Articles | Volume 16, issue 15
https://doi.org/10.5194/bg-16-3069-2019
© Author(s) 2019. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/bg-16-3069-2019
© Author(s) 2019. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Research article
| 
13 Aug 2019
Research article |
| 13 Aug 2019
| 13 Aug 2019
Estimating global gross primary productivity using chlorophyll fluorescence and a data assimilation system with the BETHY-SCOPE model
Alexander J. Norton
School of Earth Sciences, University of Melbourne, Melbourne, Australia
School of Earth Sciences, University of Melbourne, Melbourne, Australia
Ernest N. Koffi
European Commission Joint Research Centre, Ispra, Italy
Marko Scholze
Department of Physical Geography and Ecosystem Science, Lund University, Lund, Sweden
Jeremy D. Silver
School of Earth Sciences, University of Melbourne, Melbourne, Australia
Ying-Ping Wang
CSIRO Oceans and Atmospheres, Aspendale, Australia
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Preprint archived
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Matthew J. McGrath, Ana Maria Roxana Petrescu, Philippe Peylin, Robbie M. Andrew, Bradley Matthews, Frank Dentener, Juraj Balkovič, Vladislav Bastrikov, Meike Becker, Gregoire Broquet, Philippe Ciais, Audrey Fortems-Cheiney, Raphael Ganzenmüller, Giacomo Grassi, Ian Harris, Matthew Jones, Jürgen Knauer, Matthias Kuhnert, Guillaume Monteil, Saqr Munassar, Paul I. Palmer, Glen P. Peters, Chunjing Qiu, Mart-Jan Schelhaas, Oksana Tarasova, Matteo Vizzarri, Karina Winkler, Gianpaolo Balsamo, Antoine Berchet, Peter Briggs, Patrick Brockmann, Frédéric Chevallier, Giulia Conchedda, Monica Crippa, Stijn N. C. Dellaert, Hugo A. C. Denier van der Gon, Sara Filipek, Pierre Friedlingstein, Richard Fuchs, Michael Gauss, Christoph Gerbig, Diego Guizzardi, Dirk Günther, Richard A. Houghton, Greet Janssens-Maenhout, Ronny Lauerwald, Bas Lerink, Ingrid T. Luijkx, Géraud Moulas, Marilena Muntean, Gert-Jan Nabuurs, Aurélie Paquirissamy, Lucia Perugini, Wouter Peters, Roberto Pilli, Julia Pongratz, Pierre Regnier, Marko Scholze, Yusuf Serengil, Pete Smith, Efisio Solazzo, Rona L. Thompson, Francesco N. Tubiello, Timo Vesala, and Sophia Walther
Earth Syst. Sci. Data, 15, 4295–4370, https://doi.org/10.5194/essd-15-4295-2023, https://doi.org/10.5194/essd-15-4295-2023, 2023
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Accurate estimation of fluxes of carbon dioxide from the land surface is essential for understanding future impacts of greenhouse gas emissions on the climate system. A wide variety of methods currently exist to estimate these sources and sinks. We are continuing work to develop annual comparisons of these diverse methods in order to clarify what they all actually calculate and to resolve apparent disagreement, in addition to highlighting opportunities for increased understanding.
Alexander J. Norton, A. Anthony Bloom, Nicholas C. Parazoo, Paul A. Levine, Shuang Ma, Renato K. Braghiere, and T. Luke Smallman
Biogeosciences, 20, 2455–2484, https://doi.org/10.5194/bg-20-2455-2023, https://doi.org/10.5194/bg-20-2455-2023, 2023
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This study explores how the representation of leaf phenology affects our ability to predict changes to the carbon balance of land ecosystems. We calibrate a new leaf phenology model against a diverse range of observations at six forest sites, showing that it improves the predictive capability of the processes underlying the ecosystem carbon balance. We then show how changes in temperature and rainfall affect the ecosystem carbon balance with this new model.
Saqr Munassar, Guillaume Monteil, Marko Scholze, Ute Karstens, Christian Rödenbeck, Frank-Thomas Koch, Kai U. Totsche, and Christoph Gerbig
Atmos. Chem. Phys., 23, 2813–2828, https://doi.org/10.5194/acp-23-2813-2023, https://doi.org/10.5194/acp-23-2813-2023, 2023
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Yohanna Villalobos, Peter J. Rayner, Jeremy D. Silver, Steven Thomas, Vanessa Haverd, Jürgen Knauer, Zoë M. Loh, Nicholas M. Deutscher, David W. T. Griffith, and David F. Pollard
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Zhenyi Chen, Robyn Schofield, Melita Keywood, Sam Cleland, Alastair G. Williams, Alan Griffiths, Stephen Wilson, Peter Rayner, and Xiaowen Shu
Atmos. Chem. Phys. Discuss., https://doi.org/10.5194/acp-2022-104, https://doi.org/10.5194/acp-2022-104, 2022
Revised manuscript not accepted
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Yan Yang, A. Anthony Bloom, Shuang Ma, Paul Levine, Alexander Norton, Nicholas C. Parazoo, John T. Reager, John Worden, Gregory R. Quetin, T. Luke Smallman, Mathew Williams, Liang Xu, and Sassan Saatchi
Geosci. Model Dev., 15, 1789–1802, https://doi.org/10.5194/gmd-15-1789-2022, https://doi.org/10.5194/gmd-15-1789-2022, 2022
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Global carbon and water have large uncertainties that are hard to quantify in current regional and global models. Field observations provide opportunities for better calibration and validation of current modeling of carbon and water. With the unique structure of CARDAMOM, we have utilized the data assimilation capability and designed the benchmarking framework by using field observations in modeling. Results show that data assimilation improves model performance in different aspects.
Stephanie G. Stettz, Nicholas C. Parazoo, A. Anthony Bloom, Peter D. Blanken, David R. Bowling, Sean P. Burns, Cédric Bacour, Fabienne Maignan, Brett Raczka, Alexander J. Norton, Ian Baker, Mathew Williams, Mingjie Shi, Yongguang Zhang, and Bo Qiu
Biogeosciences, 19, 541–558, https://doi.org/10.5194/bg-19-541-2022, https://doi.org/10.5194/bg-19-541-2022, 2022
Short summary
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Uncertainty in the response of photosynthesis to temperature poses a major challenge to predicting the response of forests to climate change. In this paper, we study how photosynthesis in a mountainous evergreen forest is limited by temperature. This study highlights that cold temperature is a key factor that controls spring photosynthesis. Including the cold-temperature limitation in an ecosystem model improved its ability to simulate spring photosynthesis.
Xianjin He, Laurent Augusto, Daniel S. Goll, Bruno Ringeval, Yingping Wang, Julian Helfenstein, Yuanyuan Huang, Kailiang Yu, Zhiqiang Wang, Yongchuan Yang, and Enqing Hou
Earth Syst. Sci. Data, 13, 5831–5846, https://doi.org/10.5194/essd-13-5831-2021, https://doi.org/10.5194/essd-13-5831-2021, 2021
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Our database of globally distributed natural soil total P (STP) concentration showed concentration ranged from 1.4 to 9630.0 (mean 570.0) mg kg−1. Global predictions of STP concentration increased with latitude. Global STP stocks (excluding Antarctica) were estimated to be 26.8 and 62.2 Pg in the topsoil and subsoil, respectively. Our global map of STP concentration can be used to constrain Earth system models representing the P cycle and to inform quantification of global soil P availability.
Yohanna Villalobos, Peter J. Rayner, Jeremy D. Silver, Steven Thomas, Vanessa Haverd, Jürgen Knauer, Zoë M. Loh, Nicholas M. Deutscher, David W. T. Griffith, and David F. Pollard
Atmos. Chem. Phys., 21, 17453–17494, https://doi.org/10.5194/acp-21-17453-2021, https://doi.org/10.5194/acp-21-17453-2021, 2021
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Semi-arid ecosystems such as those in Australia are evolving and might play an essential role in the future of climate change. We use carbon dioxide concentrations derived from the OCO-2 satellite instrument and a regional transport model to understand if Australia was a carbon sink or source of CO2 in 2015. Our research's main findings suggest that Australia acted as a carbon sink of about −0.41 ± 0.08 petagrams of carbon in 2015, driven primarily by savanna and sparsely vegetated ecosystems.
Juhwan Lee, Raphael A. Viscarra Rossel, Mingxi Zhang, Zhongkui Luo, and Ying-Ping Wang
Biogeosciences, 18, 5185–5202, https://doi.org/10.5194/bg-18-5185-2021, https://doi.org/10.5194/bg-18-5185-2021, 2021
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We performed Roth C simulations across Australia and assessed the response of soil carbon to changing inputs and future climate change using a consistent modelling framework. Site-specific initialisation of the C pools with measurements of the C fractions is essential for accurate simulations of soil organic C stocks and composition at a large scale. With further warming, Australian soils will become more vulnerable to C loss: natural environments > native grazing > cropping > modified grazing.
Antoine Berchet, Espen Sollum, Rona L. Thompson, Isabelle Pison, Joël Thanwerdas, Grégoire Broquet, Frédéric Chevallier, Tuula Aalto, Adrien Berchet, Peter Bergamaschi, Dominik Brunner, Richard Engelen, Audrey Fortems-Cheiney, Christoph Gerbig, Christine D. Groot Zwaaftink, Jean-Matthieu Haussaire, Stephan Henne, Sander Houweling, Ute Karstens, Werner L. Kutsch, Ingrid T. Luijkx, Guillaume Monteil, Paul I. Palmer, Jacob C. A. van Peet, Wouter Peters, Philippe Peylin, Elise Potier, Christian Rödenbeck, Marielle Saunois, Marko Scholze, Aki Tsuruta, and Yuanhong Zhao
Geosci. Model Dev., 14, 5331–5354, https://doi.org/10.5194/gmd-14-5331-2021, https://doi.org/10.5194/gmd-14-5331-2021, 2021
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We present here the Community Inversion Framework (CIF) to help rationalize development efforts and leverage the strengths of individual inversion systems into a comprehensive framework. The CIF is a programming protocol to allow various inversion bricks to be exchanged among researchers.
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Guillaume Monteil and Marko Scholze
Geosci. Model Dev., 14, 3383–3406, https://doi.org/10.5194/gmd-14-3383-2021, https://doi.org/10.5194/gmd-14-3383-2021, 2021
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LUMIA is a Python library for atmospheric inversions, originally developed at Lund University to perform regional atmospheric CO2 inversions. The inversions rely on coupling the regional transport model FLEXPART and the global transport model TM5. The paper presents the modeling setup and some first results, and it introduces the LUMIA Python package as a toolbox for inversions beyond the use case presented in the paper.
Ana Maria Roxana Petrescu, Matthew J. McGrath, Robbie M. Andrew, Philippe Peylin, Glen P. Peters, Philippe Ciais, Gregoire Broquet, Francesco N. Tubiello, Christoph Gerbig, Julia Pongratz, Greet Janssens-Maenhout, Giacomo Grassi, Gert-Jan Nabuurs, Pierre Regnier, Ronny Lauerwald, Matthias Kuhnert, Juraj Balkovič, Mart-Jan Schelhaas, Hugo A. C. Denier van der
Gon, Efisio Solazzo, Chunjing Qiu, Roberto Pilli, Igor B. Konovalov, Richard A. Houghton, Dirk Günther, Lucia Perugini, Monica Crippa, Raphael Ganzenmüller, Ingrid T. Luijkx, Pete Smith, Saqr Munassar, Rona L. Thompson, Giulia Conchedda, Guillaume Monteil, Marko Scholze, Ute Karstens, Patrick Brockmann, and Albertus Johannes Dolman
Earth Syst. Sci. Data, 13, 2363–2406, https://doi.org/10.5194/essd-13-2363-2021, https://doi.org/10.5194/essd-13-2363-2021, 2021
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This study is topical and provides a state-of-the-art scientific overview of data availability from bottom-up and top-down CO2 fossil emissions and CO2 land fluxes in the EU27+UK. The data integrate recent emission inventories with ecosystem data, land carbon models and regional/global inversions for the European domain, aiming at reconciling CO2 estimates with official country-level UNFCCC national GHG inventories in support to policy and facilitating real-time verification procedures.
