Articles | Volume 12, issue 21
https://doi.org/10.5194/bg-12-6443-2015
© Author(s) 2015. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
https://doi.org/10.5194/bg-12-6443-2015
© Author(s) 2015. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
Research article
| 
11 Nov 2015
Research article |
| 11 Nov 2015
Speciation and distribution of P associated with Fe and Al oxides in aggregate-sized fraction of an arable soil
X. Jiang
CORRESPONDING AUTHOR
Institute of Bio- and Geosciences, Agrosphere Institute (IBG-3), Jülich, Germany
Institute of Bio- and Geosciences, Agrosphere Institute (IBG-3), Jülich, Germany
S. Willbold
Central Institute for Engineering, Electronics and Analytics, Analytics (ZEA-3), Forschungszentrum Jülich GmbH, Wilhelm Johnen Straße, 52425 Jülich, Germany
H. Vereecken
Institute of Bio- and Geosciences, Agrosphere Institute (IBG-3), Jülich, Germany
E. Klumpp
Institute of Bio- and Geosciences, Agrosphere Institute (IBG-3), Jülich, Germany
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Jannis Groh, Jan Vanderborght, Thomas Pütz, Hans-Jörg Vogel, Ralf Gründling, Holger Rupp, Mehdi Rahmati, Michael Sommer, Harry Vereecken, and Horst H. Gerke
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Michael Paul Stockinger, Heye Reemt Bogena, Andreas Lücke, Christine Stumpp, and Harry Vereecken
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Anne Klosterhalfen, Alexander Graf, Nicolas Brüggemann, Clemens Drüe, Odilia Esser, María P. González-Dugo, Günther Heinemann, Cor M. J. Jacobs, Matthias Mauder, Arnold F. Moene, Patrizia Ney, Thomas Pütz, Corinna Rebmann, Mario Ramos Rodríguez, Todd M. Scanlon, Marius Schmidt, Rainer Steinbrecher, Christoph K. Thomas, Veronika Valler, Matthias J. Zeeman, and Harry Vereecken
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Earth Syst. Sci. Data, 10, 1237–1263, https://doi.org/10.5194/essd-10-1237-2018, https://doi.org/10.5194/essd-10-1237-2018, 2018
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Roland Baatz, Pamela L. Sullivan, Li Li, Samantha R. Weintraub, Henry W. Loescher, Michael Mirtl, Peter M. Groffman, Diana H. Wall, Michael Young, Tim White, Hang Wen, Steffen Zacharias, Ingolf Kühn, Jianwu Tang, Jérôme Gaillardet, Isabelle Braud, Alejandro N. Flores, Praveen Kumar, Henry Lin, Teamrat Ghezzehei, Julia Jones, Henry L. Gholz, Harry Vereecken, and Kris Van Looy
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Gaochao Cai, Jan Vanderborght, Matthias Langensiepen, Andrea Schnepf, Hubert Hüging, and Harry Vereecken
Hydrol. Earth Syst. Sci., 22, 2449–2470, https://doi.org/10.5194/hess-22-2449-2018, https://doi.org/10.5194/hess-22-2449-2018, 2018
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Different crop growths had consequences for the parameterization of root water uptake models. The root hydraulic parameters of the Couvreur model but not the water stress parameters of the Feddes–Jarvis model could be constrained by the field data measured from rhizotron facilities. The simulated differences in transpiration from the two soils and the different water treatments could be confirmed by sap flow measurements. The Couvreur model predicted the ratios of transpiration fluxes better.
Xiao Han, Cong Xu, Jennifer A. J. Dungait, Roland Bol, Xiaojie Wang, Wenliang Wu, and Fanqiao Meng
Biogeosciences, 15, 1933–1946, https://doi.org/10.5194/bg-15-1933-2018, https://doi.org/10.5194/bg-15-1933-2018, 2018
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Straw incorporation increases soil organic carbon (SOC) stocks and crop yields in experimental trials across China, regardless of the climate or land use. This conclusion is based on a wide range of soils and climate conditions and suggests that farmers across the world may use this simple management tool to increase their outputs by improving the quality of their outputs by improving the quality of their soil, while mitigating climate change.
Hanna Post, Harrie-Jan Hendricks Franssen, Xujun Han, Roland Baatz, Carsten Montzka, Marius Schmidt, and Harry Vereecken
Biogeosciences, 15, 187–208, https://doi.org/10.5194/bg-15-187-2018, https://doi.org/10.5194/bg-15-187-2018, 2018
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Estimated values of selected key CLM4.5-BGC parameters obtained with the Markov chain Monte Carlo (MCMC) approach DREAM(zs) strongly altered catchment-scale NEE predictions in comparison to global default parameter values. The effect of perturbed meteorological input data on the uncertainty of the predicted carbon fluxes was notably higher for C3-grass and C3-crop than for coniferous and deciduous forest. A future distinction of different crop types including management is considered essential.
Laura Maritza Cardenas, Roland Bol, Dominika Lewicka-Szczebak, Andrew Stuart Gregory, Graham Peter Matthews, William Richard Whalley, Thomas Henry Misselbrook, David Scholefield, and Reinhard Well
Biogeosciences, 14, 4691–4710, https://doi.org/10.5194/bg-14-4691-2017, https://doi.org/10.5194/bg-14-4691-2017, 2017
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A laboratory incubation was carried out at different soil moisture levels to measure emissions of nitrogen gases and the isotopomers (position of 15N) of nitrous oxide. Flux variability was larger in drier conditions, probably due to nutrient distribution heterogeneity created from soil cracks and consequently nutrient hot spots. Denitrification was the main source of fluxes at higher moisture, but nitrification could have occurred under drier conditions (although moisture was still high).
Hongjuan Zhang, Harrie-Jan Hendricks Franssen, Xujun Han, Jasper A. Vrugt, and Harry Vereecken
Hydrol. Earth Syst. Sci., 21, 4927–4958, https://doi.org/10.5194/hess-21-4927-2017, https://doi.org/10.5194/hess-21-4927-2017, 2017
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Applications of data assimilation (DA) arise in many fields of geosciences, perhaps most importantly in weather forecasting and hydrology. We want to investigate the roles of data assimilation methods and land surface models (LSMs) in joint estimation of states and parameters in the assimilation experiments. We find that all DA methods can improve prediction of states, and that differences between DA methods were limited but that the differences between LSMs were much larger.
Carsten Montzka, Michael Herbst, Lutz Weihermüller, Anne Verhoef, and Harry Vereecken
Earth Syst. Sci. Data, 9, 529–543, https://doi.org/10.5194/essd-9-529-2017, https://doi.org/10.5194/essd-9-529-2017, 2017
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Global climate models require adequate parameterization of soil hydraulic properties, but typical resampling to the model grid introduces uncertainties. Here we present a method to scale hydraulic parameters to individual model grids and provide a global data set that overcomes the problems. It preserves the information of sub-grid variability of the water retention curve by deriving local scaling parameters that enables modellers to perturb hydraulic parameters for model ensemble generation.
