Articles | Volume 19, issue 16
https://doi.org/10.5194/bg-19-3791-2022
© Author(s) 2022. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/bg-19-3791-2022
© Author(s) 2022. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Experimental burial diagenesis of aragonitic biocarbonates: from organic matter loss to abiogenic calcite formation
Department of Mineralogy and Petrology, Universidad Complutense de Madrid, Madrid, 28040, Spain
María Simonet Roda
Department of Earth and Environmental Sciences, Ludwig-Maximilians-Universität, Munich, 80333, Germany
Martina Greiner
Department of Earth and Environmental Sciences, Ludwig-Maximilians-Universität, Munich, 80333, Germany
Erika Griesshaber
Department of Earth and Environmental Sciences, Ludwig-Maximilians-Universität, Munich, 80333, Germany
Nelson A. Lagos
Centro de Investigación e Innovación para el Cambio Climático, Universidad Santo Tomás, Santiago, Chile
Sabino Veintemillas-Verdaguer
CORRESPONDING AUTHOR
Instituto de Ciencia de Materiales de Madrid (ICMM, CSIC), Madrid, 28049, Spain
José Manuel Astilleros
Department of Mineralogy and Petrology, Universidad Complutense de Madrid, Madrid, 28040, Spain
Instituto de Geociencias (IGEO), (UCM, CSIC), Madrid, 28040, Spain
Lurdes Fernández-Díaz
CORRESPONDING AUTHOR
Department of Mineralogy and Petrology, Universidad Complutense de Madrid, Madrid, 28040, Spain
Instituto de Geociencias (IGEO), (UCM, CSIC), Madrid, 28040, Spain
Wolfgang W. Schmahl
Department of Earth and Environmental Sciences, Ludwig-Maximilians-Universität, Munich, 80333, Germany
Related authors
No articles found.
Laura A. Casella, Sixin He, Erika Griesshaber, Lourdes Fernández-Díaz, Martina Greiner, Elizabeth M. Harper, Daniel J. Jackson, Andreas Ziegler, Vasileios Mavromatis, Martin Dietzel, Anton Eisenhauer, Sabino Veintemillas-Verdaguer, Uwe Brand, and Wolfgang W. Schmahl
Biogeosciences, 15, 7451–7484, https://doi.org/10.5194/bg-15-7451-2018, https://doi.org/10.5194/bg-15-7451-2018, 2018
Short summary
Short summary
Biogenic carbonates record past environmental conditions. Fossil shell chemistry and microstructure change as metastable biogenic carbonates are replaced by inorganic calcite. Simulated diagenetic alteration at 175 °C of different shell microstructures showed that (nacreous) shell aragonite and calcite were partially replaced by coarse inorganic calcite crystals due to dissolution–reprecipitation reactions. EBSD maps allowed for qualitative assessment of the degree of diagenetic overprint.
Laura A. Casella, Erika Griesshaber, Xiaofei Yin, Andreas Ziegler, Vasileios Mavromatis, Dirk Müller, Ann-Christine Ritter, Dorothee Hippler, Elizabeth M. Harper, Martin Dietzel, Adrian Immenhauser, Bernd R. Schöne, Lucia Angiolini, and Wolfgang W. Schmahl
Biogeosciences, 14, 1461–1492, https://doi.org/10.5194/bg-14-1461-2017, https://doi.org/10.5194/bg-14-1461-2017, 2017
Short summary
Short summary
Mollusc shells record past environments. Fossil shell chemistry and microstructure change as metastable biogenic aragonite transforms to stable geogenic calcite. We simulated this alteration of Arctica islandica shells by hydrothermal treatments. Below 175 °C the shell aragonite survived for weeks. At 175 °C the replacement of the original material starts after 4 days and yields submillimetre-sized calcites preserving the macroscopic morphology as well as the original internal micromorphology.
Related subject area
Paleobiogeoscience: Proxy use, Development & Validation
Disentangling influences of climate variability and lake-system evolution on climate proxies derived from isoprenoid and branched glycerol dialkyl glycerol tetraethers (GDGTs): the 250 kyr Lake Chala record
Electron backscatter diffraction analysis unveils foraminiferal calcite microstructure and processes of diagenetic alteration
Quantifying the δ15N trophic offset in a cold-water scleractinian coral (CWC): implications for the CWC diet and coral δ15N as a marine N cycle proxy
Stable oxygen isotopes of crocodilian tooth enamel allow tracking Plio-Pleistocene evolution of freshwater environments and climate in the Shungura Formation (Turkana Depression, Ethiopia)
Charcoal morphologies and morphometrics of a Eurasian grass-dominated system for robust interpretation of past fuel and fire type
Single-species dinoflagellate cyst carbon isotope fractionation in core-top sediments: environmental controls, CO2 dependency and proxy potential
Past fire dynamics inferred from polycyclic aromatic hydrocarbons and monosaccharide anhydrides in a stalagmite from the archaeological site of Mayapan, Mexico
Examination of the parameters controlling the triple oxygen isotope composition of grass leaf water and phytoliths at a Mediterranean site: a model–data approach
Biomarker characterization of the North Water Polynya, Baffin Bay: implications for local sea ice and temperature proxies
Technical note: No impact of alkenone extraction on foraminiferal stable isotope, trace element and boron isotope geochemistry
Deep-sea stylasterid δ18O and δ13C maps inform sampling scheme for paleotemperature reconstructions
A modern snapshot of the isotopic composition of lacustrine biogenic carbonates – records of seasonal water temperature variability
Performance of temperature and productivity proxies based on long-chain alkane-1, mid-chain diols at test: a 5-year sediment trap record from the Mauritanian upwelling
Validation of a coupled δ2Hn-alkane–δ18Osugar paleohygrometer approach based on a climate chamber experiment
Experimental production of charcoal morphologies to discriminate fuel source and fire type: an example from Siberian taiga
Toward a global calibration for quantifying past oxygenation in oxygen minimum zones using benthic Foraminifera
Calibration of Mg ∕ Ca and Sr ∕ Ca in coastal marine ostracods as a proxy for temperature
Technical note: Accelerate coccolith size separation via repeated centrifugation
Mg∕Ca, Sr∕Ca and stable isotopes from the planktonic foraminifera T. sacculifer: testing a multi-proxy approach for inferring paleotemperature and paleosalinity
Chemical destaining and the delta correction for blue intensity measurements of stained lake subfossil trees
Modern calibration of Poa flabellata (tussac grass) as a new paleoclimate proxy in the South Atlantic
Seawater pH reconstruction using boron isotopes in multiple planktonic foraminifera species with different depth habitats and their potential to constrain pH and pCO2 gradients
Bottom-water deoxygenation at the Peruvian margin during the last deglaciation recorded by benthic foraminifera
The pH dependency of the boron isotopic composition of diatom opal (Thalassiosira weissflogii)
Benthic foraminifera as tracers of brine production in the Storfjorden “sea ice factory”
Evaluation of bacterial glycerol dialkyl glycerol tetraether and 2H–18O biomarker proxies along a central European topsoil transect
Leaf wax n-alkane patterns and compound-specific δ13C of plants and topsoils from semi-arid and arid Mongolia
Organic-carbon-rich sediments: benthic foraminifera as bio-indicators of depositional environments
Strong correspondence between nitrogen isotope composition of foliage and chlorin across a rainfall gradient: implications for paleo-reconstruction of the nitrogen cycle
Environmental and biological controls on Na∕Ca ratios in scleractinian cold-water corals
Depth habitat of the planktonic foraminifera Neogloboquadrina pachyderma in the northern high latitudes explained by sea-ice and chlorophyll concentrations
Temporal variability in foraminiferal morphology and geochemistry at the West Antarctic Peninsula: a sediment trap study
Seasonality of archaeal lipid flux and GDGT-based thermometry in sinking particles of high-latitude oceans: Fram Strait (79° N) and Antarctic Polar Front (50° S)
Long-chain diols in settling particles in tropical oceans: insights into sources, seasonality and proxies
Multi-trace-element sea surface temperature coral reconstruction for the southern Mozambique Channel reveals teleconnections with the tropical Atlantic
Oxygen isotope composition of the final chamber of planktic foraminifera provides evidence of vertical migration and depth-integrated growth
Mg ∕ Ca and δ18O in living planktic foraminifers from the Caribbean, Gulf of Mexico and Florida Straits
Manganese incorporation in living (stained) benthic foraminiferal shells: a bathymetric and in-sediment study in the Gulf of Lions (NW Mediterranean)
Effects of light and temperature on Mg uptake, growth, and calcification in the proxy climate archive Clathromorphum compactum
A systematic look at chromium isotopes in modern shells – implications for paleo-environmental reconstructions
Reviews and syntheses: Revisiting the boron systematics of aragonite and their application to coral calcification
Physico-chemical and biological factors influencing dinoflagellate cyst production in the Cariaco Basin
Effects of alkalinity and salinity at low and high light intensity on hydrogen isotope fractionation of long-chain alkenones produced by Emiliania huxleyi
Interplay of community dynamics, temperature, and productivity on the hydrogen isotope signatures of lipid biomarkers
Benthic foraminiferal Mn / Ca ratios reflect microhabitat preferences
The effects of environment on Arctica islandica shell formation and architecture
Diatoms as a paleoproductivity proxy in the NW Iberian coastal upwelling system (NE Atlantic)
Factors controlling the depth habitat of planktonic foraminifera in the subtropical eastern North Atlantic
The effect of shell secretion rate on Mg / Ca and Sr / Ca ratios in biogenic calcite as observed in a belemnite rostrum
Carbonate “clumped” isotope signatures in aragonitic scleractinian and calcitic gorgonian deep-sea corals
Allix J. Baxter, Francien Peterse, Dirk Verschuren, Aihemaiti Maitituerdi, Nicolas Waldmann, and Jaap S. Sinninghe Damsté
Biogeosciences, 21, 2877–2908, https://doi.org/10.5194/bg-21-2877-2024, https://doi.org/10.5194/bg-21-2877-2024, 2024
Short summary
Short summary
This study investigates the impact of long-term lake-system evolution on the climate signal recorded by glycerol dialkyl glycerol tetraethers (GDGTs), a popular biomarker in paleoclimate research. It compares downcore changes in GDGTs in the 250 000 year sediment sequence of Lake Chala (Kenya/Tanzania) to independent data for lake mixing and water-column chemistry. These factors influence the GDGT proxies in the earliest depositional phases (before ~180 ka), confounding the climate signal.