Erqian Cui, Chenyu Bian, Yiqi Luo, Shuli Niu, Yingping Wang, and Jianyang Xia
Biogeosciences, 17, 6237–6246, https://doi.org/10.5194/bg-17-6237-2020, https://doi.org/10.5194/bg-17-6237-2020, 2020
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Mean annual net ecosystem productivity (NEP) is related to the magnitude of the carbon sink of a specific ecosystem, while its inter-annual variation (IAVNEP) characterizes the stability of such a carbon sink. Thus, a better understanding of the co-varying NEP and IAVNEP is critical for locating the major and stable carbon sinks on land. Based on daily NEP observations from eddy-covariance sites, we found local indicators for the spatially varying NEP and IAVNEP, respectively.
Robert G. Ryan, Jeremy D. Silver, Richard Querel, Dan Smale, Steve Rhodes, Matt Tully, Nicholas Jones, and Robyn Schofield
Atmos. Meas. Tech., 13, 6501–6519, https://doi.org/10.5194/amt-13-6501-2020, https://doi.org/10.5194/amt-13-6501-2020, 2020
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Models have identified Australasia as a formaldehyde (HCHO) hotspot from vegetation sources, but few measurement studies exist to verify this. We compare, and find good agreement between, HCHO measurements using three – two ground-based and one satellite-based – different spectroscopic techniques in Australia and New Zealand. This gives confidence in using satellite observations to study HCHO and associated air chemistry and pollution problems in this under-studied part of the world.
Guillaume Monteil, Grégoire Broquet, Marko Scholze, Matthew Lang, Ute Karstens, Christoph Gerbig, Frank-Thomas Koch, Naomi E. Smith, Rona L. Thompson, Ingrid T. Luijkx, Emily White, Antoon Meesters, Philippe Ciais, Anita L. Ganesan, Alistair Manning, Michael Mischurow, Wouter Peters, Philippe Peylin, Jerôme Tarniewicz, Matt Rigby, Christian Rödenbeck, Alex Vermeulen, and Evie M. Walton
Atmos. Chem. Phys., 20, 12063–12091, https://doi.org/10.5194/acp-20-12063-2020, https://doi.org/10.5194/acp-20-12063-2020, 2020
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The paper presents the first results from the EUROCOM project, a regional atmospheric inversion intercomparison exercise involving six European research groups. It aims to produce an estimate of the net carbon flux between the European terrestrial ecosystems and the atmosphere for the period 2006–2015, based on constraints provided by observed CO2 concentrations and using inverse modelling techniques. The use of six different models enables us to investigate the robustness of the results.
Malte Meinshausen, Zebedee R. J. Nicholls, Jared Lewis, Matthew J. Gidden, Elisabeth Vogel, Mandy Freund, Urs Beyerle, Claudia Gessner, Alexander Nauels, Nico Bauer, Josep G. Canadell, John S. Daniel, Andrew John, Paul B. Krummel, Gunnar Luderer, Nicolai Meinshausen, Stephen A. Montzka, Peter J. Rayner, Stefan Reimann, Steven J. Smith, Marten van den Berg, Guus J. M. Velders, Martin K. Vollmer, and Ray H. J. Wang
Geosci. Model Dev., 13, 3571–3605, https://doi.org/10.5194/gmd-13-3571-2020, https://doi.org/10.5194/gmd-13-3571-2020, 2020
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This study provides the future greenhouse gas (GHG) concentrations under the new set of so-called SSP scenarios (the successors of the IPCC SRES and previous representative concentration pathway (RCP) scenarios). The projected CO2 concentrations range from 350 ppm for low-emission scenarios by 2150 to more than 2000 ppm under the high-emission scenarios. We also provide concentrations, latitudinal gradients, and seasonality for most of the other 42 considered GHGs.
Yohanna Villalobos, Peter Rayner, Steven Thomas, and Jeremy Silver
Atmos. Chem. Phys., 20, 8473–8500, https://doi.org/10.5194/acp-20-8473-2020, https://doi.org/10.5194/acp-20-8473-2020, 2020
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Estimated carbon fluxes for Australia are subject to considerable uncertainty. We ran simulation experiments over Australia to determine how much these uncertainties can be constrained using satellite data. We found that the satellite data has the potential to reduce these uncertainties up to 80 % across the whole continent. For 1 month, this percentage corresponds to 0.51 Pg C y-1 for Australia. This method could lead to significantly more accurate estimates of Australia's carbon budget.
Nicholas C. Parazoo, Troy Magney, Alex Norton, Brett Raczka, Cédric Bacour, Fabienne Maignan, Ian Baker, Yongguang Zhang, Bo Qiu, Mingjie Shi, Natasha MacBean, Dave R. Bowling, Sean P. Burns, Peter D. Blanken, Jochen Stutz, Katja Grossmann, and Christian Frankenberg
Biogeosciences, 17, 3733–3755, https://doi.org/10.5194/bg-17-3733-2020, https://doi.org/10.5194/bg-17-3733-2020, 2020
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Satellite measurements of solar-induced chlorophyll fluorescence (SIF) provide a global measure of photosynthetic change. This enables scientists to better track carbon cycle responses to environmental change and tune biochemical processes in vegetation models for an improved simulation of future change. We use tower-instrumented SIF measurements and controlled model experiments to assess the state of the art in terrestrial biosphere SIF modeling and find a wide range of sensitivities to light.
Peter Rayner
Atmos. Chem. Phys., 20, 3725–3737, https://doi.org/10.5194/acp-20-3725-2020, https://doi.org/10.5194/acp-20-3725-2020, 2020
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This work extends previous calculations of carbon dioxide sources and sinks to take account of the varying quality of atmospheric models. It uses an extended version of Bayesian statistics which includes the model as one of the unknowns. I performed the work as an example of including the model in the description of the uncertainty.
Peter J. Rayner, Anna M. Michalak, and Frédéric Chevallier
Atmos. Chem. Phys., 19, 13911–13932, https://doi.org/10.5194/acp-19-13911-2019, https://doi.org/10.5194/acp-19-13911-2019, 2019
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This paper describes the methods for combining models and data to understand how nutrients and pollutants move through natural systems. The methods are analogous to the process of weather forecasting in which previous information is combined with new observations and a model to improve our knowledge of the internal state of the physical system. The methods appear highly diverse but the paper shows that they are all examples of a single underlying formalism.
Alecia Nickless, Peter J. Rayner, Robert J. Scholes, Francois Engelbrecht, and Birgit Erni
Atmos. Chem. Phys., 19, 7789–7816, https://doi.org/10.5194/acp-19-7789-2019, https://doi.org/10.5194/acp-19-7789-2019, 2019
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Different frameworks for an atmospheric inversion study over Cape Town, South Africa, are considered. We focused particularly on how sensitive the estimates of CO2 fluxes were to changes in the way the uncertainty in these estimates was specified and the impact different prior information had on the final flux estimates. We used atmospheric measurements from two new sites located near Cape Town: Robben Island and Hangklip lighthouses, which were specifically deployed for this inversion study.
Kathryn M. Emmerson, Jeremy D. Silver, Edward Newbigin, Edwin R. Lampugnani, Cenk Suphioglu, Alan Wain, and Elizabeth Ebert
Geosci. Model Dev., 12, 2195–2214, https://doi.org/10.5194/gmd-12-2195-2019, https://doi.org/10.5194/gmd-12-2195-2019, 2019
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We present the first representation of grass pollen in a 3-D dispersion model in Australia, tested using observations from eight counting sites in Victoria. The technology was developed in response to the severe thunderstorm asthma event which took place in Melbourne in November 2016. A total of 10 pollen emission methodologies were developed and evaluated. The best results were obtained using statistical methods that included elements of the satellite derived enhanced vegetation index.
Jing Wang, Jianyang Xia, Xuhui Zhou, Kun Huang, Jian Zhou, Yuanyuan Huang, Lifen Jiang, Xia Xu, Junyi Liang, Ying-Ping Wang, Xiaoli Cheng, and Yiqi Luo
Biogeosciences, 16, 917–926, https://doi.org/10.5194/bg-16-917-2019, https://doi.org/10.5194/bg-16-917-2019, 2019
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Soil is critical in mitigating climate change mainly because soil carbon turns over much slower in soils than vegetation and the atmosphere. However, Earth system models (ESMs) have large uncertainty in simulating carbon dynamics due to their biased estimation of soil carbon transit time (τsoil). Here, the τsoil estimates from 12 ESMs that participated in CMIP5 were evaluated by a database of measured τsoil. We detected a large spatial variation in measured τsoil across the globe.
Qianyu Li, Xingjie Lu, Yingping Wang, Xin Huang, Peter M. Cox, and Yiqi Luo
Biogeosciences, 15, 6909–6925, https://doi.org/10.5194/bg-15-6909-2018, https://doi.org/10.5194/bg-15-6909-2018, 2018
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Land-surface models have been widely used to predict the responses of terrestrial ecosystems to climate change. A better understanding of model mechanisms that govern terrestrial ecosystem responses to rising atmosphere [CO2] is needed. Our study for the first time shows that the expansion of leaf area under rising [CO2] is the most important response for the stimulation of land carbon accumulation by a land-surface model: CABLE. Processes related to leaf area should be better calibrated.
Xingjie Lu, Ying-Ping Wang, Yiqi Luo, and Lifen Jiang
Biogeosciences, 15, 6559–6572, https://doi.org/10.5194/bg-15-6559-2018, https://doi.org/10.5194/bg-15-6559-2018, 2018
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How long does C cycle through terrestrial ecosystems is a critical question for understanding land C sequestration capacity under future rising atmosphere [CO2] and climate warming. Under climate change, previous conventional concepts with a steady-state assumption will no longer be suitable for a non-steady state. Our results using the new concept, C transit time, suggest more significant responses in terrestrial C cycle under rising [CO2] and climate warming.
Yilong Wang, Philippe Ciais, Daniel Goll, Yuanyuan Huang, Yiqi Luo, Ying-Ping Wang, A. Anthony Bloom, Grégoire Broquet, Jens Hartmann, Shushi Peng, Josep Penuelas, Shilong Piao, Jordi Sardans, Benjamin D. Stocker, Rong Wang, Sönke Zaehle, and Sophie Zechmeister-Boltenstern
Geosci. Model Dev., 11, 3903–3928, https://doi.org/10.5194/gmd-11-3903-2018, https://doi.org/10.5194/gmd-11-3903-2018, 2018
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We present a new modeling framework called Global Observation-based Land-ecosystems Utilization Model of Carbon, Nitrogen and Phosphorus (GOLUM-CNP) that combines a data-constrained C-cycle analysis with data-driven estimates of N and P inputs and losses and with observed stoichiometric ratios. GOLUM-CNP provides a traceable tool, where a consistency between different datasets of global C, N, and P cycles has been achieved.
Alexander J. Norton, Peter J. Rayner, Ernest N. Koffi, Marko Scholze, Jeremy D. Silver, and Ying-Ping Wang
Biogeosciences Discuss., https://doi.org/10.5194/bg-2018-270, https://doi.org/10.5194/bg-2018-270, 2018
Revised manuscript has not been submitted
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This study presents a global estimate of land carbon uptake through photosynthesis. We make use satellite chlorophyll fluorescence measurements, a visible indicator of photosynthesis, to optimize model parameters and then use the optimized model to estimate photosynthetic carbon uptake. This provides a new tool that can combine measurements and observations in a systematic way and maximise the use of chlorophyll fluorescence to improve our understanding of the land carbon cycle.