Roland Baatz, Harrie-Jan Hendricks Franssen, Xujun Han, Tim Hoar, Heye Reemt Bogena, and Harry Vereecken
Hydrol. Earth Syst. Sci., 21, 2509–2530, https://doi.org/10.5194/hess-21-2509-2017, https://doi.org/10.5194/hess-21-2509-2017, 2017
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Soil moisture is a major variable that affects regional climate, weather and hydrologic processes on the Earth's surface. In this study, real-world data of a network of cosmic-ray sensors were assimilated into a regional land surface model to improve model states and soil hydraulic parameters. The results show the potential of these networks for improving model states and parameters. It is suggested to widen the number of observed variables and to increase the number of estimated parameters.
Xiaoqian Jiang, Roland Bol, Barbara J. Cade-Menun, Volker Nischwitz, Sabine Willbold, Sara L. Bauke, Harry Vereecken, Wulf Amelung, and Erwin Klumpp
Biogeosciences, 14, 1153–1164, https://doi.org/10.5194/bg-14-1153-2017, https://doi.org/10.5194/bg-14-1153-2017, 2017
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It is the first study to distinguish the species of nano-sized (d=1−20 nm), small-sized (d=20−450 nm) colloidal P, and dissolved P (d<1 nm) of hydromorphic surface grassland soils from Cambisol, Stagnic Cambisol to Stagnosol using FFF and 31P-NMR. Evidence of nano-sized associations of OC–Fe(Al)–PO43/pyrophosphate in Stagnosol. Stagnic properties affect P speciation and availability by releasing dissolved inorganic and ester-bound P forms as well as nano-sized organic matter–Fe/Al–P colloids.
Bernd Schalge, Jehan Rihani, Gabriele Baroni, Daniel Erdal, Gernot Geppert, Vincent Haefliger, Barbara Haese, Pablo Saavedra, Insa Neuweiler, Harrie-Jan Hendricks Franssen, Felix Ament, Sabine Attinger, Olaf A. Cirpka, Stefan Kollet, Harald Kunstmann, Harry Vereecken, and Clemens Simmer
Hydrol. Earth Syst. Sci. Discuss., https://doi.org/10.5194/hess-2016-557, https://doi.org/10.5194/hess-2016-557, 2016
Manuscript not accepted for further review
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In this work we show how we used a coupled atmosphere-land surface-subsurface model at highest possible resolution to create a testbed for data assimilation. The model was able to capture all important processes and interactions between the compartments as well as showing realistic statistical behavior. This proves that using a model as a virtual truth is possible and it will enable us to develop data assimilation methods where states and parameters are updated across compartment.
Wei Qu, Heye R. Bogena, Johan A. Huisman, Marius Schmidt, Ralf Kunkel, Ansgar Weuthen, Henning Schiedung, Bernd Schilling, Jürgen Sorg, and Harry Vereecken
Earth Syst. Sci. Data, 8, 517–529, https://doi.org/10.5194/essd-8-517-2016, https://doi.org/10.5194/essd-8-517-2016, 2016
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The Rollesbroich catchment is a hydrological observatory of the TERENO (Terrestrial Environmental Observatories) initiative. Hydrometeorological data and spatiotemporal variations in soil water content are measured at high temporal resolution and can be used for many purposes, e.g. validation of remote sensing retrievals, improving hydrological understanding, optimizing data assimilation and inverse modelling techniques. The data set is freely available online (http://www.tereno.net).
Wolfgang Kurtz, Guowei He, Stefan J. Kollet, Reed M. Maxwell, Harry Vereecken, and Harrie-Jan Hendricks Franssen
Geosci. Model Dev., 9, 1341–1360, https://doi.org/10.5194/gmd-9-1341-2016, https://doi.org/10.5194/gmd-9-1341-2016, 2016
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This paper describes the development of a modular data assimilation (DA) system for the integrated Earth system model TerrSysMP with the help of the PDAF data assimilation library.
Currently, pressure and soil moisture data can be used to update model states and parameters in the subsurface compartment of TerrSysMP.
Results from an idealized twin experiment show that the developed DA system provides a good parallel performance and is also applicable for high-resolution modelling problems.
Y. Rothfuss, S. Merz, J. Vanderborght, N. Hermes, A. Weuthen, A. Pohlmeier, H. Vereecken, and N. Brüggemann
Hydrol. Earth Syst. Sci., 19, 4067–4080, https://doi.org/10.5194/hess-19-4067-2015, https://doi.org/10.5194/hess-19-4067-2015, 2015
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Profiles of soil water stable isotopes were followed non-destructively and with high precision for a period of 290 days in the laboratory
Rewatering at the end of the experiment led to instantaneous resetting of the isotope profiles, which could be closely followed with the new method
The evaporation depth dynamics was determined from isotope gradients calculation
Uncertainty associated with the determination of isotope kinetic fractionation where highlighted from inverse modeling.
X. Han, X. Li, G. He, P. Kumbhar, C. Montzka, S. Kollet, T. Miyoshi, R. Rosolem, Y. Zhang, H. Vereecken, and H.-J. H. Franssen
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmdd-8-7395-2015, https://doi.org/10.5194/gmdd-8-7395-2015, 2015
Revised manuscript not accepted
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DasPy is a ready to use open source parallel multivariate land data assimilation framework with joint state and parameter estimation using Local Ensemble Transform Kalman Filter. The Community Land Model (4.5) was integrated as model operator. The Community Microwave Emission Modelling platform, COsmic-ray Soil Moisture Interaction Code and the Two-Source Formulation were integrated as observation operators for the multivariate assimilation of soil moisture and soil temperature, respectively.
S. Gebler, H.-J. Hendricks Franssen, T. Pütz, H. Post, M. Schmidt, and H. Vereecken
Hydrol. Earth Syst. Sci., 19, 2145–2161, https://doi.org/10.5194/hess-19-2145-2015, https://doi.org/10.5194/hess-19-2145-2015, 2015
H. Post, H. J. Hendricks Franssen, A. Graf, M. Schmidt, and H. Vereecken
Biogeosciences, 12, 1205–1221, https://doi.org/10.5194/bg-12-1205-2015, https://doi.org/10.5194/bg-12-1205-2015, 2015
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This study introduces an extension of the classical two-tower approach for uncertainty estimation of measured net CO2 fluxes (NEE). Because land surface properties cannot be assumed identical at two eddy covariance towers, a correction for systematic flux differences is proposed to be added to the classical weather filter. With this extension, the overestimation of NEE uncertainty due to systematic flux differences (which are assumed to increase with tower distance) can considerably be reduced.