Frances A. Procter, Sandra Piazolo, Eleanor H. John, Richard Walshaw, Paul N. Pearson, Caroline H. Lear, and Tracy Aze
Biogeosciences, 21, 1213–1233, https://doi.org/10.5194/bg-21-1213-2024, https://doi.org/10.5194/bg-21-1213-2024, 2024
Short summary
Short summary
This study uses novel techniques to look at the microstructure of planktonic foraminifera (single-celled marine organisms) fossils, to further our understanding of how they form their hard exterior shells and how the microstructure and chemistry of these shells can change as a result of processes that occur after deposition on the seafloor. Understanding these processes is of critical importance for using planktonic foraminifera for robust climate and environmental reconstructions of the past.
Josie L. Mottram, Anne M. Gothmann, Maria G. Prokopenko, Austin Cordova, Veronica Rollinson, Katie Dobkowski, and Julie Granger
Biogeosciences, 21, 1071–1091, https://doi.org/10.5194/bg-21-1071-2024, https://doi.org/10.5194/bg-21-1071-2024, 2024
Short summary
Short summary
Knowledge of ancient ocean N cycling can help illuminate past climate change. Using field and lab studies, this work ground-truths a promising proxy for marine N cycling, the N isotope composition of cold-water coral (CWC) skeletons. Our results estimate N turnover in CWC tissue; quantify the isotope effects between CWC tissue, diet, and skeleton; and suggest that CWCs possibly feed mainly on metazoan zooplankton, suggesting that the marine N proxy may be sensitive to the food web structure.
Axelle Gardin, Emmanuelle Pucéat, Géraldine Garcia, Jean-Renaud Boisserie, Adélaïde Euriat, Michael M. Joachimski, Alexis Nutz, Mathieu Schuster, and Olga Otero
Biogeosciences, 21, 437–454, https://doi.org/10.5194/bg-21-437-2024, https://doi.org/10.5194/bg-21-437-2024, 2024
Short summary
Short summary
We introduce a novel approach using stable oxygen isotopes from crocodilian fossil teeth to unravel palaeohydrological changes in past continental contexts. Applying it to the Plio-Pleistocene Ethiopian Shungura Formation, we found a significant increase in δ18O in the last 3 million years, likely due to monsoonal shifts and reduced rainfall, and that the local diversity of waterbodies (lakes, rivers, ponds) became restricted.
Angelica Feurdean, Richard S. Vachula, Diana Hanganu, Astrid Stobbe, and Maren Gumnior
Biogeosciences, 20, 5069–5085, https://doi.org/10.5194/bg-20-5069-2023, https://doi.org/10.5194/bg-20-5069-2023, 2023
Short summary
Short summary
This paper presents novel results of laboratory-produced charcoal forms from various grass, forb and shrub taxa from the Eurasian steppe to facilitate more robust interpretations of fuel sources and fire types in grassland-dominated ecosystems. Advancements in identifying fuel sources and changes in fire types make charcoal analysis relevant to studies of plant evolution and fire management.
Joost Frieling, Linda van Roij, Iris Kleij, Gert-Jan Reichart, and Appy Sluijs
Biogeosciences, 20, 4651–4668, https://doi.org/10.5194/bg-20-4651-2023, https://doi.org/10.5194/bg-20-4651-2023, 2023
Short summary
Short summary
We present a first species-specific evaluation of marine core-top dinoflagellate cyst carbon isotope fractionation (εp) to assess natural pCO2 dependency on εp and explore its geological deep-time paleo-pCO2 proxy potential. We find that εp differs between genera and species and that in Operculodinium centrocarpum, εp is controlled by pCO2 and nutrients. Our results highlight the added value of δ13C analyses of individual micrometer-scale sedimentary organic carbon particles.
Julia Homann, Niklas Karbach, Stacy A. Carolin, Daniel H. James, David Hodell, Sebastian F. M. Breitenbach, Ola Kwiecien, Mark Brenner, Carlos Peraza Lope, and Thorsten Hoffmann
Biogeosciences, 20, 3249–3260, https://doi.org/10.5194/bg-20-3249-2023, https://doi.org/10.5194/bg-20-3249-2023, 2023
Short summary
Short summary
Cave stalagmites contain substances that can be used to reconstruct past changes in local and regional environmental conditions. We used two classes of biomarkers (polycyclic aromatic hydrocarbons and monosaccharide anhydrides) to detect the presence of fire and to also explore changes in fire regime (e.g. fire frequency, intensity, and fuel source). We tested our new method on a stalagmite from Mayapan, a large Maya city on the Yucatán Peninsula.
Claudia Voigt, Anne Alexandre, Ilja M. Reiter, Jean-Philippe Orts, Christine Vallet-Coulomb, Clément Piel, Jean-Charles Mazur, Julie C. Aleman, Corinne Sonzogni, Helene Miche, and Jérôme Ogée
Biogeosciences, 20, 2161–2187, https://doi.org/10.5194/bg-20-2161-2023, https://doi.org/10.5194/bg-20-2161-2023, 2023
Short summary
Short summary
Data on past relative humidity (RH) ARE needed to improve its representation in Earth system models. A novel isotope parameter (17O-excess) of plant silica has been developed to quantify past RH. Using comprehensive monitoring and novel methods, we show how environmental and plant physiological parameters influence the 17O-excess of plant silica and leaf water, i.e. its source water. The insights gained from this study will help to improve estimates of RH from fossil plant silica deposits.
David J. Harning, Brooke Holman, Lineke Woelders, Anne E. Jennings, and Julio Sepúlveda
Biogeosciences, 20, 229–249, https://doi.org/10.5194/bg-20-229-2023, https://doi.org/10.5194/bg-20-229-2023, 2023
Short summary
Short summary
In order to better reconstruct the geologic history of the North Water Polynya, we provide modern validations and calibrations of lipid biomarker proxies in Baffin Bay. We find that sterols, rather than HBIs, most accurately capture the current extent of the North Water Polynya and will be a valuable tool to reconstruct its past presence or absence. Our local temperature calibrations for GDGTs and OH-GDGTs reduce the uncertainty present in global temperature calibrations.
Jessica G. M. Crumpton-Banks, Thomas Tanner, Ivan Hernández Almeida, James W. B. Rae, and Heather Stoll
Biogeosciences, 19, 5633–5644, https://doi.org/10.5194/bg-19-5633-2022, https://doi.org/10.5194/bg-19-5633-2022, 2022
Short summary
Short summary
Past ocean carbon is reconstructed using proxies, but it is unknown whether preparing ocean sediment for one proxy might damage the data given by another. We have tested whether the extraction of an organic proxy archive from sediment samples impacts the geochemistry of tiny shells also within the sediment. We find no difference in shell geochemistry between samples which come from treated and untreated sediment. This will help us to maximize scientific return from valuable sediment samples.
Theresa M. King and Brad E. Rosenheim
Biogeosciences Discuss., https://doi.org/10.5194/bg-2022-180, https://doi.org/10.5194/bg-2022-180, 2022
Preprint under review for BG
Short summary
Short summary
Corals can record ocean properties such as temperature in their skeletons. These records are useful for where and when we have no instrumental record like in the distant past. However, coral growth must be understood to interpret these records. Here, we analyze slices of a branching deep sea coral from Antarctica to determine how to best sample these corals for past climate work. We recommend sampling from the innermost portion of coral skeleton for accurate temperature reconstructions.
