Articles | Volume 13, issue 8
https://doi.org/10.5194/bg-13-2241-2016
© Author(s) 2016. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
Special issue:
https://doi.org/10.5194/bg-13-2241-2016
© Author(s) 2016. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
Research article
| 
19 Apr 2016
Research article |
| 19 Apr 2016
Ammonium excretion and oxygen respiration of tropical copepods and euphausiids exposed to oxygen minimum zone conditions
GEOMAR Helmholtz Centre for Ocean Research Kiel,
Wischhofstr. 1–3, 24105 Kiel, Germany
Helena Hauss
GEOMAR Helmholtz Centre for Ocean Research Kiel,
Wischhofstr. 1–3, 24105 Kiel, Germany
Friedrich Buchholz
Alfred-Wegener-Institute, Am Handelshafen 12, 27570
Bremerhaven, Germany
Frank Melzner
GEOMAR Helmholtz Centre for Ocean Research Kiel,
Wischhofstr. 1–3, 24105 Kiel, Germany
Related authors
Alexandre Accardo, Rémi Laxenaire, Alberto Baudena, Sabrina Speich, Rainer Kiko, and Lars Stemmann
EGUsphere, https://doi.org/10.5194/egusphere-2024-1558, https://doi.org/10.5194/egusphere-2024-1558, 2024
Short summary
Short summary
The open ocean helps mitigate climate change by storing CO2 through the biological carbon pump (BCP). The BCP involves processes like phytoplankton capturing CO2 and sequestering it in the deep ocean via marine snow production. We found significant marine snow accumulation from the surface to 600 meters deep in frontal regions between eddies. We suggest that the coupling of hydrodynamics at eddy edges and biological activity (via planktonic organisms) may enhanced this process.
Mathilde Dugenne, Marco Corrales-Ugalde, Jessica Y. Luo, Rainer Kiko, Todd D. O'Brien, Jean-Olivier Irisson, Fabien Lombard, Lars Stemmann, Charles Stock, Clarissa R. Anderson, Marcel Babin, Nagib Bhairy, Sophie Bonnet, Francois Carlotti, Astrid Cornils, E. Taylor Crockford, Patrick Daniel, Corinne Desnos, Laetitia Drago, Amanda Elineau, Alexis Fischer, Nina Grandrémy, Pierre-Luc Grondin, Lionel Guidi, Cecile Guieu, Helena Hauss, Kendra Hayashi, Jenny A. Huggett, Laetitia Jalabert, Lee Karp-Boss, Kasia M. Kenitz, Raphael M. Kudela, Magali Lescot, Claudie Marec, Andrew McDonnell, Zoe Mériguet, Barbara Niehoff, Margaux Noyon, Thelma Panaïotis, Emily Peacock, Marc Picheral, Emilie Riquier, Collin Roesler, Jean-Baptiste Romagnan, Heidi M. Sosik, Gretchen Spencer, Jan Taucher, Chloé Tilliette, and Marion Vilain
Earth Syst. Sci. Data, 16, 2971–2999, https://doi.org/10.5194/essd-16-2971-2024, https://doi.org/10.5194/essd-16-2971-2024, 2024
Short summary
Short summary
Plankton and particles influence carbon cycling and energy flow in marine ecosystems. We used three types of novel plankton imaging systems to obtain size measurements from a range of plankton and particle sizes and across all major oceans. Data were compiled and cross-calibrated from many thousands of images, showing seasonal and spatial changes in particle size structure in different ocean basins. These datasets form the first release of the Pelagic Size Structure database (PSSdb).
Patricia Ayón Dejo, Elda Luz Pinedo Arteaga, Anna Schukat, Jan Taucher, Rainer Kiko, Helena Hauss, Sabrina Dorschner, Wilhelm Hagen, Mariona Segura-Noguera, and Silke Lischka
Biogeosciences, 20, 945–969, https://doi.org/10.5194/bg-20-945-2023, https://doi.org/10.5194/bg-20-945-2023, 2023
Short summary
Short summary
Ocean upwelling regions are highly productive. With ocean warming, severe changes in upwelling frequency and/or intensity and expansion of accompanying oxygen minimum zones are projected. In a field experiment off Peru, we investigated how different upwelling intensities affect the pelagic food web and found failed reproduction of dominant zooplankton. The changes projected could severely impact the reproductive success of zooplankton communities and the pelagic food web in upwelling regions.
Rainer Kiko, Marc Picheral, David Antoine, Marcel Babin, Léo Berline, Tristan Biard, Emmanuel Boss, Peter Brandt, Francois Carlotti, Svenja Christiansen, Laurent Coppola, Leandro de la Cruz, Emilie Diamond-Riquier, Xavier Durrieu de Madron, Amanda Elineau, Gabriel Gorsky, Lionel Guidi, Helena Hauss, Jean-Olivier Irisson, Lee Karp-Boss, Johannes Karstensen, Dong-gyun Kim, Rachel M. Lekanoff, Fabien Lombard, Rubens M. Lopes, Claudie Marec, Andrew M. P. McDonnell, Daniela Niemeyer, Margaux Noyon, Stephanie H. O'Daly, Mark D. Ohman, Jessica L. Pretty, Andreas Rogge, Sarah Searson, Masashi Shibata, Yuji Tanaka, Toste Tanhua, Jan Taucher, Emilia Trudnowska, Jessica S. Turner, Anya Waite, and Lars Stemmann
Earth Syst. Sci. Data, 14, 4315–4337, https://doi.org/10.5194/essd-14-4315-2022, https://doi.org/10.5194/essd-14-4315-2022, 2022
Short summary
Short summary
The term
marine particlescomprises detrital aggregates; fecal pellets; bacterioplankton, phytoplankton and zooplankton; and even fish. Here, we present a global dataset that contains 8805 vertical particle size distribution profiles obtained with Underwater Vision Profiler 5 (UVP5) camera systems. These data are valuable to the scientific community, as they can be used to constrain important biogeochemical processes in the ocean, such as the flux of carbon to the deep sea.
Natalia Belkin, Tamar Guy-Haim, Maxim Rubin-Blum, Ayah Lazar, Guy Sisma-Ventura, Rainer Kiko, Arseniy R. Morov, Tal Ozer, Isaac Gertman, Barak Herut, and Eyal Rahav
Ocean Sci., 18, 693–715, https://doi.org/10.5194/os-18-693-2022, https://doi.org/10.5194/os-18-693-2022, 2022
Short summary
Short summary
We studied how distinct water circulations that elevate (cyclone) or descend (anticyclone) water from the upper ocean affect the biomass, activity and diversity of planktonic microorganisms in the impoverished eastern Mediterranean. We show that cyclonic and anticyclonic eddies differ in their community composition and production. Moreover, the anticyclone may be a potential bio-invasion and dispersal vector, while the cyclone may serve as a thermal refugee for native species.
Mariana Hill Cruz, Iris Kriest, Yonss Saranga José, Rainer Kiko, Helena Hauss, and Andreas Oschlies
Biogeosciences, 18, 2891–2916, https://doi.org/10.5194/bg-18-2891-2021, https://doi.org/10.5194/bg-18-2891-2021, 2021
Short summary
Short summary
In this study we use a regional biogeochemical model of the eastern tropical South Pacific Ocean to implicitly simulate the effect that fluctuations in populations of small pelagic fish, such as anchovy and sardine, may have on the biogeochemistry of the northern Humboldt Current System. To do so, we vary the zooplankton mortality in the model, under the assumption that these fishes eat zooplankton. We also evaluate the model for the first time against mesozooplankton observations.
Gerd Krahmann, Damian L. Arévalo-Martínez, Andrew W. Dale, Marcus Dengler, Anja Engel, Nicolaas Glock, Patricia Grasse, Johannes Hahn, Helena Hauss, Mark Hopwood, Rainer Kiko, Alexandra Loginova, Carolin R. Löscher, Marie Maßmig, Alexandra-Sophie Roy, Renato Salvatteci, Stefan Sommer, Toste Tanhua, and Hela Mehrtens
Earth Syst. Sci. Data Discuss., https://doi.org/10.5194/essd-2020-308, https://doi.org/10.5194/essd-2020-308, 2021
Preprint withdrawn
Short summary
Short summary
The project "Climate-Biogeochemistry Interactions in the Tropical Ocean" (SFB 754) was a multidisciplinary research project active from 2008 to 2019 aimed at a better understanding of the coupling between the tropical climate and ocean circulation and the ocean's oxygen and nutrient balance. On 34 research cruises, mainly in the Southeast Tropical Pacific and the Northeast Tropical Atlantic, 1071 physical, chemical and biological data sets were collected.
Henk-Jan Hoving, Svenja Christiansen, Eduard Fabrizius, Helena Hauss, Rainer Kiko, Peter Linke, Philipp Neitzel, Uwe Piatkowski, and Arne Körtzinger
Ocean Sci., 15, 1327–1340, https://doi.org/10.5194/os-15-1327-2019, https://doi.org/10.5194/os-15-1327-2019, 2019
Short summary
Short summary
The pelagic in situ observation system (PELAGIOS) is a towed observation system with HD video camera and environmental sensors. It is used for pelagic video transects down to 3000 m. The system enables the visualization and exploration of pelagic organisms (> 1 cm), in particular delicate gelatinous fauna, which cannot be captured by nets. The video and hydrographic data give insight into the biodiversity, abundance, and distribution of oceanic pelagic organisms from the surface to the deep sea.
Soeren Thomsen, Johannes Karstensen, Rainer Kiko, Gerd Krahmann, Marcus Dengler, and Anja Engel
Biogeosciences, 16, 979–998, https://doi.org/10.5194/bg-16-979-2019, https://doi.org/10.5194/bg-16-979-2019, 2019
Short summary
Short summary
Physical and biogeochemical observations from an autonomous underwater vehicle in combination with ship-based measurements are used to investigate remote and local drivers of the oxygen and nutrient variability off Mauritania. Beside the transport of oxygen and nutrients characteristics from remote areas towards Mauritania also local remineralization of organic material close to the seabed seems to be important for the distribution of oxygen and nutrients.
Björn Fiedler, Damian S. Grundle, Florian Schütte, Johannes Karstensen, Carolin R. Löscher, Helena Hauss, Hannes Wagner, Alexandra Loginova, Rainer Kiko, Péricles Silva, Toste Tanhua, and Arne Körtzinger
Biogeosciences, 13, 5633–5647, https://doi.org/10.5194/bg-13-5633-2016, https://doi.org/10.5194/bg-13-5633-2016, 2016
Short summary
Short summary
Oxygen-depleted mesoscale features in the open eastern tropical North Atlantic, which are formed in the Mauritanian upwelling region, were discovered recently. This study examines biogeochemical structure and magnitudes of related processes within these isolated water masses. We found very low oxygen concentrations and strongly enhanced acidity at near-surface depth. Oxygen utilization and downward carbon export were found to exceed known values for this ocean region.
Carolin R. Löscher, Hermann W. Bange, Ruth A. Schmitz, Cameron M. Callbeck, Anja Engel, Helena Hauss, Torsten Kanzow, Rainer Kiko, Gaute Lavik, Alexandra Loginova, Frank Melzner, Judith Meyer, Sven C. Neulinger, Markus Pahlow, Ulf Riebesell, Harald Schunck, Sören Thomsen, and Hannes Wagner
Biogeosciences, 13, 3585–3606, https://doi.org/10.5194/bg-13-3585-2016, https://doi.org/10.5194/bg-13-3585-2016, 2016
Short summary
Short summary
The ocean loses oxygen due to climate change. Addressing this issue in tropical ocean regions (off Peru and Mauritania), we aimed to understand the effects of oxygen depletion on various aspects of marine biogeochemistry, including primary production and export production, the nitrogen cycle, greenhouse gas production, organic matter fluxes and remineralization, and the role of zooplankton and viruses.