B. Scharnagl, S. C. Iden, W. Durner, H. Vereecken, and M. Herbst
Hydrol. Earth Syst. Sci. Discuss., https://doi.org/10.5194/hessd-12-2155-2015, https://doi.org/10.5194/hessd-12-2155-2015, 2015
Preprint withdrawn
X. Han, H.-J. H. Franssen, R. Rosolem, R. Jin, X. Li, and H. Vereecken
Hydrol. Earth Syst. Sci., 19, 615–629, https://doi.org/10.5194/hess-19-615-2015, https://doi.org/10.5194/hess-19-615-2015, 2015
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This paper presents the joint assimilation of cosmic-ray neutron counts and land surface temperature with parameter estimation of leaf area index at an irrigated corn field. The results show that the data assimilation can reduce the systematic input errors due to the lack of irrigation data. The estimations of soil moisture, evapotranspiration and leaf area index can be improved in the joint assimilation framework.
W. Kurtz, H.-J. Hendricks Franssen, P. Brunner, and H. Vereecken
Hydrol. Earth Syst. Sci., 17, 3795–3813, https://doi.org/10.5194/hess-17-3795-2013, https://doi.org/10.5194/hess-17-3795-2013, 2013
V. R. N. Pauwels, G. J. M. De Lannoy, H.-J. Hendricks Franssen, and H. Vereecken
Hydrol. Earth Syst. Sci., 17, 3499–3521, https://doi.org/10.5194/hess-17-3499-2013, https://doi.org/10.5194/hess-17-3499-2013, 2013
Related subject area
Biogeochemistry: Soils
Modelling the effect of climate–substrate interactions on soil organic matter decomposition with the Jena Soil Model
Solubility characteristics of soil humic substances as a function of pH: mechanisms and biogeochemical perspectives
Exploring microscale heterogeneity as a driver of biogeochemical transformations and gas transport in peat
Dissolved organic matter fosters core mercury-methylating microbiomes for methylmercury production in paddy soils
A microbially driven and depth-explicit soil organic carbon model constrained by carbon isotopes to reduce parameter equifinality
Earth observation reveals reduced winter wheat growth and the importance of plant available water during drought
Plutonium concentrations link soil organic matter decline to wind erosion in ploughed soils of South Africa
A synthesis of Sphagnum litterbag experiments: initial leaching losses bias decomposition rate estimates
Effect of straw retention and mineral fertilization on P speciation and P-transformation microorganisms in water- extractable colloids of a Vertisol
A new approach to continuous monitoring of carbon use efficiency and biosynthesis in soil microbes from measurement of CO2 and O2
Validating laboratory insights into the drivers of soil rewetting respiration pulses with field measurements
Diverse organic carbon dynamics captured by radiocarbon analysis of distinct compound classes in a grassland soil
Effects of basalt, concrete fines, and steel slag on maize growth and heavy metal accumulation in an enhanced weathering experiment
The effects of land use on soil carbon stocks in the UK
Technical note: A validated correction method to quantify organic and inorganic carbon in soils using Rock-Eval® thermal analysis
Depth Effects of Long-term Organic Residue Application on Soil Organic Carbon Stocks in Central Kenya
Distinct changes in carbon, nitrogen, and phosphorus cycling in the litter layer across two contrasting forest-tundra ecotones
Vegetation patterns associated with nutrient availability and supply in high-elevation tropical Andean ecosystems
Technical note: An open-source, low-cost system for continuous monitoring of low nitrate concentrations in soil and open water
Long-term fertilization increases soil but not plant or microbial N in a Chihuahuan Desert grassland
Factors controlling spatiotemporal variability of soil carbon accumulation and stock estimates in a tidal salt marsh
Moisture and temperature effects on the radiocarbon signature of respired carbon dioxide to assess stability of soil carbon in the Tibetan Plateau
Non-mycorrhizal root-associated fungi increase soil C stocks and stability via diverse mechanisms
Nine years of warming and nitrogen addition in the Tibetan grassland promoted loss of soil organic carbon but did not alter the bulk change in chemical structure
Soil priming effects and involved microbial community along salt gradients
Adjustments to the Rock-Eval® thermal analysis for soil organic and inorganic carbon quantification
Ecosystem-specific patterns and drivers of global reactive iron mineral-associated organic carbon
Dark septate endophytic fungi associated with pioneer grass inhabiting volcanic deposits and their functions in promoting plant growth
Global patterns and drivers of phosphorus fractions in natural soils
Reviews and syntheses: Iron – a driver of nitrogen bioavailability in soils?
How well does ramped thermal oxidation quantify the age distribution of soil carbon? Assessing thermal stability of physically and chemically fractionated soil organic matter
Differential temperature sensitivity of intracellular metabolic processes and extracellular soil enzyme activities
Mapping soil organic carbon fractions for Australia, their stocks, and uncertainty
Technical note: The recovery rate of free particulate organic matter from soil samples is strongly affected by the method of density fractionation
Deforestation for agriculture leads to soil warming and enhanced litter decomposition in subarctic soils
Temperature sensitivity of soil organic carbon respiration along a forested elevation gradient in the Rwenzori Mountains, Uganda
The influence of elevated CO2 and soil depth on rhizosphere activity and nutrient availability in a mature Eucalyptus woodland
The paradox of assessing greenhouse gases from soils for nature-based solutions
Management-induced changes in soil organic carbon on global croplands
Pore network modeling as a new tool for determining gas diffusivity in peat
Temperature sensitivity of dark CO2 fixation in temperate forest soils
Effects of precipitation seasonality, irrigation, vegetation cycle and soil type on enhanced weathering – modeling of cropland case studies across four sites
Stable isotope profiles of soil organic carbon in forested and grassland landscapes in the Lake Alaotra basin (Madagascar): insights in past vegetation changes
Reviews and syntheses: The promise of big diverse soil data, moving current practices towards future potential
Dynamics of rare earth elements and associated major and trace elements during Douglas-fir (Pseudotsuga menziesii) and European beech (Fagus sylvatica L.) litter degradation
To what extent can soil moisture and soil Cu contamination stresses affect nitrous species emissions? Estimation through calibration of a nitrification–denitrification model
Carbon, nitrogen, and phosphorus stoichiometry of organic matter in Swedish forest soils and its relationship with climate, tree species, and soil texture
Soil geochemistry as a driver of soil organic matter composition: insights from a soil chronosequence
Leaching of inorganic and organic phosphorus and nitrogen in contrasting beech forest soils – seasonal patterns and effects of fertilization
Age and chemistry of dissolved organic carbon reveal enhanced leaching of ancient labile carbon at the permafrost thaw zone
Marleen Pallandt, Marion Schrumpf, Holger Lange, Markus Reichstein, Lin Yu, and Bernhard Ahrens
Biogeosciences, 22, 1907–1928, https://doi.org/10.5194/bg-22-1907-2025, https://doi.org/10.5194/bg-22-1907-2025, 2025
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As soils warm due to climate change, soil organic carbon (SOC) decomposes faster due to increased microbial activity, given sufficient available moisture. We modelled the microbial decomposition of plant litter and residue at different depths and found that deep soil layers are more sensitive than topsoils. Warming causes SOC loss, but its extent depends on the litter type and its temperature sensitivity, which can either counteract or amplify losses. Droughts may also counteract warming-induced SOC losses.