Inga Labuhn, Franziska Tell, Ulrich von Grafenstein, Dan Hammarlund, Henning Kuhnert, and Bénédicte Minster
Biogeosciences, 19, 2759–2777, https://doi.org/10.5194/bg-19-2759-2022, https://doi.org/10.5194/bg-19-2759-2022, 2022
Short summary
Short summary
This study presents the isotopic composition of recent biogenic carbonates from several lacustrine species which calcify during different times of the year. The authors demonstrate that when biological offsets are corrected, the dominant cause of differences between species is the seasonal variation in temperature-dependent fractionation of oxygen isotopes. Consequently, such carbonates from lake sediments can provide proxy records of seasonal water temperature changes in the past.
Gerard J. M. Versteegh, Karin A. F. Zonneveld, Jens Hefter, Oscar E. Romero, Gerhard Fischer, and Gesine Mollenhauer
Biogeosciences, 19, 1587–1610, https://doi.org/10.5194/bg-19-1587-2022, https://doi.org/10.5194/bg-19-1587-2022, 2022
Short summary
Short summary
A 5-year record of long-chain mid-chain diol export flux and composition is presented with a 1- to 3-week resolution sediment trap CBeu (in the NW African upwelling). All environmental parameters as well as the diol composition are dominated by the seasonal cycle, albeit with different phase relations for temperature and upwelling. Most diol-based proxies are dominated by upwelling. The long-chain diol index reflects temperatures of the oligotrophic summer sea surface.
Johannes Hepp, Christoph Mayr, Kazimierz Rozanski, Imke Kathrin Schäfer, Mario Tuthorn, Bruno Glaser, Dieter Juchelka, Willibald Stichler, Roland Zech, and Michael Zech
Biogeosciences, 18, 5363–5380, https://doi.org/10.5194/bg-18-5363-2021, https://doi.org/10.5194/bg-18-5363-2021, 2021
Short summary
Short summary
Deriving more quantitative climate information like relative air humidity is one of the key challenges in paleostudies. Often only qualitative reconstructions can be done when single-biomarker-isotope data are derived from a climate archive. However, the coupling of hemicellulose-derived sugar with leaf-wax-derived n-alkane isotope results has the potential to overcome this limitation and allow a quantitative relative air humidity reconstruction.
Angelica Feurdean
Biogeosciences, 18, 3805–3821, https://doi.org/10.5194/bg-18-3805-2021, https://doi.org/10.5194/bg-18-3805-2021, 2021
Short summary
Short summary
This study characterized the diversity of laboratory-produced charcoal morphological features of various fuel types from Siberia at different temperatures. The results obtained improve the attribution of charcoal particles to fuel types and fire characteristics. This work also provides recommendations for the application of this information to refine the past wildfire history.
Martin Tetard, Laetitia Licari, Ekaterina Ovsepyan, Kazuyo Tachikawa, and Luc Beaufort
Biogeosciences, 18, 2827–2841, https://doi.org/10.5194/bg-18-2827-2021, https://doi.org/10.5194/bg-18-2827-2021, 2021
Short summary
Short summary
Oxygen minimum zones are oceanic regions almost devoid of dissolved oxygen and are currently expanding due to global warming. Investigation of their past behaviour will allow better understanding of these areas and better prediction of their future evolution. A new method to estimate past [O2] was developed based on morphometric measurements of benthic foraminifera. This method and two other approaches based on foraminifera assemblages and porosity were calibrated using 45 core tops worldwide.
Maximiliano Rodríguez and Christelle Not
Biogeosciences, 18, 1987–2001, https://doi.org/10.5194/bg-18-1987-2021, https://doi.org/10.5194/bg-18-1987-2021, 2021
Short summary
Short summary
Mg/Ca in calcium carbonate shells of marine organisms such as foraminifera and ostracods has been used as a proxy to reconstruct water temperature. Here we provide new Mg/Ca–temperature calibrations for two shallow marine species of ostracods. We show that the water temperature in spring produces the best calibrations, which suggests the potential use of ostracod shells to reconstruct this parameter at a seasonal scale.
Hongrui Zhang, Chuanlian Liu, Luz María Mejía, and Heather Stoll
Biogeosciences, 18, 1909–1916, https://doi.org/10.5194/bg-18-1909-2021, https://doi.org/10.5194/bg-18-1909-2021, 2021
Delphine Dissard, Gert Jan Reichart, Christophe Menkes, Morgan Mangeas, Stephan Frickenhaus, and Jelle Bijma
Biogeosciences, 18, 423–439, https://doi.org/10.5194/bg-18-423-2021, https://doi.org/10.5194/bg-18-423-2021, 2021
Short summary
Short summary
Results from a data set acquired from living foraminifera T. sacculifer collected from surface waters are presented, allowing us to establish a new Mg/Ca–Sr/Ca–temperature equation improving temperature reconstructions. When combining equations, δ18Ow can be reconstructed with a precision of ± 0.5 ‰, while successive reconstructions involving Mg/Ca and δ18Oc preclude salinity reconstruction with a precision better than ± 1.69. A new direct linear fit to reconstruct salinity could be established.
Feng Wang, Dominique Arseneault, Étienne Boucher, Shulong Yu, Steeven Ouellet, Gwenaëlle Chaillou, Ann Delwaide, and Lily Wang
Biogeosciences, 17, 4559–4570, https://doi.org/10.5194/bg-17-4559-2020, https://doi.org/10.5194/bg-17-4559-2020, 2020
Short summary
Short summary
Wood stain is challenging the use of the blue intensity technique for dendroclimatic reconstructions. Using stained subfossil trees from eastern Canadian lakes, we compared chemical destaining approaches with the
delta bluemathematical correction of blue intensity data. Although no chemical treatment was completely efficient, the delta blue method is unaffected by the staining problem and thus is promising for climate reconstructions based on lake subfossil material.
Dulcinea V. Groff, David G. Williams, and Jacquelyn L. Gill
Biogeosciences, 17, 4545–4557, https://doi.org/10.5194/bg-17-4545-2020, https://doi.org/10.5194/bg-17-4545-2020, 2020
Short summary
Short summary
Tussock grasses that grow along coastlines of the Falkland Islands are slow to decay and build up thick peat layers over thousands of years. Grass fragments found in ancient peat can be used to reconstruct past climate because grasses can preserve a record of growing conditions in their leaves. We found that modern living tussock grasses in the Falkland Islands reliably record temperature and humidity in their leaves, and the peat they form can be used to understand past climate change.
Maxence Guillermic, Sambuddha Misra, Robert Eagle, Alexandra Villa, Fengming Chang, and Aradhna Tripati
Biogeosciences, 17, 3487–3510, https://doi.org/10.5194/bg-17-3487-2020, https://doi.org/10.5194/bg-17-3487-2020, 2020
Short summary
Short summary
Boron isotope ratios (δ11B) of foraminifera are a promising proxy for seawater pH and can be used to constrain pCO2. In this study, we derived calibrations for new foraminiferal taxa which extend the application of the boron isotope proxy. We discuss the origin of different δ11B signatures in species and also discuss the potential of using multispecies δ11B analyses to constrain vertical pH and pCO2 gradients in ancient water columns to shed light on biogeochemical carbon cycling in the past.
Zeynep Erdem, Joachim Schönfeld, Anthony E. Rathburn, Maria-Elena Pérez, Jorge Cardich, and Nicolaas Glock
Biogeosciences, 17, 3165–3182, https://doi.org/10.5194/bg-17-3165-2020, https://doi.org/10.5194/bg-17-3165-2020, 2020
Short summary
Short summary
Recent observations from today’s oceans revealed that oxygen concentrations are decreasing, and oxygen minimum zones are expanding together with current climate change. With the aim of understanding past climatic events and their relationship with oxygen content, we looked at the fossils, called benthic foraminifera, preserved in the sediment archives from the Peruvian margin and quantified the bottom-water oxygen content for the last 22 000 years.
Hannah K. Donald, Gavin L. Foster, Nico Fröhberg, George E. A. Swann, Alex J. Poulton, C. Mark Moore, and Matthew P. Humphreys
Biogeosciences, 17, 2825–2837, https://doi.org/10.5194/bg-17-2825-2020, https://doi.org/10.5194/bg-17-2825-2020, 2020
Short summary
Short summary
The boron isotope pH proxy is increasingly being used to reconstruct ocean pH in the past. Here we detail a novel analytical methodology for measuring the boron isotopic composition (δ11B) of diatom opal and apply this to the study of the diatom Thalassiosira weissflogii grown in culture over a range of pH. To our knowledge this is the first study of its kind and provides unique insights into the way in which diatoms incorporate boron and their potential as archives of palaeoclimate records.
Eleonora Fossile, Maria Pia Nardelli, Arbia Jouini, Bruno Lansard, Antonio Pusceddu, Davide Moccia, Elisabeth Michel, Olivier Péron, Hélène Howa, and Meryem Mojtahid
Biogeosciences, 17, 1933–1953, https://doi.org/10.5194/bg-17-1933-2020, https://doi.org/10.5194/bg-17-1933-2020, 2020
Short summary
Short summary
This study focuses on benthic foraminiferal distribution in an Arctic fjord characterised by continuous sea ice production during winter and the consequent cascading of salty and corrosive waters (brine) to the seabed. The inner fjord is dominated by calcareous species (C). In the central deep basins, where brines are persistent, calcareous foraminifera are dissolved and agglutinated (A) dominate. The high A/C ratio is suggested as a proxy for brine persistence and sea ice production.
