Articles | Volume 13, issue 4
https://doi.org/10.5194/bg-13-943-2016
© Author(s) 2016. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
https://doi.org/10.5194/bg-13-943-2016
© Author(s) 2016. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
Research article
| 
19 Feb 2016
Research article |
| 19 Feb 2016
Uncertainty and sensitivity in optode-based shelf-sea net community production estimates
Centre for Environment, Fisheries and Aquaculture Science, Lowestoft, UK
Centre for Ocean and Atmospheric Sciences, School of Environmental Sciences, University of East Anglia, Norwich, UK
Naomi Greenwood
Centre for Environment, Fisheries and Aquaculture Science, Lowestoft, UK
Centre for Ocean and Atmospheric Sciences, School of Environmental Sciences, University of East Anglia, Norwich, UK
Jan Kaiser
Centre for Ocean and Atmospheric Sciences, School of Environmental Sciences, University of East Anglia, Norwich, UK
Martin Johnson
Centre for Environment, Fisheries and Aquaculture Science, Lowestoft, UK
Centre for Ocean and Atmospheric Sciences, School of Environmental Sciences, University of East Anglia, Norwich, UK
Related authors
Benjamin R. Loveday, Timothy Smyth, Anıl Akpinar, Tom Hull, Mark E. Inall, Jan Kaiser, Bastien Y. Queste, Matt Tobermann, Charlotte A. J. Williams, and Matthew R. Palmer
Earth Syst. Sci. Data, 14, 3997–4016, https://doi.org/10.5194/essd-14-3997-2022, https://doi.org/10.5194/essd-14-3997-2022, 2022
Short summary
Short summary
Using a new approach to combine autonomous underwater glider data and satellite Earth observations, we have generated a 19-month time series of North Sea net primary productivity – the rate at which phytoplankton absorbs carbon dioxide minus that lost through respiration. This time series, which spans 13 gliders, allows for new investigations into small-scale, high-frequency variability in the biogeochemical processes that underpin the carbon cycle and coastal marine ecosystems in shelf seas.
Tom Hull, Naomi Greenwood, Antony Birchill, Alexander Beaton, Matthew Palmer, and Jan Kaiser
Biogeosciences, 18, 6167–6180, https://doi.org/10.5194/bg-18-6167-2021, https://doi.org/10.5194/bg-18-6167-2021, 2021
Short summary
Short summary
The shallow shelf seas play a large role in the global cycling of CO2 and also support large fisheries. We use an autonomous underwater vehicle in the central North Sea to measure the rates of change in oxygen and nutrients.
Using these data we determine the amount of carbon dioxide taken out of the atmosphere by the sea and measure how productive the region is.
These observations will be useful for improving our predictive models and help us predict and adapt to a changing ocean.
Charlotte A. J. Williams, Tom Hull, Jan Kaiser, Claire Mahaffey, Naomi Greenwood, Matthew Toberman, and Matthew R. Palmer
Biogeosciences, 21, 1961–1971, https://doi.org/10.5194/bg-21-1961-2024, https://doi.org/10.5194/bg-21-1961-2024, 2024
Short summary
Short summary
Oxygen (O2) is a key indicator of ocean health. The risk of O2 loss in the productive coastal/continental slope regions is increasing. Autonomous underwater vehicles equipped with O2 optodes provide lots of data but have problems resolving strong vertical O2 changes. Here we show how to overcome this and calculate how much O2 is supplied to the low-O2 bottom waters via mixing. Bursts in mixing supply nearly all of the O2 to bottom waters in autumn, stopping them reaching ecologically low levels.
Amelia M. H. Bond, Markus M. Frey, Jan Kaiser, Jörg Kleffmann, Anna E. Jones, and Freya A. Squires
Atmos. Chem. Phys., 23, 5533–5550, https://doi.org/10.5194/acp-23-5533-2023, https://doi.org/10.5194/acp-23-5533-2023, 2023
Short summary
Short summary
Atmospheric nitrous acid (HONO) amount fractions measured at Halley Research Station, Antarctica, were found to be low. Vertical fluxes of HONO from the snow were also measured and agree with the estimated HONO production rate from photolysis of snow nitrate. In a simple box model of HONO sources and sinks, there was good agreement between the measured flux and amount fraction. HONO was found to be an important OH radical source at Halley.
Benjamin R. Loveday, Timothy Smyth, Anıl Akpinar, Tom Hull, Mark E. Inall, Jan Kaiser, Bastien Y. Queste, Matt Tobermann, Charlotte A. J. Williams, and Matthew R. Palmer
Earth Syst. Sci. Data, 14, 3997–4016, https://doi.org/10.5194/essd-14-3997-2022, https://doi.org/10.5194/essd-14-3997-2022, 2022
Short summary
Short summary
Using a new approach to combine autonomous underwater glider data and satellite Earth observations, we have generated a 19-month time series of North Sea net primary productivity – the rate at which phytoplankton absorbs carbon dioxide minus that lost through respiration. This time series, which spans 13 gliders, allows for new investigations into small-scale, high-frequency variability in the biogeochemical processes that underpin the carbon cycle and coastal marine ecosystems in shelf seas.
