Articles | Volume 19, issue 10
https://doi.org/10.5194/bg-19-2653-2022
© Author(s) 2022. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/bg-19-2653-2022
© Author(s) 2022. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Research article
| 
30 May 2022
Research article |
| 30 May 2022
| 30 May 2022
Mass concentration measurements of autumn bioaerosol using low-cost sensors in a mature temperate woodland free-air carbon dioxide enrichment (FACE) experiment: investigating the role of meteorology and carbon dioxide levels
Aileen B. Baird
School of Geography, Earth and Environmental Sciences, University of
Birmingham, Birmingham, B152TT, UK
Birmingham Institute of Forest Research, University of Birmingham,
Birmingham, B15 2TT, UK
Edward J. Bannister
School of Geography, Earth and Environmental Sciences, University of
Birmingham, Birmingham, B152TT, UK
Birmingham Institute of Forest Research, University of Birmingham,
Birmingham, B15 2TT, UK
A. Robert MacKenzie
School of Geography, Earth and Environmental Sciences, University of
Birmingham, Birmingham, B152TT, UK
Birmingham Institute of Forest Research, University of Birmingham,
Birmingham, B15 2TT, UK
School of Geography, Earth and Environmental Sciences, University of
Birmingham, Birmingham, B152TT, UK
Birmingham Institute of Forest Research, University of Birmingham,
Birmingham, B15 2TT, UK
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Susan E. Quick, Giulio Curioni, Nicholas J. Harper, Stefan Krause, and A. Robert MacKenzie
Biogeosciences, 22, 1557–1581, https://doi.org/10.5194/bg-22-1557-2025, https://doi.org/10.5194/bg-22-1557-2025, 2025
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To study the effects of rising CO2 levels on water usage of old-growth temperate oak forest, we monitored trees in an open-air elevated CO2 experiment for 5 years. We found 4 %–16 % leaf-on season reduction in daylight water usage for ~35% increase in atmospheric CO2. July-only reduction varied more widely. Tree water usage depended on tree size, i.e. stem size and projected canopy area, across all treatments. Experimental infrastructure increased the water usage of the trees in leaf-on season.
Sophie A. Mills, Adam Milsom, Christian Pfrang, A. Rob MacKenzie, and Francis D. Pope
Atmos. Meas. Tech., 16, 4885–4898, https://doi.org/10.5194/amt-16-4885-2023, https://doi.org/10.5194/amt-16-4885-2023, 2023
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Pollen grains are important components of the atmosphere and have the potential to impact upon cloud processes via their ability to help in the formation of rain droplets. This study investigates the hygroscopicity of two different pollen species using an acoustic levitator. Pollen grains are levitated, and their response to changes in relative humidity is investigated. A key advantage of this method is that it is possible study pollen shape under varying environmental conditions.
Clarissa Baldo, Paola Formenti, Claudia Di Biagio, Gongda Lu, Congbo Song, Mathieu Cazaunau, Edouard Pangui, Jean-Francois Doussin, Pavla Dagsson-Waldhauserova, Olafur Arnalds, David Beddows, A. Robert MacKenzie, and Zongbo Shi
Atmos. Chem. Phys., 23, 7975–8000, https://doi.org/10.5194/acp-23-7975-2023, https://doi.org/10.5194/acp-23-7975-2023, 2023
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This paper presents new shortwave spectral complex refractive index and single scattering albedo data for Icelandic dust. Our results show that the imaginary part of the complex refractive index of Icelandic dust is at the upper end of the range of low-latitude dust. Furthermore, we observed that Icelandic dust is more absorbing towards the near-infrared, which we attribute to its high magnetite content. These findings are important for modeling dust aerosol radiative effects in the Arctic.
Edward J. Bannister, Mike Jesson, Nicholas J. Harper, Kris M. Hart, Giulio Curioni, Xiaoming Cai, and A. Rob MacKenzie
Atmos. Chem. Phys., 23, 2145–2165, https://doi.org/10.5194/acp-23-2145-2023, https://doi.org/10.5194/acp-23-2145-2023, 2023
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In forests, the residence time of air influences canopy chemistry and atmospheric exchange. However, there have been few field observations. We use long-term open-air CO2 enrichment measurements to show median daytime residence times are twice as long when the trees are in leaf versus when they are not. Residence times increase with increasing atmospheric stability and scale inversely with turbulence. Robust parametrisations for large-scale models are available using common distributions.
Andrea Mazzeo, Michael Burrow, Andrew Quinn, Eloise A. Marais, Ajit Singh, David Ng'ang'a, Michael J. Gatari, and Francis D. Pope
Atmos. Chem. Phys., 22, 10677–10701, https://doi.org/10.5194/acp-22-10677-2022, https://doi.org/10.5194/acp-22-10677-2022, 2022
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A modelling system for meteorology and chemistry transport processes, WRF–CHIMERE, has been tested and validated for three East African conurbations using the most up-to-date anthropogenic emissions available. Results show that the model is able to reproduce hourly and daily temporal variabilities in aerosol concentrations that are close to observations in both urban and rural environments, encouraging the adoption of numerical modelling as a tool for air quality management in East Africa.
Dimitrios Bousiotis, David C. S. Beddows, Ajit Singh, Molly Haugen, Sebastián Diez, Pete M. Edwards, Adam Boies, Roy M. Harrison, and Francis D. Pope
Atmos. Meas. Tech., 15, 4047–4061, https://doi.org/10.5194/amt-15-4047-2022, https://doi.org/10.5194/amt-15-4047-2022, 2022
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In the last decade, low-cost sensors have revolutionised the field of air quality monitoring. This paper extends the ability of low-cost sensors to not only measure air pollution, but also to understand where the pollution comes from. This "source apportionment" is a critical step in air quality management to allow for the mitigation of air pollution. The techniques developed in this paper have the potential for great impact in both research and industrial applications.
Tony Bush, Nick Papaioannou, Felix Leach, Francis D. Pope, Ajit Singh, G. Neil Thomas, Brian Stacey, and Suzanne Bartington
Atmos. Meas. Tech., 15, 3261–3278, https://doi.org/10.5194/amt-15-3261-2022, https://doi.org/10.5194/amt-15-3261-2022, 2022
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Poor air quality is a human health risk which demands high-spatiotemporal-resolution monitoring data to manage. Low-cost air quality sensors present a convenient pathway to delivering these needs, compared to traditional methods, but bring methodological challenges which can limit operational ability. In this study within Oxford, UK, we develop machine learning methods to improve the quality of low-cost sensors for NO2, PM10 (particulate matter) and PM2.5 and demonstrate their effectiveness.
Leigh R. Crilley, Louisa J. Kramer, Francis D. Pope, Chris Reed, James D. Lee, Lucy J. Carpenter, Lloyd D. J. Hollis, Stephen M. Ball, and William J. Bloss
Atmos. Chem. Phys., 21, 18213–18225, https://doi.org/10.5194/acp-21-18213-2021, https://doi.org/10.5194/acp-21-18213-2021, 2021
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Nitrous acid (HONO) is a key source of atmospheric oxidants. We evaluate if the ocean surface is a source of HONO for the marine boundary layer, using measurements from two contrasting coastal locations. We observed no evidence for a night-time ocean surface source, in contrast to previous work. This points to significant geographical variation in the predominant HONO formation mechanisms in marine environments, reflecting possible variability in the sea-surface microlayer composition.
Dimitrios Bousiotis, Francis D. Pope, David C. S. Beddows, Manuel Dall'Osto, Andreas Massling, Jakob Klenø Nøjgaard, Claus Nordstrøm, Jarkko V. Niemi, Harri Portin, Tuukka Petäjä, Noemi Perez, Andrés Alastuey, Xavier Querol, Giorgos Kouvarakis, Nikos Mihalopoulos, Stergios Vratolis, Konstantinos Eleftheriadis, Alfred Wiedensohler, Kay Weinhold, Maik Merkel, Thomas Tuch, and Roy M. Harrison
Atmos. Chem. Phys., 21, 11905–11925, https://doi.org/10.5194/acp-21-11905-2021, https://doi.org/10.5194/acp-21-11905-2021, 2021
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Formation of new particles is a key process in the atmosphere. New particle formation events arising from nucleation of gaseous precursors have been analysed in extensive datasets from 13 sites in five European countries in terms of frequency, nucleation rate, and particle growth rate, with several common features and many differences identified. Although nucleation frequencies are lower at roadside sites, nucleation rates and particle growth rates are typically higher.
Dimitrios Bousiotis, Ajit Singh, Molly Haugen, David C. S. Beddows, Sebastián Diez, Killian L. Murphy, Pete M. Edwards, Adam Boies, Roy M. Harrison, and Francis D. Pope
Atmos. Meas. Tech., 14, 4139–4155, https://doi.org/10.5194/amt-14-4139-2021, https://doi.org/10.5194/amt-14-4139-2021, 2021
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Measurement and source apportionment of atmospheric pollutants are crucial for the assessment of air quality and the implementation of policies for their improvement. This study highlights the current capability of low-cost sensors in source identification and differentiation using clustering approaches. Future directions towards particulate matter source apportionment using low-cost OPCs are highlighted.
Dimitrios Bousiotis, James Brean, Francis D. Pope, Manuel Dall'Osto, Xavier Querol, Andrés Alastuey, Noemi Perez, Tuukka Petäjä, Andreas Massling, Jacob Klenø Nøjgaard, Claus Nordstrøm, Giorgos Kouvarakis, Stergios Vratolis, Konstantinos Eleftheriadis, Jarkko V. Niemi, Harri Portin, Alfred Wiedensohler, Kay Weinhold, Maik Merkel, Thomas Tuch, and Roy M. Harrison
Atmos. Chem. Phys., 21, 3345–3370, https://doi.org/10.5194/acp-21-3345-2021, https://doi.org/10.5194/acp-21-3345-2021, 2021
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New particle formation events from 16 sites over Europe have been studied, and the influence of meteorological and atmospheric composition variables has been investigated. Some variables, like solar radiation intensity and temperature, have a positive effect on the occurrence of these events, while others have a negative effect, affecting different aspects such as the rate at which particles are formed or grow. This effect varies depending on the site type and magnitude of these variables.
Clarissa Baldo, Paola Formenti, Sophie Nowak, Servanne Chevaillier, Mathieu Cazaunau, Edouard Pangui, Claudia Di Biagio, Jean-Francois Doussin, Konstantin Ignatyev, Pavla Dagsson-Waldhauserova, Olafur Arnalds, A. Robert MacKenzie, and Zongbo Shi
Atmos. Chem. Phys., 20, 13521–13539, https://doi.org/10.5194/acp-20-13521-2020, https://doi.org/10.5194/acp-20-13521-2020, 2020
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We showed that Icelandic dust has a fundamentally different chemical and mineralogical composition from low-latitude dust. In particular, magnetite is as high as 1 %–2 % of the total dust mass. Our results suggest that Icelandic dust may have an important impact on the radiation balance in the subpolar and polar regions.