Johannes Hepp, Imke Kathrin Schäfer, Verena Lanny, Jörg Franke, Marcel Bliedtner, Kazimierz Rozanski, Bruno Glaser, Michael Zech, Timothy Ian Eglinton, and Roland Zech
Biogeosciences, 17, 741–756, https://doi.org/10.5194/bg-17-741-2020, https://doi.org/10.5194/bg-17-741-2020, 2020
Julian Struck, Marcel Bliedtner, Paul Strobel, Jens Schumacher, Enkhtuya Bazarradnaa, and Roland Zech
Biogeosciences, 17, 567–580, https://doi.org/10.5194/bg-17-567-2020, https://doi.org/10.5194/bg-17-567-2020, 2020
Short summary
Short summary
We present leaf wax n-alkanes and their compound-specific (CS) δ13C isotopes from semi-arid and/or arid Mongolia to test their potential for paleoenvironmental reconstructions. Plants and topsoils were analysed and checked for climatic control. Chain-length variations are distinct between grasses and Caragana, which are not biased by climate. However CS δ13C is strongly correlated to climate, so n-alkanes and their CS δ13C show great potential for paleoenvironmental reconstruction in Mongolia.
Elena Lo Giudice Cappelli, Jessica Louise Clarke, Craig Smeaton, Keith Davidson, and William Edward Newns Austin
Biogeosciences, 16, 4183–4199, https://doi.org/10.5194/bg-16-4183-2019, https://doi.org/10.5194/bg-16-4183-2019, 2019
Short summary
Short summary
Fjords are known sinks of organic carbon (OC); however, little is known about the long-term fate of the OC stored in these sediments. The reason for this knowledge gap is the post-depositional degradation of OC. This study uses benthic foraminifera (microorganisms with calcite shells) to discriminate between post-depositional OC degradation and actual OC burial and accumulation in fjordic sediments, as foraminifera would only preserve the latter information in their assemblage composition.
Sara K. E. Goulden, Naohiko Ohkouchi, Katherine H. Freeman, Yoshito Chikaraishi, Nanako O. Ogawa, Hisami Suga, Oliver Chadwick, and Benjamin Z. Houlton
Biogeosciences, 16, 3869–3882, https://doi.org/10.5194/bg-16-3869-2019, https://doi.org/10.5194/bg-16-3869-2019, 2019
Short summary
Short summary
We investigate whether soil organic compounds preserve information about nitrogen availability to plants. We isolate chlorophyll degradation products in leaves, litter, and soil and explore possible species and climate effects on preservation and interpretation. We find that compound-specific nitrogen isotope measurements in soil have potential as a new tool to reconstruct changes in nitrogen cycling on a landscape over time, avoiding issues that have limited other proxies.
Nicolai Schleinkofer, Jacek Raddatz, André Freiwald, David Evans, Lydia Beuck, Andres Rüggeberg, and Volker Liebetrau
Biogeosciences, 16, 3565–3582, https://doi.org/10.5194/bg-16-3565-2019, https://doi.org/10.5194/bg-16-3565-2019, 2019
Short summary
Short summary
In this study we tried to correlate Na / Ca ratios from cold-water corals with environmental parameters such as salinity, temperature and pH. We do not observe a correlation between Na / Ca ratios and seawater salinity, but we do observe a strong correlation with temperature. Na / Ca data from warm-water corals (Porites spp.) and bivalves (Mytilus edulis) support this correlation, indicating that similar controls on the incorporation of sodium exist in these aragonitic organisms.
Mattia Greco, Lukas Jonkers, Kerstin Kretschmer, Jelle Bijma, and Michal Kucera
Biogeosciences, 16, 3425–3437, https://doi.org/10.5194/bg-16-3425-2019, https://doi.org/10.5194/bg-16-3425-2019, 2019
Short summary
Short summary
To be able to interpret the paleoecological signal contained in N. pachyderma's shells, its habitat depth must be known. Our investigation on 104 density profiles of this species from the Arctic and North Atlantic shows that specimens reside closer to the surface when sea-ice and/or surface chlorophyll concentrations are high. This is in contrast with previous investigations that pointed at the position of the deep chlorophyll maximum as the main driver of N. pachyderma vertical distribution.
Anna Mikis, Katharine R. Hendry, Jennifer Pike, Daniela N. Schmidt, Kirsty M. Edgar, Victoria Peck, Frank J. C. Peeters, Melanie J. Leng, Michael P. Meredith, Chloe L. C. Jones, Sharon Stammerjohn, and Hugh Ducklow
Biogeosciences, 16, 3267–3282, https://doi.org/10.5194/bg-16-3267-2019, https://doi.org/10.5194/bg-16-3267-2019, 2019
Short summary
Short summary
Antarctic marine calcifying organisms are threatened by regional climate change and ocean acidification. Future projections of regional carbonate production are challenging due to the lack of historical data combined with complex climate variability. We present a 6-year record of flux, morphology and geochemistry of an Antarctic planktonic foraminifera, which shows that their growth is most sensitive to sea ice dynamics and is linked with the El Niño–Southern Oscillation.
Eunmi Park, Jens Hefter, Gerhard Fischer, Morten Hvitfeldt Iversen, Simon Ramondenc, Eva-Maria Nöthig, and Gesine Mollenhauer
Biogeosciences, 16, 2247–2268, https://doi.org/10.5194/bg-16-2247-2019, https://doi.org/10.5194/bg-16-2247-2019, 2019
Short summary
Short summary
We analyzed GDGT-based proxy temperatures in the polar oceans. In the eastern Fram Strait (79° N), the nutrient distribution may determine the depth habit of Thaumarchaeota and thus the proxy temperature. In the Antarctic Polar Front (50° S), the contribution of Euryarchaeota or the nonlinear correlation between the proxy values and temperatures may cause the warm biases of the proxy temperatures relative to SSTs.
Marijke W. de Bar, Jenny E. Ullgren, Robert C. Thunnell, Stuart G. Wakeham, Geert-Jan A. Brummer, Jan-Berend W. Stuut, Jaap S. Sinninghe Damsté, and Stefan Schouten
Biogeosciences, 16, 1705–1727, https://doi.org/10.5194/bg-16-1705-2019, https://doi.org/10.5194/bg-16-1705-2019, 2019
Short summary
Short summary
We analyzed sediment traps from the Cariaco Basin, the tropical Atlantic and the Mozambique Channel to evaluate seasonal imprints in the concentrations and fluxes of long-chain diols (LDIs), in addition to the long-chain diol index proxy (sea surface temperature proxy) and the diol index (upwelling indicator). Despite significant degradation, LDI-derived temperatures were very similar for the sediment traps and seafloor sediments, and corresponded to annual mean sea surface temperatures.
Jens Zinke, Juan P. D'Olivo, Christoph J. Gey, Malcolm T. McCulloch, J. Henrich Bruggemann, Janice M. Lough, and Mireille M. M. Guillaume
Biogeosciences, 16, 695–712, https://doi.org/10.5194/bg-16-695-2019, https://doi.org/10.5194/bg-16-695-2019, 2019
Short summary
Short summary
Here we report seasonally resolved sea surface temperature (SST) reconstructions for the southern Mozambique Channel in the SW Indian Ocean, a region located along the thermohaline ocean surface circulation route, based on multi-trace-element temperature proxy records preserved in two Porites sp. coral cores for the past 42 years. Particularly, we show the suitability of both separate and combined Sr / Ca and Li / Mg proxies for improved multielement SST reconstructions.
Hilde Pracht, Brett Metcalfe, and Frank J. C. Peeters
Biogeosciences, 16, 643–661, https://doi.org/10.5194/bg-16-643-2019, https://doi.org/10.5194/bg-16-643-2019, 2019
Short summary
Short summary
In palaeoceanography the shells of single-celled foraminifera are routinely used as proxies to reconstruct the temperature, salinity and circulation of the ocean in the past. Traditionally a number of specimens were pooled for a single stable isotope measurement; however, technical advances now mean that a single shell or chamber of a shell can be measured individually. Three different hypotheses regarding foraminiferal biology and ecology were tested using this approach.
Anna Jentzen, Dirk Nürnberg, Ed C. Hathorne, and Joachim Schönfeld
Biogeosciences, 15, 7077–7095, https://doi.org/10.5194/bg-15-7077-2018, https://doi.org/10.5194/bg-15-7077-2018, 2018
Shauna Ní Fhlaithearta, Christophe Fontanier, Frans Jorissen, Aurélia Mouret, Adriana Dueñas-Bohórquez, Pierre Anschutz, Mattias B. Fricker, Detlef Günther, Gert J. de Lange, and Gert-Jan Reichart
Biogeosciences, 15, 6315–6328, https://doi.org/10.5194/bg-15-6315-2018, https://doi.org/10.5194/bg-15-6315-2018, 2018
Short summary
Short summary
This study looks at how foraminifera interact with their geochemical environment in the seabed. We focus on the incorporation of the trace metal manganese (Mn), with the aim of developing a tool to reconstruct past pore water profiles. Manganese concentrations in foraminifera are investigated relative to their ecological preferences and geochemical environment. This study demonstrates that Mn in foraminiferal tests is a promising tool to reconstruct oxygen conditions in the seabed.