Helena Hauss, Svenja Christiansen, Florian Schütte, Rainer Kiko, Miryam Edvam Lima, Elizandro Rodrigues, Johannes Karstensen, Carolin R. Löscher, Arne Körtzinger, and Björn Fiedler
Biogeosciences, 13, 1977–1989, https://doi.org/10.5194/bg-13-1977-2016, https://doi.org/10.5194/bg-13-1977-2016, 2016
Short summary
Short summary
In a low-oxygen eddy in the tropical Atlantic, total zooplankton biomass was increased. Larger plankton avoided the oxygen minimum zone (OMZ, < 20 µmol O2 kg−1). We identified four strategies by different plankton groups: (i) shallow OMZ avoidance and compression at surface, (ii) migration to shallow OMZ core during daytime, migration to surface at nighttime, (iii) residing in shallow OMZ day and night and (iv) migration through the shallow OMZ from oxygenated depths to surface and back.
J. Meyer, C. R. Löscher, S. C. Neulinger, A. F. Reichel, A. Loginova, C. Borchard, R. A. Schmitz, H. Hauss, R. Kiko, and U. Riebesell
Biogeosciences, 13, 781–794, https://doi.org/10.5194/bg-13-781-2016, https://doi.org/10.5194/bg-13-781-2016, 2016
A. N. Loginova, C. Borchard, J. Meyer, H. Hauss, R. Kiko, and A. Engel
Biogeosciences, 12, 6897–6914, https://doi.org/10.5194/bg-12-6897-2015, https://doi.org/10.5194/bg-12-6897-2015, 2015
A. Engel, C. Borchard, A. Loginova, J. Meyer, H. Hauss, and R. Kiko
Biogeosciences, 12, 5647–5665, https://doi.org/10.5194/bg-12-5647-2015, https://doi.org/10.5194/bg-12-5647-2015, 2015
Alexandre Accardo, Rémi Laxenaire, Alberto Baudena, Sabrina Speich, Rainer Kiko, and Lars Stemmann
EGUsphere, https://doi.org/10.5194/egusphere-2024-1558, https://doi.org/10.5194/egusphere-2024-1558, 2024
Short summary
Short summary
The open ocean helps mitigate climate change by storing CO2 through the biological carbon pump (BCP). The BCP involves processes like phytoplankton capturing CO2 and sequestering it in the deep ocean via marine snow production. We found significant marine snow accumulation from the surface to 600 meters deep in frontal regions between eddies. We suggest that the coupling of hydrodynamics at eddy edges and biological activity (via planktonic organisms) may enhanced this process.
Mathilde Dugenne, Marco Corrales-Ugalde, Jessica Y. Luo, Rainer Kiko, Todd D. O'Brien, Jean-Olivier Irisson, Fabien Lombard, Lars Stemmann, Charles Stock, Clarissa R. Anderson, Marcel Babin, Nagib Bhairy, Sophie Bonnet, Francois Carlotti, Astrid Cornils, E. Taylor Crockford, Patrick Daniel, Corinne Desnos, Laetitia Drago, Amanda Elineau, Alexis Fischer, Nina Grandrémy, Pierre-Luc Grondin, Lionel Guidi, Cecile Guieu, Helena Hauss, Kendra Hayashi, Jenny A. Huggett, Laetitia Jalabert, Lee Karp-Boss, Kasia M. Kenitz, Raphael M. Kudela, Magali Lescot, Claudie Marec, Andrew McDonnell, Zoe Mériguet, Barbara Niehoff, Margaux Noyon, Thelma Panaïotis, Emily Peacock, Marc Picheral, Emilie Riquier, Collin Roesler, Jean-Baptiste Romagnan, Heidi M. Sosik, Gretchen Spencer, Jan Taucher, Chloé Tilliette, and Marion Vilain
Earth Syst. Sci. Data, 16, 2971–2999, https://doi.org/10.5194/essd-16-2971-2024, https://doi.org/10.5194/essd-16-2971-2024, 2024
Short summary
Short summary
Plankton and particles influence carbon cycling and energy flow in marine ecosystems. We used three types of novel plankton imaging systems to obtain size measurements from a range of plankton and particle sizes and across all major oceans. Data were compiled and cross-calibrated from many thousands of images, showing seasonal and spatial changes in particle size structure in different ocean basins. These datasets form the first release of the Pelagic Size Structure database (PSSdb).
Patricia Ayón Dejo, Elda Luz Pinedo Arteaga, Anna Schukat, Jan Taucher, Rainer Kiko, Helena Hauss, Sabrina Dorschner, Wilhelm Hagen, Mariona Segura-Noguera, and Silke Lischka
Biogeosciences, 20, 945–969, https://doi.org/10.5194/bg-20-945-2023, https://doi.org/10.5194/bg-20-945-2023, 2023
Short summary
Short summary
Ocean upwelling regions are highly productive. With ocean warming, severe changes in upwelling frequency and/or intensity and expansion of accompanying oxygen minimum zones are projected. In a field experiment off Peru, we investigated how different upwelling intensities affect the pelagic food web and found failed reproduction of dominant zooplankton. The changes projected could severely impact the reproductive success of zooplankton communities and the pelagic food web in upwelling regions.
Rainer Kiko, Marc Picheral, David Antoine, Marcel Babin, Léo Berline, Tristan Biard, Emmanuel Boss, Peter Brandt, Francois Carlotti, Svenja Christiansen, Laurent Coppola, Leandro de la Cruz, Emilie Diamond-Riquier, Xavier Durrieu de Madron, Amanda Elineau, Gabriel Gorsky, Lionel Guidi, Helena Hauss, Jean-Olivier Irisson, Lee Karp-Boss, Johannes Karstensen, Dong-gyun Kim, Rachel M. Lekanoff, Fabien Lombard, Rubens M. Lopes, Claudie Marec, Andrew M. P. McDonnell, Daniela Niemeyer, Margaux Noyon, Stephanie H. O'Daly, Mark D. Ohman, Jessica L. Pretty, Andreas Rogge, Sarah Searson, Masashi Shibata, Yuji Tanaka, Toste Tanhua, Jan Taucher, Emilia Trudnowska, Jessica S. Turner, Anya Waite, and Lars Stemmann
Earth Syst. Sci. Data, 14, 4315–4337, https://doi.org/10.5194/essd-14-4315-2022, https://doi.org/10.5194/essd-14-4315-2022, 2022
Short summary
Short summary
The term
marine particlescomprises detrital aggregates; fecal pellets; bacterioplankton, phytoplankton and zooplankton; and even fish. Here, we present a global dataset that contains 8805 vertical particle size distribution profiles obtained with Underwater Vision Profiler 5 (UVP5) camera systems. These data are valuable to the scientific community, as they can be used to constrain important biogeochemical processes in the ocean, such as the flux of carbon to the deep sea.
Natalia Belkin, Tamar Guy-Haim, Maxim Rubin-Blum, Ayah Lazar, Guy Sisma-Ventura, Rainer Kiko, Arseniy R. Morov, Tal Ozer, Isaac Gertman, Barak Herut, and Eyal Rahav
Ocean Sci., 18, 693–715, https://doi.org/10.5194/os-18-693-2022, https://doi.org/10.5194/os-18-693-2022, 2022
Short summary
Short summary
We studied how distinct water circulations that elevate (cyclone) or descend (anticyclone) water from the upper ocean affect the biomass, activity and diversity of planktonic microorganisms in the impoverished eastern Mediterranean. We show that cyclonic and anticyclonic eddies differ in their community composition and production. Moreover, the anticyclone may be a potential bio-invasion and dispersal vector, while the cyclone may serve as a thermal refugee for native species.
Mariana Hill Cruz, Iris Kriest, Yonss Saranga José, Rainer Kiko, Helena Hauss, and Andreas Oschlies
Biogeosciences, 18, 2891–2916, https://doi.org/10.5194/bg-18-2891-2021, https://doi.org/10.5194/bg-18-2891-2021, 2021
Short summary
Short summary
In this study we use a regional biogeochemical model of the eastern tropical South Pacific Ocean to implicitly simulate the effect that fluctuations in populations of small pelagic fish, such as anchovy and sardine, may have on the biogeochemistry of the northern Humboldt Current System. To do so, we vary the zooplankton mortality in the model, under the assumption that these fishes eat zooplankton. We also evaluate the model for the first time against mesozooplankton observations.
Trystan Sanders, Jörn Thomsen, Jens Daniel Müller, Gregor Rehder, and Frank Melzner
Biogeosciences, 18, 2573–2590, https://doi.org/10.5194/bg-18-2573-2021, https://doi.org/10.5194/bg-18-2573-2021, 2021
Short summary
Short summary
The Baltic Sea is expected to experience a rapid drop in salinity and increases in acidity and warming in the next century. Calcifying mussels dominate Baltic Sea seafloor ecosystems yet are sensitive to changes in seawater chemistry. We combine laboratory experiments and a field study and show that a lack of calcium causes extremely slow growth rates in mussels at low salinities. Subsequently, climate change in the Baltic may have drastic ramifications for Baltic seafloor ecosystems.
Gerd Krahmann, Damian L. Arévalo-Martínez, Andrew W. Dale, Marcus Dengler, Anja Engel, Nicolaas Glock, Patricia Grasse, Johannes Hahn, Helena Hauss, Mark Hopwood, Rainer Kiko, Alexandra Loginova, Carolin R. Löscher, Marie Maßmig, Alexandra-Sophie Roy, Renato Salvatteci, Stefan Sommer, Toste Tanhua, and Hela Mehrtens
Earth Syst. Sci. Data Discuss., https://doi.org/10.5194/essd-2020-308, https://doi.org/10.5194/essd-2020-308, 2021
Preprint withdrawn
Short summary
Short summary
The project "Climate-Biogeochemistry Interactions in the Tropical Ocean" (SFB 754) was a multidisciplinary research project active from 2008 to 2019 aimed at a better understanding of the coupling between the tropical climate and ocean circulation and the ocean's oxygen and nutrient balance. On 34 research cruises, mainly in the Southeast Tropical Pacific and the Northeast Tropical Atlantic, 1071 physical, chemical and biological data sets were collected.
Henk-Jan Hoving, Svenja Christiansen, Eduard Fabrizius, Helena Hauss, Rainer Kiko, Peter Linke, Philipp Neitzel, Uwe Piatkowski, and Arne Körtzinger
Ocean Sci., 15, 1327–1340, https://doi.org/10.5194/os-15-1327-2019, https://doi.org/10.5194/os-15-1327-2019, 2019
Short summary
Short summary
The pelagic in situ observation system (PELAGIOS) is a towed observation system with HD video camera and environmental sensors. It is used for pelagic video transects down to 3000 m. The system enables the visualization and exploration of pelagic organisms (> 1 cm), in particular delicate gelatinous fauna, which cannot be captured by nets. The video and hydrographic data give insight into the biodiversity, abundance, and distribution of oceanic pelagic organisms from the surface to the deep sea.