Donghai Wu, Philippe Ciais, Nicolas Viovy, Alan K. Knapp, Kevin Wilcox, Michael Bahn, Melinda D. Smith, Sara Vicca, Simone Fatichi, Jakob Zscheischler, Yue He, Xiangyi Li, Akihiko Ito, Almut Arneth, Anna Harper, Anna Ukkola, Athanasios Paschalis, Benjamin Poulter, Changhui Peng, Daniel Ricciuto, David Reinthaler, Guangsheng Chen, Hanqin Tian, Hélène Genet, Jiafu Mao, Johannes Ingrisch, Julia E. S. M. Nabel, Julia Pongratz, Lena R. Boysen, Markus Kautz, Michael Schmitt, Patrick Meir, Qiuan Zhu, Roland Hasibeder, Sebastian Sippel, Shree R. S. Dangal, Stephen Sitch, Xiaoying Shi, Yingping Wang, Yiqi Luo, Yongwen Liu, and Shilong Piao
Biogeosciences, 15, 3421–3437, https://doi.org/10.5194/bg-15-3421-2018, https://doi.org/10.5194/bg-15-3421-2018, 2018
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Our results indicate that most ecosystem models do not capture the observed asymmetric responses under normal precipitation conditions, suggesting an overestimate of the drought effects and/or underestimate of the watering impacts on primary productivity, which may be the result of inadequate representation of key eco-hydrological processes. Collaboration between modelers and site investigators needs to be strengthened to improve the specific processes in ecosystem models in following studies.
Alexander J. Norton, Peter J. Rayner, Ernest N. Koffi, and Marko Scholze
Geosci. Model Dev., 11, 1517–1536, https://doi.org/10.5194/gmd-11-1517-2018, https://doi.org/10.5194/gmd-11-1517-2018, 2018
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It is difficult to estimate how much CO2 plants absorb via photosynthesis and even more difficult to model this for the whole globe. Here, we present a framework to combine a new satellite measurement "solar-induced chlorophyll fluorescence" with a global photosynthesis model. We then quantify how this new measurement constrains model uncertainties and find highly effective constraint. These results pave a novel pathway for improving estimates and modelling abilities of photosynthesis globally.
Alecia Nickless, Peter J. Rayner, Francois Engelbrecht, Ernst-Günther Brunke, Birgit Erni, and Robert J. Scholes
Atmos. Chem. Phys., 18, 4765–4801, https://doi.org/10.5194/acp-18-4765-2018, https://doi.org/10.5194/acp-18-4765-2018, 2018
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Carbon dioxide emissions and uptake were estimated for Cape Town, South Africa. We placed two high-precision analysers in lighthouses located on either end of Cape Town (Robben Island and Hangklip). The Cape Point GAW station provided background measurements. We were able to improve the agreement between modelled and observed concentrations, relative to initial estimates provided. This methodology could potentially be scaled up to provide monitoring and verification of city emissions.
Thomas Kaminski and Peter Julian Rayner
Biogeosciences, 14, 4755–4766, https://doi.org/10.5194/bg-14-4755-2017, https://doi.org/10.5194/bg-14-4755-2017, 2017
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Observations can reduce uncertainties in past, current, and predicted natural and anthropogenic CO2 fluxes. They provide independent information for verification of actions as requested by the Paris Agreement. Quantitative network design (QND) is an objective approach to optimise in situ networks and space missions to achieve an optimal use of the observational capabilities. We describe recent progress and advocate an integrated QND system that simultaneously evaluates multiple data streams.
Rhys Whitley, Jason Beringer, Lindsay B. Hutley, Gabriel Abramowitz, Martin G. De Kauwe, Bradley Evans, Vanessa Haverd, Longhui Li, Caitlin Moore, Youngryel Ryu, Simon Scheiter, Stanislaus J. Schymanski, Benjamin Smith, Ying-Ping Wang, Mathew Williams, and Qiang Yu
Biogeosciences, 14, 4711–4732, https://doi.org/10.5194/bg-14-4711-2017, https://doi.org/10.5194/bg-14-4711-2017, 2017
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This paper attempts to review some of the current challenges faced by the modelling community in simulating the behaviour of savanna ecosystems. We provide a particular focus on three dynamic processes (phenology, root-water access, and fire) that are characteristic of savannas, which we believe are not adequately represented in current-generation terrestrial biosphere models. We highlight reasons for these misrepresentations, possible solutions and a future direction for research in this area.
Marko Scholze, Michael Buchwitz, Wouter Dorigo, Luis Guanter, and Shaun Quegan
Biogeosciences, 14, 3401–3429, https://doi.org/10.5194/bg-14-3401-2017, https://doi.org/10.5194/bg-14-3401-2017, 2017
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This paper briefly reviews data assimilation techniques in carbon cycle data assimilation and the requirements of data assimilation systems on observations. We provide a non-exhaustive overview of current observations and their uncertainties for use in terrestrial carbon cycle data assimilation, focussing on relevant space-based observations.
Rachel M. Law, Tilo Ziehn, Richard J. Matear, Andrew Lenton, Matthew A. Chamberlain, Lauren E. Stevens, Ying-Ping Wang, Jhan Srbinovsky, Daohua Bi, Hailin Yan, and Peter F. Vohralik
Geosci. Model Dev., 10, 2567–2590, https://doi.org/10.5194/gmd-10-2567-2017, https://doi.org/10.5194/gmd-10-2567-2017, 2017
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The paper describes a version of the Australian Community Climate and Earth System Simulator that has been enabled to simulate the carbon cycle, which is designated ACCESS-ESM1. The model performance for pre-industrial conditions is assessed and land and ocean carbon fluxes are found to be simulated realistically.
Malte Meinshausen, Elisabeth Vogel, Alexander Nauels, Katja Lorbacher, Nicolai Meinshausen, David M. Etheridge, Paul J. Fraser, Stephen A. Montzka, Peter J. Rayner, Cathy M. Trudinger, Paul B. Krummel, Urs Beyerle, Josep G. Canadell, John S. Daniel, Ian G. Enting, Rachel M. Law, Chris R. Lunder, Simon O'Doherty, Ron G. Prinn, Stefan Reimann, Mauro Rubino, Guus J. M. Velders, Martin K. Vollmer, Ray H. J. Wang, and Ray Weiss
Geosci. Model Dev., 10, 2057–2116, https://doi.org/10.5194/gmd-10-2057-2017, https://doi.org/10.5194/gmd-10-2057-2017, 2017
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Climate change is primarily driven by human-induced increases of greenhouse gas (GHG) concentrations. Based on ongoing community efforts (e.g. AGAGE and NOAA networks, ice cores), this study presents historical concentrations of CO2, CH4, N2O and 40 other GHGs from year 0 to year 2014. The data is recommended as input for climate models for pre-industrial, historical runs under CMIP6. Global means, but also latitudinal by monthly surface concentration fields are provided.
Jeremy D. Silver and Charles S. Zender
Geosci. Model Dev., 10, 413–423, https://doi.org/10.5194/gmd-10-413-2017, https://doi.org/10.5194/gmd-10-413-2017, 2017
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Many modern scientific research projects generate large amounts of data. Storage space is valuable and may be limited; hence compression is vital. We tested different compression methods for large gridded data sets, assessing the space savings and the amount of precision lost. We found a general trade-off between precision and compression, with compression well-predicted by the entropy of the data set. A method introduced here proved to be a competitive archive format for gridded numerical data.
Yiqi Luo, Zheng Shi, Xingjie Lu, Jianyang Xia, Junyi Liang, Jiang Jiang, Ying Wang, Matthew J. Smith, Lifen Jiang, Anders Ahlström, Benito Chen, Oleksandra Hararuk, Alan Hastings, Forrest Hoffman, Belinda Medlyn, Shuli Niu, Martin Rasmussen, Katherine Todd-Brown, and Ying-Ping Wang
Biogeosciences, 14, 145–161, https://doi.org/10.5194/bg-14-145-2017, https://doi.org/10.5194/bg-14-145-2017, 2017
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Climate change is strongly regulated by land carbon cycle. However, we lack the ability to predict future land carbon sequestration. Here, we develop a novel framework for understanding what determines the direction and rate of future change in land carbon storage. The framework offers a suite of new approaches to revolutionize land carbon model evaluation and improvement.
Natasha MacBean, Philippe Peylin, Frédéric Chevallier, Marko Scholze, and Gregor Schürmann
Geosci. Model Dev., 9, 3569–3588, https://doi.org/10.5194/gmd-9-3569-2016, https://doi.org/10.5194/gmd-9-3569-2016, 2016
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Model projections of the response of the terrestrial biosphere to anthropogenic emissions are uncertain, in part due to unknown fixed parameters in a model. Data assimilation can address this by using observations to optimise these parameter values. Using multiple types of data is beneficial for constraining different model processes, but it can also pose challenges in a DA context. This paper demonstrates and discusses the issues involved using toy models and examples from existing literature.
Cathy M. Trudinger, Paul J. Fraser, David M. Etheridge, William T. Sturges, Martin K. Vollmer, Matt Rigby, Patricia Martinerie, Jens Mühle, David R. Worton, Paul B. Krummel, L. Paul Steele, Benjamin R. Miller, Johannes Laube, Francis S. Mani, Peter J. Rayner, Christina M. Harth, Emmanuel Witrant, Thomas Blunier, Jakob Schwander, Simon O'Doherty, and Mark Battle
Atmos. Chem. Phys., 16, 11733–11754, https://doi.org/10.5194/acp-16-11733-2016, https://doi.org/10.5194/acp-16-11733-2016, 2016
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Perfluorocarbons (PFCs) are potent, long-lived and mostly man-made greenhouse gases released to the atmosphere mainly during aluminium production and semiconductor manufacture. Here we present the first continuous histories of three PFCs from 1800 to 2014, derived from measurements of these PFCs in the atmosphere and in air bubbles in polar ice. The records show how human actions have affected these important greenhouse gases over the past century.
Philippe Peylin, Cédric Bacour, Natasha MacBean, Sébastien Leonard, Peter Rayner, Sylvain Kuppel, Ernest Koffi, Abdou Kane, Fabienne Maignan, Frédéric Chevallier, Philippe Ciais, and Pascal Prunet
Geosci. Model Dev., 9, 3321–3346, https://doi.org/10.5194/gmd-9-3321-2016, https://doi.org/10.5194/gmd-9-3321-2016, 2016
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The study describes a carbon cycle data assimilation system that uses satellite observations of vegetation activity, net ecosystem exchange of carbon and water at many sites and atmospheric CO2 concentrations, in order to optimize the parameters of the ORCHIDEE land surface model. The optimized model is able to fit all three data streams leading to a land carbon uptake similar to independent estimates, which opens new perspectives for better prediction of the land carbon balance.
Denis M. O'Brien, Igor N. Polonsky, Steven R. Utembe, and Peter J. Rayner
Atmos. Meas. Tech., 9, 4633–4654, https://doi.org/10.5194/amt-9-4633-2016, https://doi.org/10.5194/amt-9-4633-2016, 2016
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The accuracy with which emissions of CO2, CH4 and CO from a complex city can be estimated from geostationary orbit is assessed via numerical experiment. Sources of the gases, meteorology, clouds and aerosols over the city are simulated, as are spectra of reflected sunlight in absorption bands of the gases. Gas concentrations are estimated from the spectra, and source distributions from the concentrations. Comparison of estimated and true sources measures the accuracy of the observing system.
E. N. Koffi, P. Bergamaschi, U. Karstens, M. Krol, A. Segers, M. Schmidt, I. Levin, A. T. Vermeulen, R. E. Fisher, V. Kazan, H. Klein Baltink, D. Lowry, G. Manca, H. A. J. Meijer, J. Moncrieff, S. Pal, M. Ramonet, H. A. Scheeren, and A. G. Williams
Geosci. Model Dev., 9, 3137–3160, https://doi.org/10.5194/gmd-9-3137-2016, https://doi.org/10.5194/gmd-9-3137-2016, 2016
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We evaluate the capability of the TM5 model to reproduce observations of the boundary layer dynamics and the associated variability of trace gases close to the surface, using 222Rn. Focusing on the European scale, we compare the TM5 boundary layer heights with observations from radiosondes, lidar, and ceilometer. Furthermore, we compare TM5 simulations of 222Rn activity concentrations, using a novel, process-based 222Rn flux map over Europe, with 222Rn harmonized measurements from 10 stations.