Michael P. Hemming, Jan Kaiser, Jacqueline Boutin, Liliane Merlivat, Karen J. Heywood, Dorothee C. E. Bakker, Gareth A. Lee, Marcos Cobas García, David Antoine, and Kiminori Shitashima
Ocean Sci., 18, 1245–1262, https://doi.org/10.5194/os-18-1245-2022, https://doi.org/10.5194/os-18-1245-2022, 2022
Short summary
Short summary
An underwater glider mission was carried out in spring 2016 near a mooring in the northwestern Mediterranean Sea. The glider deployment served as a test of a prototype ion-sensitive field-effect transistor pH sensor. Mean net community production rates were estimated from glider and buoy measurements of dissolved oxygen and inorganic carbon concentrations before and during the spring bloom. Incorporating advection is important for accurate mass budgets. Unexpected metabolic quotients were found.
Josué Bock, Jan Kaiser, Max Thomas, Andreas Bott, and Roland von Glasow
Geosci. Model Dev., 15, 5807–5828, https://doi.org/10.5194/gmd-15-5807-2022, https://doi.org/10.5194/gmd-15-5807-2022, 2022
Short summary
Short summary
MISTRA-v9.0 is an atmospheric boundary layer chemistry model. The model includes a detailed particle description with regards to the microphysics, gas–particle interactions, and liquid phase chemistry within particles. Version 9.0 is the first release of MISTRA as an open-source community model. This paper presents a thorough description of the model characteristics and components. We show some examples of simulations reproducing previous studies with MISTRA with good consistency.
Tom Hull, Naomi Greenwood, Antony Birchill, Alexander Beaton, Matthew Palmer, and Jan Kaiser
Biogeosciences, 18, 6167–6180, https://doi.org/10.5194/bg-18-6167-2021, https://doi.org/10.5194/bg-18-6167-2021, 2021
Short summary
Short summary
The shallow shelf seas play a large role in the global cycling of CO2 and also support large fisheries. We use an autonomous underwater vehicle in the central North Sea to measure the rates of change in oxygen and nutrients.
Using these data we determine the amount of carbon dioxide taken out of the atmosphere by the sea and measure how productive the region is.
These observations will be useful for improving our predictive models and help us predict and adapt to a changing ocean.
Max Thomas, Johannes C. Laube, Jan Kaiser, Samuel Allin, Patricia Martinerie, Robert Mulvaney, Anna Ridley, Thomas Röckmann, William T. Sturges, and Emmanuel Witrant
Atmos. Chem. Phys., 21, 6857–6873, https://doi.org/10.5194/acp-21-6857-2021, https://doi.org/10.5194/acp-21-6857-2021, 2021
Short summary
Short summary
CFC gases are destroying the Earth's life-protecting ozone layer. We improve understanding of CFC destruction by measuring the isotopic fingerprint of the carbon in the three most abundant CFCs. These are the first such measurements in the main region where CFCs are destroyed – the stratosphere. We reconstruct the atmospheric isotope histories of these CFCs back to the 1950s by measuring air extracted from deep snow and using a model. The model and the measurements are generally consistent.
Luca Possenti, Ingunn Skjelvan, Dariia Atamanchuk, Anders Tengberg, Matthew P. Humphreys, Socratis Loucaides, Liam Fernand, and Jan Kaiser
Ocean Sci., 17, 593–614, https://doi.org/10.5194/os-17-593-2021, https://doi.org/10.5194/os-17-593-2021, 2021
Short summary
Short summary
A Seaglider was deployed for 8 months in the Norwegian Sea mounting an oxygen and, for the first time, a CO2 optode and a chlorophyll fluorescence sensor. The oxygen and CO2 data were used to assess the spatial and temporal variability and calculate the net community production, N(O2) and N(CT). The dataset was used to calculate net community production from inventory changes, air–sea flux, diapycnal mixing and entrainment.
Max Thomas, James France, Odile Crabeck, Benjamin Hall, Verena Hof, Dirk Notz, Tokoloho Rampai, Leif Riemenschneider, Oliver John Tooth, Mathilde Tranter, and Jan Kaiser
Atmos. Meas. Tech., 14, 1833–1849, https://doi.org/10.5194/amt-14-1833-2021, https://doi.org/10.5194/amt-14-1833-2021, 2021
Short summary
Short summary
We describe the Roland von Glasow Air-Sea-Ice Chamber, a laboratory facility for studying ocean–sea-ice–atmosphere interactions. We characterise the technical capabilities of our facility to help future users plan and perform experiments. We also characterise the sea ice grown in the facility, showing that the extinction of photosynthetically active radiation, the bulk salinity, and the growth rate of our artificial sea ice are within the range of natural values.
Saisiri Chaichana, Tim Jickells, and Martin Johnson
Biogeosciences, 16, 1073–1096, https://doi.org/10.5194/bg-16-1073-2019, https://doi.org/10.5194/bg-16-1073-2019, 2019
Short summary
Short summary
Organic molecules dissolved in the waters of coastal seas (DOM) are a potentially important vector for carbon transport and storage in the open ocean. DOM carbon and nitrogen concentrations from two consecutive summers in the North Sea show a strong pattern of concentrations decreasing away from land. We also observe significant differences between the years in both the DOM concentration and C : N ratios, suggesting that carbon export from shelf seas might be mediated by organic matter cycling.