Xuemei Yang, Jie Zhang, Khan M. G. Mostofa, Mohammad Mohinuzzaman, H. Henry Teng, Nicola Senesi, Giorgio S. Senesi, Jie Yuan, Yu Liu, Si-Liang Li, Xiaodong Li, Baoli Wang, and Cong-Qiang Liu
Biogeosciences, 22, 1745–1765, https://doi.org/10.5194/bg-22-1745-2025, https://doi.org/10.5194/bg-22-1745-2025, 2025
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The solubility characteristics of soil humic acids (HAs), fulvic acids (FAs), and protein-like substances (PLSs) at varying pH levels remain unclear. The key findings include the following: HA solubility increases with increasing pH and decreases with decreasing pH; HApH6 and HApH1 contribute to 39.1–49.2% and 3.1–24.1% of dissolved organic carbon, respectively; and HApH2, FA, and PLSs are highly soluble at acidic pHs and are transported by ambient water. These issues are crucial for sustainable soil management.
Lukas Kohl, Petri Kiuru, Marjo Palviainen, Maarit Raivonen, Markku Koskinen, Mari Pihlatie, and Annamari Laurén
Biogeosciences, 22, 1711–1727, https://doi.org/10.5194/bg-22-1711-2025, https://doi.org/10.5194/bg-22-1711-2025, 2025
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We present an assay to illuminate heterogeneity in biogeochemical transformations within peat samples. For this, we injected isotope-labeled acetate into peat cores and monitored the release of label-derived gases, which we compared to microtomography images. The fraction of label converted to CO2 and the rapidness of this conversion were linked to injection depth and air-filled porosity.
Qiang Pu, Bo Meng, Jen-How Huang, Kun Zhang, Jiang Liu, Yurong Liu, Mahmoud A. Abdelhafiz, and Xinbin Feng
Biogeosciences, 22, 1543–1556, https://doi.org/10.5194/bg-22-1543-2025, https://doi.org/10.5194/bg-22-1543-2025, 2025
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This study examines the effect of dissolved organic matter (DOM) on microbial mercury (Hg) methylation in paddy soils. It uncovers that DOM regulates Hg methylation mainly through altering core Hg-methylating microbiome composition and boosting the growth of core Hg-methylating microorganisms. The study highlights that in the regulation of methylmercury formation in paddy soils, more attention should be paid to changes in DOM concentration and composition.
Marijn Van de Broek, Gerard Govers, Marion Schrumpf, and Johan Six
Biogeosciences, 22, 1427–1446, https://doi.org/10.5194/bg-22-1427-2025, https://doi.org/10.5194/bg-22-1427-2025, 2025
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Soil organic carbon models are used to predict how soils affect the concentration of CO2 in the atmosphere. We show that equifinality – the phenomenon that different parameter values lead to correct overall model outputs, albeit with a different model behaviour – is an important source of model uncertainty. Our results imply that adding more complexity to soil organic carbon models is unlikely to lead to better predictions as long as more data to constrain model parameters are not available.
Hanna Sjulgård, Lukas Valentin Graf, Tino Colombi, Juliane Hirte, Thomas Keller, and Helge Aasen
Biogeosciences, 22, 1341–1354, https://doi.org/10.5194/bg-22-1341-2025, https://doi.org/10.5194/bg-22-1341-2025, 2025
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Our study showed that stress-related crop response to changing environmental conditions can be detected by monitoring crops using satellite images at the landscape level. This could be useful for farmers to identify when stresses occur. Our results also suggest that satellite imagery can be used to discover soil impacts on crop development at farm fields. The inclusion of soil properties in satellite image analyses could further improve the accuracy of the prediction of drought stress on crops.
Joel Mohren, Hendrik Wiesel, Wulf Amelung, L. Keith Fifield, Alexandra Sandhage-Hofmann, Erik Strub, Steven A. Binnie, Stefan Heinze, Elmarie Kotze, Chris Du Preez, Stephen G. Tims, and Tibor J. Dunai
Biogeosciences, 22, 1077–1094, https://doi.org/10.5194/bg-22-1077-2025, https://doi.org/10.5194/bg-22-1077-2025, 2025
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We measured concentrations of nuclear fallout in soil samples taken from arable land in South Africa. We find that during the second half of the 20th century, the data strongly correlate with the organic matter content of the soils. The finding implies that wind erosion strongly influenced the loss of organic matter in the soils we investigated. Furthermore, the exponential decline of fallout concentrations and organic matter content over time peaks shortly after native grassland is ploughed.
Henning Teickner, Edzer Pebesma, and Klaus-Holger Knorr
Biogeosciences, 22, 417–433, https://doi.org/10.5194/bg-22-417-2025, https://doi.org/10.5194/bg-22-417-2025, 2025
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Decomposition rates for Sphagnum mosses, the main peat-forming plants in northern peatlands, are often derived from litterbag experiments. Here, we estimate initial leaching losses from available Sphagnum litterbag experiments and analyze how decomposition rates are biased when initial leaching losses are ignored. Our analyses indicate that initial leaching losses range between 3 to 18 mass-% and that this may result in overestimated mass losses when extrapolated to several decades.
Shanshan Bai, Yifei Ge, Dongtan Yao, Yifan Wang, Jinfang Tan, Shuai Zhang, Yutao Peng, and Xiaoqian Jiang
Biogeosciences, 22, 135–151, https://doi.org/10.5194/bg-22-135-2025, https://doi.org/10.5194/bg-22-135-2025, 2025
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Mineral fertilization led to increases in total P, available P, high-activity inorganic P fractions, and organic P but reduced the abundance of P-cycling genes by decreasing soil pH and increasing P in bulk soil. Straw retention enhanced organic carbon, total P, and available P concentrations in water-extractable colloids (WECs). Abundances of the phoD gene and phoD-harboring Proteobacteria in WECs were elevated under straw retention, suggesting an increase in P-mineralization capacity.
Kyle E. Smart, Daniel O. Breecker, Christopher B. Blackwood, and Timothy M. Gallagher
Biogeosciences, 22, 87–101, https://doi.org/10.5194/bg-22-87-2025, https://doi.org/10.5194/bg-22-87-2025, 2025
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When microbes consume carbon within soils, it is important to know how much carbon is respired and lost as carbon dioxide versus how much is used to make new biomass. We used a new approach of monitoring carbon dioxide and oxygen to track the fate of consumed carbon during a series of laboratory experiments where sugar was added to moistened soil. Our approach allowed us to estimate how much sugar was converted to dead microbial biomass, which is more likely to be preserved in soils.
Xiankun Li, Marleen Pallandt, Dilip Naidu, Johannes Rousk, Gustaf Hugelius, and Stefano Manzoni
EGUsphere, https://doi.org/10.5194/egusphere-2024-3324, https://doi.org/10.5194/egusphere-2024-3324, 2024
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While laboratory studies have identified many drivers and their effects on the carbon emission pulse after rewetting of dry soils, a validation with field data is still missing. Here, we show that the carbon emission pulse in the laboratory and in the field increases with soil organic carbon and temperature, but their trends with pre-rewetting dryness and moisture increment at rewetting differ. We conclude that the laboratory findings can be partially validated.