Eva A. Kowalczyk, Lauren E. Stevens, Rachel M. Law, Ian N. Harman, Martin Dix, Charmaine N. Franklin, and Ying-Ping Wang
Geosci. Model Dev., 9, 2771–2791, https://doi.org/10.5194/gmd-9-2771-2016, https://doi.org/10.5194/gmd-9-2771-2016, 2016
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This paper compares two ACCESS model versions that differ only in their land surface scheme. Differences in the simulated present-day climate are attributed to differences in the representation of various land surface processes.
Rashid Rafique, Jianyang Xia, Oleksandra Hararuk, Ghassem R. Asrar, Guoyong Leng, Yingping Wang, and Yiqi Luo
Earth Syst. Dynam., 7, 649–658, https://doi.org/10.5194/esd-7-649-2016, https://doi.org/10.5194/esd-7-649-2016, 2016
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Traceability analysis was used to diagnose the causes of differences in simulating ecosystem carbon storage capacity between two land models: CLMA-CASA and CABLE. Results showed that the simulated ecosystem carbon storage capacity is largely influenced by the photosynthesis parameterization, residence time and organic matter decomposition.
Cindy Cressot, Isabelle Pison, Peter J. Rayner, Philippe Bousquet, Audrey Fortems-Cheiney, and Frédéric Chevallier
Atmos. Chem. Phys., 16, 9089–9108, https://doi.org/10.5194/acp-16-9089-2016, https://doi.org/10.5194/acp-16-9089-2016, 2016
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Several hypothesis have been made to attribute current trends in atmospheric methane to particular regions. In this context, this work aims at evaluating how well anomalies in methane emissions can be detected at the regional scale with currently available observing systems: two space-borne instruments and a surface network. Our results show that inter-annual analyses of methane emissions inferred by atmospheric inversions should always include an uncertainty assessment.
Peter Rayner, Anna M. Michalak, and Frédéric Chevallier
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmd-2016-148, https://doi.org/10.5194/gmd-2016-148, 2016
Revised manuscript not accepted
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Numerical models are among our most important tools for understanding and prediction. Models include quantities or equations that we cannot verify directly. We learn about these unknowns by comparing model output with observations and using some algorithm to improve the inputs. We show here that the many methods for doing this are special cases of underlying statistics. This provides a unified way of comparing and contrasting such methods.
Anna M. Ukkola, Andy J. Pitman, Mark Decker, Martin G. De Kauwe, Gab Abramowitz, Jatin Kala, and Ying-Ping Wang
Hydrol. Earth Syst. Sci., 20, 2403–2419, https://doi.org/10.5194/hess-20-2403-2016, https://doi.org/10.5194/hess-20-2403-2016, 2016
Rhys Whitley, Jason Beringer, Lindsay B. Hutley, Gab Abramowitz, Martin G. De Kauwe, Remko Duursma, Bradley Evans, Vanessa Haverd, Longhui Li, Youngryel Ryu, Benjamin Smith, Ying-Ping Wang, Mathew Williams, and Qiang Yu
Biogeosciences, 13, 3245–3265, https://doi.org/10.5194/bg-13-3245-2016, https://doi.org/10.5194/bg-13-3245-2016, 2016
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In this study we assess how well terrestrial biosphere models perform at predicting water and carbon cycling for savanna ecosystems. We apply our models to five savanna sites in Northern Australia and highlight key causes for model failure. Our assessment of model performance uses a novel benchmarking system that scores a model’s predictive ability based on how well it is utilizing its driving information. On average, we found the models as a group display only moderate levels of performance.
Xia Zhang, Kevin R. Gurney, Peter Rayner, David Baker, and Yu-ping Liu
Atmos. Chem. Phys., 16, 1907–1918, https://doi.org/10.5194/acp-16-1907-2016, https://doi.org/10.5194/acp-16-1907-2016, 2016
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This study presents a complete exploration of the space/time effect of time variations (diurnal, weekly, monthly) in fossil fuel emission on CO2 concentration. The paper identified rectifier effect at local to regional scale that is expected from fossil fuel emission and compared to biospheric rectification, and then extends the subject to column measurement. This study demonstrates the importance of considering sub-annual fossil fuel emissions on model simulation and related studies.
Y. P. Wang, J. Jiang, B. Chen-Charpentier, F. B. Agusto, A. Hastings, F. Hoffman, M. Rasmussen, M. J. Smith, K. Todd-Brown, Y. Wang, X. Xu, and Y. Q. Luo
Biogeosciences, 13, 887–902, https://doi.org/10.5194/bg-13-887-2016, https://doi.org/10.5194/bg-13-887-2016, 2016
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Comparing two nonlinear microbial models, we found that,
in response to warming, soil C decreases in one model but can increase or decrease in the other model, and sensitivity of priming response to carbon input increases with soil T in one model but decreases in the other model
Significance: these differences in the responses can be used to discern which model is more realistic, which will improve our understanding of the significance of soil microbial processes in the terrestrial C cycle.
T. Ziehn, R. M. Law, P. J. Rayner, and G. Roff
Geosci. Instrum. Method. Data Syst., 5, 1–15, https://doi.org/10.5194/gi-5-1-2016, https://doi.org/10.5194/gi-5-1-2016, 2016
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This study investigates the optimal location of greenhouse gas (GHG) measurement stations in Australia in order to derive GHG flux estimates from concentration measurements. We find that an optimal network designed for CO2 also performs well for other GHGs such as CH4 and N2O due to large similarities in the flux pattern for each of the three GHGs. Economic costs (i.e. maintenance costs) can be halved by selecting stations closer to the base laboratory with only a slight decrease in performance.
M. G. De Kauwe, S.-X. Zhou, B. E. Medlyn, A. J. Pitman, Y.-P. Wang, R. A. Duursma, and I. C. Prentice
Biogeosciences, 12, 7503–7518, https://doi.org/10.5194/bg-12-7503-2015, https://doi.org/10.5194/bg-12-7503-2015, 2015
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Future climate change has the potential to increase drought in many regions of the globe. Recent data syntheses show that drought sensitivity varies considerably among plants from different climate zones, but state-of-the-art models currently assume the same drought sensitivity for all vegetation. Our results indicate that models will over-estimate drought impacts in drier climates unless different sensitivity of vegetation to drought is taken into account.
J. Kala, M. G. De Kauwe, A. J. Pitman, R. Lorenz, B. E. Medlyn, Y.-P Wang, Y.-S Lin, and G. Abramowitz
Geosci. Model Dev., 8, 3877–3889, https://doi.org/10.5194/gmd-8-3877-2015, https://doi.org/10.5194/gmd-8-3877-2015, 2015
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We implement a new stomatal conductance scheme within a land surface model coupled to a global climate model. The new model differs from the default in that it allows model parameters to vary by the different plant functional types, derived from global synthesis of observations. We show that the new scheme results in improvements in the model climatology and improves existing biases in warm temperature extremes by up to 10-20% over the boreal forests during summer.
E. N. Koffi, P. J. Rayner, A. J. Norton, C. Frankenberg, and M. Scholze
Biogeosciences, 12, 4067–4084, https://doi.org/10.5194/bg-12-4067-2015, https://doi.org/10.5194/bg-12-4067-2015, 2015
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We investigate the utility of satellite measurements of solar-induced chlorophyll fluorescence (SIF) in constraining gross primary productivity (GPP). We simulate SIF with the biosphere model BETHY coupled with the fluorescence model SCOPE. The model simulates well the patterns of SIF. SIF is sensitive to leaf chlorophyll and incoming radiation but not to the key physiological parameter Vcmax controlling GPP. Thus, further model development is necessary before SIF can be used to constrain GPP.
S. Crowell, P. Rayner, S. Zaccheo, and B. Moore
Atmos. Meas. Tech., 8, 2685–2697, https://doi.org/10.5194/amt-8-2685-2015, https://doi.org/10.5194/amt-8-2685-2015, 2015
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We derive a yes/no requirement for the usefulness of an O2 lidar as part of the ASCENDS mission that incorporates errors due to atmospheric state misspecification as well as instrumental noise. We find that the larger the CO2 instrument's sensitivity to surface pressure errors, the lower the precision requirement for the O2 instrument to be useful. In particular, the 2um CO2 instrument would benefit the most from the inclusion of an O2 lidar with high precision retrievals of surface pressure.
K. M. Hansen, J. H. Christensen, C. Geels, J. D. Silver, and J. Brandt
Atmos. Chem. Phys., 15, 6549–6559, https://doi.org/10.5194/acp-15-6549-2015, https://doi.org/10.5194/acp-15-6549-2015, 2015
I. C. Prentice, X. Liang, B. E. Medlyn, and Y.-P. Wang
Atmos. Chem. Phys., 15, 5987–6005, https://doi.org/10.5194/acp-15-5987-2015, https://doi.org/10.5194/acp-15-5987-2015, 2015
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Land surface models (LSMs) describe how carbon and water fluxes react to environmental change. They are key component of climate models, yet they differ enormously. Many perform poorly, despite having many parameters. We outline a development strategy emphasizing robustness, reliability and realism, none of which is guaranteed by complexity alone. We propose multiple constraints, benchmarking and data assimilation, and representing unresolved processes stochastically, as tools in this endeavour.
C. Le Quéré, R. Moriarty, R. M. Andrew, G. P. Peters, P. Ciais, P. Friedlingstein, S. D. Jones, S. Sitch, P. Tans, A. Arneth, T. A. Boden, L. Bopp, Y. Bozec, J. G. Canadell, L. P. Chini, F. Chevallier, C. E. Cosca, I. Harris, M. Hoppema, R. A. Houghton, J. I. House, A. K. Jain, T. Johannessen, E. Kato, R. F. Keeling, V. Kitidis, K. Klein Goldewijk, C. Koven, C. S. Landa, P. Landschützer, A. Lenton, I. D. Lima, G. Marland, J. T. Mathis, N. Metzl, Y. Nojiri, A. Olsen, T. Ono, S. Peng, W. Peters, B. Pfeil, B. Poulter, M. R. Raupach, P. Regnier, C. Rödenbeck, S. Saito, J. E. Salisbury, U. Schuster, J. Schwinger, R. Séférian, J. Segschneider, T. Steinhoff, B. D. Stocker, A. J. Sutton, T. Takahashi, B. Tilbrook, G. R. van der Werf, N. Viovy, Y.-P. Wang, R. Wanninkhof, A. Wiltshire, and N. Zeng
Earth Syst. Sci. Data, 7, 47–85, https://doi.org/10.5194/essd-7-47-2015, https://doi.org/10.5194/essd-7-47-2015, 2015
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Carbon dioxide (CO2) emissions from human activities (burning fossil fuels and cement production, deforestation and other land-use change) are set to rise again in 2014.
This study (updated yearly) makes an accurate assessment of anthropogenic CO2 emissions and their redistribution between the atmosphere, ocean, and terrestrial biosphere in order to better understand the global carbon cycle, support the development of climate policies, and project future climate change.
A. Nickless, T. Ziehn, P.J. Rayner, R.J. Scholes, and F. Engelbrecht
Atmos. Chem. Phys., 15, 2051–2069, https://doi.org/10.5194/acp-15-2051-2015, https://doi.org/10.5194/acp-15-2051-2015, 2015
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This study aims to provide an optimal network design for the placement of new atmospheric monitoring stations around South Africa, to best estimate the emission and uptake of carbon dioxide fluxes due to both anthropogenic and natural sources. In addition, a sensitivity analysis was performed on the impact that certain parameters would have on the final network solution, considering the inverse modelling framework, the transport model and the use of a different optimisation routine.
M. G. De Kauwe, J. Kala, Y.-S. Lin, A. J. Pitman, B. E. Medlyn, R. A. Duursma, G. Abramowitz, Y.-P. Wang, and D. G. Miralles
Geosci. Model Dev., 8, 431–452, https://doi.org/10.5194/gmd-8-431-2015, https://doi.org/10.5194/gmd-8-431-2015, 2015
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Stomatal conductance affects the fluxes of carbon, energy and water between the vegetated land surface and the atmosphere. We test an implementation of an optimal stomatal conductance model within the CABLE land surface model (LSM). The new implementation resulted in a large reduction in the annual fluxes of transpiration across evergreen needleleaf, tundra and C4 grass regions. We conclude that optimisation theory can yield a tractable approach to predicting stomatal conductance in LSMs.