Louisa J. Kramer, Leigh R. Crilley, Thomas J. Adams, Stephen M. Ball, Francis D. Pope, and William J. Bloss
Atmos. Chem. Phys., 20, 5231–5248, https://doi.org/10.5194/acp-20-5231-2020, https://doi.org/10.5194/acp-20-5231-2020, 2020
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HONO is a large source of OH radicals, which can drive VOC oxidation, leading to the formation of ozone and secondary organic aerosols. Here we investigate primary vehicle emissions of HONO from measurements in a road tunnel in Birmingham, UK. A HONO/NOx emission ratio was detemined and compared to previous studies. Results indicate HONO/NOx has not varied much over the last two decades and technologies aimed at reducing NO2 may have also resulted in a reduction in direct HONO vehicle emissions.
Leigh R. Crilley, Ajit Singh, Louisa J. Kramer, Marvin D. Shaw, Mohammed S. Alam, Joshua S. Apte, William J. Bloss, Lea Hildebrandt Ruiz, Pingqing Fu, Weiqi Fu, Shahzad Gani, Michael Gatari, Evgenia Ilyinskaya, Alastair C. Lewis, David Ng'ang'a, Yele Sun, Rachel C. W. Whitty, Siyao Yue, Stuart Young, and Francis D. Pope
Atmos. Meas. Tech., 13, 1181–1193, https://doi.org/10.5194/amt-13-1181-2020, https://doi.org/10.5194/amt-13-1181-2020, 2020
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There is considerable interest in using low-cost optical particle counters (OPCs) for particle mass measurements; however, there is no agreed upon method with respect to calibration. Here we exploit a number of datasets globally to demonstrate that particle composition and relative humidity are the key factors affecting measured concentrations from a low-cost OPC, and we present a simple correction methodology that corrects for this influence.
Dimitrios Bousiotis, Manuel Dall'Osto, David C. S. Beddows, Francis D. Pope, and Roy M. Harrison
Atmos. Chem. Phys., 19, 5679–5694, https://doi.org/10.5194/acp-19-5679-2019, https://doi.org/10.5194/acp-19-5679-2019, 2019
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New particle formation events are identified at three sites in southern England, including a roadside and urban background site within London and a rural regional background site. The conditions favouring new particle formation events are identified and compared between the sites. Although a higher degree of pollution presents a greater condensation sink, it appears to be largely compensated for by faster particle growth rates.
Irina Nikolova, Xiaoming Cai, Mohammed Salim Alam, Soheil Zeraati-Rezaei, Jian Zhong, A. Rob MacKenzie, and Roy M. Harrison
Atmos. Chem. Phys., 18, 17143–17155, https://doi.org/10.5194/acp-18-17143-2018, https://doi.org/10.5194/acp-18-17143-2018, 2018
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There are increasing health concerns about the smallest airborne particles found in polluted urban atmospheres. These particles are composed of a mixture of oil-derived substances, but the exact composition is not known and is likely to be very complicated. We provide a way to compute how these particles change as their chemical make-up changes. We also outline the range of particle compositions that reproduce the behaviour of the smallest particles seen in field measurements.
Francis D. Pope, Michael Gatari, David Ng'ang'a, Alexander Poynter, and Rhiannon Blake
Atmos. Chem. Phys., 18, 15403–15418, https://doi.org/10.5194/acp-18-15403-2018, https://doi.org/10.5194/acp-18-15403-2018, 2018
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Low- and middle-income countries face an increasing threat from poor air quality, stemming from rapid urbanization, population growth, and rises in fuel and motorization use. This paper presents high temporal resolution particulate matter (PM) data, using low-cost sensors, for the exemplar city of Nairobi, Kenya, where PM levels are found to be much greater than WHO recommendations. The study shows that calibrated low-cost sensors can be successfully used to measure PM in cities like Nairobi.
Mohammed S. Alam, Soheil Zeraati-Rezaei, Zhirong Liang, Christopher Stark, Hongming Xu, A. Rob MacKenzie, and Roy M. Harrison
Atmos. Meas. Tech., 11, 3047–3058, https://doi.org/10.5194/amt-11-3047-2018, https://doi.org/10.5194/amt-11-3047-2018, 2018
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Diesel fuel, lubricating oil and diesel exhaust emissions all contain a very complex mixture of chemical compounds with diverse molecular structures. The GC × GC-ToF-MS analytical method is a very powerful way of separating and identifying those compounds. This paper describes the allocation of compounds into groups with similar molecular structures and chemical properties, which facilitates the intercomparison of very complex mixtures such as are found in diesel fuel, oil and emissions.
Leigh R. Crilley, Marvin Shaw, Ryan Pound, Louisa J. Kramer, Robin Price, Stuart Young, Alastair C. Lewis, and Francis D. Pope
Atmos. Meas. Tech., 11, 709–720, https://doi.org/10.5194/amt-11-709-2018, https://doi.org/10.5194/amt-11-709-2018, 2018
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The affordability and small size of low-cost particle sensors make them attractive for air pollution experiments that require multiple instruments, or take place in hard-to-access locations or low-income countries. For any sensor to be useful, its accuracy and precision need to be known. We evaluate the Alphasense OPC-N2 for monitoring airborne particles at typical UK urban background sites. The devices were found to be accurate provided they are correctly calibrated.
Ajit Singh, William J. Bloss, and Francis D. Pope
Atmos. Chem. Phys., 17, 2085–2101, https://doi.org/10.5194/acp-17-2085-2017, https://doi.org/10.5194/acp-17-2085-2017, 2017
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Reduced visibility can indicate poor air quality. Using long-term visibility measurements, we explore the combined
influence of aerosol particle and gas characteristics, and meteorology on long-term visibility. The measured
data were fitted to a newly developed light-extinction model to generate predictions of historic aerosol and
gas scattering and absorbing properties. This approach allows for estimation of historic aerosol properties where measurements are not available.
Suad S. Al-Kindi, Francis D. Pope, David C. Beddows, William J. Bloss, and Roy M. Harrison
Atmos. Chem. Phys., 16, 15561–15579, https://doi.org/10.5194/acp-16-15561-2016, https://doi.org/10.5194/acp-16-15561-2016, 2016
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Oleic acid is a chemical substance which is emitted from cooking processes and is present as tiny particles in the atmosphere. The oleic acid in the particles reacts chemically with atmospheric ozone, causing substantial changes to the composition of the particles. This paper uses new techniques to explore these chemical reactions and the effect of humidity upon them. The significance of the results for the atmosphere is considered.
Mingjin Tang, James Keeble, Paul J. Telford, Francis D. Pope, Peter Braesicke, Paul T. Griffiths, N. Luke Abraham, James McGregor, I. Matt Watson, R. Anthony Cox, John A. Pyle, and Markus Kalberer
Atmos. Chem. Phys., 16, 15397–15412, https://doi.org/10.5194/acp-16-15397-2016, https://doi.org/10.5194/acp-16-15397-2016, 2016
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We have investigated for the first time the heterogeneous hydrolysis of ClONO2 on TiO2 and SiO2 aerosol particles at room temperature and at different relative humidities (RHs), using an aerosol flow tube. The kinetic data reported in our current and previous studies have been included in the UKCA chemistry–climate model to assess the impact of TiO2 injection on stratospheric chemistry and stratospheric ozone in particular.
J. G. Levine, A. R. MacKenzie, O. J. Squire, A. T. Archibald, P. T. Griffiths, N. L. Abraham, J. A. Pyle, D. E. Oram, G. Forster, J. F. Brito, J. D. Lee, J. R. Hopkins, A. C. Lewis, S. J. B. Bauguitte, C. F. Demarco, P. Artaxo, P. Messina, J. Lathière, D. A. Hauglustaine, E. House, C. N. Hewitt, and E. Nemitz
Atmos. Chem. Phys. Discuss., https://doi.org/10.5194/acpd-15-24251-2015, https://doi.org/10.5194/acpd-15-24251-2015, 2015
Revised manuscript has not been submitted
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This study explores our ability to simulate atmospheric chemistry stemming from isoprene emissions—a reactive gas emitted from vegetation—in pristine and polluted regions of the Amazon basin. We explore how two contrasting models fare in reproducing recent airborne measurements in the region. Their differing treatments of transport and mixing are found to: profoundly affect their performance; and yield very different pictures of the exposure of the rainforest to harmful ozone concentrations.
K. P. Wyche, P. S. Monks, K. L. Smallbone, J. F. Hamilton, M. R. Alfarra, A. R. Rickard, G. B. McFiggans, M. E. Jenkin, W. J. Bloss, A. C. Ryan, C. N. Hewitt, and A. R. MacKenzie
Atmos. Chem. Phys., 15, 8077–8100, https://doi.org/10.5194/acp-15-8077-2015, https://doi.org/10.5194/acp-15-8077-2015, 2015
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This paper describes a new ensemble methodology for the statistical analysis of atmospheric gas- & particle-phase composition data sets. The methodology reduces the huge amount of data derived from many chamber experiments to show that organic reactivity & resultant particle formation can be mapped into unique clusters in statistical space. The model generated is used to map more realistic plant mesocosm oxidation data, the projection of which gives insight into reactive pathways & precursors.
A. C. Valach, B. Langford, E. Nemitz, A. R. MacKenzie, and C. N. Hewitt
Atmos. Chem. Phys., 15, 7777–7796, https://doi.org/10.5194/acp-15-7777-2015, https://doi.org/10.5194/acp-15-7777-2015, 2015
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Concentrations and fluxes of selected volatile organic compounds were measured over a 5-month period in central London as part of the ClearfLo project using a proton transfer reaction mass spectrometer. Emission sources within the city were inferred from spatio-temporal patterns and showed a detectable biogenic source during warmer months, which was modelled using the Guenther 95 algorithm. Comparisons were made with the local emissions inventories showing mostly underestimated emissions.
H.-J. Tong, B. Ouyang, N. Nikolovski, D. M. Lienhard, F. D. Pope, and M. Kalberer
Atmos. Meas. Tech., 8, 1183–1195, https://doi.org/10.5194/amt-8-1183-2015, https://doi.org/10.5194/amt-8-1183-2015, 2015
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This paper describes a newly designed cold electrodynamic balance (EDB) which can be used to study the evaporation kinetics and freezing properties of aerosols at temperatures down to -40˚C. The abilities of the new EDB are exemplified through the study of the immersion freezing properties of water droplets containing extracts of water birch pollen (Betula fontinalis occidentalis). Protein-rich pollen extracts are found to be significantly more ice-active than non-proteinaceous extracts.