Siobhan Williams, Walter Adey, Jochen Halfar, Andreas Kronz, Patrick Gagnon, David Bélanger, and Merinda Nash
Biogeosciences, 15, 5745–5759, https://doi.org/10.5194/bg-15-5745-2018, https://doi.org/10.5194/bg-15-5745-2018, 2018
Robert Frei, Cora Paulukat, Sylvie Bruggmann, and Robert M. Klaebe
Biogeosciences, 15, 4905–4922, https://doi.org/10.5194/bg-15-4905-2018, https://doi.org/10.5194/bg-15-4905-2018, 2018
Short summary
Short summary
The reconstruction of paleo-redox conditions of seawater has the potential to link to climatic changes on land and therefore to contribute to our understanding of past climate change. The redox-sensitive chromium isotope system is applied to marine calcifiers in order to characterize isotope offsets that result from vital processes during calcification processes and which can be eventually used in fossil equivalents to reconstruct past seawater compositions.
Thomas M. DeCarlo, Michael Holcomb, and Malcolm T. McCulloch
Biogeosciences, 15, 2819–2834, https://doi.org/10.5194/bg-15-2819-2018, https://doi.org/10.5194/bg-15-2819-2018, 2018
Short summary
Short summary
Understanding the mechanisms of coral calcification is limited by the isolation of the calcifying environment. The boron systematics (B / Ca and δ11B) of aragonite have recently been developed as a proxy for the carbonate chemistry of the calcifying fluid, but a variety of approaches have been utilized. We assess the available experimental B / Ca partitioning data and present a computer code for deriving calcifying fluid carbonate chemistry from the boron systematics of coral skeletons.
Manuel Bringué, Robert C. Thunell, Vera Pospelova, James L. Pinckney, Oscar E. Romero, and Eric J. Tappa
Biogeosciences, 15, 2325–2348, https://doi.org/10.5194/bg-15-2325-2018, https://doi.org/10.5194/bg-15-2325-2018, 2018
Short summary
Short summary
We document 2.5 yr of dinoflagellate cyst production in the Cariaco Basin using a sediment trap record. Each species' production pattern is interpreted in the context of the physico-chemical (e.g., temperature, nutrients) and biological (other planktonic groups) environment. Most species respond positively to upwelling, but seem to be negatively impacted by an El Niño event with a 1-year lag. This work helps understanding dinoflagellate ecology and interpreting fossil assemblages in sediments.
Gabriella M. Weiss, Eva Y. Pfannerstill, Stefan Schouten, Jaap S. Sinninghe Damsté, and Marcel T. J. van der Meer
Biogeosciences, 14, 5693–5704, https://doi.org/10.5194/bg-14-5693-2017, https://doi.org/10.5194/bg-14-5693-2017, 2017
Short summary
Short summary
Algal-derived compounds allow us to make assumptions about environmental conditions in the past. In order to better understand how organisms record environmental conditions, we grew microscopic marine algae at different light intensities, salinities, and alkalinities in a temperature-controlled environment. We determined how these environmental parameters affected specific algal-derived compounds, especially their relative deuterium content, which seems to be mainly affected by salinity.
S. Nemiah Ladd, Nathalie Dubois, and Carsten J. Schubert
Biogeosciences, 14, 3979–3994, https://doi.org/10.5194/bg-14-3979-2017, https://doi.org/10.5194/bg-14-3979-2017, 2017
Short summary
Short summary
Hydrogen isotopes of lipids provide valuable information about microbial activity, climate, and environmental stress. We show that heavy hydrogen in fatty acids declines from spring to summer in a nutrient-rich and a nutrient-poor lake and that the effect is nearly 3 times as big in the former. This effect is likely a combination of increased biomass from algae, warmer temperatures, and higher algal growth rates.
Karoliina A. Koho, Lennart J. de Nooijer, Christophe Fontanier, Takashi Toyofuku, Kazumasa Oguri, Hiroshi Kitazato, and Gert-Jan Reichart
Biogeosciences, 14, 3067–3082, https://doi.org/10.5194/bg-14-3067-2017, https://doi.org/10.5194/bg-14-3067-2017, 2017
Short summary
Short summary
Here we report Mn / Ca ratios in living benthic foraminifera from the NE Japan margin. The results show that the Mn incorporation directly reflects the environment where the foraminifera calcify. Foraminifera that live deeper in sediment, under greater redox stress, generally incorporate more Mn into their carbonate skeletons. As such, foraminifera living close to the Mn reduction zone in sediment appear promising tools for paleoceanographic reconstructions of sedimentary redox conditions.
Stefania Milano, Gernot Nehrke, Alan D. Wanamaker Jr., Irene Ballesta-Artero, Thomas Brey, and Bernd R. Schöne
Biogeosciences, 14, 1577–1591, https://doi.org/10.5194/bg-14-1577-2017, https://doi.org/10.5194/bg-14-1577-2017, 2017
Diana Zúñiga, Celia Santos, María Froján, Emilia Salgueiro, Marta M. Rufino, Francisco De la Granda, Francisco G. Figueiras, Carmen G. Castro, and Fátima Abrantes
Biogeosciences, 14, 1165–1179, https://doi.org/10.5194/bg-14-1165-2017, https://doi.org/10.5194/bg-14-1165-2017, 2017
Short summary
Short summary
Diatoms are one of the most important primary producers in highly productive coastal regions. Their silicified valves are susceptible to escape from the upper water column and be preserved in the sediment record, and thus are frequently used to reconstruct environmental conditions in the past from sediment cores. Here, we assess how water column diatom’s community in the NW Iberian coastal upwelling system is seasonally transferred from the surface to the seafloor sediments.
Andreia Rebotim, Antje H. L. Voelker, Lukas Jonkers, Joanna J. Waniek, Helge Meggers, Ralf Schiebel, Igaratza Fraile, Michael Schulz, and Michal Kucera
Biogeosciences, 14, 827–859, https://doi.org/10.5194/bg-14-827-2017, https://doi.org/10.5194/bg-14-827-2017, 2017
Short summary
Short summary
Planktonic foraminifera species depth habitat remains poorly constrained and the existing conceptual models are not sufficiently tested by observational data. Here we present a synthesis of living planktonic foraminifera abundance data in the subtropical eastern North Atlantic from vertical plankton tows. We also test potential environmental factors influencing the species depth habitat and investigate yearly or lunar migration cycles. These findings may impact paleoceanographic studies.
Clemens Vinzenz Ullmann and Philip A. E. Pogge von Strandmann
Biogeosciences, 14, 89–97, https://doi.org/10.5194/bg-14-89-2017, https://doi.org/10.5194/bg-14-89-2017, 2017
Short summary
Short summary
This study documents how much control growth rate has on the chemical composition of fossil shell material. Using a series of chemical analyses of the fossil hard part of a belemnite, an extinct marine predator, a clear connection between the rate of calcite formation and its magnesium and strontium contents was found. These findings provide further insight into biomineralization processes and help better understand chemical signatures of fossils as proxies for palaeoenvironmental conditions.
Justine Kimball, Robert Eagle, and Robert Dunbar
Biogeosciences, 13, 6487–6505, https://doi.org/10.5194/bg-13-6487-2016, https://doi.org/10.5194/bg-13-6487-2016, 2016
Short summary
Short summary
Deep-sea corals are a potentially valuable archive of temperature and ocean chemistry. We analyzed clumped isotope signatures (Δ47) in live-collected aragonitic scleractinian and high-Mg calcitic gorgonian deep-sea corals and compared results to published data and found offsets between taxa. The observed patterns in deep-sea corals may record distinct mineral equilibrium signatures due to very slow growth rates, kinetic isotope effects, and/or variable acid digestion fractionation factors.
Cited articles
Arrhenius, S.:
Über die Reaktionsgeschwindigkeit bei der Inversion von Rohrzucker durch Säuren, Z. Phys. Chem., 4, 226–248, 1889.
Astilleros, J. M., Pina, C. M., Fernández-Diaz, L., and Putnis, A.:
Metastable phenomena on calcite {1014} surfaces growing from Sr2+–Ca2+– aqueous solutions, Chem. Geol., 193, 93–107, 2003.
Astilleros, J. M., Fernández-Díaz, L., and Putnis, A.:
The role of magnesium in the growth of calcite: An AFM study, Chem. Geol., 271, 52–58, 2010.
Baronnet A.:
Ostwald ripening: The case of calcite and mica, Estud. Geol.-Madrid, 38, 185–198, 1982.