P. J. Rayner, A. Stavert, M. Scholze, A. Ahlström, C. E. Allison, and R. M. Law
Biogeosciences, 12, 835–844, https://doi.org/10.5194/bg-12-835-2015, https://doi.org/10.5194/bg-12-835-2015, 2015
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Recent papers suggest a slow-down in the natural uptake of
anthropogenic CO2. We analyse recent trends in atmospheric concentration and
known inputs to test for such a slow-down. We see, rather, an increase
in uptake compared to a simple response to changing CO2 concentration. Using atmospheric models and statistical techniques we isolate this increased uptake to the northern temperate and boreal continents during summer, suggesting a stronger growing season.
S. R. Utembe, N. Jones, P. J. Rayner, I. Genkova, D. W. T. Griffith, D. M. O'Brien, C. Lunney, and A. J. Clark
Atmos. Chem. Phys. Discuss., https://doi.org/10.5194/acpd-14-31551-2014, https://doi.org/10.5194/acpd-14-31551-2014, 2014
Revised manuscript not accepted
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A methodology to estimate CO2 emissions from an isolated power plant
is presented and illustrated for a power station in South Australia. It involves measurement of in-situ and column-averaged CO2 near the power plant, forward modelling of the observed signals (using WRF-Chem) and inverse modelling to obtain an estimate of the power plant fluxes. Better simulation is obtained for column data giving better estimates of fluxes. Our estimated emissions are within 6% of the reported values.
X. Zhang, K. R. Gurney, P. Rayner, Y. Liu, and S. Asefi-Najafabady
Geosci. Model Dev., 7, 2867–2874, https://doi.org/10.5194/gmd-7-2867-2014, https://doi.org/10.5194/gmd-7-2867-2014, 2014
P. J. Rayner, S. R. Utembe, and S. Crowell
Atmos. Meas. Tech., 7, 3285–3293, https://doi.org/10.5194/amt-7-3285-2014, https://doi.org/10.5194/amt-7-3285-2014, 2014
T. Ziehn, A. Nickless, P. J. Rayner, R. M. Law, G. Roff, and P. Fraser
Atmos. Chem. Phys., 14, 9363–9378, https://doi.org/10.5194/acp-14-9363-2014, https://doi.org/10.5194/acp-14-9363-2014, 2014
S. Kemp, M. Scholze, T. Ziehn, and T. Kaminski
Geosci. Model Dev., 7, 1609–1619, https://doi.org/10.5194/gmd-7-1609-2014, https://doi.org/10.5194/gmd-7-1609-2014, 2014
P. Ciais, A. J. Dolman, A. Bombelli, R. Duren, A. Peregon, P. J. Rayner, C. Miller, N. Gobron, G. Kinderman, G. Marland, N. Gruber, F. Chevallier, R. J. Andres, G. Balsamo, L. Bopp, F.-M. Bréon, G. Broquet, R. Dargaville, T. J. Battin, A. Borges, H. Bovensmann, M. Buchwitz, J. Butler, J. G. Canadell, R. B. Cook, R. DeFries, R. Engelen, K. R. Gurney, C. Heinze, M. Heimann, A. Held, M. Henry, B. Law, S. Luyssaert, J. Miller, T. Moriyama, C. Moulin, R. B. Myneni, C. Nussli, M. Obersteiner, D. Ojima, Y. Pan, J.-D. Paris, S. L. Piao, B. Poulter, S. Plummer, S. Quegan, P. Raymond, M. Reichstein, L. Rivier, C. Sabine, D. Schimel, O. Tarasova, R. Valentini, R. Wang, G. van der Werf, D. Wickland, M. Williams, and C. Zehner
Biogeosciences, 11, 3547–3602, https://doi.org/10.5194/bg-11-3547-2014, https://doi.org/10.5194/bg-11-3547-2014, 2014
Y. P. Wang, B. C. Chen, W. R. Wieder, M. Leite, B. E. Medlyn, M. Rasmussen, M. J. Smith, F. B. Agusto, F. Hoffman, and Y. Q. Luo
Biogeosciences, 11, 1817–1831, https://doi.org/10.5194/bg-11-1817-2014, https://doi.org/10.5194/bg-11-1817-2014, 2014
J.-F. Exbrayat, A. J. Pitman, Q. Zhang, G. Abramowitz, and Y.-P. Wang
Biogeosciences, 10, 7095–7108, https://doi.org/10.5194/bg-10-7095-2013, https://doi.org/10.5194/bg-10-7095-2013, 2013
P. Peylin, R. M. Law, K. R. Gurney, F. Chevallier, A. R. Jacobson, T. Maki, Y. Niwa, P. K. Patra, W. Peters, P. J. Rayner, C. Rödenbeck, I. T. van der Laan-Luijkx, and X. Zhang
Biogeosciences, 10, 6699–6720, https://doi.org/10.5194/bg-10-6699-2013, https://doi.org/10.5194/bg-10-6699-2013, 2013
Q. Zhang, A. J. Pitman, Y. P. Wang, Y. J. Dai, and P. J. Lawrence
Earth Syst. Dynam., 4, 333–345, https://doi.org/10.5194/esd-4-333-2013, https://doi.org/10.5194/esd-4-333-2013, 2013
J. Brandt, J. D. Silver, J. H. Christensen, M. S. Andersen, J. H. Bønløkke, T. Sigsgaard, C. Geels, A. Gross, A. B. Hansen, K. M. Hansen, G. B. Hedegaard, E. Kaas, and L. M. Frohn
Atmos. Chem. Phys., 13, 7725–7746, https://doi.org/10.5194/acp-13-7725-2013, https://doi.org/10.5194/acp-13-7725-2013, 2013
J. Brandt, J. D. Silver, J. H. Christensen, M. S. Andersen, J. H. Bønløkke, T. Sigsgaard, C. Geels, A. Gross, A. B. Hansen, K. M. Hansen, G. B. Hedegaard, E. Kaas, and L. M. Frohn
Atmos. Chem. Phys., 13, 7747–7764, https://doi.org/10.5194/acp-13-7747-2013, https://doi.org/10.5194/acp-13-7747-2013, 2013
E. Solazzo, R. Bianconi, G. Pirovano, M. D. Moran, R. Vautard, C. Hogrefe, K. W. Appel, V. Matthias, P. Grossi, B. Bessagnet, J. Brandt, C. Chemel, J. H. Christensen, R. Forkel, X. V. Francis, A. B. Hansen, S. McKeen, U. Nopmongcol, M. Prank, K. N. Sartelet, A. Segers, J. D. Silver, G. Yarwood, J. Werhahn, J. Zhang, S. T. Rao, and S. Galmarini
Geosci. Model Dev., 6, 791–818, https://doi.org/10.5194/gmd-6-791-2013, https://doi.org/10.5194/gmd-6-791-2013, 2013
S. M. Burrows, P. J. Rayner, T. Butler, and M. G. Lawrence
Atmos. Chem. Phys., 13, 5473–5488, https://doi.org/10.5194/acp-13-5473-2013, https://doi.org/10.5194/acp-13-5473-2013, 2013
C. M. Trudinger, I. G. Enting, P. J. Rayner, D. M. Etheridge, C. Buizert, M. Rubino, P. B. Krummel, and T. Blunier
Atmos. Chem. Phys., 13, 1485–1510, https://doi.org/10.5194/acp-13-1485-2013, https://doi.org/10.5194/acp-13-1485-2013, 2013
Related subject area
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Seasonality and synchrony of photosynthesis in African forests inferred from spaceborne chlorophyll fluorescence and vegetation indices
Precipitation–fire functional interactions control biomass stocks and carbon exchanges across the world's largest savanna
Nitrogen concentrations in boreal and temperate tree tissues vary with tree age/size, growth rate, and climate
Burn severity and vegetation type control phosphorus concentration, molecular composition, and mobilization
Comparison of shortwave radiation dynamics between boreal forest and open peatland pairs in southern and northern Finland
Cropland expansion drives vegetation greenness decline in Southeast Asia
How to measure the efficiency of bioenergy crops compared to forestation
Implications of climate and litter quality for simulations of litterbag decomposition at high latitudes
Soil carbon-concentration and carbon-climate feedbacks in CMIP6 Earth system models
Monitoring the impact of forest changes on carbon uptake with solar-induced fluorescence measurements from GOME-2A and TROPOMI for an Australian and Chinese case study
Technical note: Flagging inconsistencies in flux tower data
Relevance of near-surface soil moisture vs. terrestrial water storage for global vegetation functioning
High-resolution spatial patterns and drivers of terrestrial ecosystem carbon dioxide, methane, and nitrous oxide fluxes in the tundra
Long-term additions of ammonium nitrate to montane forest ecosystems may cause limited soil acidification, even in the presence of soil carbonate
Leaf carbon and nitrogen stoichiometric variation along environmental gradients
Gross primary productivity and the predictability of CO2: more uncertainty in what we predict than how well we predict it
Scale variance in the carbon dynamics of fragmented, mixed-use landscapes estimated using model–data fusion
Seasonal controls override forest harvesting effects on the composition of dissolved organic matter mobilized from boreal forest soil organic horizons
Carbon cycle extremes accelerate weakening of the land carbon sink in the late 21st century
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Assessing the sensitivity of multi-frequency passive microwave vegetation optical depth to vegetation properties
Seasonal variation of mercury concentration of ancient olive groves of Lebanon
Soil organic matter diagenetic state informs boreal forest ecosystem feedbacks to climate change
Upscaling dryland carbon and water fluxes with artificial neural networks of optical, thermal, and microwave satellite remote sensing
Sun-induced fluorescence as a proxy for primary productivity across vegetation types and climates
Technical note: A view from space on global flux towers by MODIS and Landsat: the FluxnetEO data set
Changing sub-Arctic tundra vegetation upon permafrost degradation: impact on foliar mineral element cycling
Land Management Contributes significantly to observed Vegetation Browning in Syria during 2001–2018
MODIS Vegetation Continuous Fields tree cover needs calibrating in tropical savannas
Assessing the representation of the Australian carbon cycle in global vegetation models
Assessing the response of soil carbon in Australia to changing inputs and climate using a consistent modelling framework
Reviews and syntheses: Ongoing and emerging opportunities to improve environmental science using observations from the Advanced Baseline Imager on the Geostationary Operational Environmental Satellites
First pan-Arctic assessment of dissolved organic carbon in lakes of the permafrost region
The impact of wildfire on biogeochemical fluxes and water quality in boreal catchments
Examining the sensitivity of the terrestrial carbon cycle to the expression of El Niño
Subalpine grassland productivity increased with warmer and drier conditions, but not with higher N deposition, in an altitudinal transplantation experiment
Reviews and syntheses: Impacts of plant-silica–herbivore interactions on terrestrial biogeochemical cycling
Implementation of nitrogen cycle in the CLASSIC land model
Combined effects of ozone and drought stress on the emission of biogenic volatile organic compounds from Quercus robur L.
A bottom-up quantification of foliar mercury uptake fluxes across Europe
Lagged effects regulate the inter-annual variability of the tropical carbon balance
Spatial variations in terrestrial net ecosystem productivity and its local indicators
Nitrogen cycling in CMIP6 land surface models: progress and limitations
Decomposing reflectance spectra to track gross primary production in a subalpine evergreen forest
Sensitivity of 21st century simulated ecosystem indicators to model parameters, prescribed climate drivers, RCP scenarios and forest management actions for two Finnish boreal forest sites
Summarizing the state of the terrestrial biosphere in few dimensions
Patterns and trends of the dominant environmental controls of net biome productivity
Localized basal area affects soil respiration temperature sensitivity in a coastal deciduous forest
Dissolved organic carbon mobilized from organic horizons of mature and harvested black spruce plots in a mesic boreal region
Ideas and perspectives: Proposed best practices for collaboration at cross-disciplinary observatories
Russell Doughty, Michael C. Wimberly, Dan Wanyama, Helene Peiro, Nicholas Parazoo, Sean Crowell, and Moses Azong Cho
Biogeosciences, 22, 1985–2004, https://doi.org/10.5194/bg-22-1985-2025, https://doi.org/10.5194/bg-22-1985-2025, 2025
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We find West African solar-induced fluorescence (SIF) increases during the dry season and peaks before precipitation, similar to the Amazon. In central Africa, a continental-scale bimodal SIF seasonality appears; its minimum aligns with precipitation, but its maximum seems less environmentally driven. Notably, differences between SIF and vegetation index (VI) seasonality indicate VI-based photosynthesis estimates may be inaccurate.