K. P. Wyche, A. C. Ryan, C. N. Hewitt, M. R. Alfarra, G. McFiggans, T. Carr, P. S. Monks, K. L. Smallbone, G. Capes, J. F. Hamilton, T. A. M. Pugh, and A. R. MacKenzie
Atmos. Chem. Phys., 14, 12781–12801, https://doi.org/10.5194/acp-14-12781-2014, https://doi.org/10.5194/acp-14-12781-2014, 2014
M. J. Tang, P. J. Telford, F. D. Pope, L. Rkiouak, N. L. Abraham, A. T. Archibald, P. Braesicke, J. A. Pyle, J. McGregor, I. M. Watson, R. A. Cox, and M. Kalberer
Atmos. Chem. Phys., 14, 6035–6048, https://doi.org/10.5194/acp-14-6035-2014, https://doi.org/10.5194/acp-14-6035-2014, 2014
M. von Hobe, S. Bekki, S. Borrmann, F. Cairo, F. D'Amato, G. Di Donfrancesco, A. Dörnbrack, A. Ebersoldt, M. Ebert, C. Emde, I. Engel, M. Ern, W. Frey, S. Genco, S. Griessbach, J.-U. Grooß, T. Gulde, G. Günther, E. Hösen, L. Hoffmann, V. Homonnai, C. R. Hoyle, I. S. A. Isaksen, D. R. Jackson, I. M. Jánosi, R. L. Jones, K. Kandler, C. Kalicinsky, A. Keil, S. M. Khaykin, F. Khosrawi, R. Kivi, J. Kuttippurath, J. C. Laube, F. Lefèvre, R. Lehmann, S. Ludmann, B. P. Luo, M. Marchand, J. Meyer, V. Mitev, S. Molleker, R. Müller, H. Oelhaf, F. Olschewski, Y. Orsolini, T. Peter, K. Pfeilsticker, C. Piesch, M. C. Pitts, L. R. Poole, F. D. Pope, F. Ravegnani, M. Rex, M. Riese, T. Röckmann, B. Rognerud, A. Roiger, C. Rolf, M. L. Santee, M. Scheibe, C. Schiller, H. Schlager, M. Siciliani de Cumis, N. Sitnikov, O. A. Søvde, R. Spang, N. Spelten, F. Stordal, O. Sumińska-Ebersoldt, A. Ulanovski, J. Ungermann, S. Viciani, C. M. Volk, M. vom Scheidt, P. von der Gathen, K. Walker, T. Wegner, R. Weigel, S. Weinbruch, G. Wetzel, F. G. Wienhold, I. Wohltmann, W. Woiwode, I. A. K. Young, V. Yushkov, B. Zobrist, and F. Stroh
Atmos. Chem. Phys., 13, 9233–9268, https://doi.org/10.5194/acp-13-9233-2013, https://doi.org/10.5194/acp-13-9233-2013, 2013
A. M. Horseman, T. Richardson, A. T. Boardman, W. Tych, R. Timmis, and A. R. MacKenzie
Atmos. Meas. Tech., 6, 1371–1379, https://doi.org/10.5194/amt-6-1371-2013, https://doi.org/10.5194/amt-6-1371-2013, 2013
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Seed traits and phylogeny explain plants' geographic distribution
Effect of the presence of plateau pikas on the ecosystem services of alpine meadows
Allometric equations and wood density parameters for estimating aboveground and woody debris biomass in Cajander larch (Larix cajanderi) forests of northeast Siberia
Strong influence of trees outside forest in regulating microclimate of intensively modified Afromontane landscapes
Excess radiation exacerbates drought stress impacts on canopy conductance along aridity gradients
Dispersal of bacteria and stimulation of permafrost decomposition by Collembola
Modeling the effects of alternative crop–livestock management scenarios on important ecosystem services for smallholder farming from a landscape perspective
Contrasting strategies of nutrient demand and use between savanna and forest ecosystems in a neotropical transition zone
Susan E. Quick, Giulio Curioni, Nicholas J. Harper, Stefan Krause, and A. Robert MacKenzie
Biogeosciences, 22, 1557–1581, https://doi.org/10.5194/bg-22-1557-2025, https://doi.org/10.5194/bg-22-1557-2025, 2025
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To study the effects of rising CO2 levels on water usage of old-growth temperate oak forest, we monitored trees in an open-air elevated CO2 experiment for 5 years. We found 4 %–16 % leaf-on season reduction in daylight water usage for ~35% increase in atmospheric CO2. July-only reduction varied more widely. Tree water usage depended on tree size, i.e. stem size and projected canopy area, across all treatments. Experimental infrastructure increased the water usage of the trees in leaf-on season.
Jan-Markus Homberger, Sasja van Rosmalen, Michel Riksen, and Juul Limpens
Biogeosciences, 22, 1301–1320, https://doi.org/10.5194/bg-22-1301-2025, https://doi.org/10.5194/bg-22-1301-2025, 2025
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Understanding what determines the establishment of dune-building vegetation could help to better predict coastal dune initiation and development. We monitored the establishment of dune-building grasses and dune initiation in a large field experiment. Our results show that dune initiation takes place during peaks in dune-building grass establishment, which depend on favorable environmental conditions. Our findings can potentially be integrated into beach restoration and management strategies.
Pierre-Alexis Herrault, Albin Ullmann, and Damien Ertlen
Biogeosciences, 22, 705–724, https://doi.org/10.5194/bg-22-705-2025, https://doi.org/10.5194/bg-22-705-2025, 2025
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Mountain grasslands are impacted by climate change and need to adapt. Low-mountain grasslands are poorly understood compared to high-mountain massifs. Thanks to satellite archives, we found that grasslands occurring in the Vosges Mountains (France) exhibited stable productivity or tended to decrease in specific regions of the massif, with a reverse signal observed in high-mountain massifs. We also noted a high responsiveness in their growth strategy to soil moisture, snow regime, and topography.
Lilian Vallet, Charbel Abdallah, Thomas Lauvaux, Lilian Joly, Michel Ramonet, Philippe Ciais, Morgan Lopez, Irène Xueref-Remy, and Florent Mouillot
Biogeosciences, 22, 213–242, https://doi.org/10.5194/bg-22-213-2025, https://doi.org/10.5194/bg-22-213-2025, 2025
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The 2022 fire season had a huge impact on European temperate forest, with several large fires exhibiting prolonged soil combustion reported. We analyzed CO and CO2 concentration recorded at nearby atmospheric towers, revealing intense smoldering combustion. We refined a fire emission model to incorporate this process. We estimated 7.95 Mteq CO2 fire emission, twice the global estimate. Fires contributed to 1.97 % of France's annual carbon footprint, reducing forest carbon sink by 30 % this year.
Arsène Druel, Julien Ruffault, Hendrik Davi, André Chanzy, Olivier Marloie, Miquel De Cáceres, Albert Olioso, Florent Mouillot, Christophe François, Kamel Soudani, and Nicolas K. Martin-StPaul
Biogeosciences, 22, 1–18, https://doi.org/10.5194/bg-22-1-2025, https://doi.org/10.5194/bg-22-1-2025, 2025
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Accurate radiation data are essential for understanding ecosystem functions and dynamics. Traditional large-scale data lack the precision needed for complex terrain. This study introduces a new model, which accounts for sub-daily direct and diffuse radiation effects caused by terrain features, to enhance the radiation data resolution using elevation maps. Tested on a mountainous area, this method significantly improved radiation estimates, benefiting predictions of forest functions.
Gab Abramowitz, Anna Ukkola, Sanaa Hobeichi, Jon Cranko Page, Mathew Lipson, Martin G. De Kauwe, Samuel Green, Claire Brenner, Jonathan Frame, Grey Nearing, Martyn Clark, Martin Best, Peter Anthoni, Gabriele Arduini, Souhail Boussetta, Silvia Caldararu, Kyeungwoo Cho, Matthias Cuntz, David Fairbairn, Craig R. Ferguson, Hyungjun Kim, Yeonjoo Kim, Jürgen Knauer, David Lawrence, Xiangzhong Luo, Sergey Malyshev, Tomoko Nitta, Jerome Ogee, Keith Oleson, Catherine Ottlé, Phillipe Peylin, Patricia de Rosnay, Heather Rumbold, Bob Su, Nicolas Vuichard, Anthony P. Walker, Xiaoni Wang-Faivre, Yunfei Wang, and Yijian Zeng
Biogeosciences, 21, 5517–5538, https://doi.org/10.5194/bg-21-5517-2024, https://doi.org/10.5194/bg-21-5517-2024, 2024
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This paper evaluates land models – computer-based models that simulate ecosystem dynamics; land carbon, water, and energy cycles; and the role of land in the climate system. It uses machine learning and AI approaches to show that, despite the complexity of land models, they do not perform nearly as well as they could given the amount of information they are provided with about the prediction problem.
Mateus Dantas de Paula, Tatiana Reichert, Laynara Lugli, Erica McGale, Kerstin Pierick, João Paulo Darela-Filho, Liam Langan, Jürgen Homeier, Anja Rammig, and Thomas Hickler
EGUsphere, https://doi.org/10.5194/egusphere-2024-3259, https://doi.org/10.5194/egusphere-2024-3259, 2024
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This study explores how plant roots, with different forms and functions, rely on fungal partnerships for nutrient uptake. This relationship was integrated into a vegetation model and was tested in a tropical forest in Ecuador. The model accurately predicted root traits and showed that without fungi, biomass decreased by up to 80 %. The findings highlight the critical role of fungi in ecosystem processes and suggest that root-fungal interactions should be considered in vegetation models.
Eric Gustafson, Dustin Bronson, Marcella Windmuller-Campione, Robert A. Slesak, and Deahn Donner
EGUsphere, https://doi.org/10.5194/egusphere-2024-3332, https://doi.org/10.5194/egusphere-2024-3332, 2024
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Black ash forests provide many ecological and tribal cultural benefits but may soon be killed by invasive insects. Black ash trees maintain forests on very wet sites by removing enough water to allow other species to survive. We combined results from physical experiments and a simulation model to project the ecological outcome of strategies to replace ash with species not killed by the insect. We found that this should work if ways can be found to ensure that planted trees survive to maturity.
Melih Öztürk, Turgay Biricik, and Rıdvan Koruyan
EGUsphere, https://doi.org/10.5194/egusphere-2024-3372, https://doi.org/10.5194/egusphere-2024-3372, 2024
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Oriental plane LAI values have changed with definite pattern compatible with phenological periods. Air-soil temperatures were significantly definitive on course of mean LAI particularly during foliation. However, tree height and DBH were not significantly correlated with point-based maximum LAIs. Point-based mean LAI increased from 0.80 m2 m-2 to 2.76 m2 m-2 during foliation period. Mean tree height and DBH for point-based canopies ranged between 17.0–26.7 m and 26.5–38.2 cm respectively.