Bénézeth, P., Palmer, D. A., and Wesolowski, D. J.:
Dissociation quotients for citric acid in aqueous sodium chloride media to 150 ∘C, J. Solution Chem., 26, 63–84, 1997.
Bernard, S., Daval, D., Ackerer, P., Pont, S., and Meibom, A.:
Burial-induced oxygen-isotope re-equilibration of fossil foraminifera explains ocean paleotemperature paradoxes, Nat. Commun., 8, 1–10. 2017.
Berner, R. A.:
The role of magnesium in the crystal growth of calcite and aragonite from sea water, Geochim. Cosmochim. Ac., 39, 489–504, 1975.
Bischoff, J. L.:
Kinetics of calcite nucleation: magnesium ion inhibition and ionic strength catalysis, J. Geophys. Res., 73, 3315–3322, 1968.
Bischoff, J. L.:
Temperature controls on aragonite-calcite transformation in aqueous solution, Am. Mineral., 54, 149–155, 1969.
Bischoff, W. D., Mackenzie, F. T., and Bishop, F. C.:
Stabilities of synthetic magnesian calcites in aqueous solution: Comparison with biogenic materials, Geochim. Cosmochim. Ac., 51, 1413–1423, 1987.
Bischoff, W. D., Bertram, M. A., Mackenzie, F. T., and Bishop, F. C.:
Diagenetic stabilization pathways of magnesian calcites, Carbonate. Evaporite., 8, 82–89, 1993.
Busenberg, E. and Plummer, L. N.:
Kinetic and thermodynamic factors controlling the distribution of and Na+ in calcites and selected aragonites, Geochim. Cosmochim. Ac., 49, 713–725. 1985.
Brand, U.:
Biogeochemistry of Late Palaeozoic North American brachiopods and secular variation of seawater composition, Biogeochemistry, 7, 159–193, 1989.
Cardew, P. T. and Davey, R. J.:
The kinetics of solvent-mediated phase transformations, P. R. Soc. A., 398, 415–428, 1985.
Carter, J. G. and Clark II, G. R.:
Classification and phylogenetic significance of molluscan shell microstructure, Studies in Geology, Notes for a Short Course, 13, 50–71, https://doi.org/10.1017/S0271164800001093, 1985.
Casella, L. A., Griesshaber, E., Yin, X., Ziegler, A., Mavromatis, V., Müller, D., Ritter, A.-C., Hippler, D., Harper, E. M., Dietzel, M., Immenhauser, A., Schöne, B. R., Angiolini, L., and Schmahl, W. W.:
Experimental diagenesis: insights into aragonite to calcite transformation of Arctica islandica shells by hydrothermal treatment, Biogeosciences, 14, 1461–1492, https://doi.org/10.5194/bg-14-1461-2017, 2017.
Casella, L. A., He, S., Griesshaber, E., Fernández-Díaz, L., Greiner, M., Harper, E. M., Jackson, D. J., Ziegler, A., Mavromatis, V., Dietzel, M., Eisenhauer, A., Veintemillas-Verdaguer, S., Brand, U., and Schmahl, W. W.:
Hydrothermal alteration of aragonitic biocarbonates: assessment of micro- and nanostructural dissolution–reprecipitation and constraints of diagenetic overprint from quantitative statistical grain-area analysis, Biogeosciences, 15, 7451–7484, https://doi.org/10.5194/bg-15-7451-2018, 2018.
Chave, K. E., Deffeyes, K. S., Weyl, P. K., Garrels, R. M., and Thompson, M. E.:
Observations on the solubility of skeletal carbonates in aqueous solutions, Science, 137, 33–34, 1982.
Chernov, A. A.: Nucleation and Epitaxy, in: Modern Crystallography III, edited by: Vainshtein, B. K., Chernov, A. A., and Shuvalov, L. A., Springer Series in Solid-State Sciences, vol. 36, Springer, Berlin, Heidelberg, 48–103, https://doi.org/10.1007/978-3-642-81835-6_2, 1984.
Cherns, L. and Wright, V. P.:
Skeletal mineralogy and biodiversity of marine invertebrates: size matters more than seawater chemistry, Geological Society, London, Special Publications, 358, 9–17, 2011.
Cherns, L., Wheeley, J. R., and Wright, V. P.:
Taphonomic windows and molluscan preservation, Palaeogeogr. Palaeocl., 270, 220–229, 2008.
Cherns, L., Wheeley, J. R., and Wright, V. P.: Taphonomic Bias in Shelly Faunas Through Time: Early Aragonitic Dissolution and Its Implications for the Fossil Record, in: Taphonomy. Aims & Scope Topics in Geobiology Book Series, vol. 32, edited by: Allison, P. A. and Bottjer, D. J., Springer, Dordrecht, 79–105, https://doi.org/10.1007/978-90-481-8643-3_3, 2011.
Cisneros-Lázaro, D., Adams, A., Guo, J., Bernard, S., Daval, D., Baronnet, A., Grauby, O., Vennemann, T., Stolarski, J., Baumgartner, L., and Meibom, A.:
Species-specific foraminiferal ultrastructures modulate surfaces available for diagenesis, Microsc. Microanal., 27, 274–275, 2021.
Cisneros-Lázaro, D., Adams, A., Guo, J., Bernard, S., Baumgartner, L. P., Daval, D., Baronnet, A., Grauby, O., Vennemann, T., Stolarski, J., and Escrig, S.:
Fast and pervasive diagenetic isotope exchange in foraminifera tests is species-dependent, Nat. Commun., 13, 1–11, 2022.
De Choudens-Sanchez, V. and Gonzalez, L. A.:
Calcite and aragonite precipitation under controlled instantaneous supersaturation: elucidating the role of CaCO3 saturation state and ratio on calcium carbonate polymorphism, J. Sediment. Res., 79, 363–376, 2009.
Drake, J. L., Mass, T., Haramaty, L., Zelzion, E., Bhattacharya, D., and Falkowski, P. G.:
Proteomic analysis of skeletal organic matrix from the stony coral Stylophora pistillata, P. Natl. Acad. Sci. USA, 110, 3788–3793, 2013.
Fernández-Díaz, L., Putnis, A., Prieto, M., and Putnis, C. V.:
The role of magnesium in the crystallization of calcite and aragonite in a porous medium, J. Sediment. Res., 66, 482–491, 1996.
Forjanes, P., Astilleros, J. M., and Fernández-Díaz, L.:
The formation of barite and celestite through the replacement of gypsum, Minerals, 10, 189, https://doi.org/10.3390/min10020189, 2020a.
Forjanes, P., Gómez-Barreiro, J., Morales, J., Astilleros, J. M., and Fernández-Díaz, L.:
Epitactic growth of celestite on anhydrite: substrate induced twinning and morphological evolution of aggregates, CrystEngComm, 22, 5743–5759, 2020b.
Fyfe, W. S. and Bischoff, J. L.:
The calcite-aragonite problem, Soc. Econ. Pa., 13, 3–13, 1965.
Gaffey, S. J.:
Water in skeletal carbonates, J. Sediment. Res., 58, 397–414, 1988.
Gaffey, S. J., Kolak, J. J., and Bronnimann, C. E.:
Effects of drying, heating, annealing, and roasting on carbonate skeletal material, with geochemical and diagenetic implications, Geochim. Cosmochim. Ac., 55, 1627–1640, 1991.
Gebauer, D. and Cölfen, H.:
Prenucleation clusters and nonclassical nucleation, Nano Today, 6, 564–584, 2011.
Gebauer, D., Völkel, A., and Cölfen, H.:
Stable prenucleation calcium carbonate Clusters, Science, 322, 1819–1822, 2008.
Goffredo, S., Vergni, P., Reggi, M., Caroselli, E., Sparla, F., Levy, O., Dubinsky, Z., and Falini, G.:
The skeletal organic matrix from Mediterranean coral Balanophyllia europaea influences calcium carbonate precipitation, PLOS ONE, 6, 22338, https://doi.org/10.1371/journal.pone.0022338, 2011.
Gražulis, S., Chateigner, D., Downs, R. T., Yokochi, A. T., Quirós, M., Lutterotti, L., Manakova, E., Butkus, J., Moeck, P., and Le Bail, A.: Crystallography Open Database–an open-access collection of crystal structures, J. Appl. Crystallogr., 42, 726–729, 2009.
Greiner, M., Fernández-Díaz, L., Griesshaber, E., Zenkert, M. N., Yin, X., Ziegler, A., Veintemillas-Verdaguer, S., and Schmahl, W. W.:
Biomineral Reactivity: The Kinetics of the Replacement Reaction of Biological Aragonite to Apatite, Minerals, 8, 315, https://doi.org/10.3390/min8080315, 2018.
Griesshaber, E., Schmahl, W. W., Ubhi, H. S., Huber, J., Nindiyasari, F., Maier, B., and Ziegler, A.:
Homoepitaxial meso-and microscale crystal co-orientation and organic matrix network structure in Mytilus edulis nacre and calcite, Acta Biomater., 9, 9492–9502, 2013.
