Articles | Volume 19, issue 22
https://doi.org/10.5194/bg-19-5151-2022
© Author(s) 2022. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/bg-19-5151-2022
© Author(s) 2022. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Research article
| 
14 Nov 2022
Research article |
| 14 Nov 2022
| 14 Nov 2022
Metabolic alkalinity release from large port facilities (Hamburg, Germany) and impact on coastal carbon storage
Mona Norbisrath
CORRESPONDING AUTHOR
Institute of Carbon Cycles, Helmholtz-Zentrum Hereon, 21502 Geesthacht, Germany
Institute for Chemistry and Biology of the Marine Environment, Carl
von Ossietzky University Oldenburg, 26129 Oldenburg, Germany
Johannes Pätsch
Institute of Carbon Cycles, Helmholtz-Zentrum Hereon, 21502 Geesthacht, Germany
Institute of Oceanography, University Hamburg, 20146 Hamburg, Germany
Kirstin Dähnke
Institute of Carbon Cycles, Helmholtz-Zentrum Hereon, 21502 Geesthacht, Germany
Tina Sanders
Institute of Carbon Cycles, Helmholtz-Zentrum Hereon, 21502 Geesthacht, Germany
Gesa Schulz
Institute of Carbon Cycles, Helmholtz-Zentrum Hereon, 21502 Geesthacht, Germany
Institute of Geology, Center for Earth System Research and
Sustainability (CEN), University Hamburg, 20146 Hamburg, Germany
Justus E. E. van Beusekom
Institute of Carbon Cycles, Helmholtz-Zentrum Hereon, 21502 Geesthacht, Germany
Helmuth Thomas
Institute of Carbon Cycles, Helmholtz-Zentrum Hereon, 21502 Geesthacht, Germany
Institute for Chemistry and Biology of the Marine Environment, Carl
von Ossietzky University Oldenburg, 26129 Oldenburg, Germany
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We present an observational study investigating total alkalinity (TA) in the Dutch Wadden Sea. Discrete water samples were used to identify the TA spatial distribution patterns and locate and shed light on TA sources. By observing a tidal cycle, the sediments and pore water exchange were identified as local TA sources. We assumed metabolically driven CaCO3 dissolution as the TA source in the upper, oxic sediments and anaerobic metabolic processes as TA sources in the deeper, anoxic ones.
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Gesa Schulz, Tina Sanders, Justus E. E. van Beusekom, Yoana G. Voynova, Andreas Schöl, and Kirstin Dähnke
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Krysten Rutherford, Katja Fennel, Dariia Atamanchuk, Douglas Wallace, and Helmuth Thomas
Biogeosciences, 18, 6271–6286, https://doi.org/10.5194/bg-18-6271-2021, https://doi.org/10.5194/bg-18-6271-2021, 2021
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Using a regional model of the northwestern North Atlantic shelves in combination with a surface water time series and repeat transect observations, we investigate surface CO2 variability on the Scotian Shelf. The study highlights a strong seasonal cycle in shelf-wide pCO2 and spatial variability throughout the summer months driven by physical events. The simulated net flux of CO2 on the Scotian Shelf is out of the ocean, deviating from the global air–sea CO2 flux trend in continental shelves.
Onur Kerimoglu, Yoana G. Voynova, Fatemeh Chegini, Holger Brix, Ulrich Callies, Richard Hofmeister, Knut Klingbeil, Corinna Schrum, and Justus E. E. van Beusekom
Biogeosciences, 17, 5097–5127, https://doi.org/10.5194/bg-17-5097-2020, https://doi.org/10.5194/bg-17-5097-2020, 2020
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In this study, using extensive field observations and a numerical model, we analyzed the physical and biogeochemical structure of a coastal system following an extreme flood event. Our results suggest that a number of anomalous observations were driven by a co-occurrence of peculiar meteorological conditions and increased riverine discharges. Our results call for attention to the combined effects of hydrological and meteorological extremes that are anticipated to increase in frequency.
Chantal Mears, Helmuth Thomas, Paul B. Henderson, Matthew A. Charette, Hugh MacIntyre, Frank Dehairs, Christophe Monnin, and Alfonso Mucci
Biogeosciences, 17, 4937–4959, https://doi.org/10.5194/bg-17-4937-2020, https://doi.org/10.5194/bg-17-4937-2020, 2020
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Fabian Schwichtenberg, Johannes Pätsch, Michael Ernst Böttcher, Helmuth Thomas, Vera Winde, and Kay-Christian Emeis
Biogeosciences, 17, 4223–4245, https://doi.org/10.5194/bg-17-4223-2020, https://doi.org/10.5194/bg-17-4223-2020, 2020
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Ocean acidification has a range of potentially harmful consequences for marine organisms. It is related to total alkalinity (TA) mainly produced in oxygen-poor situations like sediments in tidal flats. TA reduces the sensitivity of a water body to acidification. The decomposition of organic material and subsequent TA release in the tidal areas of the North Sea (Wadden Sea) is responsible for reduced acidification in the southern North Sea. This is shown with the results of an ecosystem model.
Alexis Beaupré-Laperrière, Alfonso Mucci, and Helmuth Thomas
Biogeosciences, 17, 3923–3942, https://doi.org/10.5194/bg-17-3923-2020, https://doi.org/10.5194/bg-17-3923-2020, 2020
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Ocean acidification is the process by which the oceans are changing due to carbon dioxide emissions from human activities. Studying this process in the Arctic Ocean is essential as this ocean and its ecosystems are more vulnerable to the effects of acidification. Water chemistry measurements made in recent years show that waters in and around the Canadian Arctic Archipelago are considerably affected by this process and show dynamic conditions that might have an impact on local marine organisms.
Alexander Bratek, Justus E. E. van
Beusekom, Andreas Neumann, Tina Sanders, Jana Friedrich, Kay-Christian Emeis, and Kirstin Dähnke
Biogeosciences, 17, 2839–2851, https://doi.org/10.5194/bg-17-2839-2020, https://doi.org/10.5194/bg-17-2839-2020, 2020
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The following paper highlights the importance of benthic N-transformation rates in different sediment types in the southern North Sea as a source of fixed nitrogen for primary producers and also as a sink of fixed nitrogen. Sedimentary fluxes of dissolved inorganic nitrogen support ∼7 to 59 % of the average annual primary production. Semi-permeable and permeable sediments contribute ∼68 % of the total benthic N2 production rates, counteracting eutrophication in the southern North Sea.
Louise Delaigue, Helmuth Thomas, and Alfonso Mucci
Biogeosciences, 17, 547–566, https://doi.org/10.5194/bg-17-547-2020, https://doi.org/10.5194/bg-17-547-2020, 2020
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This paper reports on the first compilation and analysis of the surface water pCO2 distribution in the Saguenay Fjord, the southernmost subarctic fjord in the Northern Hemisphere, and thus fills a significant knowledge gap in current regional estimates of estuarine CO2 emissions.
Natalie C. Harms, Niko Lahajnar, Birgit Gaye, Tim Rixen, Kirstin Dähnke, Markus Ankele, Ulrich Schwarz-Schampera, and Kay-Christian Emeis
Biogeosciences, 16, 2715–2732, https://doi.org/10.5194/bg-16-2715-2019, https://doi.org/10.5194/bg-16-2715-2019, 2019
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Johannes Pein, Annika Eisele, Richard Hofmeister, Tina Sanders, Ute Daewel, Emil V. Stanev, Justus van Beusekom, Joanna Staneva, and Corinna Schrum
Biogeosciences Discuss., https://doi.org/10.5194/bg-2019-265, https://doi.org/10.5194/bg-2019-265, 2019
Revised manuscript not accepted
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The Elbe estuary is subject to vigorous tidal forcing from the sea side and considerable biological inputs from the land side. Our 3D numerical coupled physical-biogeochemical integrates these forcing signals and provides highly realistic hindcasts of the associated dynamics. Model simulations show that the freshwater part of Elbe estuary is inhabited by plankton. According to simulations these organism play a key role in converting organic inputs into nitrate, the major inorganic nutrient.
Rachel M. Horwitz, Alex E. Hay, William J. Burt, Richard A. Cheel, Joseph Salisbury, and Helmuth Thomas
Biogeosciences, 16, 605–616, https://doi.org/10.5194/bg-16-605-2019, https://doi.org/10.5194/bg-16-605-2019, 2019
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High-frequency CO2 measurements are used to quantify the daily and tidal cycles of dissolved carbon in the Bay of Fundy – home to the world's largest tides. The oscillating tidal flows drive a net carbon transport, and these results suggest that previously unaccounted for tidal variation could substantially modulate the coastal ocean's response to global ocean acidification. Evaluating the impact of rising atmospheric CO2 on coastal systems requires understanding this short-term variability.
Johannes Pätsch, Wilfried Kühn, and Katharina Dorothea Six
Biogeosciences, 15, 3293–3309, https://doi.org/10.5194/bg-15-3293-2018, https://doi.org/10.5194/bg-15-3293-2018, 2018
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Biogeochemical shelf sea modelling has a long tradition. Most models include early diagenesis sediment modules for remineralization of organic matter. The model presented here also simulates alkalinity, which is exported into the pelagic system. There the produced alkalinity joins in the carbonate system and is able to buffer invading atmospheric CO2. The input of nitrate via rivers stimulates alkalinity generation within the sediment, which in turn reduces the acidification of coastal areas.