Simon Scheiter, Sophie Wolf, and Teja Kattenborn
Biogeosciences, 21, 4909–4926, https://doi.org/10.5194/bg-21-4909-2024, https://doi.org/10.5194/bg-21-4909-2024, 2024
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Biomes are widely used to map vegetation patterns at large spatial scales and to assess impacts of climate change, yet there is no consensus on a generally valid biome classification scheme. We used crowd-sourced species distribution data and trait data to assess whether trait information is suitable for delimiting biomes. Although the trait data were heterogeneous and had large gaps with respect to the spatial distribution, we found that a global trait-based biome classification was possible.
Cheng-Hsien Lin, Colleen Zumpf, Chunhwa Jang, Thomas Voigt, Guanglong Tian, Olawale Oladeji, Albert Cox, Rehnuma Mehzabin, and DoKyoung Lee
Biogeosciences, 21, 4765–4784, https://doi.org/10.5194/bg-21-4765-2024, https://doi.org/10.5194/bg-21-4765-2024, 2024
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Riparian areas are subject to environmental issues (nutrient leaching) associated with low productivity. Perennial grasses can improve ecosystem services from riparian zones while producing forage/bioenergy feedstock biomass as potential income for farmers. The forage-type buffer can be an ideal short-term candidate due to its great efficiency of nutrient scavenging; the bioenergy-type buffer showed better sustainability than the forage buffer and a continuous yield supply potential.
Gabriela Sophia, Silvia Caldararu, Benjamin David Stocker, and Sönke Zaehle
Biogeosciences, 21, 4169–4193, https://doi.org/10.5194/bg-21-4169-2024, https://doi.org/10.5194/bg-21-4169-2024, 2024
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Through an extensive global dataset of leaf nutrient resorption and a multifactorial analysis, we show that the majority of spatial variation in nutrient resorption may be driven by leaf habit and type, with thicker, longer-lived leaves having lower resorption efficiencies. Climate, soil fertility and soil-related factors emerge as strong drivers with an additional effect on its role. These results are essential for comprehending plant nutrient status, plant productivity and nutrient cycling.
Ecio Souza Diniz, Eladio Rodríguez-Penedo, Roger Grau-Andrés, Jordi Vayreda, and Marcos Fernández-Martínez
EGUsphere, https://doi.org/10.5194/egusphere-2024-2572, https://doi.org/10.5194/egusphere-2024-2572, 2024
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In this study, we found that the accumulation of nutrients (e.g., carbon, nitrogen, phosphorus, calcium) in leaves is an important factor in explaining tree growth in forest ecosystems. This result provides evidence for forest growth studies aimed at forest conservation and restoration to better direct their resources to data collection and measurement. Collecting data on nutrient stocks in tree leaves can also provide valuable information to broaden our understanding of forest functioning.
Friedrich J. Bohn, Ana Bastos, Romina Martin, Anja Rammig, Niak Sian Koh, Giles B. Sioen, Bram Buscher, Louise Carver, Fabrice DeClerck, Moritz Drupp, Robert Fletcher, Matthew Forrest, Alexandros Gasparatos, Alex Godoy-Faúndez, Gregor Hagedorn, Martin Hänsel, Jessica Hetzer, Thomas Hickler, Cornelia B. Krug, Stasja Koot, Xiuzhen Li, Amy Luers, Shelby Matevich, H. Damon Matthews, Ina C. Meier, Awaz Mohamed, Sungmin O, David Obura, Ben Orlove, Rene Orth, Laura Pereira, Markus Reichstein, Lerato Thakholi, Peter Verburg, and Yuki Yoshida
EGUsphere, https://doi.org/10.5194/egusphere-2024-2551, https://doi.org/10.5194/egusphere-2024-2551, 2024
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An interdisciplinary collaboration of 35 international researchers from 34 institutions highlighting nine recent findings in biosphere research. Within these themes, they discuss issues arising from climate change and other anthropogenic stressors, and highlight the co-benefits of nature-based solutions and ecosystem services. They discuss recent findings in the context of global trade and international policy frameworks, and highlight lessons for local implementation of nature-based solutions.
Mingjie Shi, Nate McDowell, Huilin Huang, Faria Zahura, Lingcheng Li, and Xingyuan Chen
EGUsphere, https://doi.org/10.22541/au.171053013.30286044/v2, https://doi.org/10.22541/au.171053013.30286044/v2, 2024
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Using Moderate Resolution Imaging Spectroradiometer data products, we quantitatively estimate the resistance and resilience of ecosystem functions to wildfires that occurred in the Columbia River Basin in 2015. Carbon state exhibits lower resistance and resilience than the ecosystem fluxes. The random forest feature importance analysis indicates that burn severity plays a minor role in the resilience of grassland, while it has a relatively major role in the resilience of forest and savanna.
Madeleine-Zoé Corbeil-Robitaille, Éliane Duchesne, Daniel Fortier, Christophe Kinnard, and Joël Bêty
Biogeosciences, 21, 3401–3423, https://doi.org/10.5194/bg-21-3401-2024, https://doi.org/10.5194/bg-21-3401-2024, 2024
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In the Arctic tundra, climate change is transforming the landscape, and this may impact wildlife. We focus on three nesting bird species and the islets they select as refuges from their main predator, the Arctic fox. A geomorphological process, ice-wedge polygon degradation, was found to play a key role in creating these refuges. This process is likely to affect predator–prey dynamics in the Arctic tundra, highlighting the connections between nature's physical and ecological systems.
Samuel M. Fischer, Xugao Wang, and Andreas Huth
Biogeosciences, 21, 3305–3319, https://doi.org/10.5194/bg-21-3305-2024, https://doi.org/10.5194/bg-21-3305-2024, 2024
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Understanding the drivers of forest productivity is key for accurately assessing forests’ role in the global carbon cycle. Yet, despite significant research effort, it is not fully understood how the productivity of a forest can be deduced from its stand structure. We suggest tackling this problem by identifying the share and structure of immature trees within forests and show that this approach could significantly improve estimates of forests’ net productivity and carbon uptake.
Mery Ingrid Guimarães de Alencar, Rafael D. Guariento, Bertrand Guenet, Luciana S. Carneiro, Eduardo L. Voigt, and Adriano Caliman
Biogeosciences, 21, 3165–3182, https://doi.org/10.5194/bg-21-3165-2024, https://doi.org/10.5194/bg-21-3165-2024, 2024
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Flowers are ephemeral organs for reproduction, and their litter is functionally different from leaf litter. Flowers can affect decomposition and interact with leaf litter, influencing decomposition non-additively. We show that mixing flower and leaf litter from the Tabebuia aurea tree creates reciprocal synergistic effects on decomposition in both terrestrial and aquatic environments. We highlight that flower litter input can generate biogeochemical hotspots in terrestrial ecosystems.
Salim Soltani, Olga Ferlian, Nico Eisenhauer, Hannes Feilhauer, and Teja Kattenborn
Biogeosciences, 21, 2909–2935, https://doi.org/10.5194/bg-21-2909-2024, https://doi.org/10.5194/bg-21-2909-2024, 2024
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In this research, we developed a novel method using citizen science data as alternative training data for computer vision models to map plant species in unoccupied aerial vehicle (UAV) images. We use citizen science plant photographs to train models and apply them to UAV images. We tested our approach on UAV images of a test site with 10 different tree species, yielding accurate results. This research shows the potential of citizen science data to advance our ability to monitor plant species.
Courtney G. Reed, Michelle L. Budny, Johan T. du Toit, Ryan Helcoski, Joshua P. Schimel, Izak P. J. Smit, Tercia Strydom, Aimee Tallian, Dave I. Thompson, Helga van Coller, Nathan P. Lemoine, and Deron E. Burkepile
EGUsphere, https://doi.org/10.5194/egusphere-2024-1514, https://doi.org/10.5194/egusphere-2024-1514, 2024
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We seek to understand the ecological legacies of elephants after they die. We sampled elephant carcasses in South Africa and found that they release nutrients into soil, which then enter plants and are available for consumption by other herbivores. This research reveals a key way that these elephants contribute to nutrient cycling on the savanna after death. It also highlights an important process that may be lost on savannas in areas where elephant populations are in decline.
Xue Feng, Ruzhen Wang, Tianpeng Li, Jiangping Cai, Heyong Liu, Hui Li, and Yong Jiang
Biogeosciences, 21, 2641–2653, https://doi.org/10.5194/bg-21-2641-2024, https://doi.org/10.5194/bg-21-2641-2024, 2024
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Plant functional traits have been considered as reflecting adaptations to environmental variations, indirectly affecting ecosystem productivity. How soil acidification affects above- and belowground biomass by altering leaf and root traits remains poorly understood. We found divergent trait responses driven by soil environmental conditions in two dominant species, resulting in a decrease in aboveground biomass and an increase in belowground biomass.
Minhua Zhang, Xiaoqing Hu, and Fangliang He
Biogeosciences, 21, 2133–2142, https://doi.org/10.5194/bg-21-2133-2024, https://doi.org/10.5194/bg-21-2133-2024, 2024
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Plant sexual systems are important to understanding the evolution and maintenance of plant diversity. We quantified region effects on their proportions while incorporating local climate factors and evolutionary history. We found regional processes and climate effects both play important roles in shaping the geographic distribution of sexual systems, providing a baseline for predicting future changes in forest communities in the context of global change.
Christian H. Mohr, Michael Dietze, Violeta Tolorza, Erwin Gonzalez, Benjamin Sotomayor, Andres Iroume, Sten Gilfert, and Frieder Tautz
Biogeosciences, 21, 1583–1599, https://doi.org/10.5194/bg-21-1583-2024, https://doi.org/10.5194/bg-21-1583-2024, 2024
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Coastal temperate rainforests, among Earth’s carbon richest biomes, are systematically underrepresented in the global network of critical zone observatories (CZOs). Introducing here a first CZO in the heart of the Patagonian rainforest, Chile, we investigate carbon sink functioning, biota-driven landscape evolution, fluxes of matter and energy, and disturbance regimes. We invite the community to join us in cross-disciplinary collaboration to advance science in this particular environment.
Jorge F. Perez-Quezada, David Trejo, Javier Lopatin, David Aguilera, Bruce Osborne, Mauricio Galleguillos, Luca Zattera, Juan L. Celis-Diez, and Juan J. Armesto
Biogeosciences, 21, 1371–1389, https://doi.org/10.5194/bg-21-1371-2024, https://doi.org/10.5194/bg-21-1371-2024, 2024
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For 8 years we sampled a temperate rainforest and a peatland in Chile to estimate their efficiency to capture carbon per unit of water lost. The efficiency is more related to the water lost than to the carbon captured and is mainly driven by evaporation instead of transpiration. This is the first report from southern South America and highlights that ecosystems might behave differently in this area, likely explained by the high annual precipitation (~ 2100 mm) and light-limited conditions.