Soeren Thomsen, Johannes Karstensen, Rainer Kiko, Gerd Krahmann, Marcus Dengler, and Anja Engel
Biogeosciences, 16, 979–998, https://doi.org/10.5194/bg-16-979-2019, https://doi.org/10.5194/bg-16-979-2019, 2019
Short summary
Short summary
Physical and biogeochemical observations from an autonomous underwater vehicle in combination with ship-based measurements are used to investigate remote and local drivers of the oxygen and nutrient variability off Mauritania. Beside the transport of oxygen and nutrients characteristics from remote areas towards Mauritania also local remineralization of organic material close to the seabed seems to be important for the distribution of oxygen and nutrients.
Jörn Thomsen, Kirti Ramesh, Trystan Sanders, Markus Bleich, and Frank Melzner
Biogeosciences, 15, 1469–1482, https://doi.org/10.5194/bg-15-1469-2018, https://doi.org/10.5194/bg-15-1469-2018, 2018
Short summary
Short summary
The distribution of mussel in estuaries is limited but the mechanisms are not well understood. We document for the first time that reduced Ca2+ concentration in the low saline, brackish Baltic Sea affects the ability of mussel larvae to calcify the first larval shell. As complete formation of the shell is a prerequisite for successful development, impaired calcification during this sensitive life stage can have detrimental effects on the species' ability to colonize habitats.
Johannes Karstensen, Florian Schütte, Alice Pietri, Gerd Krahmann, Björn Fiedler, Damian Grundle, Helena Hauss, Arne Körtzinger, Carolin R. Löscher, Pierre Testor, Nuno Vieira, and Martin Visbeck
Biogeosciences, 14, 2167–2181, https://doi.org/10.5194/bg-14-2167-2017, https://doi.org/10.5194/bg-14-2167-2017, 2017
Short summary
Short summary
High-resolution observational data from underwater gliders and ships are used to investigate drivers and pathways of nutrient upwelling in high-productive whirling ecosystems (eddies). The data suggest that the upwelling is created by the interaction of wind-induced internal waves with the local rotation of the eddy. Because of differences in nutrient and oxygen pathways, a low-oxygen core is established at shallow depth in the high-productive eddies.
Florian Schütte, Johannes Karstensen, Gerd Krahmann, Helena Hauss, Björn Fiedler, Peter Brandt, Martin Visbeck, and Arne Körtzinger
Biogeosciences, 13, 5865–5881, https://doi.org/10.5194/bg-13-5865-2016, https://doi.org/10.5194/bg-13-5865-2016, 2016
Short summary
Short summary
Mesoscale eddies with very low–oxygen concentrations at shallow depth have been recently discovered in the eastern tropical North Atlantic. Our analysis shows that low oxygen eddies occur more frequent than expected and are found even close to the equator (8° N). From budget calculations we show that an oxygen reduction of 7 µmol/kg in the depth range of 50–150 m in the eastern tropical North Atlantic (peak reduction is 16 µmol/kg at 100 m depth) can be associated with the dispersion of these eddies.
Björn Fiedler, Damian S. Grundle, Florian Schütte, Johannes Karstensen, Carolin R. Löscher, Helena Hauss, Hannes Wagner, Alexandra Loginova, Rainer Kiko, Péricles Silva, Toste Tanhua, and Arne Körtzinger
Biogeosciences, 13, 5633–5647, https://doi.org/10.5194/bg-13-5633-2016, https://doi.org/10.5194/bg-13-5633-2016, 2016
Short summary
Short summary
Oxygen-depleted mesoscale features in the open eastern tropical North Atlantic, which are formed in the Mauritanian upwelling region, were discovered recently. This study examines biogeochemical structure and magnitudes of related processes within these isolated water masses. We found very low oxygen concentrations and strongly enhanced acidity at near-surface depth. Oxygen utilization and downward carbon export were found to exceed known values for this ocean region.
Carolin R. Löscher, Hermann W. Bange, Ruth A. Schmitz, Cameron M. Callbeck, Anja Engel, Helena Hauss, Torsten Kanzow, Rainer Kiko, Gaute Lavik, Alexandra Loginova, Frank Melzner, Judith Meyer, Sven C. Neulinger, Markus Pahlow, Ulf Riebesell, Harald Schunck, Sören Thomsen, and Hannes Wagner
Biogeosciences, 13, 3585–3606, https://doi.org/10.5194/bg-13-3585-2016, https://doi.org/10.5194/bg-13-3585-2016, 2016
Short summary
Short summary
The ocean loses oxygen due to climate change. Addressing this issue in tropical ocean regions (off Peru and Mauritania), we aimed to understand the effects of oxygen depletion on various aspects of marine biogeochemistry, including primary production and export production, the nitrogen cycle, greenhouse gas production, organic matter fluxes and remineralization, and the role of zooplankton and viruses.
Helena Hauss, Svenja Christiansen, Florian Schütte, Rainer Kiko, Miryam Edvam Lima, Elizandro Rodrigues, Johannes Karstensen, Carolin R. Löscher, Arne Körtzinger, and Björn Fiedler
Biogeosciences, 13, 1977–1989, https://doi.org/10.5194/bg-13-1977-2016, https://doi.org/10.5194/bg-13-1977-2016, 2016
Short summary
Short summary
In a low-oxygen eddy in the tropical Atlantic, total zooplankton biomass was increased. Larger plankton avoided the oxygen minimum zone (OMZ, < 20 µmol O2 kg−1). We identified four strategies by different plankton groups: (i) shallow OMZ avoidance and compression at surface, (ii) migration to shallow OMZ core during daytime, migration to surface at nighttime, (iii) residing in shallow OMZ day and night and (iv) migration through the shallow OMZ from oxygenated depths to surface and back.
J. Meyer, C. R. Löscher, S. C. Neulinger, A. F. Reichel, A. Loginova, C. Borchard, R. A. Schmitz, H. Hauss, R. Kiko, and U. Riebesell
Biogeosciences, 13, 781–794, https://doi.org/10.5194/bg-13-781-2016, https://doi.org/10.5194/bg-13-781-2016, 2016
C. R. Löscher, M. A. Fischer, S. C. Neulinger, B. Fiedler, M. Philippi, F. Schütte, A. Singh, H. Hauss, J. Karstensen, A. Körtzinger, S. Künzel, and R. A. Schmitz
Biogeosciences, 12, 7467–7482, https://doi.org/10.5194/bg-12-7467-2015, https://doi.org/10.5194/bg-12-7467-2015, 2015
Short summary
Short summary
The waters of the tropical Atlantic Open Ocean usually contain comparably high concentrations of oxygen. Now, it became clear that there are watermasses related to eddies that are nearly anoxic. We surveyed one of those eddies and found a biosphere that largely differed from the usual biosphere present in this area with a specific community responsible for primary production and for degradation processes. Further, we found the very first indication for active nitrogen loss in the open Atlantic.
A. N. Loginova, C. Borchard, J. Meyer, H. Hauss, R. Kiko, and A. Engel
Biogeosciences, 12, 6897–6914, https://doi.org/10.5194/bg-12-6897-2015, https://doi.org/10.5194/bg-12-6897-2015, 2015
A. Engel, C. Borchard, A. Loginova, J. Meyer, H. Hauss, and R. Kiko
Biogeosciences, 12, 5647–5665, https://doi.org/10.5194/bg-12-5647-2015, https://doi.org/10.5194/bg-12-5647-2015, 2015
Related subject area
Biogeochemistry: Open Ocean
Short-term response of Emiliania huxleyi growth and morphology to abrupt salinity stress
Assessing the impact of CO2-equilibrated ocean alkalinity enhancement on microbial metabolic rates in an oligotrophic system
Phosphomonoesterase and phosphodiesterase activities in the eastern Mediterranean in two contrasting seasonal situations
Net primary production annual maxima in the North Atlantic projected to shift in the 21st century
Testing the influence of light on nitrite cycling in the eastern tropical North Pacific
Loss of nitrogen via anaerobic ammonium oxidation (anammox) in the California Current system during the late Quaternary
Technical note: Assessment of float pH data quality control methods – a case study in the subpolar northwest Atlantic Ocean
Effects of grain size and seawater salinity on magnesium hydroxide dissolution and secondary calcium carbonate precipitation kinetics: implications for ocean alkalinity enhancement
Linking northeastern North Pacific oxygen changes to upstream surface outcrop variations
Underestimation of multi-decadal global O2 loss due to an optimal interpolation method
Reviews and syntheses: expanding the global coverage of gross primary production and net community production measurements using Biogeochemical-Argo floats
Characteristics of surface physical and biogeochemical parameters within mesoscale eddies in the Southern Ocean
Climatic Controls on Metabolic Constraints in the Ocean
Seasonal dynamics and annual budget of dissolved inorganic carbon in the northwestern Mediterranean deep-convection region
The fingerprint of climate variability on the surface ocean cycling of iron and its isotopes
Reconstructing the ocean's mesopelagic zone carbon budget: sensitivity and estimation of parameters associated with prokaryotic remineralization
Evolution of oxygen and stratification in the North Pacific Ocean in CMIP6 Earth System Models
Seasonal cycles of biogeochemical fluxes in the Scotia Sea, Southern Ocean: a stable isotope approach
Biological impact of ocean alkalinity enhancement of magnesium hydroxide on marine microalgae using bioassays simulating ship-based dispersion
Decadal changes of anthropogenic carbon in the Atlantic 1990–2010
Absence of photophysiological response to iron addition in autumn phytoplankton in the Antarctic sea-ice zone
Optimal parameters for the ocean's nutrient, carbon, and oxygen cycles compensate for circulation biases but replumb the biological pump
Importance of multiple sources of iron for the upper-ocean biogeochemistry over the northern Indian Ocean
Exploring the role of different data types and timescales in the quality of marine biogeochemical model calibration
All about nitrite: exploring nitrite sources and sinks in the eastern tropical North Pacific oxygen minimum zone
Fossil coccolith morphological attributes as a new proxy for deep ocean carbonate chemistry
Reconstructing ocean carbon storage with CMIP6 Earth system models and synthetic Argo observations
Using machine learning and Biogeochemical-Argo (BGC-Argo) floats to assess biogeochemical models and optimize observing system design
The representation of alkalinity and the carbonate pump from CMIP5 to CMIP6 Earth system models and implications for the carbon cycle
Model estimates of metazoans' contributions to the biological carbon pump
Tracing differences in iron supply to the Mid-Atlantic Ridge valley between hydrothermal vent sites: implications for the addition of iron to the deep ocean
Nitrite cycling in the primary nitrite maxima of the eastern tropical North Pacific
Hotspots and drivers of compound marine heatwaves and low net primary production extremes
Ecosystem impacts of marine heat waves in the northeast Pacific
Tracing the role of Arctic shelf processes in Si and N cycling and export through the Fram Strait: insights from combined silicon and nitrate isotopes
Controls on the relative abundances and rates of nitrifying microorganisms in the ocean
The response of diazotrophs to nutrient amendment in the South China Sea and western North Pacific
Influence of GEOTRACES data distribution and misfit function choice on objective parameter retrieval in a marine zinc cycle model
Physiological flexibility of phytoplankton impacts modelled chlorophyll and primary production across the North Pacific Ocean
Observation-constrained estimates of the global ocean carbon sink from Earth system models
Early winter barium excess in the southern Indian Ocean as an annual remineralisation proxy (GEOTRACES GIPr07 cruise)
Controlling factors on the global distribution of a representative marine non-cyanobacterial diazotroph phylotype (Gamma A)
Summer trends and drivers of sea surface fCO2 and pH changes observed in the southern Indian Ocean over the last two decades (1998–2019)
Global nutrient cycling by commercially targeted marine fish
Major processes of the dissolved cobalt cycle in the North and equatorial Pacific Ocean
The impact of the South-East Madagascar Bloom on the oceanic CO2 sink
Nitrite regeneration in the oligotrophic Atlantic Ocean
Bridging the gaps between particulate backscattering measurements and modeled particulate organic carbon in the ocean
Biological production in two contrasted regions of the Mediterranean Sea during the oligotrophic period: an estimate based on the diel cycle of optical properties measured by BioGeoChemical-Argo profiling floats
Acidification of the Nordic Seas
Rosie M. Sheward, Christina Gebühr, Jörg Bollmann, and Jens O. Herrle
Biogeosciences, 21, 3121–3141, https://doi.org/10.5194/bg-21-3121-2024, https://doi.org/10.5194/bg-21-3121-2024, 2024
Short summary
Short summary
How quickly do marine microorganisms respond to salinity stress? Our experiments with the calcifying marine plankton Emiliania huxleyi show that growth and cell morphology responded to salinity stress within as little as 24–48 hours, demonstrating that morphology and calcification are sensitive to salinity over a range of timescales. Our results have implications for understanding the short-term role of E. huxleyi in biogeochemical cycles and in size-based paleoproxies for salinity.