Katherine E. Grant, Marisa N. Repasch, Kari M. Finstad, Julia D. Kerr, Maxwell Marple, Christopher J. Larson, Taylor A. B. Broek, Jennifer Pett-Ridge, and Karis J. McFarlane
Biogeosciences, 21, 4395–4411, https://doi.org/10.5194/bg-21-4395-2024, https://doi.org/10.5194/bg-21-4395-2024, 2024
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Soils store organic carbon composed of multiple compounds from plants and microbes for different lengths of time. To understand how soils store these different carbon types, we measure the time each carbon fraction is in a grassland soil profile. Our results show that the length of time each individual soil fraction is in our soil changes. Our approach allows a detailed look at the different components in soils. This study can help improve our understanding of soil dynamics.
Jet Rijnders, Arthur Vienne, and Sara Vicca
EGUsphere, https://doi.org/10.5194/egusphere-2024-3022, https://doi.org/10.5194/egusphere-2024-3022, 2024
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A mesocosm experiment was set-up to investigate how maize responds to basalt, concrete fines and steel slags application, using a dose-response approach. Biomass increased with basalt application, but did not change with concrete fines or steel slags, except for increased tassel biomass. Mg, Ca and Si generally increased in the crops, while heavy metal concentrations remained unaffected or even decreased in the plants. Overall, crops were positively affected by application of silicate materials.
Peter Levy, Laura Bentley, Peter Danks, Bridget Emmett, Angus Garbutt, Stephen Heming, Peter Henrys, Aidan Keith, Inma Lebron, Niall McNamara, Richard Pywell, John Redhead, David Robinson, and Alexander Wickenden
Biogeosciences, 21, 4301–4315, https://doi.org/10.5194/bg-21-4301-2024, https://doi.org/10.5194/bg-21-4301-2024, 2024
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We collated a large data set (15 790 soil cores) on soil carbon stock in different land uses. Soil carbon stocks were highest in woodlands and lowest in croplands. The variability in the effects was large. This has important implications for agri-environment schemes seeking to sequester carbon in the soil by altering land use because the effect of a given intervention is very hard to verify.
Marija Stojanova, Pierre Arbelet, François Baudin, Nicolas Bouton, Giovanni Caria, Lorenza Pacini, Nicolas Proix, Edouard Quibel, Achille Thin, and Pierre Barré
Biogeosciences, 21, 4229–4237, https://doi.org/10.5194/bg-21-4229-2024, https://doi.org/10.5194/bg-21-4229-2024, 2024
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Because of its importance for climate regulation and soil health, many studies focus on carbon dynamics in soils. However, quantifying organic and inorganic carbon remains an issue in carbonated soils. In this technical note, we propose a validated correction method to quantify organic and inorganic carbon in soils using Rock-Eval® thermal analysis. With this correction, the Rock-Eval® method has the potential to become the standard method for quantifying carbon in carbonate soils.
Claude Raoul Müller, Johan Six, Daniel Mugendi Njiru, Bernard Vanlauwe, and Marijn Van de Broek
EGUsphere, https://doi.org/10.5194/egusphere-2024-2796, https://doi.org/10.5194/egusphere-2024-2796, 2024
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We studied how different organic and inorganic nutrient inputs affect soil organic carbon (SOC) down to 70 cm in Kenya. After 19 years, all organic treatments increased SOC stocks as compared to the control, but mineral nitrogen had no significant effect. Manure was the organic treatment that significantly increased SOC the deepest as its effect could be observed down to 60 cm. Manure was the best strategy to limit SOC loss in croplands and maintain soil quality after deforestation.
Frank Hagedorn, Joesphine Imboden, Pavel Moiseev, Decai Gao, Emmanuel Frossard, Daniel Christen, Konstantin Gavazov, and Jasmin Fetzer
EGUsphere, https://doi.org/10.5194/egusphere-2024-2622, https://doi.org/10.5194/egusphere-2024-2622, 2024
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At treeline, plant species change abruptly from low stature plants in tundra to trees in forests. Our study documents that from tundra towards forest, the litter layer gets strongly enriched in nutrients. We show that these litter quality changes alter nutrient processing by soil microbes and increase the nutrient release during decomposition in forest than in tundra. The associated improvement of nutrient availability in the forest potentially stimulates tree growth and treeline shifts.
Armando Molina, Veerle Vanacker, Oliver Chadwick, Santiago Zhiminaicela, Marife Corre, and Edzo Veldkamp
Biogeosciences, 21, 3075–3091, https://doi.org/10.5194/bg-21-3075-2024, https://doi.org/10.5194/bg-21-3075-2024, 2024
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The tropical Andes contains unique landscapes where forest patches are surrounded by tussock grasses and cushion-forming plants. The aboveground vegetation composition informs us about belowground nutrient availability: patterns in plant-available nutrients resulted from strong biocycling of cations and removal of soil nutrients by plant uptake or leaching. Future changes in vegetation distribution will affect soil water and solute fluxes and the aquatic ecology of Andean rivers and lakes.
Sahiti Bulusu, Cristina Prieto García, Helen E. Dahlke, and Elad Levintal
Biogeosciences, 21, 3007–3013, https://doi.org/10.5194/bg-21-3007-2024, https://doi.org/10.5194/bg-21-3007-2024, 2024
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Do-it-yourself hardware is a new way to improve measurement resolution. We present a low-cost, automated system for field measurements of low nitrate concentrations in soil porewater and open water bodies. All data hardware components cost USD 1100, which is much cheaper than other available commercial solutions. We provide the complete building guide to reduce technical barriers, which we hope will allow easier reproducibility and set up new soil and environmental monitoring applications.
Violeta Mendoza-Martinez, Scott L. Collins, and Jennie R. McLaren
Biogeosciences, 21, 2655–2667, https://doi.org/10.5194/bg-21-2655-2024, https://doi.org/10.5194/bg-21-2655-2024, 2024
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We examine the impacts of multi-decadal nitrogen additions on a dryland ecosystem N budget, including the soil, microbial, and plant N pools. After 26 years, there appears to be little impact on the soil microbial or plant community and only minimal increases in N pools within the soil. While perhaps encouraging from a conservation standpoint, we calculate that greater than 95 % of the nitrogen added to the system is not retained and is instead either lost deeper in the soil or emitted as gas.
Sean Fettrow, Andrew Wozniak, Holly A. Michael, and Angelia L. Seyfferth
Biogeosciences, 21, 2367–2384, https://doi.org/10.5194/bg-21-2367-2024, https://doi.org/10.5194/bg-21-2367-2024, 2024
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Salt marshes play a big role in global carbon (C) storage, and C stock estimates are used to predict future changes. However, spatial and temporal gradients in C burial rates over the landscape exist due to variations in water inundation, dominant plant species and stage of growth, and tidal action. We quantified soil C concentrations in soil cores across time and space beside several porewater biogeochemical variables and discussed the controls on variability in soil C in salt marsh ecosystems.