Fredrik Lagergren, Robert G. Björk, Camilla Andersson, Danijel Belušić, Mats P. Björkman, Erik Kjellström, Petter Lind, David Lindstedt, Tinja Olenius, Håkan Pleijel, Gunhild Rosqvist, and Paul A. Miller
Biogeosciences, 21, 1093–1116, https://doi.org/10.5194/bg-21-1093-2024, https://doi.org/10.5194/bg-21-1093-2024, 2024
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The Fennoscandian boreal and mountain regions harbour a wide range of ecosystems sensitive to climate change. A new, highly resolved high-emission climate scenario enabled modelling of the vegetation development in this region at high resolution for the 21st century. The results show dramatic south to north and low- to high-altitude shifts of vegetation zones, especially for the open tundra environments, which will have large implications for nature conservation, reindeer husbandry and forestry.
Florian Zellweger, Eric Sulmoni, Johanna T. Malle, Andri Baltensweiler, Tobias Jonas, Niklaus E. Zimmermann, Christian Ginzler, Dirk Nikolaus Karger, Pieter De Frenne, David Frey, and Clare Webster
Biogeosciences, 21, 605–623, https://doi.org/10.5194/bg-21-605-2024, https://doi.org/10.5194/bg-21-605-2024, 2024
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The microclimatic conditions experienced by organisms living close to the ground are not well represented in currently used climate datasets derived from weather stations. Therefore, we measured and mapped ground microclimate temperatures at 10 m spatial resolution across Switzerland using a novel radiation model. Our results reveal a high variability in microclimates across different habitats and will help to better understand climate and land use impacts on biodiversity and ecosystems.
Andrew Kulmatiski, Martin C. Holdrege, Cristina Chirvasă, and Karen H. Beard
Biogeosciences, 21, 131–143, https://doi.org/10.5194/bg-21-131-2024, https://doi.org/10.5194/bg-21-131-2024, 2024
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Warmer air and larger precipitation events are changing the way water moves through the soil and into plants. Here we show that detailed descriptions of root distributions can predict plant growth responses to changing precipitation patterns. Shrubs and forbs increased growth, while grasses showed no response to increased precipitation intensity, and these responses were predicted by plant rooting distributions.
Bonaventure Ntirugulirwa, Etienne Zibera, Nkuba Epaphrodite, Aloysie Manishimwe, Donat Nsabimana, Johan Uddling, and Göran Wallin
Biogeosciences, 20, 5125–5149, https://doi.org/10.5194/bg-20-5125-2023, https://doi.org/10.5194/bg-20-5125-2023, 2023
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Twenty tropical tree species native to Africa were planted along an elevation gradient (1100 m, 5.4 °C difference). We found that early-successional (ES) species, especially from lower elevations, grew faster at warmer sites, while several of the late-successional (LS) species, especially from higher elevations, did not respond or grew slower. Moreover, a warmer climate increased tree mortality in LS species, but not much in ES species.
Philippe Choler
Biogeosciences, 20, 4259–4272, https://doi.org/10.5194/bg-20-4259-2023, https://doi.org/10.5194/bg-20-4259-2023, 2023
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The year 2022 was unique in that the summer heat wave and drought led to a widespread reduction in vegetation growth at high elevation in the European Alps. This impact was unprecedented in the southwestern, warm, and dry part of the Alps. Over the last 2 decades, water has become a co-dominant control of vegetation activity in areas that were, so far, primarily controlled by temperature, and the growth of mountain grasslands has become increasingly sensitive to moisture availability.
Adriana Simonetti, Raquel Fernandes Araujo, Carlos Henrique Souza Celes, Flávia Ranara da Silva e Silva, Joaquim dos Santos, Niro Higuchi, Susan Trumbore, and Daniel Magnabosco Marra
Biogeosciences, 20, 3651–3666, https://doi.org/10.5194/bg-20-3651-2023, https://doi.org/10.5194/bg-20-3651-2023, 2023
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We combined 2 years of monthly drone-acquired RGB (red–green–blue) imagery with field surveys in a central Amazon forest. Our results indicate that small gaps associated with branch fall were the most frequent. Biomass losses were partially controlled by gap area, with branch fall and snapping contributing the least and greatest relative values, respectively. Our study highlights the potential of drone images for monitoring canopy dynamics in dense tropical forests.
Silvia Caldararu, Victor Rolo, Benjamin D. Stocker, Teresa E. Gimeno, and Richard Nair
Biogeosciences, 20, 3637–3649, https://doi.org/10.5194/bg-20-3637-2023, https://doi.org/10.5194/bg-20-3637-2023, 2023
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Ecosystem manipulative experiments are large experiments in real ecosystems. They include processes such as species interactions and weather that would be omitted in more controlled settings. They offer a high level of realism but are underused in combination with vegetation models used to predict the response of ecosystems to global change. We propose a workflow using models and ecosystem experiments together, taking advantage of the benefits of both tools for Earth system understanding.
Katharina Ramskogler, Bettina Knoflach, Bernhard Elsner, Brigitta Erschbamer, Florian Haas, Tobias Heckmann, Florentin Hofmeister, Livia Piermattei, Camillo Ressl, Svenja Trautmann, Michael H. Wimmer, Clemens Geitner, Johann Stötter, and Erich Tasser
Biogeosciences, 20, 2919–2939, https://doi.org/10.5194/bg-20-2919-2023, https://doi.org/10.5194/bg-20-2919-2023, 2023
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Primary succession in proglacial areas depends on complex driving forces. To concretise the complex effects and interaction processes, 39 known explanatory variables assigned to seven spheres were analysed via principal component analysis and generalised additive models. Key results show that in addition to time- and elevation-dependent factors, also disturbances alter vegetation development. The results are useful for debates on vegetation development in a warming climate.
Zijing Li, Zhiyong Li, Xuze Tong, Lei Dong, Ying Zheng, Jinghui Zhang, Bailing Miao, Lixin Wang, Liqing Zhao, Lu Wen, Guodong Han, Frank Yonghong Li, and Cunzhu Liang
Biogeosciences, 20, 2869–2882, https://doi.org/10.5194/bg-20-2869-2023, https://doi.org/10.5194/bg-20-2869-2023, 2023
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We used random forest models and structural equation models to assess the relative importance of the present climate and paleoclimate as determinants of diversity and aboveground biomass. Results showed that paleoclimate changes and modern climate jointly determined contemporary biodiversity patterns, while community biomass was mainly affected by modern climate. These findings suggest that contemporary biodiversity patterns may be affected by processes at divergent temporal scales.
William Rupert Moore Flynn, Harry Jon Foord Owen, Stuart William David Grieve, and Emily Rebecca Lines
Biogeosciences, 20, 2769–2784, https://doi.org/10.5194/bg-20-2769-2023, https://doi.org/10.5194/bg-20-2769-2023, 2023
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Quantifying vegetation indices is crucial for ecosystem monitoring and modelling. Terrestrial laser scanning (TLS) has potential to accurately measure vegetation indices, but multiple methods exist, with little consensus on best practice. We compare three methods and extract wood-to-plant ratio, a metric used to correct for wood in leaf indices. We show corrective metrics vary with tree structure and variation among methods, highlighting the value of TLS data and importance of rigorous testing.
Haiyang Shi, Geping Luo, Olaf Hellwich, Alishir Kurban, Philippe De Maeyer, and Tim Van de Voorde
Biogeosciences, 20, 2727–2741, https://doi.org/10.5194/bg-20-2727-2023, https://doi.org/10.5194/bg-20-2727-2023, 2023
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In studies on the relationship between ecosystem functions and climate and plant traits, previously used data-driven methods such as multiple regression and random forest may be inadequate for representing causality due to limitations such as covariance between variables. Based on FLUXNET site data, we used a causal graphical model to revisit the control of climate and vegetation traits over ecosystem functions.
Josué Delgado-Balbuena, Henry W. Loescher, Carlos A. Aguirre-Gutiérrez, Teresa Alfaro-Reyna, Luis F. Pineda-Martínez, Rodrigo Vargas, and Tulio Arredondo
Biogeosciences, 20, 2369–2385, https://doi.org/10.5194/bg-20-2369-2023, https://doi.org/10.5194/bg-20-2369-2023, 2023
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In the semiarid grassland, an increase in soil moisture at shallow depths instantly enhances carbon release through respiration. In contrast, deeper soil water controls plant carbon uptake but with a delay of several days. Previous soil conditions, biological activity, and the size and timing of precipitation are factors that determine the amount of carbon released into the atmosphere. Thus, future changes in precipitation patterns could convert ecosystems from carbon sinks to carbon sources.
German Vargas Gutiérrez, Daniel Pérez-Aviles, Nanette Raczka, Damaris Pereira-Arias, Julián Tijerín-Triviño, L. David Pereira-Arias, David Medvigy, Bonnie G. Waring, Ember Morrisey, Edward Brzostek, and Jennifer S. Powers
Biogeosciences, 20, 2143–2160, https://doi.org/10.5194/bg-20-2143-2023, https://doi.org/10.5194/bg-20-2143-2023, 2023
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To study whether nutrient availability controls tropical dry forest responses to reductions in soil moisture, we established the first troughfall exclusion experiment in a tropical dry forest plantation system crossed with a fertilization scheme. We found that the effects of fertilization on net primary productivity are larger than the effects of a ~15 % reduction in soil moisture, although in many cases we observed an interaction between drought and nutrient additions, suggesting colimitation.
Alina Lucia Ludat and Simon Kübler
Biogeosciences, 20, 1991–2012, https://doi.org/10.5194/bg-20-1991-2023, https://doi.org/10.5194/bg-20-1991-2023, 2023
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Satellite-based analysis illustrates the impact of geological processes for the stability of the ecosystem in the Mara River basin (Kenya/Tanzania). Newly detected fault activity influences the course of river networks and modifies erosion–deposition patterns. Tectonic surface features and variations in rock chemistry lead to localized enhancement of clay and soil moisture values and seasonally stabilised vegetation growth patterns in this climatically vulnerable region.
Erica Jaakkola, Antje Gärtner, Anna Maria Jönsson, Karl Ljung, Per-Ola Olsson, and Thomas Holst
Biogeosciences, 20, 803–826, https://doi.org/10.5194/bg-20-803-2023, https://doi.org/10.5194/bg-20-803-2023, 2023
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Increased spruce bark beetle outbreaks were recently seen in Sweden. When Norway spruce trees are attacked, they increase their production of VOCs, attempting to kill the beetles. We provide new insights into how the Norway spruce act when infested and found the emitted volatiles to increase up to 700 times and saw a change in compound blend. We estimate that the 2020 bark beetle outbreak in Sweden could have increased the total monoterpene emissions from the forest by more than 10 %.