Laura Marín-Samper, Javier Arístegui, Nauzet Hernández-Hernández, Joaquín Ortiz, Stephen D. Archer, Andrea Ludwig, and Ulf Riebesell
Biogeosciences, 21, 2859–2876, https://doi.org/10.5194/bg-21-2859-2024, https://doi.org/10.5194/bg-21-2859-2024, 2024
Short summary
Short summary
Our planet is facing a climate crisis. Scientists are working on innovative solutions that will aid in capturing the hard to abate emissions before it is too late. Exciting research reveals that ocean alkalinity enhancement, a key climate change mitigation strategy, does not harm phytoplankton, the cornerstone of marine ecosystems. Through meticulous study, we may have uncovered a positive relationship: up to a specific limit, enhancing ocean alkalinity boosts photosynthesis by certain species.
France Van Wambeke, Pascal Conan, Mireille Pujo-Pay, Vincent Taillandier, Olivier Crispi, Alexandra Pavlidou, Sandra Nunige, Morgane Didry, Christophe Salmeron, and Elvira Pulido-Villena
Biogeosciences, 21, 2621–2640, https://doi.org/10.5194/bg-21-2621-2024, https://doi.org/10.5194/bg-21-2621-2024, 2024
Short summary
Short summary
Phosphomonoesterase (PME) and phosphodiesterase (PDE) activities over the epipelagic zone are described in the eastern Mediterranean Sea in winter and autumn. The types of concentration kinetics obtained for PDE (saturation at 50 µM, high Km, high turnover times) compared to those of PME (saturation at 1 µM, low Km, low turnover times) are discussed in regard to the possible inequal distribution of PDE and PME in the size continuum of organic material and accessibility to phosphodiesters.
Jenny Hieronymus, Magnus Hieronymus, Matthias Gröger, Jörg Schwinger, Raffaele Bernadello, Etienne Tourigny, Valentina Sicardi, Itzel Ruvalcaba Baroni, and Klaus Wyser
Biogeosciences, 21, 2189–2206, https://doi.org/10.5194/bg-21-2189-2024, https://doi.org/10.5194/bg-21-2189-2024, 2024
Short summary
Short summary
The timing of the net primary production annual maxima in the North Atlantic in the period 1750–2100 is investigated using two Earth system models and the high-emissions scenario SSP5-8.5. It is found that, for most of the region, the annual maxima occur progressively earlier, with the most change occurring after the year 2000. Shifts in the seasonality of the primary production may impact the entire ecosystem, which highlights the need for long-term monitoring campaigns in this area.
Nicole M. Travis, Colette L. Kelly, and Karen L. Casciotti
Biogeosciences, 21, 1985–2004, https://doi.org/10.5194/bg-21-1985-2024, https://doi.org/10.5194/bg-21-1985-2024, 2024
Short summary
Short summary
We conducted experimental manipulations of light level on microbial communities from the primary nitrite maximum. Overall, while individual microbial processes have different directions and magnitudes in their response to increasing light, the net community response is a decline in nitrite production with increasing light. We conclude that while increased light may decrease net nitrite production, high-light conditions alone do not exclude nitrification from occurring in the surface ocean.
Zoë Rebecca van Kemenade, Zeynep Erdem, Ellen Christine Hopmans, Jaap Smede Sinninghe Damsté, and Darci Rush
Biogeosciences, 21, 1517–1532, https://doi.org/10.5194/bg-21-1517-2024, https://doi.org/10.5194/bg-21-1517-2024, 2024
Short summary
Short summary
The California Current system (CCS) hosts the eastern subtropical North Pacific oxygen minimum zone (ESTNP OMZ). This study shows anaerobic ammonium oxidizing (anammox) bacteria cause a loss of bioavailable nitrogen (N) in the ESTNP OMZ throughout the late Quaternary. Anammox occurred during both glacial and interglacial periods and was driven by the supply of organic matter and changes in ocean currents. These findings may have important consequences for biogeochemical models of the CCS.
Cathy Wimart-Rousseau, Tobias Steinhoff, Birgit Klein, Henry Bittig, and Arne Körtzinger
Biogeosciences, 21, 1191–1211, https://doi.org/10.5194/bg-21-1191-2024, https://doi.org/10.5194/bg-21-1191-2024, 2024
Short summary
Short summary
The marine CO2 system can be measured independently and continuously by BGC-Argo floats since numerous pH sensors have been developed to suit these autonomous measurements platforms. By applying the Argo correction routines to float pH data acquired in the subpolar North Atlantic Ocean, we report the uncertainty and lack of objective criteria associated with the choice of the reference method as well the reference depth for the pH correction.
Charly Andre Moras, Tyler Cyronak, Lennart Thomas Bach, Renaud Joannes-Boyau, and Kai Georg Schulz
EGUsphere, https://doi.org/10.5194/egusphere-2024-645, https://doi.org/10.5194/egusphere-2024-645, 2024
Short summary
Short summary
We investigate the effects of mineral grain size and seawater salinity on magnesium hydroxide dissolution and calcium carbonate precipitation kinetics for ocean alkalinity enhancement. Salinity did not affect the dissolution, but calcium carbonate formed earlier at lower salinities due to the lower magnesium and dissolved organic carbon concentrations. Smaller grain size dissolved faster, but calcium carbonate precipitated earlier, suggesting that medium grain size is optimum for both kinetics.
Sabine Mecking and Kyla Drushka
Biogeosciences, 21, 1117–1133, https://doi.org/10.5194/bg-21-1117-2024, https://doi.org/10.5194/bg-21-1117-2024, 2024
Short summary
Short summary
This study investigates whether northeastern North Pacific oxygen changes may be caused by surface density changes in the northwest as water moves along density horizons from the surface into the subsurface ocean. A correlation is found with a lag that about matches the travel time of water from the northwest to the northeast. Salinity is the main driver causing decadal changes in surface density, whereas salinity and temperature contribute about equally to long-term declining density trends.
Takamitsu Ito, Hernan E. Garcia, Zhankun Wang, Shoshiro Minobe, Matthew C. Long, Just Cebrian, James Reagan, Tim Boyer, Christopher Paver, Courtney Bouchard, Yohei Takano, Seth Bushinsky, Ahron Cervania, and Curtis A. Deutsch
Biogeosciences, 21, 747–759, https://doi.org/10.5194/bg-21-747-2024, https://doi.org/10.5194/bg-21-747-2024, 2024
Short summary
Short summary
This study aims to estimate how much oceanic oxygen has been lost and its uncertainties. One major source of uncertainty comes from the statistical gap-filling methods. Outputs from Earth system models are used to generate synthetic observations where oxygen data are extracted from the model output at the location and time of historical oceanographic cruises. Reconstructed oxygen trend is approximately two-thirds of the true trend.
Robert W. Izett, Katja Fennel, Adam C. Stoer, and David P. Nicholson
Biogeosciences, 21, 13–47, https://doi.org/10.5194/bg-21-13-2024, https://doi.org/10.5194/bg-21-13-2024, 2024
Short summary
Short summary
This paper provides an overview of the capacity to expand the global coverage of marine primary production estimates using autonomous ocean-going instruments, called Biogeochemical-Argo floats. We review existing approaches to quantifying primary production using floats, provide examples of the current implementation of the methods, and offer insights into how they can be better exploited. This paper is timely, given the ongoing expansion of the Biogeochemical-Argo array.
Qian Liu, Yingjie Liu, and Xiaofeng Li
Biogeosciences, 20, 4857–4874, https://doi.org/10.5194/bg-20-4857-2023, https://doi.org/10.5194/bg-20-4857-2023, 2023
Short summary
Short summary
In the Southern Ocean, abundant eddies behave opposite to our expectations. That is, anticyclonic (cyclonic) eddies are cold (warm). By investigating the variations of physical and biochemical parameters in eddies, we find that abnormal eddies have unique and significant effects on modulating the parameters. This study fills a gap in understanding the effects of abnormal eddies on physical and biochemical parameters in the Southern Ocean.
Precious Mongwe, Matthew Long, Takamitsu Ito, Curtis Deutsch, and Yeray Santana-Falcón
EGUsphere, https://doi.org/10.5194/egusphere-2023-2822, https://doi.org/10.5194/egusphere-2023-2822, 2023
Short summary
Short summary
We use a collection of measurements that captures the physiological sensitivity of organisms to temperature and oxygen, and a model to investigate how natural climate variations and climate warming will impact the ability of marine heterotrophic marine organisms to support habitat in the future. We find that warming and the related loss of marine dissolved oxygen over the next several decades will reduce the volume of ocean habitat, and increasing vulnerability to temperature-oxygen extremes.
Caroline Ulses, Claude Estournel, Patrick Marsaleix, Karline Soetaert, Marine Fourrier, Laurent Coppola, Dominique Lefèvre, Franck Touratier, Catherine Goyet, Véronique Guglielmi, Fayçal Kessouri, Pierre Testor, and Xavier Durrieu de Madron
Biogeosciences, 20, 4683–4710, https://doi.org/10.5194/bg-20-4683-2023, https://doi.org/10.5194/bg-20-4683-2023, 2023
Short summary
Short summary
Deep convection plays a key role in the circulation, thermodynamics, and biogeochemical cycles in the Mediterranean Sea, considered to be a hotspot of biodiversity and climate change. In this study, we investigate the seasonal and annual budget of dissolved inorganic carbon in the deep-convection area of the northwestern Mediterranean Sea.
Daniela König and Alessandro Tagliabue
Biogeosciences, 20, 4197–4212, https://doi.org/10.5194/bg-20-4197-2023, https://doi.org/10.5194/bg-20-4197-2023, 2023
Short summary
Short summary
Using model simulations, we show that natural and anthropogenic changes in the global climate leave a distinct fingerprint in the isotopic signatures of iron in the surface ocean. We find that these climate effects on iron isotopes are often caused by the redistribution of iron from different external sources to the ocean, due to changes in ocean currents, and by changes in algal growth, which take up iron. Thus, isotopes may help detect climate-induced changes in iron supply and algal uptake.