Jonathan Lemay, Helmuth Thomas, Susanne E. Craig, William J. Burt, Katja Fennel, and Blair J. W. Greenan
Biogeosciences, 15, 2111–2123, https://doi.org/10.5194/bg-15-2111-2018, https://doi.org/10.5194/bg-15-2111-2018, 2018
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We report a detailed mechanistic investigation of the impact of Hurricane Arthur on the CO2 cycling on the Scotian Shelf. We can show that in contrast to common thinking, the deepening of the surface during the summer months can lead to increased CO2 uptake as carbon-poor waters from subsurface water are brought up to the surface. Only during prolonged storm events is the deepening of the mixed layer strong enough to bring the (expected) carbon-rich water to the surface.
Jacoba Mol, Helmuth Thomas, Paul G. Myers, Xianmin Hu, and Alfonso Mucci
Biogeosciences, 15, 1011–1027, https://doi.org/10.5194/bg-15-1011-2018, https://doi.org/10.5194/bg-15-1011-2018, 2018
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In the fall of 2014, the upwelling of water from the deep Canada Basin brought water onto the shallower Mackenzie Shelf in the Beaufort Sea. This increased the concentration of CO2 in water on the shelf, which alters pH and changes the transfer of CO2 between the ocean and atmosphere. These findings were a combined result of water sampling for CO2 parameters and the use of a computer model that simulates water movement in the ocean.
Tom J. S. Cox, Justus E. E. van Beusekom, and Karline Soetaert
Biogeosciences, 14, 5271–5280, https://doi.org/10.5194/bg-14-5271-2017, https://doi.org/10.5194/bg-14-5271-2017, 2017
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Photosynthesis by phytoplankton is a key source of oxygen (O2) in aquatic systems. We have developed a mathematical technique to calculate the rate of photosynthesis from time series of O2. Additionally, the approach leads to a better understanding of the influence on O2 measurements of the tides in coasts and estuaries. The results are important for correctly interpreting the data that are gathered by a growing set of continuous O2 sensors that are deployed around the world.
Rachel Hussherr, Maurice Levasseur, Martine Lizotte, Jean-Éric Tremblay, Jacoba Mol, Helmuth Thomas, Michel Gosselin, Michel Starr, Lisa A. Miller, Tereza Jarniková, Nina Schuback, and Alfonso Mucci
Biogeosciences, 14, 2407–2427, https://doi.org/10.5194/bg-14-2407-2017, https://doi.org/10.5194/bg-14-2407-2017, 2017
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This study assesses the impact of ocean acidification on phytoplankton and its synthesis of the climate-active gas dimethyl sulfide (DMS), as well as its modulation, by two contrasting light regimes in the Arctic. The light regimes tested had no significant impact on either the phytoplankton or DMS concentration, whereas both variables decreased linearly with the decrease in pH. Thus, a rapid decrease in surface water pH could alter the algal biomass and inhibit DMS production in the Arctic.
Juliane Jacob, Tina Sanders, and Kirstin Dähnke
Biogeosciences, 13, 5649–5659, https://doi.org/10.5194/bg-13-5649-2016, https://doi.org/10.5194/bg-13-5649-2016, 2016
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During a flood in the Elbe in June 2013, a unique co-occurrence of ammonium, nitrite and nitrate in the water column was found. SPM and nutrient concentrations as well as isotopes were analysed. We calculated an isotope effect 15ε of −10.0 ± 0.1 ‰ during net nitrite and 15ε of −4.0 ± 0.1 ‰ and 18ε of −5.3 ± 0.1 ‰ during net nitrate consumption. A simple box-model calculation results in combined riparian denitrification and 22 to 36 % nitrification.
William J. Burt, Helmuth Thomas, Lisa A. Miller, Mats A. Granskog, Tim N. Papakyriakou, and Leah Pengelly
Biogeosciences, 13, 4659–4671, https://doi.org/10.5194/bg-13-4659-2016, https://doi.org/10.5194/bg-13-4659-2016, 2016
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This study assesses the state of the carbon cycle in Hudson Bay, an ecologically important region of the Canadian Arctic. Results show that river input, sea-ice melt, biological activity, and general circulation patterns all have significant, and regionally dependent, impacts on the carbon cycle. The study also highlights the importance of detailed sampling procedures in highly stratified waters, and reveals that the deep Hudson Bay is primarily filled with waters of Pacific origin.
Fabian Große, Naomi Greenwood, Markus Kreus, Hermann-Josef Lenhart, Detlev Machoczek, Johannes Pätsch, Lesley Salt, and Helmuth Thomas
Biogeosciences, 13, 2511–2535, https://doi.org/10.5194/bg-13-2511-2016, https://doi.org/10.5194/bg-13-2511-2016, 2016
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We used the ECOHAM5 model to provide a consistent picture of the physical and biological drivers of oxygen deficiency in the North Sea. Regions susceptible to oxygen deficiency are characterised by low tidal mixing and moderate water depth (~ 40 m). Variations in upper layer productivity drive the year-to-year variability of bottom oxygen conditions. The model-based analysis reveals that benthic and pelagic remineralisation account for 90 % of bottom oxygen consumption observed at North Dogger.
N. Jiao, C. Robinson, F. Azam, H. Thomas, F. Baltar, H. Dang, N. J. Hardman-Mountford, M. Johnson, D. L. Kirchman, B. P. Koch, L. Legendre, C. Li, J. Liu, T. Luo, Y.-W. Luo, A. Mitra, A. Romanou, K. Tang, X. Wang, C. Zhang, and R. Zhang
Biogeosciences, 11, 5285–5306, https://doi.org/10.5194/bg-11-5285-2014, https://doi.org/10.5194/bg-11-5285-2014, 2014
A. Canion, J. E. Kostka, T. M. Gihring, M. Huettel, J. E. E. van Beusekom, H. Gao, G. Lavik, and M. M. M. Kuypers
Biogeosciences, 11, 309–320, https://doi.org/10.5194/bg-11-309-2014, https://doi.org/10.5194/bg-11-309-2014, 2014
B. Gaye, B. Nagel, K. Dähnke, T. Rixen, N. Lahajnar, and K.-C. Emeis
Biogeosciences, 10, 7689–7702, https://doi.org/10.5194/bg-10-7689-2013, https://doi.org/10.5194/bg-10-7689-2013, 2013
S. E. Craig, H. Thomas, C. T. Jones, W. K. W. Li, B. J. W. Greenan, E. H. Shadwick, and W. J. Burt
Biogeosciences Discuss., https://doi.org/10.5194/bgd-10-11255-2013, https://doi.org/10.5194/bgd-10-11255-2013, 2013
Revised manuscript not accepted
A. Lindenthal, B. Langmann, J. Pätsch, I. Lorkowski, and M. Hort
Biogeosciences, 10, 3715–3729, https://doi.org/10.5194/bg-10-3715-2013, https://doi.org/10.5194/bg-10-3715-2013, 2013
K. Dähnke and B. Thamdrup
Biogeosciences, 10, 3079–3088, https://doi.org/10.5194/bg-10-3079-2013, https://doi.org/10.5194/bg-10-3079-2013, 2013
W. J. Burt, H. Thomas, K. Fennel, and E. Horne
Biogeosciences, 10, 53–66, https://doi.org/10.5194/bg-10-53-2013, https://doi.org/10.5194/bg-10-53-2013, 2013
Related subject area
Biogeochemistry: Coastal Ocean
Assessing the impacts of simulated ocean alkalinity enhancement on viability and growth of nearshore species of phytoplankton
Responses of microbial metabolic rates to non-equilibrated silicate- versus calcium-based ocean alkalinity enhancement
High metabolic zinc demand within native Amundsen and Ross sea phytoplankton communities determined by stable isotope uptake rate measurements
The influence of zooplankton and oxygen on the particulate organic carbon flux in the Benguela Upwelling System
Reviews and syntheses: Biological indicators of low-oxygen stress in marine water-breathing animals
Temperature-enhanced effects of iron on Southern Ocean phytoplankton
Riverine nutrient impact on global ocean nitrogen cycle feedbacks and marine primary production in an Earth system model
The Northeast Greenland Shelf as a potential late-summer CO2 source to the atmosphere
Technical note: Ocean Alkalinity Enhancement Pelagic Impact Intercomparison Project (OAEPIIP)
Estimates of carbon sequestration potential in an expanding Arctic fjord (Hornsund, Svalbard) affected by dark plumes of glacial meltwater
An assessment of ocean alkalinity enhancement using aqueous hydroxides: kinetics, efficiency, and precipitation thresholds
Dissolved nitric oxide in the lower Elbe Estuary and the Port of Hamburg area
Variable contribution of wastewater treatment plant effluents to downstream nitrous oxide concentrations and emissions
Long-term variations of pH in coastal waters along the Korean Peninsula
Distribution of nutrients and dissolved organic matter in a eutrophic equatorial estuary: the Johor River and the East Johor Strait
Investigating the effect of silicate- and calcium-based ocean alkalinity enhancement on diatom silicification
Ocean alkalinity enhancement using sodium carbonate salts does not lead to measurable changes in Fe dynamics in a mesocosm experiment
Quantification and mitigation of bottom-trawling impacts on sedimentary organic carbon stocks in the North Sea
Influence of ocean alkalinity enhancement with olivine or steel slag on a coastal plankton community in Tasmania
Multi-model comparison of trends and controls of near-bed oxygen concentration on the northwest European continental shelf under climate change
Picoplanktonic methane production in eutrophic surface waters
Vertical mixing alleviates autumnal oxygen deficiency in the central North Sea
Hypoxia also occurs in small highly turbid estuaries: the example of the Charente (Bay of Biscay)
Seasonality and response of ocean acidification and hypoxia to major environmental anomalies in the southern Salish Sea, North America (2014–2018)
Ocean Alkalinity Enhancement (OAE) does not cause cellular stress in a phytoplankton community of the sub-tropical Atlantic Ocean
Countering the effect of ocean acidification in coastal sediments through carbonate mineral additions