Mathew Williams, David T. Milodowski, T. Luke Smallman, Kyle G. Dexter, Gabi C. Hegerl, Iain M. McNicol, Michael O'Sullivan, Carla M. Roesch, Casey M. Ryan, Stephen Sitch, and Aude Valade
Biogeosciences, 22, 1597–1614, https://doi.org/10.5194/bg-22-1597-2025, https://doi.org/10.5194/bg-22-1597-2025, 2025
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Southern African woodlands are important in both regional and global carbon cycles. A new carbon analysis created by combining satellite data with ecosystem modelling shows that the region has a neutral C balance overall but with important spatial variations. Patterns of biomass and C balance across the region are the outcome of climate controls on production and vegetation–fire interactions, which determine the mortality of vegetation and spatial variations in vegetation function.
Martin Thurner, Kailiang Yu, Stefano Manzoni, Anatoly Prokushkin, Melanie A. Thurner, Zhiqiang Wang, and Thomas Hickler
Biogeosciences, 22, 1475–1493, https://doi.org/10.5194/bg-22-1475-2025, https://doi.org/10.5194/bg-22-1475-2025, 2025
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Nitrogen concentrations in tree tissues (leaves, branches, stems, and roots) are related to photosynthesis, growth, and respiration and thus to vegetation carbon uptake. Our novel database allows us to identify the controls of tree tissue nitrogen concentrations in boreal and temperate forests, such as tree age/size, species, and climate. Changes therein will affect tissue nitrogen concentrations and thus also vegetation carbon uptake.
Morgan E. Barnes, Jesse Alan Roebuck Jr., Samantha Grieger, Paul J. Aronstein, Vanessa A. Garayburu-Caruso, Kathleen Munson, Robert P. Young, Kevin D. Bladon, John D. Bailey, Emily B. Graham, Lupita Renteria, Peggy A. O'Day, Timothy D. Scheibe, and Allison N. Myers-Pigg
EGUsphere, https://doi.org/10.5194/egusphere-2025-21, https://doi.org/10.5194/egusphere-2025-21, 2025
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Wildfires impact nutrient cycles on land and in water. We used burning experiments to understand the types of phosphorous (P), an essential nutrient, that might be released to the environment after different types of fires. We found that the amount of P moving through the environment post-fire is dependent on the type of vegetation and degree of burning which may influence when and where this material is processed or stored.
Otso Peräkylä, Erkka Rinne, Ekaterina Ezhova, Anna Lintunen, Annalea Lohila, Juho Aalto, Mika Aurela, Pasi Kolari, and Markku Kulmala
Biogeosciences, 22, 153–179, https://doi.org/10.5194/bg-22-153-2025, https://doi.org/10.5194/bg-22-153-2025, 2025
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Forests are seen as good for climate. Yet, in areas with snow, trees break up the white snow surface and absorb more sunlight than open areas. This has a warming effect, negating some of the climate benefit of trees. We studied two site pairs in Finland, both with an open peatland and a forest. We found that the later the snow melts, the more extra energy the forest absorbs as compared to the peatland. This has implications for the future, as snow cover duration is affected by global warming.
Ruiying Zhao, Xiangzhong Luo, Yuheng Yang, Luri Nurlaila Syahid, Chi Chen, and Janice Ser Huay Lee
Biogeosciences, 21, 5393–5406, https://doi.org/10.5194/bg-21-5393-2024, https://doi.org/10.5194/bg-21-5393-2024, 2024
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Southeast Asia has been a global hot spot of land-use change over the past 50 years. Meanwhile, it also hosts some of the most carbon-dense and diverse ecosystems in the world. Here, we explore the impact of land-use change, along with other environmental factors, on the ecosystem in Southeast Asia. We find that elevated CO2 imposed a positive impact on vegetation greenness, but the positive impact was largely offset by intensive land-use changes in the region, particularly cropland expansion.
Sabine Egerer, Stefanie Falk, Dorothea Mayer, Tobias Nützel, Wolfgang A. Obermeier, and Julia Pongratz
Biogeosciences, 21, 5005–5025, https://doi.org/10.5194/bg-21-5005-2024, https://doi.org/10.5194/bg-21-5005-2024, 2024
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Using a state-of-the-art land model, we find that bioenergy plants can store carbon more efficiently than forests over long periods in the soil, in geological reservoirs, or by substituting fossil-fuel-based energy. Planting forests is more suitable for reaching climate targets by 2050. The carbon removal potential depends also on local environmental conditions. These considerations have important implications for climate policy, spatial planning, nature conservation, and agriculture.
Elin Ristorp Aas, Inge Althuizen, Hui Tang, Sonya Geange, Eva Lieungh, Vigdis Vandvik, and Terje Koren Berntsen
Biogeosciences, 21, 3789–3817, https://doi.org/10.5194/bg-21-3789-2024, https://doi.org/10.5194/bg-21-3789-2024, 2024
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We used a soil model to replicate two litterbag decomposition experiments to examine the implications of climate, litter quality, and soil microclimate representation. We found that macroclimate was more important than litter quality for modeled mass loss. By comparing different representations of soil temperature and moisture we found that using observed data did not improve model results. We discuss causes for this and suggest possible improvements to both the model and experimental design.
Rebecca M. Varney, Pierre Friedlingstein, Sarah E. Chadburn, Eleanor J. Burke, and Peter M. Cox
Biogeosciences, 21, 2759–2776, https://doi.org/10.5194/bg-21-2759-2024, https://doi.org/10.5194/bg-21-2759-2024, 2024
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Soil carbon is the largest store of carbon on the land surface of Earth and is known to be particularly sensitive to climate change. Understanding this future response is vital to successfully meeting Paris Agreement targets, which rely heavily on carbon uptake by the land surface. In this study, the individual responses of soil carbon are quantified and compared amongst CMIP6 Earth system models used within the most recent IPCC report, and the role of soils in the land response is highlighted.
Juliëtte C. S. Anema, Klaas Folkert Boersma, Piet Stammes, Gerbrand Koren, William Woodgate, Philipp Köhler, Christian Frankenberg, and Jacqui Stol
Biogeosciences, 21, 2297–2311, https://doi.org/10.5194/bg-21-2297-2024, https://doi.org/10.5194/bg-21-2297-2024, 2024
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To keep the Paris agreement goals within reach, negative emissions are necessary. They can be achieved with mitigation techniques, such as reforestation, which remove CO2 from the atmosphere. While governments have pinned their hopes on them, there is not yet a good set of tools to objectively determine whether negative emissions do what they promise. Here we show how satellite measurements of plant fluorescence are useful in detecting carbon uptake due to reforestation and vegetation regrowth.
Martin Jung, Jacob Nelson, Mirco Migliavacca, Tarek El-Madany, Dario Papale, Markus Reichstein, Sophia Walther, and Thomas Wutzler
Biogeosciences, 21, 1827–1846, https://doi.org/10.5194/bg-21-1827-2024, https://doi.org/10.5194/bg-21-1827-2024, 2024
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We present a methodology to detect inconsistencies in perhaps the most important data source for measurements of ecosystem–atmosphere carbon, water, and energy fluxes. We expect that the derived consistency flags will be relevant for data users and will help in improving our understanding of and our ability to model ecosystem–climate interactions.
Prajwal Khanal, Anne J. Hoek Van Dijke, Timo Schaffhauser, Wantong Li, Sinikka J. Paulus, Chunhui Zhan, and René Orth
Biogeosciences, 21, 1533–1547, https://doi.org/10.5194/bg-21-1533-2024, https://doi.org/10.5194/bg-21-1533-2024, 2024
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Water availability is essential for vegetation functioning, but the depth of vegetation water uptake is largely unknown due to sparse ground measurements. This study correlates vegetation growth with soil moisture availability globally to infer vegetation water uptake depth using only satellite-based data. We find that the vegetation water uptake depth varies across climate regimes and vegetation types and also changes during dry months at a global scale.
Anna-Maria Virkkala, Pekka Niittynen, Julia Kemppinen, Maija E. Marushchak, Carolina Voigt, Geert Hensgens, Johanna Kerttula, Konsta Happonen, Vilna Tyystjärvi, Christina Biasi, Jenni Hultman, Janne Rinne, and Miska Luoto
Biogeosciences, 21, 335–355, https://doi.org/10.5194/bg-21-335-2024, https://doi.org/10.5194/bg-21-335-2024, 2024
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Arctic greenhouse gas (GHG) fluxes of CO2, CH4, and N2O are important for climate feedbacks. We combined extensive in situ measurements and remote sensing data to develop machine-learning models to predict GHG fluxes at a 2 m resolution across a tundra landscape. The analysis revealed that the system was a net GHG sink and showed widespread CH4 uptake in upland vegetation types, almost surpassing the high wetland CH4 emissions at the landscape scale.
Thomas Baer, Gerhard Furrer, Stephan Zimmermann, and Patrick Schleppi
Biogeosciences, 20, 4577–4589, https://doi.org/10.5194/bg-20-4577-2023, https://doi.org/10.5194/bg-20-4577-2023, 2023
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Nitrogen (N) deposition to forest ecosystems is a matter of concern because it affects their nutrient status and makes their soil acidic. We observed an ongoing acidification in a montane forest in central Switzerland even if the subsoil of this site contains carbonates and is thus well buffered. We experimentally added N to simulate a higher pollution, and this increased the acidification. After 25 years of study, however, we can see the first signs of recovery, also under higher N deposition.
Huiying Xu, Han Wang, Iain Colin Prentice, and Sandy P. Harrison
Biogeosciences, 20, 4511–4525, https://doi.org/10.5194/bg-20-4511-2023, https://doi.org/10.5194/bg-20-4511-2023, 2023
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Leaf carbon (C) and nitrogen (N) are crucial elements in leaf construction and physiological processes. This study reconciled the roles of phylogeny, species identity, and climate in stoichiometric traits at individual and community levels. The variations in community-level leaf N and C : N ratio were captured by optimality-based models using climate data. Our results provide an approach to improve the representation of leaf stoichiometry in vegetation models to better couple N with C cycling.
István Dunkl, Nicole Lovenduski, Alessio Collalti, Vivek K. Arora, Tatiana Ilyina, and Victor Brovkin
Biogeosciences, 20, 3523–3538, https://doi.org/10.5194/bg-20-3523-2023, https://doi.org/10.5194/bg-20-3523-2023, 2023
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Despite differences in the reproduction of gross primary productivity (GPP) by Earth system models (ESMs), ESMs have similar predictability of the global carbon cycle. We found that, although GPP variability originates from different regions and is driven by different climatic variables across the ESMs, the ESMs rely on the same mechanisms to predict their own GPP. This shows that the predictability of the carbon cycle is limited by our understanding of variability rather than predictability.
David T. Milodowski, T. Luke Smallman, and Mathew Williams
Biogeosciences, 20, 3301–3327, https://doi.org/10.5194/bg-20-3301-2023, https://doi.org/10.5194/bg-20-3301-2023, 2023
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Model–data fusion (MDF) allows us to combine ecosystem models with Earth observation data. Fragmented landscapes, with a mosaic of contrasting ecosystems, pose a challenge for MDF. We develop a novel MDF framework to estimate the carbon balance of fragmented landscapes and show the importance of accounting for ecosystem heterogeneity to prevent scale-dependent bias in estimated carbon fluxes, disturbance fluxes in particular, and to improve ecological fidelity of the calibrated models.