Chloé Baumas, Robin Fuchs, Marc Garel, Jean-Christophe Poggiale, Laurent Memery, Frédéric A. C. Le Moigne, and Christian Tamburini
Biogeosciences, 20, 4165–4182, https://doi.org/10.5194/bg-20-4165-2023, https://doi.org/10.5194/bg-20-4165-2023, 2023
Short summary
Short summary
Through the sink of particles in the ocean, carbon (C) is exported and sequestered when reaching 1000 m. Attempts to quantify C exported vs. C consumed by heterotrophs have increased. Yet most of the conducted estimations have led to C demands several times higher than C export. The choice of parameters greatly impacts the results. As theses parameters are overlooked, non-accurate values are often used. In this study we show that C budgets can be well balanced when using appropriate values.
Lyuba Novi, Annalisa Bracco, Takamitsu Ito, and Yohei Takano
Biogeosciences Discuss., https://doi.org/10.5194/bg-2023-129, https://doi.org/10.5194/bg-2023-129, 2023
Revised manuscript accepted for BG
Short summary
Short summary
We explored the relationship between oxygen and stratification in the North Pacific Ocean, using a combination of data mining and machine learning. We used isopycnic potential vorticity (IPV) as an indicator to quantify ocean ventilation and we analyzed its predictability, a strong O2-IPV connection and predictability for IPV in the tropical Pacific. This open new routes to monitor ocean O2 through few observational sites co-located with more abundant IPV measurements in the tropical Pacific.
Anna Belcher, Sian F. Henley, Katharine Hendry, Marianne Wootton, Lisa Friberg, Ursula Dallman, Tong Wang, Christopher Coath, and Clara Manno
Biogeosciences, 20, 3573–3591, https://doi.org/10.5194/bg-20-3573-2023, https://doi.org/10.5194/bg-20-3573-2023, 2023
Short summary
Short summary
The oceans play a crucial role in the uptake of atmospheric carbon dioxide, particularly the Southern Ocean. The biological pumping of carbon from the surface to the deep ocean is key to this. Using sediment trap samples from the Scotia Sea, we examine biogeochemical fluxes of carbon, nitrogen, and biogenic silica and their stable isotope compositions. We find phytoplankton community structure and physically mediated processes are important controls on particulate fluxes to the deep ocean.
Stephanie Delacroix, Tor Jensen Nystuen, Erik Höglund, and Andrew L. King
Biogeosciences Discuss., https://doi.org/10.5194/bg-2023-138, https://doi.org/10.5194/bg-2023-138, 2023
Revised manuscript accepted for BG
Short summary
Short summary
The addition of alkaline minerals into the oceans might reduce the excessive anthropogenic CO2 emissions. Magnesium hydroxide can be added in large amount because of its low seawater solubility without reaching harmful pH levels. The toxicity effect results of magnesium hydroxide, by simulating expected concentrations from a ships’ dispersion scenario, demonstrated low impacts on both sensitive and local assemblages of marine microalgae when compared to calcium hydroxide and sodium hydroxide.
Reiner Steinfeldt, Monika Rhein, and Dagmar Kieke
Biogeosciences Discuss., https://doi.org/10.5194/bg-2023-113, https://doi.org/10.5194/bg-2023-113, 2023
Revised manuscript accepted for BG
Short summary
Short summary
We calculate the amount of anthropogenic carbon (Cant) that is stored in the Atlantic Ocean for the years 1990, 2000, 2010. Cant is the carbon that is taken up by the ocean due to the rising atmospheric CO2 concentrations as a result of manmade CO2 emissions. However, most of the carbon in the ocean is natural. In order to determine the amount of Cant, we apply a special technique which is based on the observation of other manmade gases (e.g. CFCs).
Asmita Singh, Susanne Fietz, Sandy J. Thomalla, Nicolas Sanchez, Murat V. Ardelan, Sébastien Moreau, Hanna M. Kauko, Agneta Fransson, Melissa Chierici, Saumik Samanta, Thato N. Mtshali, Alakendra N. Roychoudhury, and Thomas J. Ryan-Keogh
Biogeosciences, 20, 3073–3091, https://doi.org/10.5194/bg-20-3073-2023, https://doi.org/10.5194/bg-20-3073-2023, 2023
Short summary
Short summary
Despite the scarcity of iron in the Southern Ocean, seasonal blooms occur due to changes in nutrient and light availability. Surprisingly, during an autumn bloom in the Antarctic sea-ice zone, the results from incubation experiments showed no significant photophysiological response of phytoplankton to iron addition. This suggests that ambient iron concentrations were sufficient, challenging the notion of iron deficiency in the Southern Ocean through extended iron-replete post-bloom conditions.
Benoît Pasquier, Mark Holzer, Matthew A. Chamberlain, Richard J. Matear, Nathaniel L. Bindoff, and François W. Primeau
Biogeosciences, 20, 2985–3009, https://doi.org/10.5194/bg-20-2985-2023, https://doi.org/10.5194/bg-20-2985-2023, 2023
Short summary
Short summary
Modeling the ocean's carbon and oxygen cycles accurately is challenging. Parameter optimization improves the fit to observed tracers but can introduce artifacts in the biological pump. Organic-matter production and subsurface remineralization rates adjust to compensate for circulation biases, changing the pathways and timescales with which nutrients return to the surface. Circulation biases can thus strongly alter the system’s response to ecological change, even when parameters are optimized.
Priyanka Banerjee
Biogeosciences, 20, 2613–2643, https://doi.org/10.5194/bg-20-2613-2023, https://doi.org/10.5194/bg-20-2613-2023, 2023
Short summary
Short summary
This study shows that atmospheric deposition is the most important source of iron to the upper northern Indian Ocean for phytoplankton growth. This is followed by iron from continental-shelf sediment. Phytoplankton increase following iron addition is possible only with high background levels of nitrate. Vertical mixing is the most important physical process supplying iron to the upper ocean in this region throughout the year. The importance of ocean currents in supplying iron varies seasonally.
Iris Kriest, Julia Getzlaff, Angela Landolfi, Volkmar Sauerland, Markus Schartau, and Andreas Oschlies
Biogeosciences, 20, 2645–2669, https://doi.org/10.5194/bg-20-2645-2023, https://doi.org/10.5194/bg-20-2645-2023, 2023
Short summary
Short summary
Global biogeochemical ocean models are often subjectively assessed and tuned against observations. We applied different strategies to calibrate a global model against observations. Although the calibrated models show similar tracer distributions at the surface, they differ in global biogeochemical fluxes, especially in global particle flux. Simulated global volume of oxygen minimum zones varies strongly with calibration strategy and over time, rendering its temporal extrapolation difficult.
John C. Tracey, Andrew R. Babbin, Elizabeth Wallace, Xin Sun, Katherine L. DuRussel, Claudia Frey, Donald E. Martocello III, Tyler Tamasi, Sergey Oleynik, and Bess B. Ward
Biogeosciences, 20, 2499–2523, https://doi.org/10.5194/bg-20-2499-2023, https://doi.org/10.5194/bg-20-2499-2023, 2023
Short summary
Short summary
Nitrogen (N) is essential for life; thus, its availability plays a key role in determining marine productivity. Using incubations of seawater spiked with a rare form of N measurable on a mass spectrometer, we quantified microbial pathways that determine marine N availability. The results show that pathways that recycle N have higher rates than those that result in its loss from biomass and present new evidence for anaerobic nitrite oxidation, a process long thought to be strictly aerobic.
Amanda Gerotto, Hongrui Zhang, Renata Hanae Nagai, Heather M. Stoll, Rubens César Lopes Figueira, Chuanlian Liu, and Iván Hernández-Almeida
Biogeosciences, 20, 1725–1739, https://doi.org/10.5194/bg-20-1725-2023, https://doi.org/10.5194/bg-20-1725-2023, 2023
Short summary
Short summary
Based on the analysis of the response of coccolithophores’ morphological attributes in a laboratory dissolution experiment and surface sediment samples from the South China Sea, we proposed that the thickness shape (ks) factor of fossil coccoliths together with the normalized ks variation, which is the ratio of the standard deviation of ks (σ) over the mean ks (σ/ks), is a robust and novel proxy to reconstruct past changes in deep ocean carbon chemistry.
Katherine E. Turner, Doug M. Smith, Anna Katavouta, and Richard G. Williams
Biogeosciences, 20, 1671–1690, https://doi.org/10.5194/bg-20-1671-2023, https://doi.org/10.5194/bg-20-1671-2023, 2023
Short summary
Short summary
We present a new method for reconstructing ocean carbon using climate models and temperature and salinity observations. To test this method, we reconstruct modelled carbon using synthetic observations consistent with current sampling programmes. Sensitivity tests show skill in reconstructing carbon trends and variability within the upper 2000 m. Our results indicate that this method can be used for a new global estimate for ocean carbon content.
Alexandre Mignot, Hervé Claustre, Gianpiero Cossarini, Fabrizio D'Ortenzio, Elodie Gutknecht, Julien Lamouroux, Paolo Lazzari, Coralie Perruche, Stefano Salon, Raphaëlle Sauzède, Vincent Taillandier, and Anna Teruzzi
Biogeosciences, 20, 1405–1422, https://doi.org/10.5194/bg-20-1405-2023, https://doi.org/10.5194/bg-20-1405-2023, 2023
Short summary
Short summary
Numerical models of ocean biogeochemistry are becoming a major tool to detect and predict the impact of climate change on marine resources and monitor ocean health. Here, we demonstrate the use of the global array of BGC-Argo floats for the assessment of biogeochemical models. We first detail the handling of the BGC-Argo data set for model assessment purposes. We then present 23 assessment metrics to quantify the consistency of BGC model simulations with respect to BGC-Argo data.
Alban Planchat, Lester Kwiatkowski, Laurent Bopp, Olivier Torres, James R. Christian, Momme Butenschön, Tomas Lovato, Roland Séférian, Matthew A. Chamberlain, Olivier Aumont, Michio Watanabe, Akitomo Yamamoto, Andrew Yool, Tatiana Ilyina, Hiroyuki Tsujino, Kristen M. Krumhardt, Jörg Schwinger, Jerry Tjiputra, John P. Dunne, and Charles Stock
Biogeosciences, 20, 1195–1257, https://doi.org/10.5194/bg-20-1195-2023, https://doi.org/10.5194/bg-20-1195-2023, 2023
Short summary
Short summary
Ocean alkalinity is critical to the uptake of atmospheric carbon and acidification in surface waters. We review the representation of alkalinity and the associated calcium carbonate cycle in Earth system models. While many parameterizations remain present in the latest generation of models, there is a general improvement in the simulated alkalinity distribution. This improvement is related to an increase in the export of biotic calcium carbonate, which closer resembles observations.
Jérôme Pinti, Tim DeVries, Tommy Norin, Camila Serra-Pompei, Roland Proud, David A. Siegel, Thomas Kiørboe, Colleen M. Petrik, Ken H. Andersen, Andrew S. Brierley, and André W. Visser
Biogeosciences, 20, 997–1009, https://doi.org/10.5194/bg-20-997-2023, https://doi.org/10.5194/bg-20-997-2023, 2023
Short summary
Short summary
Large numbers of marine organisms such as zooplankton and fish perform daily vertical migration between the surface (at night) and the depths (in the daytime). This fascinating migration is important for the carbon cycle, as these organisms actively bring carbon to depths where it is stored away from the atmosphere for a long time. Here, we quantify the contributions of different animals to this carbon drawdown and storage and show that fish are important to the biological carbon pump.