Oceanographic processes driving low-oxygen conditions inside Patagonian fjords
Above- and belowground plant mercury dynamics in a salt marsh estuary in Massachusetts, USA
Variability and drivers of carbonate chemistry at shellfish aquaculture sites in the Salish Sea, British Columbia
Unusual Hemiaulus bloom influences ocean productivity in Northeastern US Shelf waters
Insights into carbonate environmental conditions in the Chukchi Sea
UAV approaches for improved mapping of vegetation cover and estimation of carbon storage of small saltmarshes: examples from Loch Fleet, northeast Scotland
Iron “ore” nothing: benthic iron fluxes from the oxygen-deficient Santa Barbara Basin enhance phytoplankton productivity in surface waters
Marine anoxia initiates giant sulfur-oxidizing bacterial mat proliferation and associated changes in benthic nitrogen, sulfur, and iron cycling in the Santa Barbara Basin, California Borderland
Uncertainty in the evolution of northwestern North Atlantic circulation leads to diverging biogeochemical projections
The additionality problem of ocean alkalinity enhancement
Short-term variation in pH in seawaters around coastal areas of Japan: characteristics and forcings
Revisiting the applicability and constraints of molybdenum- and uranium-based paleo redox proxies: comparing two contrasting sill fjords
Influence of a small submarine canyon on biogenic matter export flux in the lower St. Lawrence Estuary, eastern Canada
Single-celled bioturbators: benthic foraminifera mediate oxygen penetration and prokaryotic diversity in intertidal sediment
Assessing impacts of coastal warming, acidification, and deoxygenation on Pacific oyster (Crassostrea gigas) farming: a case study in the Hinase area, Okayama Prefecture, and Shizugawa Bay, Miyagi Prefecture, Japan
Multiple nitrogen sources for primary production inferred from δ13C and δ15N in the southern Sea of Japan
Influence of manganese cycling on alkalinity in the redox stratified water column of Chesapeake Bay
Estuarine flocculation dynamics of organic carbon and metals from boreal acid sulfate soils
Drivers of particle sinking velocities in the Peruvian upwelling system
Impacts and uncertainties of climate-induced changes in watershed inputs on estuarine hypoxia
Considerations for hypothetical carbon dioxide removal via alkalinity addition in the Amazon River watershed
High metabolism and periodic hypoxia associated with drifting macrophyte detritus in the shallow subtidal Baltic Sea
Production and accumulation of reef framework by calcifying corals and macroalgae on a remote Indian Ocean cay
Zooplankton community succession and trophic links during a mesocosm experiment in the coastal upwelling off Callao Bay (Peru)
Jessica L. Oberlander, Mackenzie E. Burke, Cat A. London, and Hugh L. MacIntyre
Biogeosciences, 22, 499–512, https://doi.org/10.5194/bg-22-499-2025, https://doi.org/10.5194/bg-22-499-2025, 2025
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Ocean alkalinity enhancement (OAE) is a promising negative emission technology that results in the net sequestration of atmospheric carbon. In this paper, we assess the potential impact of OAE on phytoplankton through an analysis of prior studies and the effects of simulated OAE on photosynthetic competence. Our findings suggest that there may be little if any significant impact on most phytoplankton studied to date if OAE is conducted in well-flushed, nearshore environments.
Laura Marín-Samper, Javier Arístegui, Nauzet Hernández-Hernández, and Ulf Riebesell
Biogeosciences, 21, 5707–5724, https://doi.org/10.5194/bg-21-5707-2024, https://doi.org/10.5194/bg-21-5707-2024, 2024
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This study exposed a natural community to two non-CO2-equilibrated ocean alkalinity enhancement (OAE) deployments using different minerals. Adding alkalinity in this manner decreases dissolved CO2, essential for photosynthesis. While photosynthesis was not suppressed, bloom formation was mildly delayed, potentially impacting marine food webs. The study emphasizes the need for further research on OAE without prior equilibration and on its ecological implications.
Riss M. Kell, Rebecca J. Chmiel, Deepa Rao, Dawn M. Moran, Matthew R. McIlvin, Tristan J. Horner, Nicole L. Schanke, Ichiko Sugiyama, Robert B. Dunbar, Giacomo R. DiTullio, and Mak A. Saito
Biogeosciences, 21, 5685–5706, https://doi.org/10.5194/bg-21-5685-2024, https://doi.org/10.5194/bg-21-5685-2024, 2024
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Despite interest in modeling the biogeochemical uptake and cycling of the trace metal zinc (Zn), measurements of Zn uptake in natural marine phytoplankton communities have not been conducted previously. To fill this gap, we employed a stable isotope uptake rate measurement method to quantify Zn uptake into natural phytoplankton assemblages within the Southern Ocean. Zn demand was high and rapid enough to depress the inventory of Zn available to phytoplankton on seasonal timescales.
Luisa Chiara Meiritz, Tim Rixen, Anja Karin van der Plas, Tarron Lamont, and Niko Lahajnar
Biogeosciences, 21, 5261–5276, https://doi.org/10.5194/bg-21-5261-2024, https://doi.org/10.5194/bg-21-5261-2024, 2024
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Moored and drifting sediment trap experiments in the northern (nBUS) and southern (sBUS) Benguela Upwelling System showed that active carbon fluxes by vertically migrating zooplankton were about 3 times higher in the sBUS than in the nBUS. Despite these large variabilities, the mean passive particulate organic carbon (POC) fluxes were almost equal in the two subsystems. The more intense near-bottom oxygen minimum layer seems to lead to higher POC fluxes and accumulation rates in the nBUS.
Michael R. Roman, Andrew H. Altieri, Denise Breitburg, Erica M. Ferrer, Natalya D. Gallo, Shin-ichi Ito, Karin Limburg, Kenneth Rose, Moriaki Yasuhara, and Lisa A. Levin
Biogeosciences, 21, 4975–5004, https://doi.org/10.5194/bg-21-4975-2024, https://doi.org/10.5194/bg-21-4975-2024, 2024
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Oxygen-depleted ocean waters have increased worldwide. In order to improve our understanding of the impacts of this oxygen loss on marine life it is essential that we develop reliable indicators that track the negative impacts of low oxygen. We review various indicators of low-oxygen stress for marine animals including their use, research needs, and application to confront the challenges of ocean oxygen loss.
Charlotte Eich, Mathijs van Manen, J. Scott P. McCain, Loay J. Jabre, Willem H. van de Poll, Jinyoung Jung, Sven B. E. H. Pont, Hung-An Tian, Indah Ardiningsih, Gert-Jan Reichart, Erin M. Bertrand, Corina P. D. Brussaard, and Rob Middag
Biogeosciences, 21, 4637–4663, https://doi.org/10.5194/bg-21-4637-2024, https://doi.org/10.5194/bg-21-4637-2024, 2024
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Phytoplankton growth in the Southern Ocean (SO) is often limited by low iron (Fe) concentrations. Sea surface warming impacts Fe availability and can affect phytoplankton growth. We used shipboard Fe clean incubations to test how changes in Fe and temperature affect SO phytoplankton. Their abundances usually increased with Fe addition and temperature increase, with Fe being the major factor. These findings imply potential shifts in ecosystem structure, impacting food webs and elemental cycling.
Miriam Tivig, David P. Keller, and Andreas Oschlies
Biogeosciences, 21, 4469–4493, https://doi.org/10.5194/bg-21-4469-2024, https://doi.org/10.5194/bg-21-4469-2024, 2024
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Marine biological production is highly dependent on the availability of nitrogen and phosphorus. Rivers are the main source of phosphorus to the oceans but poorly represented in global model oceans. We include dissolved nitrogen and phosphorus from river export in a global model ocean and find that the addition of riverine phosphorus affects marine biology on millennial timescales more than riverine nitrogen alone. Globally, riverine phosphorus input increases primary production rates.
Esdoorn Willcox, Marcos Lemes, Thomas Juul-Pedersen, Mikael Kristian Sejr, Johnna Marchiano Holding, and Søren Rysgaard
Biogeosciences, 21, 4037–4050, https://doi.org/10.5194/bg-21-4037-2024, https://doi.org/10.5194/bg-21-4037-2024, 2024
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In this work, we measured the chemistry of seawater from samples obtained from different depths and locations off the east coast of the Northeast Greenland National Park to determine what is influencing concentrations of dissolved CO2. Historically, the region has always been thought to take up CO2 from the atmosphere, but we show that it is possible for the region to become a source in late summer. We discuss the variables that may be related to such changes.
Lennart Thomas Bach, Aaron James Ferderer, Julie LaRoche, and Kai Georg Schulz
Biogeosciences, 21, 3665–3676, https://doi.org/10.5194/bg-21-3665-2024, https://doi.org/10.5194/bg-21-3665-2024, 2024
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Ocean alkalinity enhancement (OAE) is an emerging marine CO2 removal method, but its environmental effects are insufficiently understood. The OAE Pelagic Impact Intercomparison Project (OAEPIIP) provides funding for a standardized and globally replicated microcosm experiment to study the effects of OAE on plankton communities. Here, we provide a detailed manual for the OAEPIIP experiment. We expect OAEPIIP to help build scientific consensus on the effects of OAE on plankton.