Andrés Tangarife-Escobar, Georg Guggenberger, Xiaojuan Feng, Guohua Dai, Carolina Urbina-Malo, Mina Azizi-Rad, and Carlos A. Sierra
Biogeosciences, 21, 1277–1299, https://doi.org/10.5194/bg-21-1277-2024, https://doi.org/10.5194/bg-21-1277-2024, 2024
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Soil organic matter stability depends on future temperature and precipitation scenarios. We used radiocarbon (14C) data and model predictions to understand how the transit time of carbon varies under environmental change in grasslands and peatlands. Soil moisture affected the Δ14C of peatlands, while temperature did not have any influence. Our models show the correspondence between Δ14C and transit time and could allow understanding future interactions between terrestrial and atmospheric carbon
Emiko K. Stuart, Laura Castañeda-Gómez, Wolfram Buss, Jeff R. Powell, and Yolima Carrillo
Biogeosciences, 21, 1037–1059, https://doi.org/10.5194/bg-21-1037-2024, https://doi.org/10.5194/bg-21-1037-2024, 2024
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We inoculated wheat plants with various types of fungi whose impacts on soil carbon are poorly understood. After several months of growth, we examined both their impacts on soil carbon and the underlying mechanisms using multiple methods. Overall the fungi benefitted the storage of carbon in soil, mainly by improving the stability of pre-existing carbon, but several pathways were involved. This study demonstrates their importance for soil carbon storage and, therefore, climate change mitigation.
Huimin Sun, Michael W. I. Schmidt, Jintao Li, Jinquan Li, Xiang Liu, Nicholas O. E. Ofiti, Shurong Zhou, and Ming Nie
Biogeosciences, 21, 575–589, https://doi.org/10.5194/bg-21-575-2024, https://doi.org/10.5194/bg-21-575-2024, 2024
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A soil organic carbon (SOC) molecular structure suggested that the easily decomposable and stabilized SOC is similarly affected after 9-year warming and N treatments despite large changes in SOC stocks. Given the long residence time of some SOC, the similar loss of all measurable chemical forms of SOC under global change treatments could have important climate consequences.
Haoli Zhang, Doudou Chang, Zhifeng Zhu, Chunmei Meng, and Kaiyong Wang
Biogeosciences, 21, 1–11, https://doi.org/10.5194/bg-21-1-2024, https://doi.org/10.5194/bg-21-1-2024, 2024
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Soil salinity mediates microorganisms and soil processes like soil organic carbon (SOC) cycling. We observed that negative priming effects at the early stages might be due to the preferential utilization of cottonseed meal. The positive priming that followed decreased with the increase in salinity.
Joséphine Hazera, David Sebag, Isabelle Kowalewski, Eric Verrecchia, Herman Ravelojaona, and Tiphaine Chevallier
Biogeosciences, 20, 5229–5242, https://doi.org/10.5194/bg-20-5229-2023, https://doi.org/10.5194/bg-20-5229-2023, 2023
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This study adapts the Rock-Eval® protocol to quantify soil organic carbon (SOC) and soil inorganic carbon (SIC) on a non-pretreated soil aliquot. The standard protocol properly estimates SOC contents once the TOC parameter is corrected. However, it cannot complete the thermal breakdown of SIC amounts > 4 mg, leading to an underestimation of high SIC contents by the MinC parameter, even after correcting for this. Thus, the final oxidation isotherm is extended to 7 min to quantify any SIC amount.
Bo Zhao, Amin Dou, Zhiwei Zhang, Zhenyu Chen, Wenbo Sun, Yanli Feng, Xiaojuan Wang, and Qiang Wang
Biogeosciences, 20, 4761–4774, https://doi.org/10.5194/bg-20-4761-2023, https://doi.org/10.5194/bg-20-4761-2023, 2023
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This study provided a comprehensive analysis of the spatial variability and determinants of Fe-bound organic carbon (Fe-OC) among terrestrial, wetland, and marine ecosystems and its governing factors globally. We illustrated that reactive Fe was not only an important sequestration mechanism for OC in terrestrial ecosystems but also an effective “rusty sink” of OC preservation in wetland and marine ecosystems, i.e., a key factor for long-term OC storage in global ecosystems.
Han Sun, Tomoyasu Nishizawa, Hiroyuki Ohta, and Kazuhiko Narisawa
Biogeosciences, 20, 4737–4749, https://doi.org/10.5194/bg-20-4737-2023, https://doi.org/10.5194/bg-20-4737-2023, 2023
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In this research, we assessed the diversity and function of the dark septate endophytic (DSE) fungi community associated with Miscanthus condensatus root in volcanic ecosystems. Both metabarcoding and isolation were adopted in this study. We further validated effects on plant growth by inoculation of some core DSE isolates. This study helps improve our understanding of the role of Miscanthus condensatus-associated DSE fungi during the restoration of post-volcanic ecosystems.
Xianjin He, Laurent Augusto, Daniel S. Goll, Bruno Ringeval, Ying-Ping Wang, Julian Helfenstein, Yuanyuan Huang, and Enqing Hou
Biogeosciences, 20, 4147–4163, https://doi.org/10.5194/bg-20-4147-2023, https://doi.org/10.5194/bg-20-4147-2023, 2023
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We identified total soil P concentration as the most important predictor of all soil P pool concentrations, except for primary mineral P concentration, which is primarily controlled by soil pH and only secondarily by total soil P concentration. We predicted soil P pools’ distributions in natural systems, which can inform assessments of the role of natural P availability for ecosystem productivity, climate change mitigation, and the functioning of the Earth system.
Imane Slimani, Xia Zhu-Barker, Patricia Lazicki, and William Horwath
Biogeosciences, 20, 3873–3894, https://doi.org/10.5194/bg-20-3873-2023, https://doi.org/10.5194/bg-20-3873-2023, 2023
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There is a strong link between nitrogen availability and iron minerals in soils. These minerals have multiple outcomes for nitrogen availability depending on soil conditions and properties. For example, iron can limit microbial degradation of nitrogen in aerated soils but has opposing outcomes in non-aerated soils. This paper focuses on the multiple ways iron can affect nitrogen bioavailability in soils.
Shane W. Stoner, Marion Schrumpf, Alison Hoyt, Carlos A. Sierra, Sebastian Doetterl, Valier Galy, and Susan Trumbore
Biogeosciences, 20, 3151–3163, https://doi.org/10.5194/bg-20-3151-2023, https://doi.org/10.5194/bg-20-3151-2023, 2023
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Soils store more carbon (C) than any other terrestrial C reservoir, but the processes that control how much C stays in soil, and for how long, are very complex. Here, we used a recent method that involves heating soil in the lab to measure the range of C ages in soil. We found that most C in soil is decades to centuries old, while some stays for much shorter times (days to months), and some is thousands of years old. Such detail helps us to estimate how soil C may react to changing climate.
