonntag, S. and Hense, I.: Phytoplankton behavior affects ocean mixed layer
dynamics through biological-physical feedback mechanisms, Geophys.
Res. Lett., 38, 15, https://doi.org/10.1029/2011GL048205, 2011. a, b
Tett, P.: The photic zone, in: Light and Life in the Sea, edited by: Herring P. J., Campbell, A. K., Whitfield, M., and Maddock, L., Cambridge University Press, 59–87, ISBN: 9780521392075, 1990. a
Weaver, A. J., Eby, M., Wiebe, E. C., Bitz, C. M., Duffy, P. B., Ewen, T. L.,
Fanning, A. F., Holland, M. M., MacFadyen, A., Matthews, H. D., Meissner, K. J., Saenko, O., Schmittner, A., Wang, H., and Yoshimori, M.: The UVic Earth System Climate Model: Model description, climatology, and applications to past, present and future climates, Atmos. Ocean, 39, 361–428, 2001. a, b, c, d, e, f, g
Wilson, J., Monteiro, F., Schmidt, D., Ward, B., and Ridgwell, A.: Linking
marine plankton ecosystems and climate: a new modeling approach to the warm
early Eocene climate, PALO, 33, 1439–1452, 2018. a
Short summary
Previous studies show that phytoplankton light absorption can warm the atmosphere, but how this warming occurs is still unknown. We compare the importance of air–sea heat versus CO2 flux in the phytoplankton-induced atmospheric warming and determine the main driver. To shed light on this research question, we conduct simulations with a climate model of intermediate complexity. We show that phytoplankton mainly warms the atmosphere by increasing the air–sea CO2 flux.
Previous studies show that phytoplankton light absorption can warm the atmosphere, but how this...
Altmetrics
Final-revised paper
Preprint