Keri L. Bowering, Kate A. Edwards, and Susan E. Ziegler
Biogeosciences, 20, 2189–2206, https://doi.org/10.5194/bg-20-2189-2023, https://doi.org/10.5194/bg-20-2189-2023, 2023
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Dissolved organic matter (DOM) mobilized from surface soils is a source of carbon (C) for deeper mineral horizons but also a mechanism of C loss. Composition of DOM mobilized in boreal forests varied more by season than as a result of forest harvesting. Results suggest reduced snowmelt and increased fall precipitation enhance DOM properties promoting mineral soil C stores. These findings, coupled with hydrology, can inform on soil C fate and boreal forest C balance in response to climate change.
Bharat Sharma, Jitendra Kumar, Auroop R. Ganguly, and Forrest M. Hoffman
Biogeosciences, 20, 1829–1841, https://doi.org/10.5194/bg-20-1829-2023, https://doi.org/10.5194/bg-20-1829-2023, 2023
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Rising atmospheric carbon dioxide increases vegetation growth and causes more heatwaves and droughts. The impact of such climate extremes is detrimental to terrestrial carbon uptake capacity. We found that due to overall climate warming, about 88 % of the world's regions towards the end of 2100 will show anomalous losses in net biospheric productivity (NBP) rather than gains. More than 50 % of all negative NBP extremes were driven by the compound effect of dry, hot, and fire conditions.
Britta Greenshields, Barbara von der Lühe, Felix Schwarz, Harold J. Hughes, Aiyen Tjoa, Martyna Kotowska, Fabian Brambach, and Daniela Sauer
Biogeosciences, 20, 1259–1276, https://doi.org/10.5194/bg-20-1259-2023, https://doi.org/10.5194/bg-20-1259-2023, 2023
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Silicon (Si) can have multiple beneficial effects on crops such as oil palms. In this study, we quantified Si concentrations in various parts of an oil palm (leaflets, rachises, fruit-bunch parts) to derive Si storage estimates for the total above-ground biomass of an oil palm and 1 ha of an oil-palm plantation. We proposed a Si balance by identifying Si return (via palm fronds) and losses (via harvest) in the system and recommend management measures that enhance Si cycling.
Luisa Schmidt, Matthias Forkel, Ruxandra-Maria Zotta, Samuel Scherrer, Wouter A. Dorigo, Alexander Kuhn-Régnier, Robin van der Schalie, and Marta Yebra
Biogeosciences, 20, 1027–1046, https://doi.org/10.5194/bg-20-1027-2023, https://doi.org/10.5194/bg-20-1027-2023, 2023
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Vegetation attenuates natural microwave emissions from the land surface. The strength of this attenuation is quantified as the vegetation optical depth (VOD) parameter and is influenced by the vegetation mass, structure, water content, and observation wavelength. Here we model the VOD signal as a multi-variate function of several descriptive vegetation variables. The results help in understanding the effects of ecosystem properties on VOD.
Nagham Tabaja, David Amouroux, Lamis Chalak, François Fourel, Emmanuel Tessier, Ihab Jomaa, Milad El Riachy, and Ilham Bentaleb
Biogeosciences, 20, 619–633, https://doi.org/10.5194/bg-20-619-2023, https://doi.org/10.5194/bg-20-619-2023, 2023
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This study investigates the seasonality of the mercury (Hg) concentration of olive trees. Hg concentrations of foliage, stems, soil surface, and litter were analyzed on a monthly basis in ancient olive trees growing in two groves in Lebanon. Our study draws an adequate baseline for the eastern Mediterranean and for the region with similar climatic inventories on Hg vegetation uptake in addition to being a baseline for new studies on olive trees in the Mediterranean.
Allison N. Myers-Pigg, Karl Kaiser, Ronald Benner, and Susan E. Ziegler
Biogeosciences, 20, 489–503, https://doi.org/10.5194/bg-20-489-2023, https://doi.org/10.5194/bg-20-489-2023, 2023
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Boreal forests, historically a global sink for atmospheric CO2, store carbon in vast soil reservoirs. To predict how such stores will respond to climate warming we need to understand climate–ecosystem feedbacks. We find boreal forest soil carbon stores are maintained through enhanced nitrogen cycling with climate warming, providing direct evidence for a key feedback. Further application of the approach demonstrated here will improve our understanding of the limits of climate–ecosystem feedbacks.
Matthew P. Dannenberg, Mallory L. Barnes, William K. Smith, Miriam R. Johnston, Susan K. Meerdink, Xian Wang, Russell L. Scott, and Joel A. Biederman
Biogeosciences, 20, 383–404, https://doi.org/10.5194/bg-20-383-2023, https://doi.org/10.5194/bg-20-383-2023, 2023
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Earth's drylands provide ecosystem services to many people and will likely be strongly affected by climate change, but it is quite challenging to monitor the productivity and water use of dryland plants with satellites. We developed and tested an approach for estimating dryland vegetation activity using machine learning to combine information from multiple satellite sensors. Our approach excelled at estimating photosynthesis and water use largely due to the inclusion of satellite soil moisture.
Mark Pickering, Alessandro Cescatti, and Gregory Duveiller
Biogeosciences, 19, 4833–4864, https://doi.org/10.5194/bg-19-4833-2022, https://doi.org/10.5194/bg-19-4833-2022, 2022
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This study explores two of the most recent products in carbon productivity estimation, FLUXCOM gross primary productivity (GPP), calculated by upscaling local measurements of CO2 exchange, and remotely sensed sun-induced chlorophyll a fluorescence (SIF). High-resolution SIF data are valuable in demonstrating similarity in the SIF–GPP relationship between vegetation covers, provide an independent probe of the FLUXCOM GPP model and demonstrate the response of SIF to meteorological fluctuations.
Sophia Walther, Simon Besnard, Jacob Allen Nelson, Tarek Sebastian El-Madany, Mirco Migliavacca, Ulrich Weber, Nuno Carvalhais, Sofia Lorena Ermida, Christian Brümmer, Frederik Schrader, Anatoly Stanislavovich Prokushkin, Alexey Vasilevich Panov, and Martin Jung
Biogeosciences, 19, 2805–2840, https://doi.org/10.5194/bg-19-2805-2022, https://doi.org/10.5194/bg-19-2805-2022, 2022
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Satellite observations help interpret station measurements of local carbon, water, and energy exchange between the land surface and the atmosphere and are indispensable for simulations of the same in land surface models and their evaluation. We propose generalisable and efficient approaches to systematically ensure high quality and to estimate values in data gaps. We apply them to satellite data of surface reflectance and temperature with different resolutions at the stations.
Elisabeth Mauclet, Yannick Agnan, Catherine Hirst, Arthur Monhonval, Benoît Pereira, Aubry Vandeuren, Maëlle Villani, Justin Ledman, Meghan Taylor, Briana L. Jasinski, Edward A. G. Schuur, and Sophie Opfergelt
Biogeosciences, 19, 2333–2351, https://doi.org/10.5194/bg-19-2333-2022, https://doi.org/10.5194/bg-19-2333-2022, 2022
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Arctic warming and permafrost degradation largely affect tundra vegetation. Wetter lowlands show an increase in sedges, whereas drier uplands favor shrub expansion. Here, we demonstrate that the difference in the foliar elemental composition of typical tundra vegetation species controls the change in local foliar elemental stock and potential mineral element cycling through litter production upon a shift in tundra vegetation.
Tiexi Chen, Renjie Guo, Qingyun Yan, Xin Chen, Shengjie Zhou, Chuanzhuang Liang, Xueqiong Wei, and Han Dolman
Biogeosciences, 19, 1515–1525, https://doi.org/10.5194/bg-19-1515-2022, https://doi.org/10.5194/bg-19-1515-2022, 2022
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Currently people are very concerned about vegetation changes and their driving factors, including natural and anthropogenic drivers. In this study, a general browning trend is found in Syria during 2001–2018, indicated by the vegetation index. We found that land management caused by social unrest is the main cause of this browning phenomenon. The mechanism initially reported here highlights the importance of land management impacts at the regional scale.
Rahayu Adzhar, Douglas I. Kelley, Ning Dong, Charles George, Mireia Torello Raventos, Elmar Veenendaal, Ted R. Feldpausch, Oliver L. Phillips, Simon L. Lewis, Bonaventure Sonké, Herman Taedoumg, Beatriz Schwantes Marimon, Tomas Domingues, Luzmila Arroyo, Gloria Djagbletey, Gustavo Saiz, and France Gerard
Biogeosciences, 19, 1377–1394, https://doi.org/10.5194/bg-19-1377-2022, https://doi.org/10.5194/bg-19-1377-2022, 2022
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The MODIS Vegetation Continuous Fields (VCF) product underestimates tree cover compared to field data and could be underestimating tree cover significantly across the tropics. VCF is used to represent land cover or validate model performance in many land surface and global vegetation models and to train finer-scaled Earth observation products. Because underestimation in VCF may render it unsuitable for training data and bias model predictions, it should be calibrated before use in the tropics.
Lina Teckentrup, Martin G. De Kauwe, Andrew J. Pitman, Daniel S. Goll, Vanessa Haverd, Atul K. Jain, Emilie Joetzjer, Etsushi Kato, Sebastian Lienert, Danica Lombardozzi, Patrick C. McGuire, Joe R. Melton, Julia E. M. S. Nabel, Julia Pongratz, Stephen Sitch, Anthony P. Walker, and Sönke Zaehle
Biogeosciences, 18, 5639–5668, https://doi.org/10.5194/bg-18-5639-2021, https://doi.org/10.5194/bg-18-5639-2021, 2021
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The Australian continent is included in global assessments of the carbon cycle such as the global carbon budget, yet the performance of dynamic global vegetation models (DGVMs) over Australia has rarely been evaluated. We assessed simulations by an ensemble of dynamic global vegetation models over Australia and highlighted a number of key areas that lead to model divergence on both short (inter-annual) and long (decadal) timescales.
Juhwan Lee, Raphael A. Viscarra Rossel, Mingxi Zhang, Zhongkui Luo, and Ying-Ping Wang
Biogeosciences, 18, 5185–5202, https://doi.org/10.5194/bg-18-5185-2021, https://doi.org/10.5194/bg-18-5185-2021, 2021
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We performed Roth C simulations across Australia and assessed the response of soil carbon to changing inputs and future climate change using a consistent modelling framework. Site-specific initialisation of the C pools with measurements of the C fractions is essential for accurate simulations of soil organic C stocks and composition at a large scale. With further warming, Australian soils will become more vulnerable to C loss: natural environments > native grazing > cropping > modified grazing.
Anam M. Khan, Paul C. Stoy, James T. Douglas, Martha Anderson, George Diak, Jason A. Otkin, Christopher Hain, Elizabeth M. Rehbein, and Joel McCorkel
Biogeosciences, 18, 4117–4141, https://doi.org/10.5194/bg-18-4117-2021, https://doi.org/10.5194/bg-18-4117-2021, 2021
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Remote sensing has played an important role in the study of land surface processes. Geostationary satellites, such as the GOES-R series, can observe the Earth every 5–15 min, providing us with more observations than widely used polar-orbiting satellites. Here, we outline current efforts utilizing geostationary observations in environmental science and look towards the future of GOES observations in the carbon cycle, ecosystem disturbance, and other areas of application in environmental science.
Lydia Stolpmann, Caroline Coch, Anne Morgenstern, Julia Boike, Michael Fritz, Ulrike Herzschuh, Kathleen Stoof-Leichsenring, Yury Dvornikov, Birgit Heim, Josefine Lenz, Amy Larsen, Katey Walter Anthony, Benjamin Jones, Karen Frey, and Guido Grosse
Biogeosciences, 18, 3917–3936, https://doi.org/10.5194/bg-18-3917-2021, https://doi.org/10.5194/bg-18-3917-2021, 2021
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Our new database summarizes DOC concentrations of 2167 water samples from 1833 lakes in permafrost regions across the Arctic to provide insights into linkages between DOC and environment. We found increasing lake DOC concentration with decreasing permafrost extent and higher DOC concentrations in boreal permafrost sites compared to tundra sites. Our study shows that DOC concentration depends on the environmental properties of a lake, especially permafrost extent, ecoregion, and vegetation.