Georg Wohlfahrt, Albin Hammerle, Felix M. Spielmann, Florian Kitz, and Chuixiang Yi
Biogeosciences, 20, 589–596, https://doi.org/10.5194/bg-20-589-2023, https://doi.org/10.5194/bg-20-589-2023, 2023
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The trace gas carbonyl sulfide (COS), which is taken up by plant leaves in a process very similar to photosynthesis, is thought to be a promising proxy for the gross uptake of carbon dioxide by plants. Here we propose a new framework for estimating a key metric to that end, the so-called leaf relative uptake rate. The values we deduce by applying principles of plant optimality are considerably lower than published values and may help reduce the uncertainty of the global COS budget.
François Jonard, Andrew F. Feldman, Daniel J. Short Gianotti, and Dara Entekhabi
Biogeosciences, 19, 5575–5590, https://doi.org/10.5194/bg-19-5575-2022, https://doi.org/10.5194/bg-19-5575-2022, 2022
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We investigate the spatial and temporal patterns of light and water limitation in plant function at the ecosystem scale. Using satellite observations, we characterize the nonlinear relationships between sun-induced chlorophyll fluorescence (SIF) and water and light availability. This study highlights that soil moisture limitations on SIF are found primarily in drier environments, while light limitations are found in intermediately wet regions.
Nikolai Knapp, Sabine Attinger, and Andreas Huth
Biogeosciences, 19, 4929–4944, https://doi.org/10.5194/bg-19-4929-2022, https://doi.org/10.5194/bg-19-4929-2022, 2022
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The biomass of forests is determined by forest growth and mortality. These quantities can be estimated with different methods such as inventories, remote sensing and modeling. These methods are usually being applied at different spatial scales. The scales influence the obtained frequency distributions of biomass, growth and mortality. This study suggests how to transfer between scales, when using forest models of different complexity for a tropical forest.
Kai Chen, Kevin S. Burgess, Fangliang He, Xiang-Yun Yang, Lian-Ming Gao, and De-Zhu Li
Biogeosciences, 19, 4801–4810, https://doi.org/10.5194/bg-19-4801-2022, https://doi.org/10.5194/bg-19-4801-2022, 2022
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Why does plants' distributional range size vary enormously? This study provides evidence that seed mass, intraspecific seed mass variation, seed dispersal mode and phylogeny contribute to explaining species distribution variation on a geographic scale. Our study clearly shows the importance of including seed life-history traits in modeling and predicting the impact of climate change on species distribution of seed plants.
Ying Ying Chen, Huan Yang, Gen Sheng Bao, Xiao Pan Pang, and Zheng Gang Guo
Biogeosciences, 19, 4521–4532, https://doi.org/10.5194/bg-19-4521-2022, https://doi.org/10.5194/bg-19-4521-2022, 2022
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Investigating the effect of the presence of plateau pikas on ecosystem services of alpine meadows is helpful to understand the role of the presence of small mammalian herbivores in grasslands. The results of this study showed that the presence of plateau pikas led to higher biodiversity conservation, soil nitrogen and phosphorus maintenance, and carbon sequestration of alpine meadows, whereas it led to lower forage available to livestock and water conservation of alpine meadows.
Clement Jean Frédéric Delcourt and Sander Veraverbeke
Biogeosciences, 19, 4499–4520, https://doi.org/10.5194/bg-19-4499-2022, https://doi.org/10.5194/bg-19-4499-2022, 2022
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This study provides new equations that can be used to estimate aboveground tree biomass in larch-dominated forests of northeast Siberia. Applying these equations to 53 forest stands in the Republic of Sakha (Russia) resulted in significantly larger biomass stocks than when using existing equations. The data presented in this work can help refine biomass estimates in Siberian boreal forests. This is essential to assess changes in boreal vegetation and carbon dynamics.
Iris Johanna Aalto, Eduardo Eiji Maeda, Janne Heiskanen, Eljas Kullervo Aalto, and Petri Kauko Emil Pellikka
Biogeosciences, 19, 4227–4247, https://doi.org/10.5194/bg-19-4227-2022, https://doi.org/10.5194/bg-19-4227-2022, 2022
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Tree canopies are strong moderators of understory climatic conditions. In tropical areas, trees cool down the microclimates. Using remote sensing and field measurements we show how even intermediate canopy cover and agroforestry trees contributed to buffering the hottest temperatures in Kenya. The cooling effect was the greatest during hot days and in lowland areas, where the ambient temperatures were high. Adopting agroforestry practices in the area could assist in mitigating climate change.
Jing Wang and Xuefa Wen
Biogeosciences, 19, 4197–4208, https://doi.org/10.5194/bg-19-4197-2022, https://doi.org/10.5194/bg-19-4197-2022, 2022
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Excess radiation and low temperatures exacerbate drought impacts on canopy conductance (Gs) among transects. The primary determinant of drought stress on Gs was soil moisture on the Loess Plateau (LP) and the Mongolian Plateau (MP), whereas it was the vapor pressure deficit on the Tibetan Plateau (TP). Radiation exhibited a negative effect on Gs via drought stress within transects, while temperature had negative effects on stomatal conductance on the TP but no effect on the LP and MP.
Sylvain Monteux, Janine Mariën, and Eveline J. Krab
Biogeosciences, 19, 4089–4105, https://doi.org/10.5194/bg-19-4089-2022, https://doi.org/10.5194/bg-19-4089-2022, 2022
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Quantifying the feedback from the decomposition of thawing permafrost soils is crucial to establish adequate climate warming mitigation scenarios. Past efforts have focused on abiotic and to some extent microbial drivers of decomposition but not biotic drivers such as soil fauna. We added soil fauna (Collembola Folsomia candida) to permafrost, which introduced bacterial taxa without affecting bacterial communities as a whole but increased CO2 production (+12 %), presumably due to priming.
Mirjam Pfeiffer, Munir P. Hoffmann, Simon Scheiter, William Nelson, Johannes Isselstein, Kingsley Ayisi, Jude J. Odhiambo, and Reimund Rötter
Biogeosciences, 19, 3935–3958, https://doi.org/10.5194/bg-19-3935-2022, https://doi.org/10.5194/bg-19-3935-2022, 2022
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Smallholder farmers face challenges due to poor land management and climate change. We linked the APSIM crop model and the aDGVM2 vegetation model to investigate integrated management options that enhance ecosystem functions and services. Sustainable intensification moderately increased yields. Crop residue grazing reduced feed gaps but not for dry-to-wet season transitions. Measures to improve soil water and nutrient status are recommended. Landscape-level ecosystem management is essential.
Marina Corrêa Scalon, Imma Oliveras Menor, Renata Freitag, Karine S. Peixoto, Sami W. Rifai, Beatriz Schwantes Marimon, Ben Hur Marimon Junior, and Yadvinder Malhi
Biogeosciences, 19, 3649–3661, https://doi.org/10.5194/bg-19-3649-2022, https://doi.org/10.5194/bg-19-3649-2022, 2022
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We investigated dynamic nutrient flow and demand in a typical savanna and a transition forest to understand how similar soils and the same climate dominated by savanna vegetation can also support forest-like formations. Savanna relied on nutrient resorption from wood, and nutrient demand was equally partitioned between leaves, wood and fine roots. Transition forest relied on resorption from the canopy biomass and nutrient demand was predominantly driven by leaves.
Cited articles
https://www.worcester.ac.uk/about/academic-schools/school-of-science-and-the-environment/science-and-the-environment-research/national-pollen-and-aerobiology-research-unit/pollen-calendar.aspx,
last access: 16 July 2020.
Amiro, B. D.: Comparison of turbulence statistics within three boreal forest
canopies, Bound.-Lay. Meteorol., 51, 99–121, https://doi.org/10.1007/BF00120463, 1990.
Andrew, C. and Lilleskov, E. A.: Productivity and community structure of
ectomycorrhizal fungal sporocarps under increased atmospheric CO2 and O3, Ecol. Lett.,
12, 813–822, https://doi.org/10.1111/j.1461-0248.2009.01334.x, 2009.
Aylor, D. E.: Dispersal in Time and Space: Aerial Pathogens, in: Plant
Disease: An Advanced Treatise, edited by: Horsfall, J. G. and Cowling, E.
B., Academic Press, New York, 159–179,
https://doi.org/10.1016/0048-3575(79)90101-9, 1978.
Baird, A. B. and Pope, F. D.: “Can't see the forest for the trees”: The
importance of fungi in the context of UK tree planting, https://doi.org/10.1002/fes3.371, 2021.
Baird, A. B., Pope, F. D., Bannister, E. J., and MacKenzie, A. R.: BIFoR FACE 2018 bioaerosols data, University of Birmingham [data set], https://doi.org/10.25500/edata.bham.00000688, 2021.
Bannister, E. J., MacKenzie, A. R., and Cai, X. M.: Realistic Forests and the Modeling of Forest‐Atmosphere Exchange, Rev. Geophys., 60, e2021RG000746, https://doi.org/10.1029/2021RG000746, 2022.
Baldocchi, D. D. and Meyers, T. P.: Turbulence structure in a deciduous
forest, Bound.-Lay. Meteorol., 43, 345–364, 1988.
Bannister, E. J., MacKenzie, A. R., and Cai, X. M.: Realistic Forests and the Modeling of Forest‐Atmosphere Exchange, Rev. Geophys., 60, e2021RG000746, https://doi.org/10.1029/2021RG000746, 2022.
Belcher, S. E., Harman, I. N., and Finnigan, J. J.: The Wind in the Willows:
Flows in Forest Canopies in Complex Terrain, Annu. Rev. Fluid Mech., 44, 479–504,
https://doi.org/10.1146/annurev-fluid-120710-101036, 2012.
Benedetti, A., Morcrette, J.-J., Boucher, O., Dethof, A., Engelen, R. J.,
Fisher, M., Flentje, H., Huneeus, N., Jones, L., Kaiser, J. W., Kinne, S.,
Mangold, A., Razinger, M., Simmons, A. J., and Suttie, M.: Aerosol analysis
and forecast in the European Centre for Medium-Range Weather Forecasts
Integrated Forecast System: 2. Data assimilation, J. Geophys. Res.-Atmos., 114, D13205,
https://doi.org/10.1029/2008JD011115, 2009.
Biedermann, P. H. W. and Vega, F. E.: Ecology and Evolution of
Insect–Fungus Mutualisms, Annu. Rev. Entomol., 65, 431–455,
https://doi.org/10.1146/annurev-ento-011019-024910, 2020.
Burge, H. A.: An update on pollen and fungal spore aerobiology, Reviews And Feature Articles: Current Reviews Of Allergy And Clinical Immunology, 110,
544–552, https://doi.org/10.1067/mai.2002.128674, 2002.
Carslaw, D. C. and Ropkins, K.: openair – an R package for air quality
data analysis, Environ. Modell. Softw., 27–28, 52–61, 2012.
Chaudhary, V. B., Nolimal, S., Sosa-Hernández, M. A., Egan, C., and
Kastens, J.: Trait-based aerial dispersal of arbuscular mycorrhizal fungi,
New Phytol., 228, 238–252, https://doi.org/10.1111/nph.16667, 2020.