Griesshaber, E., Yin, X., Ziegler, A., Kelm, K., Checa, A., Eisenhauer, A., and Schmahl, W. W.:
Patterns of mineral organization in carbonate biological hard materials, in: Highlights in applied mineralogy, edited by: Heuss-Aßbichler, S., Amthauer, G., and John, M., de Gruyter, Berlin, 245–272, https://doi.org/10.1515/9783110497342-012, 2017.
Hall, A., Kennedy, W. J., and Taylor, J. H.:
Aragonite in fossils, P. Roy. Soc. Lond. B Bio., 168, 377–412, 1967.
Hallam, A. and O'Hara, M. J.:
Aragonitic fossils in the Lower Carboniferous of Scotland, Nature, 195, 273–274, 1962.
Hanor, J. S.:
Origin of saline fluids in sedimentary basins, Geological Society, London, Special Publications, 78, 151–174, 1994.
James, N. P., Bone, Y., and Kyser, T. K.:
Where has all the aragonite gone? Mineralogy of Holocene neritic cool-water carbonates, southern Australia, J. Sediment. Res., 75, 454–463, 2005.
Janiszewska, K., Mazur, M., Machalski, M., and Stolarski, J.:
From pristine aragonite to blocky calcite: Exceptional preservation and diagenesis of cephalopod nacre in porous Cretaceous limestones, PLOS ONE, 13, e0208598, https://doi.org/10.1371/journal.pone.0208598, 2018.
Jarosch, D. and Heger, G.:
Neutron diffraction refinement of the crystal structure of aragonite, Tscher. Mineral. Petrog., 35, 127–131, 1986.
Jonas, L., John, T., King, H. E., Geisler, T., and Putnis, A.:
The role of grain boundaries and transient porosity in rocks as fluid pathways for reaction front propagation, Earth Planet. Sc. Lett., 386, 64–74, 2014.
Jonas, L., Müller, T., Dohmen, R., Immenhauser, A., and Putlitz B.:
Hydrothermal replacement of biogenic and abiogenic aragonite by Mg-carbonates–Relation between textural control on effective element fluxes and resulting carbonate phase, Geochim. Cosmochim. Ac., 196, 289–306, 2017.
Keenan, S. W. and Engel, A. S.:
Early diagenesis and recrystallization of bone, Geochim. Cosmochim. Ac., 196, 209–223, 2017.
Kile, D. E., Eberl, D. D., Hoch, A. R., and Reddy, M. M.:
An assessment of calcite crystal growth mechanisms based on crystal size distributions, Geochim. Cosmochim. Ac., 64, 2937–2950, 2000.
Le Bayon, R., Brey, G. P., Ernst, W. G., and Mählmann, R. F.:
Experimental kinetic study of organic matter maturation: Time and pressure effects on vitrinite reflectance at 400 ∘C, Org. Geochem., 42, 340–355, 2011.
Le Pabic, C., Marie, A., Marie, B., Percot, A., Bonnaud-Ponticelli, L., Lopez, P. J., and Luquet, G.:
First proteomic analyses of the dorsal and ventral parts of the Sepia officinalis cuttlebone, J. Proteomics, 150, 63–73, 2017.
Lippmann F.:
The solubility product of complex minerals, mixed crystals and three-layer clay minerals, Neues Jb. Miner. Abh., 130, 243–263, 1977.
Lippmann F.:
Phase diagrams depicting the aqueous solubility of binary mineral systems, Neues Jb. Miner. Abh., 139, 1–25, 1980.
Lippmann F.:
Aqueous solubility of magnesian calcites with different endmembers, Acta. Mineral. Petrogr., 32, 5–19, 1991.
Lowenstam, H. A.:
Factors affecting the aragonite: calcite ratios in carbonate-secreting marine organisms, J. Geol., 62, 284–322, 1954.
Marie, B., Le Roy, N., Zanella-Cléon, I., Becchi, M., and Marin, F.:
Molecular evolution of mollusc shell proteins: insights from proteomic analysis of the edible mussel Mytilus, J. Mol. Evol., 72, 531–546, 2011.
Markgraf, S. A. and Reeder, R. J.:
High-temperature structure refinements of calcite and magnesite, Am. Mineral., 70, 590–600, 1985.
Morse, J. W., Arvidson, R. S., and Lüttge, A.:
Calcium carbonate formation and dissolution, Chem. Rev., 107, 342–381, 2007.
Moussout, H., Ahlafi, H., Aazza, M., and Bourakhouadar, M.:
Kinetics and mechanism of the thermal degradation of biopolymers chitin and chitosan using thermogravimetric analysis, Polym. Degrad. Stabil., 130, 1–9, 2016.
Mucci, A., Canuel, R., and Zhong, S.:
The solubility of calcite and aragonite in sulfate-free seawater and the seeded growth kinetics and composition of the precipitates at 25 ∘C, Chem. Geol., 74, 309–320, 1989.
Navrotsky, A.:
Energetic clues to pathways to biomineralization: Precursors, clusters, and nanoparticles, P. Natl. Acad. Sci. USA, 101, 12096–12101, 2004.
Nielsen, L. C., De Yoreo, J. J., and DePaolo, D. J.:
General model for calcite growth kinetics in the presence of impurity ions, Geochim. Cosmochim. Ac., 115, 100–114, 2013.
Nindiyasari, F., Fernández-Díaz, L., Griesshaber, E., Astilleros, J. M., Sanchez-Pastor, N., and Schmahl, W. W.:
Influence of gelatin hydrogel porosity on the crystallization of CaCO3, Cryst. Growth Des., 14, 1531–1542, 2014a.
Nindiyasari, F., Griesshaber, E., Fernandez-Diaz, L., Astilleros, J. M., Sanchez-Pastor, N., Ziegler, A., and Schmahl, W. W.:
Effects of Mg and hydrogel solid content on the crystallization of calcium carbonate in biomimetic counter-diffusion systems, Cryst. Growth Des., 14, 4790–4802, 2014b.
Noguera, C., Fritz, B., Clément, A., and Baronnet, A.:
Nucleation, growth, and ageing scenarios in closed systems I: A unified mathematical framework for precipitation, condensation and crystallization, J. Cryst. Growth, 297, 180–186, 2006.
Pederson, C. L., Weiss, L., Mavromatis, V., Rollion-Bard, C., Dietzel, M., Neuser, R., and Immenhauser, A.:
Significance of fluid chemistry throughout diagenesis of aragonitic Porites corals–An experimental approach, Depos. Rec., 5, 592–612, 2019a.
Pederson, C., Mavromatis, V., Dietzel, M., Rollion-Bard, C., Nehrke, G., Jöns, N., Jochum, K. P., and Immenhauser, A.:
Diagenesis of mollusc aragonite and the role of fluid reservoirs, Earth Planet. Sc. Lett., 514, 130–142, 2019b.
Pederson, C. L., Mavromatis, V., Dietzel, M., Rollion-Bard, C., Breitenbach, S. F. M., Yu, D., Nehrke, G., and Immenhauser, A.:
Variation in the diagenetic response of aragonite archives to hydrothermal alteration, Sediment. Geol., 406, 105716, 2020.
Perdikouri, C., Kasioptas, A., Putnis, C. V., and Putnis, A.:
The effect of fluid composition on the mechanism of the aragonite to calcite transition, Mineral. Mag., 72, 111–114, 2008.
Perdikouri, C., Kasioptas, A., Geisler, T., Schmidt, B. C., and Putnis, A.:
Experimental study of the aragonite to calcite transition in aqueous solution, Geochim. Cosmochim. Ac., 75, 6211–6224, 2011.
Perdikouri, C., Piazolo, S., Kasioptas, A., Schmidt, B. C., and Putnis, A.:
Hydrothermal replacement of Aragonite by Calcite: interplay between replacement, fracturing and growth, Eur. J. Mineral., 25, 123–136, 2013.
Petrova, T. V., Mahlmann, R. F., Stern, W. B., and Frey, M.:
Application of combustion and DTA-TGA analysis to the study of metamorphic organic matter, Schweiz. Miner. Petrog., 82, 33–53, 2002.
Plummer, L. N. and Busenberg, E.:
The solubilities of calcite, aragonite and vaterite in CO2-H2O solutions between 0 and 90 ∘C, and an evaluation of the aqueous model for the system CaCO3–CO2–H2O, Geochim. Cosmochim. Ac., 46, 1011–1040, 1982.
Plummer, L. N. and Busenberg, E.:
Thermodynamics of aragonite-strontianite solid solutions: Results from stoichiometric solubility at 25 and 76 ∘C, Geochim. Cosmochim. Ac., 51, 1393–1411, 1987.
Plummer, L. N. and Mackenzie, F. T.:
Predicting mineral solubility from rate data; application to the dissolution of magnesian calcites, Am. J. Sci., 274, 61–83, 1974.
Pokroy, B., Fitch, A. N., Lee, P. L., Quintana, J. P., El'ad, N. C., and Zolotoyabko, E.:
Anisotropic lattice distortions in the mollusk-made aragonite: a widespread phenomenon, J. Struct. Biol., 153, 145–150, 2006.