Marlena Szeligowska, Déborah Benkort, Anna Przyborska, Mateusz Moskalik, Bernabé Moreno, Emilia Trudnowska, and Katarzyna Błachowiak-Samołyk
Biogeosciences, 21, 3617–3639, https://doi.org/10.5194/bg-21-3617-2024, https://doi.org/10.5194/bg-21-3617-2024, 2024
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The European Arctic is experiencing rapid regional warming, causing glaciers that terminate in the sea to retreat onto land. Due to this process, the area of a well-studied fjord, Hornsund, has increased by around 100 km2 (40%) since 1976. Combining satellite and in situ data with a mathematical model, we estimated that, despite some negative consequences of glacial meltwater release, such emerging coastal waters could mitigate climate change by increasing carbon uptake and storage by sediments.
Mallory C. Ringham, Nathan Hirtle, Cody Shaw, Xi Lu, Julian Herndon, Brendan R. Carter, and Matthew D. Eisaman
Biogeosciences, 21, 3551–3570, https://doi.org/10.5194/bg-21-3551-2024, https://doi.org/10.5194/bg-21-3551-2024, 2024
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Ocean alkalinity enhancement leverages the large surface area and carbon storage capacity of the oceans to store atmospheric CO2 as dissolved bicarbonate. We monitored CO2 uptake in seawater treated with NaOH to establish operational boundaries for carbon removal experiments. Results show that CO2 equilibration occurred on the order of weeks to months, was consistent with values expected from equilibration calculations, and was limited by mineral precipitation at high pH and CaCO3 saturation.
Riel Carlo O. Ingeniero, Gesa Schulz, and Hermann W. Bange
Biogeosciences, 21, 3425–3440, https://doi.org/10.5194/bg-21-3425-2024, https://doi.org/10.5194/bg-21-3425-2024, 2024
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Our research is the first to measure dissolved NO concentrations in temperate estuarine waters, providing insights into its distribution under varying conditions and enhancing our understanding of its production processes. Dissolved NO was supersaturated in the Elbe Estuary, indicating that it is a source of atmospheric NO. The observed distribution of dissolved NO most likely resulted from nitrification.
Weiyi Tang, Jeff Talbott, Timothy Jones, and Bess B. Ward
Biogeosciences, 21, 3239–3250, https://doi.org/10.5194/bg-21-3239-2024, https://doi.org/10.5194/bg-21-3239-2024, 2024
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Wastewater treatment plants (WWTPs) are known to be hotspots of greenhouse gas emissions. However, the impact of WWTPs on the emission of the greenhouse gas N2O in downstream aquatic environments is less constrained. We found spatially and temporally variable but overall higher N2O concentrations and fluxes in waters downstream of WWTPs, pointing to the need for efficient N2O removal in addition to the treatment of nitrogen in WWTPs.
Yong-Woo Lee, Mi-Ok Park, Seong-Gil Kim, Tae-Hoon Kim, Yong-Hwa Oh, Sang Heun Lee, and Dong Joo Joung
EGUsphere, https://doi.org/10.5194/egusphere-2024-1836, https://doi.org/10.5194/egusphere-2024-1836, 2024
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A long-term pH variation in coastal waters along the Korean peninsula was assessed for the first time, and it exhibited no significant pH change over an 11-year period. This contrasts with the ongoing pH decline in open oceans and other coastal areas. Analysis of environmental data showed that pH is mainly controlled by dissolved oxygen in bottom waters. This suggests that ocean warming could cause a pH decline in Korean coastal waters, affecting many fish and seaweeds aquaculture operations.
Amanda Y. L. Cheong, Kogila Vani Annammala, Ee Ling Yong, Yongli Zhou, Robert S. Nichols, and Patrick Martin
Biogeosciences, 21, 2955–2971, https://doi.org/10.5194/bg-21-2955-2024, https://doi.org/10.5194/bg-21-2955-2024, 2024
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We measured nutrients and dissolved organic matter for 1 year in a eutrophic tropical estuary to understand their sources and cycling. Our data show that the dissolved organic matter originates partly from land and partly from microbial processes in the water. Internal recycling is likely important for maintaining high nutrient concentrations, and we found that there is often excess nitrogen compared to silicon and phosphorus. Our data help to explain how eutrophication persists in this system.
Aaron Ferderer, Kai G. Schulz, Ulf Riebesell, Kirralee G. Baker, Zanna Chase, and Lennart T. Bach
Biogeosciences, 21, 2777–2794, https://doi.org/10.5194/bg-21-2777-2024, https://doi.org/10.5194/bg-21-2777-2024, 2024
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Ocean alkalinity enhancement (OAE) is a promising method of atmospheric carbon removal; however, its ecological impacts remain largely unknown. We assessed the effects of simulated silicate- and calcium-based mineral OAE on diatom silicification. We found that increased silicate concentrations from silicate-based OAE increased diatom silicification. In contrast, the enhancement of alkalinity had no effect on community silicification and minimal effects on the silicification of different genera.
David González-Santana, María Segovia, Melchor González-Dávila, Librada Ramírez, Aridane G. González, Leonardo J. Pozzo-Pirotta, Veronica Arnone, Victor Vázquez, Ulf Riebesell, and J. Magdalena Santana-Casiano
Biogeosciences, 21, 2705–2715, https://doi.org/10.5194/bg-21-2705-2024, https://doi.org/10.5194/bg-21-2705-2024, 2024
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In a recent experiment off the coast of Gran Canaria (Spain), scientists explored a method called ocean alkalinization enhancement (OAE), where carbonate minerals were added to seawater. This process changed the levels of certain ions in the water, affecting its pH and buffering capacity. The researchers were particularly interested in how this could impact the levels of essential trace metals in the water.
Lucas Porz, Wenyan Zhang, Nils Christiansen, Jan Kossack, Ute Daewel, and Corinna Schrum
Biogeosciences, 21, 2547–2570, https://doi.org/10.5194/bg-21-2547-2024, https://doi.org/10.5194/bg-21-2547-2024, 2024
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Seafloor sediments store a large amount of carbon, helping to naturally regulate Earth's climate. If disturbed, some sediment particles can turn into CO2, but this effect is not well understood. Using computer simulations, we found that bottom-contacting fishing gears release about 1 million tons of CO2 per year in the North Sea, one of the most heavily fished regions globally. We show how protecting certain areas could reduce these emissions while also benefitting seafloor-living animals.
Jiaying A. Guo, Robert F. Strzepek, Kerrie M. Swadling, Ashley T. Townsend, and Lennart T. Bach
Biogeosciences, 21, 2335–2354, https://doi.org/10.5194/bg-21-2335-2024, https://doi.org/10.5194/bg-21-2335-2024, 2024
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Ocean alkalinity enhancement aims to increase atmospheric CO2 sequestration by adding alkaline materials to the ocean. We assessed the environmental effects of olivine and steel slag powder on coastal plankton. Overall, slag is more efficient than olivine in releasing total alkalinity and, thus, in its ability to sequester CO2. Slag also had less environmental effect on the enclosed plankton communities when considering its higher CO2 removal potential based on this 3-week experiment.
Giovanni Galli, Sarah Wakelin, James Harle, Jason Holt, and Yuri Artioli
Biogeosciences, 21, 2143–2158, https://doi.org/10.5194/bg-21-2143-2024, https://doi.org/10.5194/bg-21-2143-2024, 2024
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This work shows that, under a high-emission scenario, oxygen concentration in deep water of parts of the North Sea and Celtic Sea can become critically low (hypoxia) towards the end of this century. The extent and frequency of hypoxia depends on the intensity of climate change projected by different climate models. This is the result of a complex combination of factors like warming, increase in stratification, changes in the currents and changes in biological processes.
Sandy E. Tenorio and Laura Farías
Biogeosciences, 21, 2029–2050, https://doi.org/10.5194/bg-21-2029-2024, https://doi.org/10.5194/bg-21-2029-2024, 2024
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Time series studies show that CH4 is highly dynamic on the coastal ocean surface and planktonic communities are linked to CH4 accumulation, as found in coastal upwelling off Chile. We have identified the crucial role of picoplankton (> 3 µm) in CH4 recycling, especially with the addition of methylated substrates (trimethylamine and methylphosphonic acid) during upwelling and non-upwelling periods. These insights improve understanding of surface ocean CH4 recycling, aiding CH4 emission estimates.
Charlotte A. J. Williams, Tom Hull, Jan Kaiser, Claire Mahaffey, Naomi Greenwood, Matthew Toberman, and Matthew R. Palmer
Biogeosciences, 21, 1961–1971, https://doi.org/10.5194/bg-21-1961-2024, https://doi.org/10.5194/bg-21-1961-2024, 2024
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Oxygen (O2) is a key indicator of ocean health. The risk of O2 loss in the productive coastal/continental slope regions is increasing. Autonomous underwater vehicles equipped with O2 optodes provide lots of data but have problems resolving strong vertical O2 changes. Here we show how to overcome this and calculate how much O2 is supplied to the low-O2 bottom waters via mixing. Bursts in mixing supply nearly all of the O2 to bottom waters in autumn, stopping them reaching ecologically low levels.
Sabine Schmidt and Ibrahima Iris Diallo
Biogeosciences, 21, 1785–1800, https://doi.org/10.5194/bg-21-1785-2024, https://doi.org/10.5194/bg-21-1785-2024, 2024
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Along the French coast facing the Bay of Biscay, the large Gironde and Loire estuaries suffer from hypoxia. This prompted a study of the small Charente estuary located between them. This work reveals a minimum oxygen zone in the Charente estuary, which extends for about 25 km. Temperature is the main factor controlling the hypoxia. This calls for the monitoring of small turbid macrotidal estuaries that are vulnerable to hypoxia, a risk expected to increase with global warming.