Adetunji Alex Adekanmbi, Laurence Dale, Liz Shaw, and Tom Sizmur
Biogeosciences, 20, 2207–2219, https://doi.org/10.5194/bg-20-2207-2023, https://doi.org/10.5194/bg-20-2207-2023, 2023
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The decomposition of soil organic matter and flux of carbon dioxide are expected to increase as temperatures rise. However, soil organic matter decomposition is a two-step process whereby large molecules are first broken down outside microbial cells and then respired within microbial cells. We show here that these two steps are not equally sensitive to increases in soil temperature and that global warming may cause a shift in the rate-limiting step from outside to inside the microbial cell.
Mercedes Román Dobarco, Alexandre M. J-C. Wadoux, Brendan Malone, Budiman Minasny, Alex B. McBratney, and Ross Searle
Biogeosciences, 20, 1559–1586, https://doi.org/10.5194/bg-20-1559-2023, https://doi.org/10.5194/bg-20-1559-2023, 2023
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Soil organic carbon (SOC) is of a heterogeneous nature and varies in chemistry, stabilisation mechanisms, and persistence in soil. In this study we mapped the stocks of SOC fractions with different characteristics and turnover rates (presumably PyOC >= MAOC > POC) across Australia, combining spectroscopy and digital soil mapping. The SOC stocks (0–30 cm) were estimated as 13 Pg MAOC, 2 Pg POC, and 5 Pg PyOC.
Frederick Büks
Biogeosciences, 20, 1529–1535, https://doi.org/10.5194/bg-20-1529-2023, https://doi.org/10.5194/bg-20-1529-2023, 2023
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Ultrasonication with density fractionation of soils is a commonly used method to separate soil organic matter pools, which is, e.g., important to calculate carbon turnover in landscapes. It is shown that the approach that merges soil and dense solution without mixing has a low recovery rate and causes co-extraction of parts of the retained labile pool along with the intermediate pool. An alternative method with high recovery rates and no cross-contamination was recommended.
Tino Peplau, Christopher Poeplau, Edward Gregorich, and Julia Schroeder
Biogeosciences, 20, 1063–1074, https://doi.org/10.5194/bg-20-1063-2023, https://doi.org/10.5194/bg-20-1063-2023, 2023
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We buried tea bags and temperature loggers in a paired-plot design in soils under forest and agricultural land and retrieved them after 2 years to quantify the effect of land-use change on soil temperature and litter decomposition in subarctic agricultural systems. We could show that agricultural soils were on average 2 °C warmer than forests and that litter decomposition was enhanced. The results imply that deforestation amplifies effects of climate change on soil organic matter dynamics.
Joseph Okello, Marijn Bauters, Hans Verbeeck, Samuel Bodé, John Kasenene, Astrid Françoys, Till Engelhardt, Klaus Butterbach-Bahl, Ralf Kiese, and Pascal Boeckx
Biogeosciences, 20, 719–735, https://doi.org/10.5194/bg-20-719-2023, https://doi.org/10.5194/bg-20-719-2023, 2023
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The increase in global and regional temperatures has the potential to drive accelerated soil organic carbon losses in tropical forests. We simulated climate warming by translocating intact soil cores from higher to lower elevations. The results revealed increasing temperature sensitivity and decreasing losses of soil organic carbon with increasing elevation. Our results suggest that climate warming may trigger enhanced losses of soil organic carbon from tropical montane forests.
Johanna Pihlblad, Louise C. Andresen, Catriona A. Macdonald, David S. Ellsworth, and Yolima Carrillo
Biogeosciences, 20, 505–521, https://doi.org/10.5194/bg-20-505-2023, https://doi.org/10.5194/bg-20-505-2023, 2023
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Elevated CO2 in the atmosphere increases forest biomass productivity when growth is not limited by soil nutrients. This study explores how mature trees stimulate soil availability of nitrogen and phosphorus with free-air carbon dioxide enrichment after 5 years of fumigation. We found that both nutrient availability and processes feeding available pools increased in the rhizosphere, and phosphorus increased at depth. This appears to not be by decomposition but by faster recycling of nutrients.
Rodrigo Vargas and Van Huong Le
Biogeosciences, 20, 15–26, https://doi.org/10.5194/bg-20-15-2023, https://doi.org/10.5194/bg-20-15-2023, 2023
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Quantifying the role of soils in nature-based solutions requires accurate estimates of soil greenhouse gas (GHG) fluxes. We suggest that multiple GHG fluxes should not be simultaneously measured at a few fixed time intervals, but an optimized sampling approach can reduce bias and uncertainty. Our results have implications for assessing GHG fluxes from soils and a better understanding of the role of soils in nature-based solutions.
Kristine Karstens, Benjamin Leon Bodirsky, Jan Philipp Dietrich, Marta Dondini, Jens Heinke, Matthias Kuhnert, Christoph Müller, Susanne Rolinski, Pete Smith, Isabelle Weindl, Hermann Lotze-Campen, and Alexander Popp
Biogeosciences, 19, 5125–5149, https://doi.org/10.5194/bg-19-5125-2022, https://doi.org/10.5194/bg-19-5125-2022, 2022
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Soil organic carbon (SOC) has been depleted by anthropogenic land cover change and agricultural management. While SOC models often simulate detailed biochemical processes, the management decisions are still little investigated at the global scale. We estimate that soils have lost around 26 GtC relative to a counterfactual natural state in 1975. Yet, since 1975, SOC has been increasing again by 4 GtC due to a higher productivity, recycling of crop residues and manure, and no-tillage practices.
Petri Kiuru, Marjo Palviainen, Arianna Marchionne, Tiia Grönholm, Maarit Raivonen, Lukas Kohl, and Annamari Laurén
Biogeosciences, 19, 5041–5058, https://doi.org/10.5194/bg-19-5041-2022, https://doi.org/10.5194/bg-19-5041-2022, 2022
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Peatlands are large carbon stocks. Emissions of carbon dioxide and methane from peatlands may increase due to changes in management and climate. We studied the variation in the gas diffusivity of peat with depth using pore network simulations and laboratory experiments. Gas diffusivity was found to be lower in deeper peat with smaller pores and lower pore connectivity. However, gas diffusivity was not extremely low in wet conditions, which may reflect the distinctive structure of peat.
Rachael Akinyede, Martin Taubert, Marion Schrumpf, Susan Trumbore, and Kirsten Küsel
Biogeosciences, 19, 4011–4028, https://doi.org/10.5194/bg-19-4011-2022, https://doi.org/10.5194/bg-19-4011-2022, 2022
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Soils will likely become warmer in the future, and this can increase the release of carbon dioxide (CO2) into the atmosphere. As microbes can take up soil CO2 and prevent further escape into the atmosphere, this study compares the rate of uptake and release of CO2 at two different temperatures. With warming, the rate of CO2 uptake increases less than the rate of release, indicating that the capacity to modulate soil CO2 release into the atmosphere will decrease under future warming.