Cionco, R. M.: A Mathematical Model for Air Flow in a Vegetative Canopy, J. Appl. Meteorol. Clim., 4, 517–522,
https://doi.org/10.1175/1520-0450(1965)004<0517:ammfaf>2.0.co;2, 1965.
Cionco, R. M.: Analysis of canopy index values for various canopy densities,
Bound.-Lay. Meteorol., 15, 81–93, https://doi.org/10.1007/BF00165507, 1978.
Crilley, L. R., Shaw, M., Pound, R., Kramer, L. J., Price, R., Young, S., Lewis, A. C., and Pope, F. D.: Evaluation of a low-cost optical particle counter (Alphasense OPC-N2) for ambient air monitoring, Atmos. Meas. Tech., 11, 709–720, https://doi.org/10.5194/amt-11-709-2018, 2018.
Crilley, L. R., Singh, A., Kramer, L. J., Shaw, M. D., Alam, M. S., Apte, J. S., Bloss, W. J., Hildebrandt Ruiz, L., Fu, P., Fu, W., Gani, S., Gatari, M., Ilyinskaya, E., Lewis, A. C., Ng'ang'a, D., Sun, Y., Whitty, R. C. W., Yue, S., Young, S., and Pope, F. D.: Effect of aerosol composition on the performance of low-cost optical particle counter correction factors, Atmos. Meas. Tech., 13, 1181–1193, https://doi.org/10.5194/amt-13-1181-2020, 2020.
Davies, R. R., Denny, M. J., and Newton, L. M.: A Comparison Hetween the
Summer and Autumn Air-Sporas at London and Liverpool, Allergy, 18, 131–147,
https://doi.org/10.1111/j.1398-9995.1963.tb03156.x, 1963.
Di-Giovanni, F., Kevan, P. G., and Nasr, M. E.: The variability in settling
velocities of some pollen and spores, Grana, 34, 39–44,
https://doi.org/10.1080/00173139509429031, 1995.
Dressaire, E., Yamada, L., Song, B., and Roper, M.: Mushrooms use
convectively created airflows to disperse their spores, P. Natl. Acad. Sci. USA, 113, 2833–2838, https://doi.org/10.1073/pnas.1509612113, 2016.
Finnigan, J.: Turbulence in Plant Canopies, Annu. Rev., 32, 519–571, 2000.
Fröhlich-Nowoisky, J., Pickersgill, D. A., Despres, V. R., and Pöschl,
U.: High diversity of fungi in air particulate matter, P.
Natl. Acad. Sci. USA, 106, 12814–12819,
https://doi.org/10.1073/pnas.0811003106, 2009.
Fröhlich-Nowoisky, J., Kampf, C. J., Weber, B., Huffman, J. A.,
Pöhlker, C., Andreae, M. O., Lang-Yona, N., Burrows, S. M., Gunthe, S.
S., Elbert, W., Su, H., Hoor, P., Thines, E., Hoffmann, T., Després, V.
R., and Pöschl, U.: Bioaerosols in the Earth system: Climate, health,
and ecosystem interactions, Atmos. Res., 182, 346–376,
https://doi.org/10.1016/j.atmosres.2016.07.018, 2016.
Gange, A. C., Gange, E. G., Sparks, T. H., and Boddy, L.: Rapid and Recent
Changes in Fungal Fruiting Patterns, Science, 316, 71–71,
https://doi.org/10.1126/science.1137489, 2007.
Gardner, A., Ellsworth, D. S., Crous, K. Y., Pritchard, J., and MacKenzie, A. R.: Is
photosynthetic enhancement sustained through three years of elevated CO2 exposure in 175-year-old Quercus robur?, Tree Physiol., 42, 130–144, https://doi.org/10.1093/treephys/tpab090, 2022.
Gilbert, G. S. and Reynolds, D. R.: Nocturnal Fungi: Airborne Spores in the
Canopy and Understory of a Tropical Rain Forest, Biotropica, 37, 462–464, 2005.
Gosselin, M. I., Rathnayake, C. M., Crawford, I., Pöhlker, C., Fröhlich-Nowoisky, J., Schmer, B., Després, V. R., Engling, G., Gallagher, M., Stone, E., Pöschl, U., and Huffman, J. A.: Fluorescent bioaerosol particle, molecular tracer, and fungal spore concentrations during dry and rainy periods in a semi-arid forest, Atmos. Chem. Phys., 16, 15165–15184, https://doi.org/10.5194/acp-16-15165-2016, 2016.
Griffiths, P. T., Borlace, J.-S., Gallimore, P. J., Kalberer, M., Herzog,
M., and Pope, F. D.: Hygroscopic growth and cloud activation of pollen: a
laboratory and modelling study, Atmos. Sci. Lett., 13, 289–295,
https://doi.org/10.1002/asl.397, 2012.
Grinn-Gofroń, A., Nowosad, J., Bosiacka, B., Camacho, I., Pashley, C.,
Belmonte, J., De Linares, C., Ianovici, N., Manzano, J. M. M., Sadyś,
M., Skjøth, C., Rodinkova, V., Tormo-Molina, R., Vokou, D.,
Fernández-Rodríguez, S., and Damialis, A.: Airborne Alternaria and
Cladosporium fungal spores in Europe: Forecasting possibilities and
relationships with meteorological parameters, Sci. Total
Environ., 653, 938–946, https://doi.org/10.1016/j.scitotenv.2018.10.419,
2019.
Grundström, M., Adams-Groom, B., Pashley, C. H., Dahl, Å.,
Rasmussen, K., de Weger, L. A., Thibaudon, M., Fernández-Rodríguez,
S., Silva-Palacios, I., and Skjøth, C. A.: Oak pollen seasonality and
severity across Europe and modelling the season start using a generalized
phenological model, Sci. Total Environ., 663, 527–536,
https://doi.org/10.1016/j.scitotenv.2019.01.212, 2019.
Hagan, D. H. and the py-opc contributors: py-opc,
GitHub [code], https://github.com/dhhagan/py-opc (last access: 27 January 2021), 2017.
Halbwachs, H. and Bässler, C.: Gone with the wind – a review on
basidiospores of lamellate agarics, Mycosphere, 6, 78–112,
https://doi.org/10.5943/mycosphere/6/1/10, 2015.
Hart, K. M., Curioni, G., Blaen, P., Harper, N. J., Miles, P., Lewin, K. F.,
Nagy, J., Bannister, E. J., Cai, X. M., Thomas, R. M., Krause, S., Tausz,
M., and MacKenzie, A. R.: Characteristics of Free Air Carbon Dioxide
Enrichment of a Northern Temperate Mature Forest, Glob. Change Biol., 26, 1023–1037,
https://doi.org/10.1111/gcb.14786, 2019.
Heald, C. L. and Spracklen, D. V.: Atmospheric budget of primary biological
aerosol particles from fungal spores, Geophys. Res. Lett., 36, L09806,
https://doi.org/10.1029/2009GL037493, 2009.
Healy, D. A., O'Connor, D. J., and Sodeau, J. R.: Measurement of the
particle counting efficiency of the “Waveband Integrated Bioaerosol
Sensor” model number 4 (WIBS-4), J. Aerosol Sci., 47, 94–99,
https://doi.org/10.1016/j.jaerosci.2012.01.003, 2012.
Hollins, P. D., Kettlewell, P. S., Atkinson, M. D., Stephenson, D. B.,
Corden, J. M., Millington, W. M., and Mullins, J.: Relationships between
airborne fungal spore concentration of Cladosporium and the summer climate
at two sites in Britain, Int. J. Biometeorol., 48, 137–141,
https://doi.org/10.1007/s00484-003-0188-9, 2004.
Horton, T. R.: Spore Dispersal in Ectomycorrhizal Fungi at Fine and Regional
Scales, in: Biogeography of Mycorrhizal Symbiosis, edited by: Tedersoo, L.,
Springer International Publishing, Cham, 61–78,
https://doi.org/10.1007/978-3-319-56363-3_3, 2017.
Hulst, H. C. and van de Hulst, H. C.: Light scattering by small particles, John Wiley and
Sons, New York, 1957.
Inness, A., Ades, M., Agustí-Panareda, A., Barré, J., Benedictow, A., Blechschmidt, A.-M., Dominguez, J. J., Engelen, R., Eskes, H., Flemming, J., Huijnen, V., Jones, L., Kipling, Z., Massart, S., Parrington, M., Peuch, V.-H., Razinger, M., Remy, S., Schulz, M., and Suttie, M.: The CAMS reanalysis of atmospheric composition, Atmos. Chem. Phys., 19, 3515–3556, https://doi.org/10.5194/acp-19-3515-2019, 2019.
Jones, A. M. and Harrison, R. M.: The effects of meteorological factors on
atmospheric bioaerosol concentrations – a review, Sci. Total
Environ., 326, 151–180, https://doi.org/10.1016/j.scitotenv.2003.11.021,
2004.
Kaimal, J. C. and Finnigan, J. J.: Atmospheric boundary layer flows – their
structure and measurement, Oxford University Press, New York,
https://doi.org/10.16085/j.issn.1000-6613.2012.02.016, 1994.
Kauserud, H., Heegaard, E., Buntgen, U., Halvorsen, R., Egli, S.,
Senn-Irlet, B., Krisai-Greilhuber, I., Damon, W., Sparks, T., Norden, J.,
Hoiland, K., Kirk, P., Semenov, M., Boddy, L., and Stenseth, N. C.:
Warming-induced shift in European mushroom fruiting phenology, P. Natl. Acad. Sci. USA, 109, 14488–14493,
https://doi.org/10.1073/pnas.1200789109, 2012.
Kivlin, S. N., Winston, G. C., Goulden, M. L., and Treseder, K. K.:
Environmental filtering affects soil fungal community composition more than
dispersal limitation at regional scales, Fungal Ecol., 12, 14–25,
https://doi.org/10.1016/j.funeco.2014.04.004, 2014.
Klironomos, J. N., Rillig, M. C., Allen, M. F., Zak, D. R., Pregitzer, K.
S., and Kubiske, M. E.: Increased levels of airborne fungal spores in
response to Populus tremuloides grown under elevated atmospheric CO2, Can. J. Bot., 75,
1670–1673, https://doi.org/10.1139/b97-880, 1997.
Læssøe, T. and Petersen, J. H.: Fungi of Temperate Europe, Princeton
University Press, 2019.
Li, D.-W. and Kendrick, B.: A year-round study on functional relationships
of airborne fungi with meteorological factors, Int. J. Biometeorol., 39,
74–80, https://doi.org/10.1007/BF01212584, 1995.
Lilleskov, E. A. and Bruns, T. D.: Spore dispersal of a resupinate
ectomycorrhizal fungus, Tomentella sublilacina, via soil food webs, Mycologia, 97,
762–769, https://doi.org/10.1080/15572536.2006.11832767, 2005.