Simone R. Alin, Jan A. Newton, Richard A. Feely, Samantha Siedlecki, and Dana Greeley
Biogeosciences, 21, 1639–1673, https://doi.org/10.5194/bg-21-1639-2024, https://doi.org/10.5194/bg-21-1639-2024, 2024
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We provide a new multi-stressor data product that allows us to characterize the seasonality of temperature, O2, and CO2 in the southern Salish Sea and delivers insights into the impacts of major marine heatwave and precipitation anomalies on regional ocean acidification and hypoxia. We also describe the present-day frequencies of temperature, O2, and ocean acidification conditions that cross thresholds of sensitive regional species that are economically or ecologically important.
Librada Ramírez, Leonardo J. Pozzo-Pirotta, Aja Trebec, Víctor Manzanares-Vázquez, José L. Díez, Javier Arístegui, Ulf Riebesell, Stephen D. Archer, and María Segovia
EGUsphere, https://doi.org/10.5194/egusphere-2024-847, https://doi.org/10.5194/egusphere-2024-847, 2024
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We studied the potential effects of increasing ocean alkalinity on a natural plankton community in subtropical waters of the Atlantic near Gran Canaria, Spain. Alkalinity is the capacity of water to resist acidification and plankton are usually microscopic plants (phytoplankton) and animals (zooplankton), often less than 2,5 cm in length. This study suggests that increasing ocean alkalinity did not have a significant negative impact on the studied plankton community.
Kadir Bice, Tristen Myers, George Waldbusser, and Christof Meile
EGUsphere, https://doi.org/10.5194/egusphere-2024-796, https://doi.org/10.5194/egusphere-2024-796, 2024
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We studied the effect of addition of carbonate minerals on coastal sediments, We carried out laboratory experiments to quantify the dissolution kinetics and integrated these observations into a numerical model that describes biogeochemical cycling in surficial sediments. Using the model, we demonstrate the buffering effect of the mineral additions and its duration. We quantify the effect under different environmental conditions and assess the potential for increased atmospheric CO2 uptake.
Pamela Linford, Iván Pérez-Santos, Paulina Montero, Patricio A. Díaz, Claudia Aracena, Elías Pinilla, Facundo Barrera, Manuel Castillo, Aida Alvera-Azcárate, Mónica Alvarado, Gabriel Soto, Cécile Pujol, Camila Schwerter, Sara Arenas-Uribe, Pilar Navarro, Guido Mancilla-Gutiérrez, Robinson Altamirano, Javiera San Martín, and Camila Soto-Riquelme
Biogeosciences, 21, 1433–1459, https://doi.org/10.5194/bg-21-1433-2024, https://doi.org/10.5194/bg-21-1433-2024, 2024
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The Patagonian fjords comprise a world region where low-oxygen water and hypoxia conditions are observed. An in situ dataset was used to quantify the mechanism involved in the presence of these conditions in northern Patagonian fjords. Water mass analysis confirmed the contribution of Equatorial Subsurface Water in the advection of the low-oxygen water, and hypoxic conditions occurred when the community respiration rate exceeded the gross primary production.
Ting Wang, Buyun Du, Inke Forbrich, Jun Zhou, Joshua Polen, Elsie M. Sunderland, Prentiss H. Balcom, Celia Chen, and Daniel Obrist
Biogeosciences, 21, 1461–1476, https://doi.org/10.5194/bg-21-1461-2024, https://doi.org/10.5194/bg-21-1461-2024, 2024
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The strong seasonal increases of Hg in aboveground biomass during the growing season and the lack of changes observed after senescence in this salt marsh ecosystem suggest physiologically controlled Hg uptake pathways. The Hg sources found in marsh aboveground tissues originate from a mix of sources, unlike terrestrial ecosystems, where atmospheric GEM is the main source. Belowground plant tissues mostly take up Hg from soils. Overall, the salt marsh currently serves as a small net Hg sink.
Eleanor Simpson, Debby Ianson, Karen E. Kohfeld, Ana C. Franco, Paul A. Covert, Marty Davelaar, and Yves Perreault
Biogeosciences, 21, 1323–1353, https://doi.org/10.5194/bg-21-1323-2024, https://doi.org/10.5194/bg-21-1323-2024, 2024
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Shellfish aquaculture operates in nearshore areas where data on ocean acidification parameters are limited. We show daily and seasonal variability in pH and saturation states of calcium carbonate at nearshore aquaculture sites in British Columbia, Canada, and determine the contributing drivers of this variability. We find that nearshore locations have greater variability than open waters and that the uptake of carbon by phytoplankton is the major driver of pH and saturation state variability.
S. Alejandra Castillo Cieza, Rachel H. R. Stanley, Pierre Marrec, Diana N. Fontaine, E. Taylor Crockford, Dennis J. McGillicuddy Jr., Arshia Mehta, Susanne Menden-Deuer, Emily E. Peacock, Tatiana A. Rynearson, Zoe O. Sandwith, Weifeng Zhang, and Heidi M. Sosik
Biogeosciences, 21, 1235–1257, https://doi.org/10.5194/bg-21-1235-2024, https://doi.org/10.5194/bg-21-1235-2024, 2024
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The coastal ocean in the northeastern USA provides many services, including fisheries and habitats for threatened species. In summer 2019, a bloom occurred of a large unusual phytoplankton, the diatom Hemiaulus, with nitrogen-fixing symbionts. This led to vast changes in productivity and grazing rates in the ecosystem. This work shows that the emergence of one species can have profound effects on ecosystem function. Such changes may become more prevalent as the ocean warms due to climate change.
Claudine Hauri, Brita Irving, Sam Dupont, Rémi Pagés, Donna D. W. Hauser, and Seth L. Danielson
Biogeosciences, 21, 1135–1159, https://doi.org/10.5194/bg-21-1135-2024, https://doi.org/10.5194/bg-21-1135-2024, 2024
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Arctic marine ecosystems are highly susceptible to impacts of climate change and ocean acidification. We present pH and pCO2 time series (2016–2020) from the Chukchi Ecosystem Observatory and analyze the drivers of the current conditions to get a better understanding of how climate change and ocean acidification could affect the ecological niches of organisms.
William Hiles, Lucy C. Miller, Craig Smeaton, and William E. N. Austin
Biogeosciences, 21, 929–948, https://doi.org/10.5194/bg-21-929-2024, https://doi.org/10.5194/bg-21-929-2024, 2024
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Saltmarsh soils may help to limit the rate of climate change by storing carbon. To understand their impacts, they must be accurately mapped. We use drone data to estimate the size of three saltmarshes in NE Scotland. We find that drone imagery, combined with tidal data, can reliably inform our understanding of saltmarsh size. When compared with previous work using vegetation communities, we find that our most reliable new estimates of stored carbon are 15–20 % smaller than previously estimated.
De'Marcus Robinson, Anh L. D. Pham, David J. Yousavich, Felix Janssen, Frank Wenzhöfer, Eleanor C. Arrington, Kelsey M. Gosselin, Marco Sandoval-Belmar, Matthew Mar, David L. Valentine, Daniele Bianchi, and Tina Treude
Biogeosciences, 21, 773–788, https://doi.org/10.5194/bg-21-773-2024, https://doi.org/10.5194/bg-21-773-2024, 2024
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The present study suggests that high release of ferrous iron from the seafloor of the oxygen-deficient Santa Barabara Basin (California) supports surface primary productivity, creating positive feedback on seafloor iron release by enhancing low-oxygen conditions in the basin.
David J. Yousavich, De'Marcus Robinson, Xuefeng Peng, Sebastian J. E. Krause, Frank Wenzhöfer, Felix Janssen, Na Liu, Jonathan Tarn, Franklin Kinnaman, David L. Valentine, and Tina Treude
Biogeosciences, 21, 789–809, https://doi.org/10.5194/bg-21-789-2024, https://doi.org/10.5194/bg-21-789-2024, 2024
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Declining oxygen (O2) concentrations in coastal oceans can threaten people’s ways of life and food supplies. Here, we investigate how mats of bacteria that proliferate on the seafloor of the Santa Barbara Basin sustain and potentially worsen these O2 depletion events through their unique chemoautotrophic metabolism. Our study shows how changes in seafloor microbiology and geochemistry brought on by declining O2 concentrations can help these mats grow as well as how that growth affects the basin.
Krysten Rutherford, Katja Fennel, Lina Garcia Suarez, and Jasmin G. John
Biogeosciences, 21, 301–314, https://doi.org/10.5194/bg-21-301-2024, https://doi.org/10.5194/bg-21-301-2024, 2024
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We downscaled two mid-century (~2075) ocean model projections to a high-resolution regional ocean model of the northwest North Atlantic (NA) shelf. In one projection, the NA shelf break current practically disappears; in the other it remains almost unchanged. This leads to a wide range of possible future shelf properties. More accurate projections of coastal circulation features would narrow the range of possible outcomes of biogeochemical projections for shelf regions.
Lennart Thomas Bach
Biogeosciences, 21, 261–277, https://doi.org/10.5194/bg-21-261-2024, https://doi.org/10.5194/bg-21-261-2024, 2024
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Ocean alkalinity enhancement (OAE) is a widely considered marine carbon dioxide removal method. OAE aims to accelerate chemical rock weathering, which is a natural process that slowly sequesters atmospheric carbon dioxide. This study shows that the addition of anthropogenic alkalinity via OAE can reduce the natural release of alkalinity and, therefore, reduce the efficiency of OAE for climate mitigation. However, the additionality problem could be mitigated via a variety of activities.