Alastair J. M. Lough, Alessandro Tagliabue, Clément Demasy, Joseph A. Resing, Travis Mellett, Neil J. Wyatt, and Maeve C. Lohan
Biogeosciences, 20, 405–420, https://doi.org/10.5194/bg-20-405-2023, https://doi.org/10.5194/bg-20-405-2023, 2023
Short summary
Short summary
Iron is a key nutrient for ocean primary productivity. Hydrothermal vents are a source of iron to the oceans, but the size of this source is poorly understood. This study examines the variability in iron inputs between hydrothermal vents in different geological settings. The vents studied release different amounts of Fe, resulting in plumes with similar dissolved iron concentrations but different particulate concentrations. This will help to refine modelling of iron-limited ocean productivity.
Nicole M. Travis, Colette L. Kelly, Margaret R. Mulholland, and Karen L. Casciotti
Biogeosciences, 20, 325–347, https://doi.org/10.5194/bg-20-325-2023, https://doi.org/10.5194/bg-20-325-2023, 2023
Short summary
Short summary
The primary nitrite maximum is a ubiquitous upper ocean feature where nitrite accumulates, but we still do not understand its formation and the co-occurring microbial processes involved. Using correlative methods and rates measurements, we found strong spatial patterns between environmental conditions and depths of the nitrite maxima, but not the maximum concentrations. Nitrification was the dominant source of nitrite, with occasional high nitrite production from phytoplankton near the coast.
Natacha Le Grix, Jakob Zscheischler, Keith B. Rodgers, Ryohei Yamaguchi, and Thomas L. Frölicher
Biogeosciences, 19, 5807–5835, https://doi.org/10.5194/bg-19-5807-2022, https://doi.org/10.5194/bg-19-5807-2022, 2022
Short summary
Short summary
Compound events threaten marine ecosystems. Here, we investigate the potentially harmful combination of marine heatwaves with low phytoplankton productivity. Using satellite-based observations, we show that these compound events are frequent in the low latitudes. We then investigate the drivers of these compound events using Earth system models. The models share similar drivers in the low latitudes but disagree in the high latitudes due to divergent factors limiting phytoplankton production.
Abigale M. Wyatt, Laure Resplandy, and Adrian Marchetti
Biogeosciences, 19, 5689–5705, https://doi.org/10.5194/bg-19-5689-2022, https://doi.org/10.5194/bg-19-5689-2022, 2022
Short summary
Short summary
Marine heat waves (MHWs) are a frequent event in the northeast Pacific, with a large impact on the region's ecosystems. Large phytoplankton in the North Pacific Transition Zone are greatly affected by decreased nutrients, with less of an impact in the Alaskan Gyre. For small phytoplankton, MHWs increase the spring small phytoplankton population in both regions thanks to reduced light limitation. In both zones, this results in a significant decrease in the ratio of large to small phytoplankton.
Margot C. F. Debyser, Laetitia Pichevin, Robyn E. Tuerena, Paul A. Dodd, Antonia Doncila, and Raja S. Ganeshram
Biogeosciences, 19, 5499–5520, https://doi.org/10.5194/bg-19-5499-2022, https://doi.org/10.5194/bg-19-5499-2022, 2022
Short summary
Short summary
We focus on the exchange of key nutrients for algae production between the Arctic and Atlantic oceans through the Fram Strait. We show that the export of dissolved silicon here is controlled by the availability of nitrate which is influenced by denitrification on Arctic shelves. We suggest that any future changes in the river inputs of silica and changes in denitrification due to climate change will impact the amount of silicon exported, with impacts on Atlantic algal productivity and ecology.
Emily J. Zakem, Barbara Bayer, Wei Qin, Alyson E. Santoro, Yao Zhang, and Naomi M. Levine
Biogeosciences, 19, 5401–5418, https://doi.org/10.5194/bg-19-5401-2022, https://doi.org/10.5194/bg-19-5401-2022, 2022
Short summary
Short summary
We use a microbial ecosystem model to quantitatively explain the mechanisms controlling observed relative abundances and nitrification rates of ammonia- and nitrite-oxidizing microorganisms in the ocean. We also estimate how much global carbon fixation can be associated with chemoautotrophic nitrification. Our results improve our understanding of the controls on nitrification, laying the groundwork for more accurate predictions in global climate models.
Zuozhu Wen, Thomas J. Browning, Rongbo Dai, Wenwei Wu, Weiying Li, Xiaohua Hu, Wenfang Lin, Lifang Wang, Xin Liu, Zhimian Cao, Haizheng Hong, and Dalin Shi
Biogeosciences, 19, 5237–5250, https://doi.org/10.5194/bg-19-5237-2022, https://doi.org/10.5194/bg-19-5237-2022, 2022
Short summary
Short summary
Fe and P are key factors controlling the biogeography and activity of marine N2-fixing microorganisms. We found lower abundance and activity of N2 fixers in the northern South China Sea than around the western boundary of the North Pacific, and N2 fixation rates switched from Fe–P co-limitation to P limitation. We hypothesize the Fe supply rates and Fe utilization strategies of each N2 fixer are important in regulating spatial variability in community structure across the study area.
Claudia Eisenring, Sophy E. Oliver, Samar Khatiwala, and Gregory F. de Souza
Biogeosciences, 19, 5079–5106, https://doi.org/10.5194/bg-19-5079-2022, https://doi.org/10.5194/bg-19-5079-2022, 2022
Short summary
Short summary
Given the sparsity of observational constraints on micronutrients such as zinc (Zn), we assess the sensitivities of a framework for objective parameter optimisation in an oceanic Zn cycling model. Our ensemble of optimisations towards synthetic data with varying kinds of uncertainty shows that deficiencies related to model complexity and the choice of the misfit function generally have a greater impact on the retrieval of model Zn uptake behaviour than does the limitation of data coverage.
Yoshikazu Sasai, Sherwood Lan Smith, Eko Siswanto, Hideharu Sasaki, and Masami Nonaka
Biogeosciences, 19, 4865–4882, https://doi.org/10.5194/bg-19-4865-2022, https://doi.org/10.5194/bg-19-4865-2022, 2022
Short summary
Short summary
We have investigated the adaptive response of phytoplankton growth to changing light, nutrients, and temperature over the North Pacific using two physical-biological models. We compare modeled chlorophyll and primary production from an inflexible control model (InFlexPFT), which assumes fixed carbon (C):nitrogen (N):chlorophyll (Chl) ratios, to a recently developed flexible phytoplankton functional type model (FlexPFT), which incorporates photoacclimation and variable C:N:Chl ratios.
Jens Terhaar, Thomas L. Frölicher, and Fortunat Joos
Biogeosciences, 19, 4431–4457, https://doi.org/10.5194/bg-19-4431-2022, https://doi.org/10.5194/bg-19-4431-2022, 2022
Short summary
Short summary
Estimates of the ocean sink of anthropogenic carbon vary across various approaches. We show that the global ocean carbon sink can be estimated by three parameters, two of which approximate the ocean ventilation in the Southern Ocean and the North Atlantic, and one of which approximates the chemical capacity of the ocean to take up carbon. With observations of these parameters, we estimate that the global ocean carbon sink is 10 % larger than previously assumed, and we cut uncertainties in half.
Natasha René van Horsten, Hélène Planquette, Géraldine Sarthou, Thomas James Ryan-Keogh, Nolwenn Lemaitre, Thato Nicholas Mtshali, Alakendra Roychoudhury, and Eva Bucciarelli
Biogeosciences, 19, 3209–3224, https://doi.org/10.5194/bg-19-3209-2022, https://doi.org/10.5194/bg-19-3209-2022, 2022
Short summary
Short summary
The remineralisation proxy, barite, was measured along 30°E in the southern Indian Ocean during early austral winter. To our knowledge this is the first reported Southern Ocean winter study. Concentrations throughout the water column were comparable to observations during spring to autumn. By linking satellite primary production to this proxy a possible annual timescale is proposed. These findings also suggest possible carbon remineralisation from satellite data on a basin scale.
Zhibo Shao and Ya-Wei Luo
Biogeosciences, 19, 2939–2952, https://doi.org/10.5194/bg-19-2939-2022, https://doi.org/10.5194/bg-19-2939-2022, 2022
Short summary
Short summary
Non-cyanobacterial diazotrophs (NCDs) may be an important player in fixing N2 in the ocean. By conducting meta-analyses, we found that a representative marine NCD phylotype, Gamma A, tends to inhabit ocean environments with high productivity, low iron concentration and high light intensity. It also appears to be more abundant inside cyclonic eddies. Our study suggests a niche differentiation of NCDs from cyanobacterial diazotrophs as the latter prefers low-productivity and high-iron oceans.
Coraline Leseurre, Claire Lo Monaco, Gilles Reverdin, Nicolas Metzl, Jonathan Fin, Claude Mignon, and Léa Benito
Biogeosciences, 19, 2599–2625, https://doi.org/10.5194/bg-19-2599-2022, https://doi.org/10.5194/bg-19-2599-2022, 2022
Short summary
Short summary
Decadal trends of fugacity of CO2 (fCO2), total alkalinity (AT), total carbon (CT) and pH in surface waters are investigated in different domains of the southern Indian Ocean (45°S–57°S) from ongoing and station observations regularly conducted in summer over the period 1998–2019. The fCO2 increase and pH decrease are mainly driven by anthropogenic CO2 estimated just below the summer mixed layer, as well as by a warming south of the polar front or in the fertilized waters near Kerguelen Island.
Priscilla Le Mézo, Jérôme Guiet, Kim Scherrer, Daniele Bianchi, and Eric Galbraith
Biogeosciences, 19, 2537–2555, https://doi.org/10.5194/bg-19-2537-2022, https://doi.org/10.5194/bg-19-2537-2022, 2022
Short summary
Short summary
This study quantifies the role of commercially targeted fish biomass in the cycling of three important nutrients (N, P, and Fe), relative to nutrients otherwise available in water and to nutrients required by primary producers, and the impact of fishing. We use a model of commercially targeted fish biomass constrained by fish catch and stock assessment data to assess the contributions of fish at the global scale, at the time of the global peak catch and prior to industrial fishing.
Rebecca Chmiel, Nathan Lanning, Allison Laubach, Jong-Mi Lee, Jessica Fitzsimmons, Mariko Hatta, William Jenkins, Phoebe Lam, Matthew McIlvin, Alessandro Tagliabue, and Mak Saito
Biogeosciences, 19, 2365–2395, https://doi.org/10.5194/bg-19-2365-2022, https://doi.org/10.5194/bg-19-2365-2022, 2022
Short summary
Short summary
Dissolved cobalt is present in trace amounts in seawater and is a necessary nutrient for marine microbes. On a transect from the Alaskan coast to Tahiti, we measured seawater concentrations of dissolved cobalt. Here, we describe several interesting features of the Pacific cobalt cycle including cobalt sources along the Alaskan coast and Hawaiian vents, deep-ocean particle formation, cobalt activity in low-oxygen regions, and how our samples compare to a global biogeochemical model’s predictions.