Gustaf Granath, Christopher D. Evans, Joachim Strengbom, Jens Fölster, Achim Grelle, Johan Strömqvist, and Stephan J. Köhler
Biogeosciences, 18, 3243–3261, https://doi.org/10.5194/bg-18-3243-2021, https://doi.org/10.5194/bg-18-3243-2021, 2021
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We measured element losses and impacts on water quality following a wildfire in Sweden. We observed the largest carbon and nitrogen losses during the fire and a strong pulse of elements 1–3 months after the fire that showed a fast (weeks) and a slow (months) release from the catchments. Total carbon export through water did not increase post-fire. Overall, we observed a rapid recovery of the biogeochemical cycling of elements within 3 years but still an annual net release of carbon dioxide.
Lina Teckentrup, Martin G. De Kauwe, Andrew J. Pitman, and Benjamin Smith
Biogeosciences, 18, 2181–2203, https://doi.org/10.5194/bg-18-2181-2021, https://doi.org/10.5194/bg-18-2181-2021, 2021
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The El Niño–Southern Oscillation (ENSO) describes changes in the sea surface temperature patterns of the Pacific Ocean. This influences the global weather, impacting vegetation on land. There are two types of El Niño: central Pacific (CP) and eastern Pacific (EP). In this study, we explored the long-term impacts on the carbon balance on land linked to the two El Niño types. Using a dynamic vegetation model, we simulated what would happen if only either CP or EP El Niño events had occurred.
Matthias Volk, Matthias Suter, Anne-Lena Wahl, and Seraina Bassin
Biogeosciences, 18, 2075–2090, https://doi.org/10.5194/bg-18-2075-2021, https://doi.org/10.5194/bg-18-2075-2021, 2021
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Grassland ecosystem services like forage production and greenhouse gas storage in the soil depend on plant growth.
In an experiment in the mountains with warming treatments, we found that despite dwindling soil water content, the grassland growth increased with up to +1.3 °C warming (annual mean) compared to present temperatures. Even at +2.4 °C the growth was still larger than at the reference site.
This suggests that plant growth will increase due to global warming in the near future.
Bernice C. Hwang and Daniel B. Metcalfe
Biogeosciences, 18, 1259–1268, https://doi.org/10.5194/bg-18-1259-2021, https://doi.org/10.5194/bg-18-1259-2021, 2021
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Despite growing recognition of herbivores as important ecosystem engineers, many major gaps remain in our understanding of how silicon and herbivory interact to shape biogeochemical processes. We highlight the need for more research particularly in natural settings as well as on the potential effects of herbivory on terrestrial silicon cycling to understand potentially critical animal–plant–soil feedbacks.
Ali Asaadi and Vivek K. Arora
Biogeosciences, 18, 669–706, https://doi.org/10.5194/bg-18-669-2021, https://doi.org/10.5194/bg-18-669-2021, 2021
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More than a quarter of the current anthropogenic CO2 emissions are taken up by land, reducing the atmospheric CO2 growth rate. This is because of the CO2 fertilization effect which benefits 80 % of global vegetation. However, if nitrogen and phosphorus nutrients cannot keep up with increasing atmospheric CO2, the magnitude of this terrestrial ecosystem service may reduce in future. This paper implements nitrogen constraints on photosynthesis in a model to understand the mechanisms involved.
Arianna Peron, Lisa Kaser, Anne Charlott Fitzky, Martin Graus, Heidi Halbwirth, Jürgen Greiner, Georg Wohlfahrt, Boris Rewald, Hans Sandén, and Thomas Karl
Biogeosciences, 18, 535–556, https://doi.org/10.5194/bg-18-535-2021, https://doi.org/10.5194/bg-18-535-2021, 2021
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Drought events are expected to become more frequent with climate change. Along with these events atmospheric ozone is also expected to increase. Both can stress plants. Here we investigate to what extent these factors modulate the emission of volatile organic compounds (VOCs) from oak plants. We find an antagonistic effect between drought stress and ozone, impacting the emission of different BVOCs, which is indirectly controlled by stomatal opening, allowing plants to control their water budget.
Lena Wohlgemuth, Stefan Osterwalder, Carl Joseph, Ansgar Kahmen, Günter Hoch, Christine Alewell, and Martin Jiskra
Biogeosciences, 17, 6441–6456, https://doi.org/10.5194/bg-17-6441-2020, https://doi.org/10.5194/bg-17-6441-2020, 2020
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Mercury uptake by trees from the air represents an important but poorly quantified pathway in the global mercury cycle. We determined mercury uptake fluxes by leaves and needles at 10 European forests which were 4 times larger than mercury deposition via rainfall. The amount of mercury taken up by leaves and needles depends on their age and growing height on the tree. Scaling up our measurements to the forest area of Europe, we estimate that each year 20 t of mercury is taken up by trees.
A. Anthony Bloom, Kevin W. Bowman, Junjie Liu, Alexandra G. Konings, John R. Worden, Nicholas C. Parazoo, Victoria Meyer, John T. Reager, Helen M. Worden, Zhe Jiang, Gregory R. Quetin, T. Luke Smallman, Jean-François Exbrayat, Yi Yin, Sassan S. Saatchi, Mathew Williams, and David S. Schimel
Biogeosciences, 17, 6393–6422, https://doi.org/10.5194/bg-17-6393-2020, https://doi.org/10.5194/bg-17-6393-2020, 2020
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We use a model of the 2001–2015 tropical land carbon cycle, with satellite measurements of land and atmospheric carbon, to disentangle lagged and concurrent effects (due to past and concurrent meteorological events, respectively) on annual land–atmosphere carbon exchanges. The variability of lagged effects explains most 2001–2015 inter-annual carbon flux variations. We conclude that concurrent and lagged effects need to be accurately resolved to better predict the world's land carbon sink.
Erqian Cui, Chenyu Bian, Yiqi Luo, Shuli Niu, Yingping Wang, and Jianyang Xia
Biogeosciences, 17, 6237–6246, https://doi.org/10.5194/bg-17-6237-2020, https://doi.org/10.5194/bg-17-6237-2020, 2020
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Mean annual net ecosystem productivity (NEP) is related to the magnitude of the carbon sink of a specific ecosystem, while its inter-annual variation (IAVNEP) characterizes the stability of such a carbon sink. Thus, a better understanding of the co-varying NEP and IAVNEP is critical for locating the major and stable carbon sinks on land. Based on daily NEP observations from eddy-covariance sites, we found local indicators for the spatially varying NEP and IAVNEP, respectively.
Taraka Davies-Barnard, Johannes Meyerholt, Sönke Zaehle, Pierre Friedlingstein, Victor Brovkin, Yuanchao Fan, Rosie A. Fisher, Chris D. Jones, Hanna Lee, Daniele Peano, Benjamin Smith, David Wårlind, and Andy J. Wiltshire
Biogeosciences, 17, 5129–5148, https://doi.org/10.5194/bg-17-5129-2020, https://doi.org/10.5194/bg-17-5129-2020, 2020
Rui Cheng, Troy S. Magney, Debsunder Dutta, David R. Bowling, Barry A. Logan, Sean P. Burns, Peter D. Blanken, Katja Grossmann, Sophia Lopez, Andrew D. Richardson, Jochen Stutz, and Christian Frankenberg
Biogeosciences, 17, 4523–4544, https://doi.org/10.5194/bg-17-4523-2020, https://doi.org/10.5194/bg-17-4523-2020, 2020
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We measured reflected sunlight from an evergreen canopy for a year to detect changes in pigments that play an important role in regulating the seasonality of photosynthesis. Results show a strong mechanistic link between spectral reflectance features and pigment content, which is validated using a biophysical model. Our results show spectrally where, why, and when spectral features change over the course of the season and show promise for estimating photosynthesis remotely.
Jarmo Mäkelä, Francesco Minunno, Tuula Aalto, Annikki Mäkelä, Tiina Markkanen, and Mikko Peltoniemi
Biogeosciences, 17, 2681–2700, https://doi.org/10.5194/bg-17-2681-2020, https://doi.org/10.5194/bg-17-2681-2020, 2020
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We assess the relative magnitude of uncertainty sources on ecosystem indicators of the 21st century climate change on two boreal forest sites. In addition to RCP and climate model uncertainties, we included the overlooked model parameter uncertainty and management actions in our analysis. Management was the dominant uncertainty factor for the more verdant southern site, followed by RCP, climate and parameter uncertainties. The uncertainties were estimated with canonical correlation analysis.
Guido Kraemer, Gustau Camps-Valls, Markus Reichstein, and Miguel D. Mahecha
Biogeosciences, 17, 2397–2424, https://doi.org/10.5194/bg-17-2397-2020, https://doi.org/10.5194/bg-17-2397-2020, 2020
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To closely monitor the state of our planet, we require systems that can monitor
the observation of many different properties at the same time. We create
indicators that resemble the behavior of many different simultaneous
observations. We apply the method to create indicators representing the
Earth's biosphere. The indicators show a productivity gradient and a water
gradient. The resulting indicators can detect a large number of changes and
extremes in the Earth system.
Barbara Marcolla, Mirco Migliavacca, Christian Rödenbeck, and Alessandro Cescatti
Biogeosciences, 17, 2365–2379, https://doi.org/10.5194/bg-17-2365-2020, https://doi.org/10.5194/bg-17-2365-2020, 2020
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This work investigates the sensitivity of terrestrial CO2 fluxes to climate drivers. We observed that CO2 flux is mostly controlled by temperature during the growing season and by radiation off season. We also observe that radiation importance is increasing over time while sensitivity to temperature is decreasing in Eurasia. Ultimately this analysis shows that ecosystem response to climate is changing, with potential repercussions for future terrestrial sink and land role in climate mitigation.
Stephanie C. Pennington, Nate G. McDowell, J. Patrick Megonigal, James C. Stegen, and Ben Bond-Lamberty
Biogeosciences, 17, 771–780, https://doi.org/10.5194/bg-17-771-2020, https://doi.org/10.5194/bg-17-771-2020, 2020
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Soil respiration (Rs) is the flow of CO2 from the soil surface to the atmosphere and is one of the largest carbon fluxes on land. This study examined the effect of local basal area (tree area) on Rs in a coastal forest in eastern Maryland, USA. Rs measurements were taken as well as distance from soil collar, diameter, and species of each tree within a 15 m radius. We found that trees within 5 m of our sampling points had a positive effect on how sensitive soil respiration was to temperature.
Keri L. Bowering, Kate A. Edwards, Karen Prestegaard, Xinbiao Zhu, and Susan E. Ziegler
Biogeosciences, 17, 581–595, https://doi.org/10.5194/bg-17-581-2020, https://doi.org/10.5194/bg-17-581-2020, 2020
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We examined the effects of season and tree harvesting on the flow of water and the organic carbon (OC) it carries from boreal forest soils. We found that more OC was lost from the harvested forest because more precipitation reached the soil surface but that during periods of flushing in autumn and snowmelt a limit on the amount of water-extractable OC is reached. These results contribute to an increased understanding of carbon loss from boreal forest soils.
Jason Philip Kaye, Susan L. Brantley, Jennifer Zan Williams, and the SSHCZO team
Biogeosciences, 16, 4661–4669, https://doi.org/10.5194/bg-16-4661-2019, https://doi.org/10.5194/bg-16-4661-2019, 2019
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Interdisciplinary teams can only capitalize on innovative ideas if members work well together through collegial and efficient use of field sites, instrumentation, samples, data, and model code. Thus, biogeoscience teams may benefit from developing a set of best practices for collaboration. We present one such example from a the Susquehanna Shale Hills critical zone observatory. Many of the themes from our example are universal, and they offer insights useful to other biogeoscience teams.
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Short summary
This study presents an estimate of global terrestrial photosynthesis. We make use of satellite chlorophyll fluorescence measurements, a visible indicator of photosynthesis, to optimize model parameters and estimate photosynthetic carbon uptake. This new framework incorporates nonlinear, process-based understanding of the link between fluorescence and photosynthesis, an advance on past approaches. This will aid in the utility of fluorescence to quantify terrestrial carbon cycle feedbacks.
This study presents an estimate of global terrestrial photosynthesis. We make use of satellite...
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