Tsuneo Ono, Daisuke Muraoka, Masahiro Hayashi, Makiko Yorifuji, Akihiro Dazai, Shigeyuki Omoto, Takehiro Tanaka, Tomohiro Okamura, Goh Onitsuka, Kenji Sudo, Masahiko Fujii, Ryuji Hamanoue, and Masahide Wakita
Biogeosciences, 21, 177–199, https://doi.org/10.5194/bg-21-177-2024, https://doi.org/10.5194/bg-21-177-2024, 2024
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We carried out parallel year-round observations of pH and related parameters in five stations around the Japan coast. It was found that short-term acidified situations with Omega_ar less than 1.5 occurred at four of five stations. Most of such short-term acidified events were related to the short-term low salinity event, and the extent of short-term pH drawdown at high freshwater input was positively correlated with the nutrient concentration of the main rivers that flow into the coastal area.
K. Mareike Paul, Martijn Hermans, Sami A. Jokinen, Inda Brinkmann, Helena L. Filipsson, and Tom Jilbert
Biogeosciences, 20, 5003–5028, https://doi.org/10.5194/bg-20-5003-2023, https://doi.org/10.5194/bg-20-5003-2023, 2023
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Seawater naturally contains trace metals such as Mo and U, which accumulate under low oxygen conditions on the seafloor. Previous studies have used sediment Mo and U contents as an archive of changing oxygen concentrations in coastal waters. Here we show that in fjords the use of Mo and U for this purpose may be impaired by additional processes. Our findings have implications for the reliable use of Mo and U to reconstruct oxygen changes in fjords.
Hannah Sharpe, Michel Gosselin, Catherine Lalande, Alexandre Normandeau, Jean-Carlos Montero-Serrano, Khouloud Baccara, Daniel Bourgault, Owen Sherwood, and Audrey Limoges
Biogeosciences, 20, 4981–5001, https://doi.org/10.5194/bg-20-4981-2023, https://doi.org/10.5194/bg-20-4981-2023, 2023
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We studied the impact of submarine canyon processes within the Pointe-des-Monts system on biogenic matter export and phytoplankton assemblages. Using data from three oceanographic moorings, we show that the canyon experienced two low-amplitude sediment remobilization events in 2020–2021 that led to enhanced particle fluxes in the deep-water column layer > 2.6 km offshore. Sinking phytoplankton fluxes were lower near the canyon compared to background values from the lower St. Lawrence Estuary.
Dewi Langlet, Florian Mermillod-Blondin, Noémie Deldicq, Arthur Bauville, Gwendoline Duong, Lara Konecny, Mylène Hugoni, Lionel Denis, and Vincent M. P. Bouchet
Biogeosciences, 20, 4875–4891, https://doi.org/10.5194/bg-20-4875-2023, https://doi.org/10.5194/bg-20-4875-2023, 2023
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Benthic foraminifera are single-cell marine organisms which can move in the sediment column. They were previously reported to horizontally and vertically transport sediment particles, yet the impact of their motion on the dissolved fluxes remains unknown. Using microprofiling, we show here that foraminiferal burrow formation increases the oxygen penetration depth in the sediment, leading to a change in the structure of the prokaryotic community.
Masahiko Fujii, Ryuji Hamanoue, Lawrence Patrick Cases Bernardo, Tsuneo Ono, Akihiro Dazai, Shigeyuki Oomoto, Masahide Wakita, and Takehiro Tanaka
Biogeosciences, 20, 4527–4549, https://doi.org/10.5194/bg-20-4527-2023, https://doi.org/10.5194/bg-20-4527-2023, 2023
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This is the first study of the current and future impacts of climate change on Pacific oyster farming in Japan. Future coastal warming and acidification may affect oyster larvae as a result of longer exposure to lower-pH waters. A prolonged spawning period may harm oyster processing by shortening the shipping period and reducing oyster quality. To minimize impacts on Pacific oyster farming, in addition to mitigation measures, local adaptation measures may be required.
Taketoshi Kodama, Atsushi Nishimoto, Ken-ichi Nakamura, Misato Nakae, Naoki Iguchi, Yosuke Igeta, and Yoichi Kogure
Biogeosciences, 20, 3667–3682, https://doi.org/10.5194/bg-20-3667-2023, https://doi.org/10.5194/bg-20-3667-2023, 2023
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Carbon and nitrogen are essential elements for organisms; their stable isotope ratios (13C : 12C, 15N : 14N) are useful tools for understanding turnover and movement in the ocean. In the Sea of Japan, the environment is rapidly being altered by human activities. The 13C : 12C of small organic particles is increased by active carbon fixation, and phytoplankton growth increases the values. The 15N : 14N variations suggest that nitrates from many sources contribute to organic production.
Aubin Thibault de Chanvalon, George W. Luther, Emily R. Estes, Jennifer Necker, Bradley M. Tebo, Jianzhong Su, and Wei-Jun Cai
Biogeosciences, 20, 3053–3071, https://doi.org/10.5194/bg-20-3053-2023, https://doi.org/10.5194/bg-20-3053-2023, 2023
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The intensity of the oceanic trap of CO2 released by anthropogenic activities depends on the alkalinity brought by continental weathering. Between ocean and continent, coastal water and estuaries can limit or favour the alkalinity transfer. This study investigate new interactions between dissolved metals and alkalinity in the oxygen-depleted zone of estuaries.
Joonas J. Virtasalo, Peter Österholm, and Eero Asmala
Biogeosciences, 20, 2883–2901, https://doi.org/10.5194/bg-20-2883-2023, https://doi.org/10.5194/bg-20-2883-2023, 2023
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We mixed acidic metal-rich river water from acid sulfate soils and seawater in the laboratory to study the flocculation of dissolved metals and organic matter in estuaries. Al and Fe flocculated already at a salinity of 0–2 to large organic flocs (>80 µm size). Precipitation of Al and Fe hydroxide flocculi (median size 11 µm) began when pH exceeded ca. 5.5. Mn transferred weakly to Mn hydroxides and Co to the flocs. Up to 50 % of Cu was associated with the flocs, irrespective of seawater mixing.
Moritz Baumann, Allanah Joy Paul, Jan Taucher, Lennart Thomas Bach, Silvan Goldenberg, Paul Stange, Fabrizio Minutolo, and Ulf Riebesell
Biogeosciences, 20, 2595–2612, https://doi.org/10.5194/bg-20-2595-2023, https://doi.org/10.5194/bg-20-2595-2023, 2023
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The sinking velocity of marine particles affects how much atmospheric CO2 is stored inside our oceans. We measured particle sinking velocities in the Peruvian upwelling system and assessed their physical and biochemical drivers. We found that sinking velocity was mainly influenced by particle size and porosity, while ballasting minerals played only a minor role. Our findings help us to better understand the particle sinking dynamics in this highly productive marine system.
Kyle E. Hinson, Marjorie A. M. Friedrichs, Raymond G. Najjar, Maria Herrmann, Zihao Bian, Gopal Bhatt, Pierre St-Laurent, Hanqin Tian, and Gary Shenk
Biogeosciences, 20, 1937–1961, https://doi.org/10.5194/bg-20-1937-2023, https://doi.org/10.5194/bg-20-1937-2023, 2023
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Climate impacts are essential for environmental managers to consider when implementing nutrient reduction plans designed to reduce hypoxia. This work highlights relative sources of uncertainty in modeling regional climate impacts on the Chesapeake Bay watershed and consequent declines in bay oxygen levels. The results demonstrate that planned water quality improvement goals are capable of reducing hypoxia levels by half, offsetting climate-driven impacts on terrestrial runoff.
Linquan Mu, Jaime B. Palter, and Hongjie Wang
Biogeosciences, 20, 1963–1977, https://doi.org/10.5194/bg-20-1963-2023, https://doi.org/10.5194/bg-20-1963-2023, 2023
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Enhancing ocean alkalinity accelerates carbon dioxide removal from the atmosphere. We hypothetically added alkalinity to the Amazon River and examined the increment of the carbon uptake by the Amazon plume. We also investigated the minimum alkalinity addition in which this perturbation at the river mouth could be detected above the natural variability.
Karl M. Attard, Anna Lyssenko, and Iván F. Rodil
Biogeosciences, 20, 1713–1724, https://doi.org/10.5194/bg-20-1713-2023, https://doi.org/10.5194/bg-20-1713-2023, 2023
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Aquatic plants produce a large amount of organic matter through photosynthesis that, following erosion, is deposited on the seafloor. In this study, we show that plant detritus can trigger low-oxygen conditions (hypoxia) in shallow coastal waters, making conditions challenging for most marine animals. We propose that the occurrence of hypoxia may be underestimated because measurements typically do not consider the region closest to the seafloor, where detritus accumulates.
M. James McLaughlin, Cindy Bessey, Gary A. Kendrick, John Keesing, and Ylva S. Olsen
Biogeosciences, 20, 1011–1026, https://doi.org/10.5194/bg-20-1011-2023, https://doi.org/10.5194/bg-20-1011-2023, 2023
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Coral reefs face increasing pressures from environmental change at present. The coral reef framework is produced by corals and calcifying algae. The Kimberley region of Western Australia has escaped land-based anthropogenic impacts. Specimens of the dominant coral and algae were collected from Browse Island's reef platform and incubated in mesocosms to measure calcification and production patterns of oxygen. This study provides important data on reef building and climate-driven effects.