MacKenzie, A. R., Krause, S., Hart, K. M., Thomas, R. M., Blaen, P. J., Hamilton, R. L., Curioni, G., Quick, S. E., Kourmouli, A., Hannah, D. M., and Comer‐Warner, S. A.: BIFoR FACE: Water-soil-vegetation-atmosphere data from a temperate deciduous forest catchment, including under elevated CO2, Hydrol. Process., 35, e14096, https://doi.org/10.1002/hyp.14096, 2021.
Moore-Landecker, E.: Fungal Spores, in: eLS, American Cancer Society,
https://doi.org/10.1002/9780470015902.a0000378.pub2, 2011.
Morcrette, J.-J., Boucher, O., Jones, L., Salmond, D., Bechtold, P.,
Beljaars, A., Benedetti, A., Bonet, A., Kaiser, J. W., Razinger, M., Schulz,
M., Serrar, S., Simmons, A. J., Sofiev, M., Suttie, M., Tompkins, A. M., and
Untch, A.: Aerosol analysis and forecast in the European Centre for
Medium-Range Weather Forecasts Integrated Forecast System: Forward modeling, J. Geophys. Res.-Atmos.,
114, D06206, https://doi.org/10.1029/2008JD011235, 2009.
Nathan, R., Horn, H. S., Chave, J., and Levin, S. A.: Mechanistic models for
tree seed dispersal by wind in dense forests and open landscapes, in: Seed
dispersal and frugivory: ecology, evolution and conservation, Third
International Symposium-Workshop on Frugivores and Seed Dispersal, São
Pedro, Brazil, 6–11 August 2000, edited by: Levey, D. J., Silva, W. R., and
Galetti, M., CABI, Wallingford, 69–82,
https://doi.org/10.1079/9780851995250.0069, 2002.
Norby, R. J., De Kauwe, M. G., Domingues, T. F., Duursma, R. A., Ellsworth,
D. S., Goll, D. S., Lapola, D. M., Luus, K. A., MacKenzie, A. R., Medlyn, B.
E., Pavlick, R., Rammig, A., Smith, B., Thomas, R., Thonicke, K., Walker, A.
P., Yang, X., and Zaehle, S.: Model-data synthesis for the next generation
of forest free-air CO2 enrichment (FACE) experiments, New Phytol., 209, 17–28,
https://doi.org/10.1111/nph.13593, 2016.
Norros, V., Penttilä, R., Suominen, M., and Ovaskainen, O.: Dispersal
may limit the occurrence of specialist wood decay fungi already at small
spatial scales, Oikos, 121, 961–974,
https://doi.org/10.1111/j.1600-0706.2012.20052.x, 2012.
Norros, V., Rannik, Ü., Hussein, T., Petäjä, T., Vesala, T., and
Ovaskainen, O.: Do small spores disperse further than large spores?, Ecology, 95,
1612–1621, https://doi.org/10.1890/13-0877.1, 2014.
O'Connor, D. J., Sadyś, M., Skjøth, C. A., Healy, D. A., Kennedy, R.,
and Sodeau, J. R.: Atmospheric concentrations of Alternaria, Cladosporium,
Ganoderma and Didymella spores monitored in Cork (Ireland) and Worcester
(England) during the summer of 2010, Aerobiologia, 30, 397–411,
https://doi.org/10.1007/s10453-014-9337-3, 2014.
Oneto, D. L., Golan, J., Mazzino, A., Pringle, A., and Seminara, A.: Timing
of fungal spore release dictates survival during atmospheric transport,
P. Natl. Acad. Sci. USA, 117, 5134–5143, https://doi.org/10.1073/pnas.1913752117, 2020.
Page, C. N.: The Ferns of Britain and Ireland, 2nd Edn., CUP, 540 pp., 1997.
Petters, M. D. and Kreidenweis, S. M.: A single parameter representation of hygroscopic growth and cloud condensation nucleus activity, Atmos. Chem. Phys., 7, 1961–1971, https://doi.org/10.5194/acp-7-1961-2007, 2007.
Pope, F. D.: Pollen grains are efficient cloud condensation nuclei, Environ.
Res. Lett., 5, 044015, https://doi.org/10.1088/1748-9326/5/4/044015, 2010.
Pöschl, U.: Atmospheric Aerosols: Composition, Transformation, Climate
and Health Effects, Angew. Chem. Int. Edit., 44, 7520–7540, https://doi.org/10.1002/anie.200501122,
2005.
Raupach, M. R., Finnigan, J. J., and Brunet, Y.: Coherent Eddies and
Turbulence in Vegetation Canopies: The Mixing-Layer Analogy, Bound.-Lay Meteorol., 25th Anniversary Volume, 351–382,
https://doi.org/10.1007/978-94-017-0944-6_15, 1996.
R Core Team: R: A Language and Environment for Statistical Computing, R
Foundation for Statistical Computing, Vienna, Austria, https://www.R-project.org (last access: 27 April 2022), 2020.
Reinmuth-Selzle, K., Kampf, C. J., Lucas, K., Lang-Yona, N.,
Fröhlich-Nowoisky, J., Shiraiwa, M., Lakey, P. S. J., Lai, S., Liu, F.,
Kunert, A. T., Ziegler, K., Shen, F., Sgarbanti, R., Weber, B.,
Bellinghausen, I., Saloga, J., Weller, M. G., Duschl, A., Schuppan, D., and
Pöschl, U.: Air Pollution and Climate Change Effects on Allergies in the
Anthropocene: Abundance, Interaction, and Modification of Allergens and
Adjuvants, Environ. Sci. Technol., 51, 4119–4141,
https://doi.org/10.1021/acs.est.6b04908, 2017.
Reponen, T., Willeke, K., Ulevicius, V., Reponen, A., and Grinshpun, S. A.:
Effect of relative humidity on the aerodynamic diameter and respiratory
deposition of fungal spores, Atmos. Environ., 30, 3967–3974,
https://doi.org/10.1016/1352-2310(96)00128-8, 1996.
Sadyś, M., Skjøth, C. A., and Kennedy, R.: Back-trajectories show
export of airborne fungal spores (Ganoderma sp.) from forests to
agricultural and urban areas in England, Atmos. Environ., 84,
88–99, https://doi.org/10.1016/j.atmosenv.2013.11.015, 2014.
Sadyś, M., Adams-Groom, B., Herbert, R. J., and Kennedy, R.: Comparisons
of fungal spore distributions using air sampling at Worcester, England
(2006–2010), Aerobiologia, 32, 619–634,
https://doi.org/10.1007/s10453-016-9436-4, 2016a.
Sadyś, M., Kennedy, R., and West, J. S.: Potential impact of climate
change on fungal distributions: analysis of 2 years of contrasting weather
in the UK, Aerobiologia, 32, 127–137,
https://doi.org/10.1007/s10453-015-9402-6, 2016b.
Sesartic, A. and Dallafior, T. N.: Global fungal spore emissions, review and synthesis of literature data, Biogeosciences, 8, 1181–1192, https://doi.org/10.5194/bg-8-1181-2011, 2011.
Sousan, S., Koehler, K., Hallett, L., and Peters, T. M.: Evaluation of the
Alphasense optical particle counter (OPC-N2) and the Grimm portable aerosol
spectrometer (PAS-1.108), Aerosol. Sci. Tech., 50, 1352–1365,
https://doi.org/10.1080/02786826.2016.1232859, 2016.
Stephens, R. B. and Rowe, R. J.: The underappreciated role of rodent
generalists in fungal spore dispersal networks, Ecology, 101, e02972,
https://doi.org/10.1002/ecy.2972, 2020.
Su, H. B., Shaw, R. H., Pawu, K. T., Moeng, C. H., and Sullivan, P. P.:
Turbulent statistics of neutrally stratified flow within and above a sparse
forest from large-eddy simulation and field observations, Bound.-Lay. Meteorol., 88, 363–397,
https://doi.org/10.1023/A:1001108411184, 1998.
Tesmer, J. and Schnittler, M.: Sedimentation velocity of myxomycete spores, Mycol. Prog.,
6, 229–234, https://doi.org/10.1007/s11557-007-0539-8, 2007.
Van Norman, K., Lippert, J., Rivers-Pankratz, D., Holmes, R., and Mayrsohn, C.: Sporocarp Survey Protocol for Macrofungi, version 1.0, Portland, OR, Interagency Special Status/Sensitive Species Program, U.S. Department of Interior, Bureau of Land Management, Oregon/Washington and U.S. Department of Agriculture, Forest Service, Region 6, 16 pp., 2008.
Wickham, H.: ggplot2: Elegant Graphics for Data Analysis, 2016.
Wickham, H., Averick, M., Bryan, J., Chang, W., McGowan, L. D.,
François, R., Grolemund, G., Hayes, A., Henry, L., Hester, J., Kuhn, M.,
Pedersen, T. L., Miller, E., Bache, S. M., Müller, K., Ooms, J.,
Robinson, D., Seidel, D. P., Spinu, V., Takahashi, K., Vaughan, D., Wilke,
C., Woo, K., and Yutani, H.: Welcome to the Tidyverse, J. Open. Source Softw., 4, 1686,
https://doi.org/10.21105/joss.01686, 2019.
Welcome to the Tidyverse: https://tidyverse.tidyverse.org/articles/paper.html, last access: 11 May
2021.
Wolf, J., Johnson, N. C., Rowland, D. L., and Reich, P. B.: Elevated CO2 and
plant species richness impact arbuscular mycorrhizal fungal spore
communities, New Phytol., 157, 579–588, 2003.
Wolf, J., O'Neill, N. R., Rogers, C. A., Muilenberg, M. L., and Ziska, L.
H.: Elevated atmospheric carbon dioxide concentrations amplify Alternaria
alternate sporulation and total antigen production, Environ. Health Persp., 118, 1223–1228,
https://doi.org/10.1289/ehp.0901867, 2010.
Ziegler, C., Kulawska, A., Kourmouli, A., Hamilton, L., Shi, Z., MacKenzie,
A. R., Dyson, R. J., and Johnston, I. G.: Quantification and uncertainty of
root growth stimulation by elevated CO2 in mature temperate deciduous
forest, BioRxiv [preprint], https://doi.org/10.1101/2021.04.15.440027, 2021.
Short summary
Forest environments contain a wide variety of airborne biological particles (bioaerosols) important for plant and animal health and biosphere–atmosphere interactions. Using low-cost sensors and a free-air carbon dioxide enrichment (FACE) experiment, we monitor the impact of enhanced CO2 on airborne particles. No effect of the enhanced CO2 treatment on total particle concentrations was observed, but a potential suppression of high concentration bioaerosol events was detected under enhanced CO2.
Forest environments contain a wide variety of airborne biological particles (bioaerosols)...
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