Prieto, M.:
Thermodynamics of solid solution-aqueous solution systems, Rev. Mineral. Geochem., 70, 47–85, 2009.
Putnis, A.:
Mineral replacement reactions: from macroscopic observations to microscopic mechanisms, Mineral. Mag, 66, 689–708, 2002.
Putnis, A.:
Mineral replacement reactions, Rev. Mineral. Geochem., 70, 87–124, 2009.
Putnis, A.:
Transient porosity resulting from fluid–mineral interaction and its consequences. Rev. Mineral. Geochem., 80, 1–23, 2015.
Putnis, A. and Putnis, C. V.:
The mechanism of reequilibration of solids in the presence of a fluid phase, J. Solid State Chem., 180, 1783–1786, 2007.
Putnis, C. V., Tsukamoto, K., and Nishimura, Y.:
Direct observations of pseudomorphism: compositional and textural evolution at a fluid-solid interface, Am. Mineral., 90, 1909–1912, 2005.
Radha, A. V. and Navrotsky, A.:
Thermodynamics of carbonates, Rev. Mineral. Geochem., 77, 73–121, 2013.
Radha, A. V., Forbes, T. Z., Killian, C. E., Gilbert, P. U. P. A., and Navrotsky, A.:
Transformation and crystallization energetic of synthetic and biogenic amorphous calcium Carbonate, P. Natl. Acad. Sci. USA, 107, 16438–16443, 2010.
Randle, V.: Theoretical Framework for Electron Backscatter Diffraction, in: Electron Backscatter Diffraction in Materials Science, edited by: Schwartz, A. J., Kumar, M., and Adams, B. L., Springer, Boston, MA, 19–30, https://doi.org/10.1007/978-1-4757-3205-4_2, 2000.
Redfern, S. A. T., Salje, E., and Navrotsky, A.:
High-temperature enthalpy at the orientational order-disorder transition in calcite: implications for the calcite/aragonite phase equilibrium, Contrib. Mineral. Petr., 101, 479–484, 1989.
Ritter, A. C., Mavromatis, V., Dietzel, M., Kwiecien, O., Wiethoff, F., Griesshaber, E., Casella, L. A., Schmahl, W. W., Koelen, J., Neuser, R. D., and Leis, A.:
Exploring the impact of diagenesis on (isotope) geochemical and microstructural alteration features in biogenic aragonite, Sedimentology, 64, 1354–1380, 2017.
Rodríguez-Carvajal, J.: Recent advances in magnetic structure determination by neutron powder diffraction, Physica B: Condensed Matter, 192, 55–69, 1993 (code avaible at: https://www.ill.eu/sites/fullprof/index.html).
Rodríguez-Carvajal, J.: Recent developments of the program FULLPROF, Commission on powder diffraction (IUCr), Newsletter, 26, 12–19, 2001 (code avaible at: https://www.ill.eu/sites/fullprof/index.html).
Ruiz-Agudo, E., Putnis, C. V., and Putnis, A.:
Coupled dissolution and precipitation at mineral–fluid interfaces, Chem. Geol., 383, 132–146, 2014.
Sancho-Tomás, M., Fermani, S., Durán-Olivencia, M. A., Otálora, F., Gómez-Morales, J., Falini, G., and García-Ruiz, J. M.:
Influence of charged polypeptides on nucleation and growth of CaCO3 evaluated by counterdiffusion experiments, Cryst. Growth Des., 13, 3884–3891, 2013.
Sancho-Tomás, M., Fermani, S., Reggi, M., García-Ruiz, J. M., Gómez-Morales, J., and Falini, G.:
Polypeptide effect on Mg2+ hydration inferred from CaCO3 formation: a biomineralization study by counter-diffusion, CrystEngComm, 18, 3265–3272, 2016.
Sandberg, P. A. and Hudson, J. D.:
Aragonite relic preservation in Jurassic calcite-replaced bivalves, Sedimentology, 30, 879–892, 1983.
Sass, E., Morse, J. W., and Millero, F. J.:
Dependence of the values of calcite and aragonite thermodynamic solubility products on ionic models, Am. J. Sci., 283, 218–229, 1983.
Schmidt, N. H. and Olesen, N. O.:
Computer-aided determination of crystal-lattice orientation from electron channeling patterns in the SEM, Can. Mineral., 27, 15–22, 1989.
Seuß, B., Nützel, A., Mapes, R. H., and Yancey, T. E.:
Facies and fauna of the Pennsylvanian Buckhorn Asphalt Quarry deposit: a review and new data on an important Palaeozoic fossil Lagerstätte with aragonite preservation, Facies, 55, 609, https://doi.org/10.1007/s10347-009-0181-9, 2009.
Simonet Roda, M., Griesshaber, E., Ziegler, A., Rupp, U., Yin, X., Henkel, D., Häussermann, V., Laudien, J., Brand, U., Eisenhauer, A., and Checa, A. G.:
Calcite fibre formation in modern brachiopod shells, Sci. Rep., 9, 1–15, 2019.
Simonet Roda, M., Griesshaber, E., Angiolini, L., Rollion-Bard, C., Harper, E. M., Bitner, M. A., Milner Garcia, S., Ye, F., Henkel, D., Häussermann, V., and Eisenhauer, A.:
The architecture of Recent brachiopod shells: diversity of biocrystal and biopolymer assemblages in rhynchonellide, terebratulide, thecideide and craniide shells, Mar. Biol., 169, 1–52. 2022.
Stephenson, A. E., DeYoreo, J. J., Wu, L., Wu, K. J., Hoyer, J., and Dove, P. M.:
Peptides enhance magnesium signature in calcite: insights into origins of vital effects, Science, 322, 724–727, 2008.
Sun, W., Jayaramana, S., Chen, W., Persson, K. A., and Cedera, G.:
Nucleation of metastable aragonite CaCO3 in seawater, P. Natl. Acad. Sci. USA, 112, 3199–3204, 2015.
Swart, P. K.:
The geochemistry of carbonate diagenesis: The past, present and future, Sedimentology, 62, 1233–1304, 2015.
Tiwari, A. and Raj, B.:
Reactions and Mechanisms in Thermal Analysis of Advanced Materials, John Wiley and Sons, New York, https://doi.org/10.1002/9781119117711, 2015.
Van Der Merwe, J. H.:
The role of lattice misfit in epitaxy, Crit. Rev. Solid State, 7, 209–231, 1978.
Vaitkus, A., Merkys, A., and Gražulis, S.: Validation of the crystallography open database using the crystallographic information framework, J. Appl. Crystallogr., 54, 661–672, 2021.
Vetter, T., Iggland, M., Ochsenbein, D. R., Hänseler, F. S., and Mazzotti, M.:
Modeling nucleation, growth, and Ostwald ripening in crystallization processes: a comparison between population balance and kinetic rate equation, Cryst. Growth Des., 13, 4890–4905, 2013.
Walter, L. M. and Morse, J. W.:
Reactive surface area of skeletal carbonates during dissolution; effect of grain size, J. Sediment. Res., 54, 1081–1090, 1984.
Wang, D., Wallace, A. F., De Yoreo, J. J., and Dove, P. M.:
Carboxylated molecules regulate magnesium content of amorphous calcium carbonates during calcification, P. Natl. Acad. Sci. USA, 106, 21511–21516, 2009.
Weiner, S. and Dove, P. M.:
An overview of biomineralization processes and the problem of the vital effect, Rev. Mineral. Geochem., 54, 1–29, 2003.
Weiner, S. and Traub, W.:
Macromolecules in mollusc shells and their functions in biomineralization, Philos. T. R. Soc. B., 304, 425–434, 1984.
Winter, J. D.: Principles of igneous and metamorphic petrology, 2 edn.,
Pearson education, 744 pp., ISBN-13: 9781292034768, 2014.
Wright, V. P. and Cherns, L.:
Are there “black holes” in carbonate deposystems?, Geol. Acta, 2, 285–290, 2004.
Wright, V. P., Cherns, L., and Hodges, P.:
Missing molluscs: Field testing taphonomic loss in the Mesozoic through early large scale aragonite dissolution, Geology, 31, 211–214, 2003.
Yin, X., Griesshaber, E., Fernandez-Diaz, L., Ziegler, A., García-García, F. J., and Schmahl, W. W.:
Influence of Gelatin–Agarose Composites and Mg on Hydrogel-Carbonate Aggregate Formation and Architecture, Cryst. Growth Des., 19, 5696–5715, 2019.
Short summary
Aragonitic skeletons are employed to decipher past climate dynamics and environmental change. Unfortunately, the information that these skeletons keep can be destroyed during diagenesis. In this work, we study the first changes undergone by aragonitic skeletons upon hydrothermal alteration. We observe that major changes occur from the very beginning of the alteration, even without mineralogical changes. These results have major implications for the use of these archives to understand the past.
Aragonitic skeletons are employed to decipher past climate dynamics and environmental change....
Altmetrics
Final-revised paper
Preprint