Nicolas Metzl, Claire Lo Monaco, Coraline Leseurre, Céline Ridame, Jonathan Fin, Claude Mignon, Marion Gehlen, and Thi Tuyet Trang Chau
Biogeosciences, 19, 1451–1468, https://doi.org/10.5194/bg-19-1451-2022, https://doi.org/10.5194/bg-19-1451-2022, 2022
Short summary
Short summary
During an oceanographic cruise conducted in January 2020 in the south-western Indian Ocean, we observed very low CO2 concentrations associated with a strong phytoplankton bloom that occurred south-east of Madagascar. This biological event led to a strong regional CO2 ocean sink not previously observed.
Darren R. Clark, Andrew P. Rees, Charissa M. Ferrera, Lisa Al-Moosawi, Paul J. Somerfield, Carolyn Harris, Graham D. Quartly, Stephen Goult, Glen Tarran, and Gennadi Lessin
Biogeosciences, 19, 1355–1376, https://doi.org/10.5194/bg-19-1355-2022, https://doi.org/10.5194/bg-19-1355-2022, 2022
Short summary
Short summary
Measurements of microbial processes were made in the sunlit open ocean during a research cruise (AMT19) between the UK and Chile. These help us to understand how microbial communities maintain the function of remote ecosystems. We find that the nitrogen cycling microbes which produce nitrite respond to changes in the environment. Our insights will aid the development of models that aim to replicate and ultimately project how marine environments may respond to ongoing climate change.
Martí Galí, Marcus Falls, Hervé Claustre, Olivier Aumont, and Raffaele Bernardello
Biogeosciences, 19, 1245–1275, https://doi.org/10.5194/bg-19-1245-2022, https://doi.org/10.5194/bg-19-1245-2022, 2022
Short summary
Short summary
Part of the organic matter produced by plankton in the upper ocean is exported to the deep ocean. This process, known as the biological carbon pump, is key for the regulation of atmospheric carbon dioxide and global climate. However, the dynamics of organic particles below the upper ocean layer are not well understood. Here we compared the measurements acquired by autonomous robots in the top 1000 m of the ocean to a numerical model, which can help improve future climate projections.
Marie Barbieux, Julia Uitz, Alexandre Mignot, Collin Roesler, Hervé Claustre, Bernard Gentili, Vincent Taillandier, Fabrizio D'Ortenzio, Hubert Loisel, Antoine Poteau, Edouard Leymarie, Christophe Penkerc'h, Catherine Schmechtig, and Annick Bricaud
Biogeosciences, 19, 1165–1194, https://doi.org/10.5194/bg-19-1165-2022, https://doi.org/10.5194/bg-19-1165-2022, 2022
Short summary
Short summary
This study assesses marine biological production in two Mediterranean systems representative of vast desert-like (oligotrophic) areas encountered in the global ocean. We use a novel approach based on non-intrusive high-frequency in situ measurements by two profiling robots, the BioGeoChemical-Argo (BGC-Argo) floats. Our results indicate substantial yet variable production rates and contribution to the whole water column of the subsurface layer, typically considered steady and non-productive.
Filippa Fransner, Friederike Fröb, Jerry Tjiputra, Nadine Goris, Siv K. Lauvset, Ingunn Skjelvan, Emil Jeansson, Abdirahman Omar, Melissa Chierici, Elizabeth Jones, Agneta Fransson, Sólveig R. Ólafsdóttir, Truls Johannessen, and Are Olsen
Biogeosciences, 19, 979–1012, https://doi.org/10.5194/bg-19-979-2022, https://doi.org/10.5194/bg-19-979-2022, 2022
Short summary
Short summary
Ocean acidification, a direct consequence of the CO2 release by human activities, is a serious threat to marine ecosystems. In this study, we conduct a detailed investigation of the acidification of the Nordic Seas, from 1850 to 2100, by using a large set of samples taken during research cruises together with numerical model simulations. We estimate the effects of changes in different environmental factors on the rate of acidification and its potential effects on cold-water corals.
Cited articles
Antezana, T.: Adaptive behavior of Euphausia mucronata in relation to the oxygen minimum layer of the Humboldt Current, in: Oceanography of the Eastern Pacific, edited by: Färber-Lorda, J., Vol II. Editorial CICESE, Ensenada, 29–40, 2002.
Antezana, T.: Species-specific patterns of diel migration into the Oxygen Minimum Zone by euphausiids in the Humboldt Current Ecosystem, Progr. Oceanogr., 83, 228–236, 2009.
Antezana, T.: Euphausia mucronata: A keystone herbivore and prey of the Humboldt Current System, Deep-Sea Res. Pt. II, 57, 652–662, 2010.
Bianchi, D., Dunne, J., Sarmiento, J., and Galbraith, E.: Data-based estimates of suboxia, denitrification and N2O production in the ocean, and their sensitivities to change, Global Biogeochem. Cy., 26, 6550–6555, 2012.
Bianchi, D., Babbin, A. R., and Galbraith, E. D.: Enhancement of anammox by the excretion of diel vertical migrators, P. Natl. Acad. Sci. USA, 111, 15653–15658, 2014.
Bograd, S. J., Castro, C. G., Di Lorenzo, E., Palacios, D. M., Bailey, H., Gilly, W., and Chavez, F. P.: Oxygen declines and the shoaling of the hypoxic boundary in the California Current, Geophys. Res. Lett., 35, L12607, https://doi.org/10.1029/2008GL034185, 2008.
Bopp, L., Resplandy, L., Orr, J. C., Doney, S. C., Dunne, J. P., Gehlen, M., Halloran, P., Heinze, C., Ilyina, T., Séférian, R., Tjiputra, J., and Vichi, M.: Multiple stressors of ocean ecosystems in the 21st century: projections with CMIP5 models, Biogeosciences, 10, 6225–6245, https://doi.org/10.5194/bg-10-6225-2013, 2013.
Brandt, P., Bange, H. W., Banyte, D., Dengler, M., Didwischus, S.-H., Fischer, T., Greatbatch, R. J., Hahn, J., Kanzow, T., Karstensen, J., Körtzinger, A., Krahmann, G., Schmidtko, S., Stramma, L., Tanhua, T., and Visbeck, M.: On the role of circulation and mixing in the ventilation of oxygen minimum zones with a focus on the eastern tropical North Atlantic, Biogeosciences, 12, 489–512, https://doi.org/10.5194/bg-12-489-2015, 2015.
Cass, C. J. and Daly K. L.: Eucalanoid copepod metabolic rates in the oxygen minimum zone of the eastern tropical north Pacific: Effects of oxygen and temperature, Deep-Sea Res. Pt. I, 94, 137–149, 2014.
Chahsavar-Archard, V. and Razouls, C.: Les copépodes pélagiques au sud-est des iles du Cap Vert, I. Aspects qualitatifs (Mission Guidôme du N.O. “J. Charcot”, septembre-octobre 1976), Vie Milieu, 32, 25–45, 1982.
Childress, J. J.: The respiratory rates of midwater crustaceans as a function of depth of occurrence and relation to the oxygen minimum layer off Southern California, Comp. Biochem. Physiol., 50, 787–799, 1975.
Childress, J. J. and Seibel, B. A.: Life at stable low oxygen levels: Adaptations of animals to oceanic oxygen minimum layers, J. Exp. Biol., 201, 1223–1232, 1998.
Cocco, V., Joos, F., Steinacher, M., Frölicher, T. L., Bopp, L., Dunne, J., Gehlen, M., Heinze, C., Orr, J., Oschlies, A., Schneider, B., Segschneider, J., and Tjiputra, J.: Oxygen and indicators of stress for marine life in multi-model global warming projections, Biogeosciences, 10, 1849–1868, https://doi.org/10.5194/bg-10-1849-2013, 2013.
Deutsch, C., Ferrel, A., Seibel, B. A., Pörtner, H.-O., and Huey, R. B.: Climate change tightens a metabolic constraint on marine habitats, Science, 348, 1132–1135, 2015.
Dagg, M., Cowles, T., Whitledge, T., Smith, S., Howe, S., and Judkins, D.: Grazing and excretion by zooplankton in the Peru upwelling system during April 1977, Deep-Sea Res., 27, 43–59, 1980.
Davison, P., Checkley Jr., D. M., Koslow, J., and Barlow, J.: Carbon export mediated by mesopelagic fishes in the northeast Pacific Ocean, Prog. Oceanogr., 116, 14–30, 2013.
Donnelly, J. and Torres, J. J.: Oxygen consumption of midwater fishes and crustaceans from the eastern Gulf of Mexico, Mar. Biol., 97, 483–494, 1988.
Escribano, R., Hidalgo, P., and Krautz, C.: Zooplankton associated with the oxygen minimum zone system in the norther upwelling region of Chile during March 2000, Deep-Sea Res. Pt. II, 56, 1083–1094, 2009.
Ekau, W., Auel, H., Pörtner, H.-O., and Gilbert, D.: Impacts of hypoxia on the structure and processes in pelagic communities (zooplankton, macro-invertebrates and fish), Biogeosciences, 7, 1669–1699, https://doi.org/10.5194/bg-7-1669-2010, 2010.
Fischer, J. and Visbeck, M.: Seasonal variation of the daily zooplankton migration in the Greenland Sea, Deep-Sea Res. Pt. I, 40, 1547–1557, 1993.
Hagerman, L. and Szaniawska, A.: Haemolymph nitrogen compounds and ammonia efflux rates under anoxia in the brackish water isopod Saduria entomon, Mar. Ecol.-Prog. Ser., 103, 285–289, 1994.
Hagerman, L., Søndergard, T., Weile, K., Hosie, D., and Uglow, R. F.: Aspects of blood physiology and ammonia excretion in Nephrops norvegicus under hypoxia, Comp. Biochem. Physiol., 97, 51–55, 1990.
Hauss, H., Franz, J. M. S., and Sommer, U.: Changes in N:P stoichiometry influence taxonomic composition and nutritional quality of phytoplankton in the Peruvian upwelling, J. Sea Res., 73, 74–85, 2012.
Heywood, K. J.: Diel vertical migration of zooplankton in the Northeast Atlantic, J. Plankton Res., 18, 163–184, 1996.
Hidaka, K., Kawaguchi, K., Murakami, M., and Takahashi, M.: Downward transport of organic carbon by diel migratory micronekton in the western equatorial Pacific: Its quantitative and qualitative importance, Deep-Sea Res. Pt. I, 48, 1923–1939, 2001.
Hofmann, A. F., Soetaert, K., Middelburg, J. J., and Meysman F. J. R.: AquaEnv: An aquatic acid-base modelling environment in R, Aquat. Geochem., 16, 507–546, 2010.
Holmes, R. M., Aminot, A., Kérouel, R., Hooker, B. A., and Peterson, B. J.: A simple and precise method for measuring ammonium in marine and freshwater ecosystems, Can. J. Fish. Aquat. Sci., 56, 1801–1808, 1999.
Ikeda, T.: Respiration and ammonia excretion by marine metazooplankton taxa: synthesis toward a global-bathymetric model, Mar. Biol., 161, 2753–2766, 2014.
Isari, S., Zervoudaki, S., Saiz, E., Pelejero, C., and Peters, J.: Copepod vital rates under CO2-induced acidification: a calanoid species and a cyclopoid species under short-term exposures, J. Plankton Res., 37, 912–922, https://doi.org/10.1093/plankt/fbv057, 2015.