Patricia Ayón Dejo, Elda Luz Pinedo Arteaga, Anna Schukat, Jan Taucher, Rainer Kiko, Helena Hauss, Sabrina Dorschner, Wilhelm Hagen, Mariona Segura-Noguera, and Silke Lischka
Biogeosciences, 20, 945–969, https://doi.org/10.5194/bg-20-945-2023, https://doi.org/10.5194/bg-20-945-2023, 2023
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Ocean upwelling regions are highly productive. With ocean warming, severe changes in upwelling frequency and/or intensity and expansion of accompanying oxygen minimum zones are projected. In a field experiment off Peru, we investigated how different upwelling intensities affect the pelagic food web and found failed reproduction of dominant zooplankton. The changes projected could severely impact the reproductive success of zooplankton communities and the pelagic food web in upwelling regions.
Cited articles
Abril, G., Nogueira, M., Etcheber, H., Cabeçadas, G., Lemaire, E., and
Brogueira, M.: Behaviour of organic carbon in nine contrasting European
estuaries, Estuar. Coast. Shelf Sci., 54, 241–262, 2002.
Amann, T., Weiss, A., and Hartmann, J.: Carbon dynamics in the freshwater
part of the Elbe estuary, Germany: Implications of improving water quality,
Estuar. Coast. Shelf Sci., 107, 112–121, 2012.
Backhaus, J. O.: A three-dimensional model for the simulation of shelf sea
dynamics, Deutsche Hydrografische Zeitschrift, 38, 165–187, 1985.
Backhaus, J. O. and Hainbucher, D.: A finite difference general circulation
model for shelf seas and its application to low frequency variability on the
North European Shelf, in: Elsevier oceanography series, Elsevier, 221–244, https://doi.org/10.1016/S0422-9894(08)70450-1,
1987.
Borges, A., Schiettecatte, L.-S., Abril, G., Delille, B., and Gazeau, F.:
Carbon dioxide in European coastal waters, Estuar. Coast. Shelf
Sci., 70, 375–387, 2006.
Borges, A. V. and Gypens, N.: Carbonate chemistry in the coastal zone
responds more strongly to eutrophication than ocean acidification, Limnol. Oceanogr., 55, 346–353, 2010.
Breitburg, D.: Effects of hypoxia, and the balance between hypoxia and
enrichment, on coastal fishes and fisheries, Estuaries, 25, 767–781, 2002.
Breitburg, D. L., Craig, J. K., Fulford, R. S., Rose, K. A., Boynton, W. R.,
Brady, D. C., Ciotti, B. J., Diaz, R., Friedland, K., and Hagy, J.: Nutrient
enrichment and fisheries exploitation: interactive effects on estuarine
living resources and their management, Hydrobiologia, 629, 31–47, 2009.
Brewer, P. G. and Goldman, J. C.: Alkalinity changes generated by
phytoplankton growth 1, Limnol. Oceanogr., 21, 108–117, 1976.
Burt, W., Thomas, H., Pätsch, J., Omar, A., Schrum, C., Daewel, U.,
Brenner, H., and de Baar, H.: Radium isotopes as a tracer of sediment-water
column exchange in the North Sea, Global Biogeochem. Cy., 28, 786–804,
2014.
Burt, W., Thomas, H., Hagens, M., Pätsch, J., Clargo, N., Salt, L.,
Winde, V., and Böttcher, M.: Carbon sources in the North Sea evaluated
by means of radium and stable carbon isotope tracers, Limnol.
Oceanogr., 61, 666–683, 2016.
Cai, W. J. and Wang, Y.: The chemistry, fluxes, and sources of carbon
dioxide in the estuarine waters of the Satilla and Altamaha Rivers, Georgia,
Limnol. Oceanogr., 43, 657–668, 1998.
Casciotti, K. L., Sigman, D. M., Hastings, M. G., Böhlke, J., and
Hilkert, A.: Measurement of the oxygen isotopic composition of nitrate in
seawater and freshwater using the denitrifier method, Anal. Chem.,
74, 4905–4912, 2002.
Chen, C. T. A. and Wang, S. L.: Carbon, alkalinity and nutrient budgets on
the East China Sea continental shelf, J. Geophys. Res.-Ocean., 104, 20675–20686, 1999.
Cysewski, M., Seemann, J., and Horstmann, J.: Artifacts or Nature? Data
Processing and Interpretation of 3D Current Fields Recorded with Vessel
Mounted Acoustic Doppler Current Profiler in Different Regions and
Conditions, 2018 OCEANS-MTS/IEEE Kobe Techno-Oceans (OTO), IEEE, 1–5, https://doi.org/10.1109/OCEANSKOBE.2018.8559215, 2018.
Dähnke, K., Bahlmann, E., and Emeis, K.: A nitrate sink in estuaries? An
assessment by means of stable nitrate isotopes in the Elbe estuary,
Limnol. Oceanogr., 53, 1504–1511, 2008.
De Jonge, V. N., Boynton, W., D'Elia, C. F., Elmgren, R., and Welsh, R.:
Responses to developments in eutrophication in four different North Atlantic
estuarine systems, in: ECSA22/ERF Symposium, edited by: Dyer, K. R. and Orth, R. J., Changes in fluxes in estuaries: implications from science to management, Olsen & Olsen, Fredensborg, Denmark, 179–196, 1994.
Dlugokencky, E. and Tans, P.: Trends in atmospheric carbon dioxide, National Oceanic and Atmospheric Administration,
Global Monitoring Laboratory (NOAA/GLM), available at: https://gml.noaa.gov/ccgg/trends/gl_data.html, last access: 3 March 2021.
DWD (Deutscher Wetter Dienst): Climate Data Center (CDC), https://www.dwd.de/DE/klimaumwelt/cdc/cdc_node.html, last access: 19 November 2020.
FGG (Flussgebietsgemeinschaft): Elbe, https://www.elbe-datenportal.de/FisFggElbe/content/auswertung/UntersuchungsbereichHydro_start_x.action, last access: 4 November 2021.
Francescangeli, F., Milker, Y., Bunzel, D., Thomas, H., Norbisrath, M.,
Schönfeld, J., and Schmiedl, G.: Recent benthic foraminiferal
distribution in the Elbe Estuary (North Sea, Germany): A response to
environmental stressors, Estuar. Coast. Shelf Sci., 251, 107198, https://doi.org/10.1016/j.ecss.2021.107198,
2021.
Frankignoulle, M., Bourge, I., and Wollast, R.: Atmospheric CO2 fluxes in a
highly polluted estuary (the Scheldt), Limnol. Oceanogr., 41,
365–369, 1996.
Frankignoulle, M., Abril, G., Borges, A., Bourge, I., Canon, C., Delille,
B., Libert, E., and Théate, J.-M.: Carbon dioxide emission from European
estuaries, Science, 282, 434–436, 1998.
Gaye, B., Lahajnar, N., Harms, N., Paul, S. A. L., Rixen, T., and Emeis, K.-C.: What can we learn from amino acids about oceanic organic matter cycling and degradation?, Biogeosciences, 19, 807–830, https://doi.org/10.5194/bg-19-807-2022, 2022.
Gilbert, D., Sundby, B., Gobeil, C., Mucci, A., and Tremblay, G. H.: A
seventy-two-year record of diminishing deep-water oxygen in the St. Lawrence
estuary: The northwest Atlantic connection, Limnol. Oceanogr., 50,
1654–1666, 2005.
Granger, J. and Sigman, D. M.: Removal of nitrite with sulfamic acid for
nitrate N and O isotope analysis with the denitrifier method, Rapid
Communications in Mass Spectrometry: An International Journal Devoted to the
Rapid Dissemination of Up-to-the-Minute Research in Mass Spectrometry, Rapid Commun. Mass Sp., 23,
3753–3762, https://doi.org/10.1002/rcm.4307, 2009.
Große, F., Greenwood, N., Kreus, M., Lenhart, H.-J., Machoczek, D., Pätsch, J., Salt, L., and Thomas, H.: Looking beyond stratification: a model-based analysis of the biological drivers of oxygen deficiency in the North Sea, Biogeosciences, 13, 2511–2535, https://doi.org/10.5194/bg-13-2511-2016, 2016.
Große, F., Kreus, M., Lenhart, H.-J., Pätsch, J., and Pohlmann, T.:
A novel modeling approach to quantify the influence of nitrogen inputs on
the oxygen dynamics of the North Sea, Front. Mar. Sci., 4, 383, https://doi.org/10.3389/fmars.2017.00383,
2017.
Hansen, H. and Koroleff, F.: Determination of nutrients. Methods of
Seawater Analysis: Third, Completely Revised and Extended Edition, Weinheim,
Germany, Wiley-VCH Verlag,
ISBN 3-527-29589-5, 2007.
Hardenbicker, P., Weitere, M., Ritz, S., Schöll, F., and Fischer, H.:
Longitudinal plankton dynamics in the rivers Rhine and Elbe, River Res. Appl., 32, 1264–1278, 2016.
Hersbach, H., Bell, B., Berrisford, P., Hirahara, S., Horányi, A.,
Muñoz-Sabater, J., Nicolas, J., Peubey, C., Radu, R., and Schepers, D.:
The ERA5 global reanalysis, Q. J. Roy. Meteorol.
Soc., 146, 1999–2049, 2020.
Howarth, R., Chan, F., Conley, D. J., Garnier, J., Doney, S. C., Marino, R.,
and Billen, G.: Coupled biogeochemical cycles: eutrophication and hypoxia in
temperate estuaries and coastal marine ecosystems, Front. Ecol.
Environ., 9, 18–26, 2011.
Howarth, R. W., Billen, G., Swaney, D., Townsend, A., Jaworski, N., Lajtha,
K., Downing, J. A., Elmgren, R., Caraco, N., and Jordan, T.: Regional
nitrogen budgets and riverine N & P fluxes for the drainages to the North
Atlantic Ocean: Natural and human influences, in: Nitrogen cycling in the
North Atlantic Ocean and its watersheds, Springer, 75–139, https://doi.org/10.1007/978-94-009-1776-7_3, 1996.