Giuseppe Cipolla, Salvatore Calabrese, Amilcare Porporato, and Leonardo V. Noto
Biogeosciences, 19, 3877–3896, https://doi.org/10.5194/bg-19-3877-2022, https://doi.org/10.5194/bg-19-3877-2022, 2022
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Enhanced weathering (EW) is a promising strategy for carbon sequestration. Since models may help to characterize field EW, the present work applies a hydro-biogeochemical model to four case studies characterized by different rainfall seasonality, vegetation and soil type. Rainfall seasonality strongly affects EW dynamics, but low carbon sequestration suggests that an in-depth analysis at the global scale is required to see if EW may be effective to mitigate climate change.
Vao Fenotiana Razanamahandry, Marjolein Dewaele, Gerard Govers, Liesa Brosens, Benjamin Campforts, Liesbet Jacobs, Tantely Razafimbelo, Tovonarivo Rafolisy, and Steven Bouillon
Biogeosciences, 19, 3825–3841, https://doi.org/10.5194/bg-19-3825-2022, https://doi.org/10.5194/bg-19-3825-2022, 2022
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In order to shed light on possible past vegetation shifts in the Central Highlands of Madagascar, we measured stable isotope ratios of organic carbon in soil profiles along both forested and grassland hillslope transects in the Lake Alaotra region. Our results show that the landscape of this region was more forested in the past: soils in the C4-dominated grasslands contained a substantial fraction of C3-derived carbon, increasing with depth.
Katherine E. O. Todd-Brown, Rose Z. Abramoff, Jeffrey Beem-Miller, Hava K. Blair, Stevan Earl, Kristen J. Frederick, Daniel R. Fuka, Mario Guevara Santamaria, Jennifer W. Harden, Katherine Heckman, Lillian J. Heran, James R. Holmquist, Alison M. Hoyt, David H. Klinges, David S. LeBauer, Avni Malhotra, Shelby C. McClelland, Lucas E. Nave, Katherine S. Rocci, Sean M. Schaeffer, Shane Stoner, Natasja van Gestel, Sophie F. von Fromm, and Marisa L. Younger
Biogeosciences, 19, 3505–3522, https://doi.org/10.5194/bg-19-3505-2022, https://doi.org/10.5194/bg-19-3505-2022, 2022
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Research data are becoming increasingly available online with tantalizing possibilities for reanalysis. However harmonizing data from different sources remains challenging. Using the soils community as an example, we walked through the various strategies that researchers currently use to integrate datasets for reanalysis. We find that manual data transcription is still extremely common and that there is a critical need for community-supported informatics tools like vocabularies and ontologies.
Alessandro Montemagno, Christophe Hissler, Victor Bense, Adriaan J. Teuling, Johanna Ziebel, and Laurent Pfister
Biogeosciences, 19, 3111–3129, https://doi.org/10.5194/bg-19-3111-2022, https://doi.org/10.5194/bg-19-3111-2022, 2022
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We investigated the biogeochemical processes that dominate the release and retention of elements (nutrients and potentially toxic elements) during litter degradation. Our results show that toxic elements are retained in the litter, while nutrients are released in solution during the first stages of degradation. This seems linked to the capability of trees to distribute the elements between degradation-resistant and non-degradation-resistant compounds of leaves according to their chemical nature.
Laura Sereni, Bertrand Guenet, Charlotte Blasi, Olivier Crouzet, Jean-Christophe Lata, and Isabelle Lamy
Biogeosciences, 19, 2953–2968, https://doi.org/10.5194/bg-19-2953-2022, https://doi.org/10.5194/bg-19-2953-2022, 2022
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This study focused on the modellisation of two important drivers of soil greenhouse gas emissions: soil contamination and soil moisture change. The aim was to include a Cu function in the soil biogeochemical model DNDC for different soil moisture conditions and then to estimate variation in N2O, NO2 or NOx emissions. Our results show a larger effect of Cu on N2 and N2O emissions than on the other nitrogen species and a higher effect for the soils incubated under constant constant moisture.
Marie Spohn and Johan Stendahl
Biogeosciences, 19, 2171–2186, https://doi.org/10.5194/bg-19-2171-2022, https://doi.org/10.5194/bg-19-2171-2022, 2022
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We explored the ratios of carbon (C), nitrogen (N), and phosphorus (P) of organic matter in Swedish forest soils. The N : P ratio of the organic layer was most strongly related to the mean annual temperature, while the C : N ratios of the organic layer and mineral soil were strongly related to tree species even in the subsoil. The organic P concentration in the mineral soil was strongly affected by soil texture, which diminished the effect of tree species on the C to organic P (C : OP) ratio.
Moritz Mainka, Laura Summerauer, Daniel Wasner, Gina Garland, Marco Griepentrog, Asmeret Asefaw Berhe, and Sebastian Doetterl
Biogeosciences, 19, 1675–1689, https://doi.org/10.5194/bg-19-1675-2022, https://doi.org/10.5194/bg-19-1675-2022, 2022
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The largest share of terrestrial carbon is stored in soils, making them highly relevant as regards global change. Yet, the mechanisms governing soil carbon stabilization are not well understood. The present study contributes to a better understanding of these processes. We show that qualitative changes in soil organic matter (SOM) co-vary with alterations of the soil matrix following soil weathering. Hence, the type of SOM that is stabilized in soils might change as soils develop.
Jasmin Fetzer, Emmanuel Frossard, Klaus Kaiser, and Frank Hagedorn
Biogeosciences, 19, 1527–1546, https://doi.org/10.5194/bg-19-1527-2022, https://doi.org/10.5194/bg-19-1527-2022, 2022
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As leaching is a major pathway of nitrogen and phosphorus loss in forest soils, we investigated several potential drivers in two contrasting beech forests. The composition of leachates, obtained by zero-tension lysimeters, varied by season, and climatic extremes influenced the magnitude of leaching. Effects of nitrogen and phosphorus fertilization varied with soil nutrient status and sorption properties, and leaching from the low-nutrient soil was more sensitive to environmental factors.
Karis J. McFarlane, Heather M. Throckmorton, Jeffrey M. Heikoop, Brent D. Newman, Alexandra L. Hedgpeth, Marisa N. Repasch, Thomas P. Guilderson, and Cathy J. Wilson
Biogeosciences, 19, 1211–1223, https://doi.org/10.5194/bg-19-1211-2022, https://doi.org/10.5194/bg-19-1211-2022, 2022
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Planetary warming is increasing seasonal thaw of permafrost, making this extensive old carbon stock vulnerable. In northern Alaska, we found more and older dissolved organic carbon in small drainages later in summer as more permafrost was exposed by deepening thaw. Younger and older carbon did not differ in chemical indicators related to biological lability suggesting this carbon can cycle through aquatic systems and contribute to greenhouse gas emissions as warming increases permafrost thaw.
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Short summary
Overall P content increased with decreasing size of soil aggregate-sized fractions. The relative distribution and speciation of varying P forms were independent of particle size. The majority of alkaline extractable P was in the amorphous Fe/Al oxide fraction, most of which was orthophosphate. Significant amounts of monoester P were also bound to these oxides. Residual P contained similar amounts of P occluded in amorphous and crystalline Fe oxides. This P may be released by FeO dissolution.
Overall P content increased with decreasing size of soil aggregate-sized fractions. The...
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