Kalvelage, T., Jensen, M. M., Contreras, S., Revsbeck, N. P., Lam, P., Günter, M., LaRoche, J., Lavik, G., and Kuypers, M. M. M.: Oxygen sensitivity of anammox and coupled N-cycle processes in oxygen minimum zones, PLoS ONE, 6, e29299, https://doi.org/10.1371/journal.pone.0029299, 2011.
Karstensen, J., Stramma, L., and Visbeck, M.: Oxygen minimum zones in the eastern tropical Atlantic and Pacific oceans, Prog. Oceanogr., 77, 331–350, 2008.
Karstensen, J., Fiedler, B., Schütte, F., Brandt, P., Körtzinger, A., Fischer, G., Zantopp, R., Hahn, J., Visbeck, M., and Wallace, D.: Open ocean dead zones in the tropical North Atlantic Ocean, Biogeosciences, 12, 2597–2605, https://doi.org/10.5194/bg-12-2597-2015, 2015.
Keeling, R. F., Körtzinger, A., and Gruber, N.: Ocean deoxygenation in a warming world, Ann. Rev. Mar. Sci., 2, 199–229, 2010.
Kiko, R., Hauss, H., Dengler, M., Sommer, S., and Melzner, F.: The squat lobster Pleuroncodes monodon tolerates anoxic “dead zone” conditions off Peru, Mar. Biol., 162, 1913–1921, https://doi.org/10.1007/s00227-015-2709-6, 2015a.
Kiko, R., Hauss, H., Buchholz, F., and Melzner, F.: Ammonium excretion and respiration rate of tropical copepods and euphausiids measured during METEOR cruise M93, M97 and Maria S. Merian cruise MSM22, PANGAE, available at: https://doi.pangaea.de/10.1594/PANGAEA.853919, 2015b.
Kroeker, K. J., Kordas, R. L., Crim, R. N., and Singh, G. G.: Meta-analysis reveals negative yet variable effects of ocean acidification on marine organisms, Ecol. Lett., 13, 1419–1434, 2010.
Lampert, W.: The adaptive significance of diel vertical migration of zooplankton, Funct. Ecol., 3, 21–27, 1989
Longhurst, A. R., Bedo, A. W., Harrison, W. G., Head, E. J. H., and Sameoto, D. D.: Vertical flux of respiratory carbon by oceanic diel migrant biota, Deep-Sea Res. Pt. I, 37, 685–694, 1990.
Maas, A. E., Wishner, K. F., and Seibel, B. A.: The metabolic response of pteropods to acidification reflects natural CO2-exposure in oxygen minimum zones, Biogeosciences, 9, 747–757, https://doi.org/10.5194/bg-9-747-2012, 2012a.
Maas, A. E., Wishner, K. F., and Seibel, B. A.: Metabolic suppression in thecosomatous pteropods as an effect of low temperature and hypoxia in the eastern tropical North Pacific, Mar. Biol., 159, 1955–1967, 2012b.
Marshall, D. J., Bode, M., and White, C. R.: Estimating physiological tolerances – a comparison of traditional approaches to nonlinear regression techniques, J. Exp. Biol., 216, 2176–2182, 2013.
Melzner, F., Thomsen, J., Koeve, W., Oschlies, A., Gutowska, M., Bange, H. W., Hansen, H. P., and Körtzinger A.: Future ocean acidification will be amplified by hypoxia in coastal habitats, Mar. Biol., 160, 1875–1888, 2013.
Meyer, J., Löscher, C. R., Neulinger, S. C., Reichel, A. F., Loginova, A., Borchard, C., Schmitz, R. A., Hauss, H., Kiko, R., and Riebesell, U.: Changing nutrient stoichiometry affects phytoplankton production, DOP accumulation and dinitrogen fixation – a mesocosm experiment in the eastern tropical North Atlantic, Biogeosciences, 13, 781–794, https://doi.org/10.5194/bg-13-781-2016, 2016.
Moloney, C. L. and Field, J. G.: General allometric equations for rates of nutrient uptake, ingestion, and respiration in plankton organisms, Limnol. Oceanogr., 34, 1290–1299, 1989.
Morris, D. J., Ward, P., and Clarke, A.: Some aspects of feeding in the Antarctic krill, Euphausia superba, Polar Biol., 2, 21–26, 1983.
Paulmier, A., Ruiz-Pino, D., and Garçon, V.: CO2 maximum in the oxygen minimum zone (OMZ), Biogeosciences, 8, 239–252, https://doi.org/10.5194/bg-8-239-2011, 2011.
Pierrot, D., Lewis, E., and Wallace, D. W. R.: MS Excel Program Developed for CO2 System Calculations, ORNL/CDIAC-105a, Carbon Dioxide Information Analysis Center, Oak Ridge National Laboratory, US Department of Energy, Oak Ridge, Tennessee, 2006.
Prosser, C. L.: Oxygen: respiration and metabolism, in: Comparative animal physiology, edited by: Prosser, C. L. and Brown, F. A., Saunders, Philadelphia, 165–211, 1961.
Putzeys, S.: Carbon active fluxes in the Northeast Atlantic subtropical gyre, PhD Thesis, Univ. de Las Palmas de Gran Canaria, available at: http://hdl.handle.net/10553/11069 (last access: 9 July 2015), 2013.
Razouls, C., de Bovée, F., Kouwenberg, J., and Desreumaux, N.: Diversity and Geographic Distribution of Marine Planktonic Copepods, 2005–2015, available at: http://copepodes.obs-banyuls.fr/en, last access: 4 August 2015.
Richards, J. G.: Physiological, behavioral and biochemical adaptations of intertidal fishes to hypoxia, J. Exp. Biol., 214, 191–199, 2011.
Rosa, R. and Seibel, B. A.: Synergistic effects of climate-related variables suggest future physiological impairment in a top oceanic predator, Proc. Nat. Acad. Sci. USA, 105, 20776–20780, 2008.
Rosas, C., Martinez, E., Gaxiola, G., Brito, R., Sánchez, A., and Soto, L. A.: The effect of dissolved oxygen and salinity on oxygen consumption, ammonia excretion and osmotic pressure of Penaeus setiferus (Linnaeus) juveniles, J. Exp. Mar. Biol. Ecol., 234, 41–57, 1999.
Saba, G. K., Schofield, O., Torres, J. J., Ombres, E. H., and Steinberg, D. K.: Increased feeding and nutrient excretion of adult Antarctic krill, Euphausia superba, exposed to enhanced carbon dioxide (CO2), Plos One, 7, e52224, https://doi.org/10.1371/journal.pone.0052224, 2012.
Seibel, B. A.: Critical oxygen levels and metabolic suppression in oceanic oxygen minimum zones, J. Exp. Biol., 214, 326–336, 2011.
Semenova, T. N., Timonin, A. G., and Flint, M. V.: Characteristic features of the lateral and vertical distributions of abundant zooplankton species near the Peruvian coast, Oceanology, 22, 216–220, 1982.
Siegel, V.: Euphausia gibboides Ortmann, 1893, in: World Euphausiacea database, 2015, edited by: Siegel, V., World Register of Marine Species at http://www.marinespecies.org/aphia.php?p=taxdetails&id=110684, last access: 9 July 2015.
Steinberg, D. K., Carlson, C. A., Bates, N. R., Goldthwait, S. A., Madin, L. P., and Michaels, A. F.: Zooplankton vertical migration and the active transport of dissolved organic and inorganic carbon in the Sargasso Sea, Deep-Sea Res. Pt. I, 47, 137–158, 2000.
Steinberg, D. K., Goldthwait, S. A., and Hansell, D. A.: Zooplankton vertical migration and the active transport of dissolved organic and inorganic nitrogen in the Sargasso Sea, Deep-Sea Res. Pt. I, 49, 1445–1461, 2002.
Stramma, L., Johnson, G. C., Sprintall, J., and Mohrholz, V.: Expanding Oxygen-Minimum Zones in the Tropical Oceans, Science, 320, 655–658, 2008.
Stramma, L., Prince, E. D., Schmidtko, S., Luo, J., Hoolihan, J. P., Visbeck, M., Wallace, D. W. R., Brandt, P., and Körtzinger, A.: Expansion of oxygen minimum zones may reduce available habitat for tropical pelagic fishes, Nature Climate Change, 2, 33–37, 2012.
Svetlichny, L., Hubareva, E., and Arashkevich, E.: Physiological and behavioural response to hypoxia in active and diapausing stage V copepodites of Calanus euxinus, Arch. Hydrobiol. Spec. Issues Adv. Limnol., 52, 507–519, 1998.
Teal, J. M. and Carey, F. G.: Respiration of a Euphausiid from the Oxygen Minimum Layer, Limnol. Oceanogr., 12, 548–550, 1967.
Thamdrup, B., Dalsgaard, T., and Revsbech, N. P.: Widespread functional anoxia in the oxygen minimum zone of the Eastern South Pacific, Deep-Sea Res. Pt. I, 65, 36–45, 2012.
Thomsen, J. and Melzner, F.: Moderate seawater acidification does not elicit long-term metabolic depression in the blue mussel Mytilus edulis, Mar. Biol., 157, 2667–2676, 2010.
Thor, P. and Dupont, S.: Transgenerational effects alleviate severe fecundity loss during ocean acidification in a ubiquitous planktonic copepod, Glob. Change Biol., 21, 2261–2271, 2015.
Thor, P. and Oliva, E. O.: Ocean acidification elicits different energetic responses in an Arctic and a boreal population of the copepod Pseudocalanus acuspes, Mar. Biol., 162, 799–807, 2015.
Tremblay, N., Werner, T., Huenerlage, K., Buchholz, F., Abele, D., Meyer, B., and Brey, T.: Euphausiid respiration model revamped: Latitudinal and seasonal shaping effects on krill respiration rates, Ecol. Modell., 291, 233–241, 2014.
Trübenbach, K., Pegado, M. R., Seibel, B. A., and Rosa, R.: Ventilation rates and acivity levels of juvenile jumbo squid under metabolic suppression in the oxygen minimum zone, J. Exp. Biol., 216, 359–368, 2013.
Wishner, K. F., Gowing, M. M., and Gelfman, C.: Mesozooplankton biomass in the upper 1000 m in the Arabian Sea: overall seasonal and geographic patterns, and relationship to oxygen gradients, Deep-Sea Res. Pt. II, 45, 2405–2432, 1998.
WOCE Data Products Committee: WOCE Global Data, Version 3.0, WOCE International Project Office, WOCE Report No. 180/02, Southampton, UK, November 2002.
Zhang, X. S. and Dam, H. G.: Downward export of carbon by diel migrant mesozooplankton in the central equatorial Pacific, Deep-Sea Res. Pt. II, 44, 2191–2202, 1997.
Short summary
The diel vertical migration of zooplankton and nekton results in an active export of carbon and nitrogen from the oceans surface layer. In vast areas of the ocean the daytime distribution depth of migrating organisms corresponds to the core of an oxygen minimum zone (OMZ). We show that exposure to OMZ conditions can result in a strong depression of respiration and ammonium excretion in zooplankton, a fact that needs to be considered when calculating carbon and nitrogen fluxes in OMZ regions.
The diel vertical migration of zooplankton and nekton results in an active export of carbon and...
Altmetrics
Final-revised paper
Preprint