Hu, X. and Cai, W. J.: An assessment of ocean margin anaerobic processes on
oceanic alkalinity budget, Global Biogeochem. Cy., 25, https://doi.org/10.1029/2010GB003859, 2011.
Janas, U. and Szaniawska, A.: The influence of hydrogen sulphide on
macrofaunal biodiversity in the Gulf of Gdansk, Oceanologia, 38, 127–142,
1996.
Kempe, S. T. E. P. H. A. N.: Valdivia cruise, October 1981: carbonate equilibria in the estuaries of Elbe, Weser, Ems and in the Southern German Bight, Transport of Carbon and Minerals in Major World Rivers, 1, 719–742, 1982.
Kendall, C., Elliott, E. M., and Wankel, S. D.: Tracing anthropogenic inputs
of nitrogen to ecosystems, Stable isotopes in ecology and environmental
science, Wiley, 2, 375–449, https://doi.org/10.1002/9780470691854.ch12, 2007.
Kerner, M.: Effects of deepening the Elbe Estuary on sediment regime and
water quality, Estuar. Coast. Shelf Sci., 75, 492–500, 2007.
Kérouel, R. and Aminot, A.: Fluorometric determination of ammonia in
sea and estuarine waters by direct segmented flow analysis, Mar.
Chem., 57, 265–275, 1997.
Léonard, J., Mietton, M., Najib, H., and Gourbesville, P.: Rating curve
modelling with Manning's equation to manage instability and improve
extrapolation, Hydrol. Sci. J., 45, 739–750, 2000.
Lewis, E. and Wallace, D.: Program Developed for CO2 System Calculations, CDIAC, ESS-DIVE repository, https://doi.org/10.15485/1464255 accessed via https://data.ess-dive.lbl.gov/datasets/doi:10.15485/1464255,
1998.
Lorkowski, I., Pätsch, J., Moll, A., and Kühn, W.: Interannual
variability of carbon fluxes in the North Sea from 1970 to 2006 – Competing
effects of abiotic and biotic drivers on the gas-exchange of CO2, Estuar.
Coast. Shelf Sci., 100, 38–57, 2012.
Middelburg, J. and Nieuwenhuize, J.: Nitrogen isotope tracing of dissolved
inorganic nitrogen behaviour in tidal estuaries, Estuar. Coast.
Shelf Sci., 53, 385–391, 2001.
Millero, F. J.: The thermodynamics of the carbonate system in seawater,
Geochim. Cosmochim. Ac., 43, 1651–1661, 1979.
Mucci, A., Starr, M., Gilbert, D., and Sundby, B.: Acidification of lower
St. Lawrence Estuary bottom waters, Atmos.-Ocean, 49, 206–218, 2011.
Nixon, S. W.: Coastal marine eutrophication: a definition, social causes,
and future concerns, Ophelia, 41, 199–219, 1995.
Pätsch, J. and Kühn, W.: Nitrogen and carbon cycling in the North
Sea and exchange with the North Atlantic – a model study – Part I: Nitrogen
budget and fluxes, Cont. Shelf Res., 28, 767–787, 2008.
Pätsch, J. and Lenhart, H.: Daily Loads of Nutrients, Total Alkalinity,
Dissolved Inorganic Carbon and Dissolved Organic Carbon of the European
Continental Rivers for the Years 1977–2017, DATA RIVER, Universität
Hamburg, Institut für Meereskunde, Universität Hamburg,
https://wiki.cen.uni-hamburg.de/ifm/ECOHAM/DATA_RIVER (last access: 4 November 2021),
2019.
Pein, J., Eisele, A., Sanders, T., Daewel, U., Stanev, E. V., Van Beusekom,
J. E., Staneva, J., and Schrum, C.: Seasonal Stratification and
Biogeochemical Turnover in the Freshwater Reach of a Partially Mixed Dredged
Estuary, Front. Mar. Sci., 8, 623714, https://doi.org/10.3389/fmars.2021.623714, 2021.
Petersen, W., Schroeder, F., and Bockelmann, F.-D.: FerryBox-Application of
continuous water quality observations along transects in the North Sea,
Ocean Dynam., 61, 1541–1554, 2011.
Pohlmann, T.: Predicting the thermocline in a circulation model of the North
Sea – Part I: model description, calibration and verification, Cont.
Shelf Res., 16, 131–146, 1996.
Rabalais, N. N., Turner, R. E., and Wiseman Jr, W. J.: Hypoxia in the Gulf
of Mexico, J. Environ. Qual., 30, 320–329, 2001.
Rabalais, N. N., Turner, R. E., and Wiseman Jr, W. J.: Gulf of Mexico
hypoxia, aka “The dead zone”, Annu. Rev. Ecol. Syst., 33,
235–263, https://doi.org/10.1146/annurev.ecolsys.33.010802.150513, 2002.
Sanders, T., Schöl, A., and Dähnke, K.: Hot spots of nitrification
in the Elbe estuary and their impact on nitrate regeneration, Estuar.
Coast., 41, 128–138, 2018.
Schöl, A., Hein, B., Wyrwa, J., and Kirchesch, V.: Modelling water quality in the Elbe and its estuary–Large Scale and Long Term Applications with Focus on the Oxygen Budget of the Estuary, Die Küste, 81 Modelling, 203–232, 2014.
Schwichtenberg, F., Pätsch, J., Böttcher, M. E., Thomas, H., Winde, V., and Emeis, K.-C.: The impact of intertidal areas on the carbonate system of the southern North Sea, Biogeosciences, 17, 4223–4245, https://doi.org/10.5194/bg-17-4223-2020, 2020.
Seitzinger, S. P.: Denitrification in freshwater and coastal marine
ecosystems: ecological and geochemical significance, Limnol.
Oceanogr., 33, 702–724, 1988.
Shadwick, E., Thomas, H., Gratton, Y., Leong, D., Moore, S., Papakyriakou,
T., and Prowe, A.: Export of Pacific carbon through the Arctic Archipelago
to the North Atlantic, Cont. Shelf Res., 31, 806–816, 2011.
Sigman, D. M., Casciotti, K. L., Andreani, M., Barford, C., Galanter, M.,
and Böhlke, J.: A bacterial method for the nitrogen isotopic analysis of
nitrate in seawater and freshwater, Anal. Chem., 73, 4145–4153,
2001.
Smith, S. and Hollibaugh, J.: Coastal metabolism and the oceanic organic
carbon balance, Rev. Geophys., 31, 75–89, 1993.
Spieckermann, M., Gröngröft, A., Karrasch, M., Neumann, A., and
Eschenbach, A.: Oxygen Consumption of Resuspended Sediments of the Upper
Elbe Estuary: Process Identification and Prognosis, Aquat. Geochem., 28,
1–25, https://doi.org/10.1007/s10498-021-09401-6, 2021.
Thomas, H.: Remineralization ratios of carbon, nutrients, and oxygen in the
North Atlantic Ocean: A field databased assessment, Global Biogeochem.
Cy., 16, 24-21–24-12, 2002.
Thomas, H., Bozec, Y., Elkalay, K., and De Baar, H. J.: Enhanced open ocean
storage of CO2 from shelf sea pumping, Science, 304, 1005–1008, 2004.
Thomas, H., Schiettecatte, L.-S., Suykens, K., Koné, Y. J. M., Shadwick, E. H., Prowe, A. E. F., Bozec, Y., de Baar, H. J. W., and Borges, A. V.: Enhanced ocean carbon storage from anaerobic alkalinity generation in coastal sediments, Biogeosciences, 6, 267–274, https://doi.org/10.5194/bg-6-267-2009, 2009.
Van Beusekom, J. E., Carstensen, J., Dolch, T., Grage, A., Hofmeister, R.,
Lenhart, H., Kerimoglu, O., Kolbe, K., Pätsch, J., and Rick, J.: Wadden
Sea Eutrophication: long-term trends and regional differences, Front.
Mar. Sci., 370, https://doi.org/10.3389/fmars.2019.00370, 2019.
Wanninkhof, R.: Relationship between wind speed and gas exchange over the
ocean revisited, Limnol. Oceanogr.-Method., 12, 351–362, 2014.
Watson, A. J., Schuster, U., Bakker, D. C., Bates, N. R., Corbière, A.,
González-Dávila, M., Friedrich, T., Hauck, J., Heinze, C., and
Johannessen, T.: Tracking the variable North Atlantic sink for atmospheric
CO2, Science, 326, 1391–1393, 2009.
Wolf-Gladrow, D. A., Zeebe, R. E., Klaas, C., Körtzinger, A., and
Dickson, A. G.: Total alkalinity: The explicit conservative expression and
its application to biogeochemical processes, Mar. Chem., 106, 287–300,
2007.
Wu, R. S.: Effects of hypoxia on fish reproduction and development, in: Fish
physiology, Elsevier, Academic Press,
Vol. 27,
https://doi.org/10.1016/S1546-5098(08)00003-4, 2009.
Short summary
Total alkalinity (TA) regulates the oceanic storage capacity of atmospheric CO2. TA is also metabolically generated in estuaries and influences coastal carbon storage through its inflows. We used water samples and identified the Hamburg port area as the one with highest TA generation. Of the overall riverine TA load, 14 % is generated within the estuary. Using a biogeochemical model, we estimated potential effects on the coastal carbon storage under possible anthropogenic and climate changes.
Total alkalinity (TA) regulates the oceanic storage capacity of atmospheric CO2. TA is also...
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