Reiner Onken, Heinz-Volker Fiekas, Laurent Beguery, Ines Borrione, Andreas Funk, Michael Hemming, Jaime Hernandez-Lasheras, Karen J. Heywood, Jan Kaiser, Michaela Knoll, Baptiste Mourre, Paolo Oddo, Pierre-Marie Poulain, Bastien Y. Queste, Aniello Russo, Kiminori Shitashima, Martin Siderius, and Elizabeth Thorp Küsel
Ocean Sci., 14, 321–335, https://doi.org/10.5194/os-14-321-2018, https://doi.org/10.5194/os-14-321-2018, 2018
Short summary
Short summary
In June 2014, high-resolution oceanographic data were collected in the
western Mediterranean Sea by two research vessels, 11 gliders, moored
instruments, drifters, and one profiling float. The objective
of this article is to provide an overview of the data set which
is utilised by various ongoing studies, focusing on (i) water masses and circulation, (ii) operational forecasting, (iii) data assimilation, (iv) variability of the ocean, and (v) new payloads
for gliders.
Chris J. Curtis, Jan Kaiser, Alina Marca, N. John Anderson, Gavin Simpson, Vivienne Jones, and Erika Whiteford
Biogeosciences, 15, 529–550, https://doi.org/10.5194/bg-15-529-2018, https://doi.org/10.5194/bg-15-529-2018, 2018
Short summary
Short summary
Few studies have investigated the atmospheric deposition of nitrate in the Arctic or its impacts on Arctic ecosystems. We collected late-season snowpack from three regions in western Greenland from the coast to the edge of the ice sheet. We found major differences in nitrate concentrations (lower at the coast) and deposition load (higher). Nitrate in snowpack undergoes losses and isotopic enrichment which are greatest in inland areas; hence deposition impacts may be greatest at the coast.
Michaela Knoll, Ines Borrione, Heinz-Volker Fiekas, Andreas Funk, Michael P. Hemming, Jan Kaiser, Reiner Onken, Bastien Queste, and Aniello Russo
Ocean Sci., 13, 889–904, https://doi.org/10.5194/os-13-889-2017, https://doi.org/10.5194/os-13-889-2017, 2017
Short summary
Short summary
The hydrography and circulation west of Sardinia, observed in June 2014 during REP14-MED by means of various measuring platforms, are presented and compared with previous knowledge. So far, the circulation of this area is not well-known and the hydrography is subject to long-term changes. The different water masses are characterized and temporal changes are emphasized. The observed eddies are specified and geostrophic transports in the upper ocean are presented.
Michael P. Hemming, Jan Kaiser, Karen J. Heywood, Dorothee C.E. Bakker, Jacqueline Boutin, Kiminori Shitashima, Gareth Lee, Oliver Legge, and Reiner Onken
Ocean Sci., 13, 427–442, https://doi.org/10.5194/os-13-427-2017, https://doi.org/10.5194/os-13-427-2017, 2017
Short summary
Short summary
Underwater gliders are useful platforms for monitoring the world oceans at a high resolution. An experimental pH sensor was attached to an underwater glider in the Mediterranean Sea, which is an important carbon sink region. Comparing measurements from the glider with those obtained from a ship indicated that there were issues with the experimental pH sensor. Correcting for these issues enabled us to look at pH variability in the area related to biomass abundance and physical water properties.
Markella Prokopiou, Patricia Martinerie, Célia J. Sapart, Emmanuel Witrant, Guillaume Monteil, Kentaro Ishijima, Sophie Bernard, Jan Kaiser, Ingeborg Levin, Thomas Blunier, David Etheridge, Ed Dlugokencky, Roderik S. W. van de Wal, and Thomas Röckmann
Atmos. Chem. Phys., 17, 4539–4564, https://doi.org/10.5194/acp-17-4539-2017, https://doi.org/10.5194/acp-17-4539-2017, 2017
Short summary
Short summary
Nitrous oxide is the third most important anthropogenic greenhouse gas with an increasing mole fraction. To understand its natural and anthropogenic sources
we employ isotope measurements. Results show that while the N2O mole fraction increases, its heavy isotope content decreases. The isotopic changes observed underline the dominance of agricultural emissions especially at the early part of the record, whereas in the later decades the contribution from other anthropogenic sources increases.
Imke Grefe, Sophie Fielding, Karen J. Heywood, and Jan Kaiser
Biogeosciences Discuss., https://doi.org/10.5194/bg-2017-73, https://doi.org/10.5194/bg-2017-73, 2017
Revised manuscript not accepted
Dorothee C. E. Bakker, Benjamin Pfeil, Camilla S. Landa, Nicolas Metzl, Kevin M. O'Brien, Are Olsen, Karl Smith, Cathy Cosca, Sumiko Harasawa, Stephen D. Jones, Shin-ichiro Nakaoka, Yukihiro Nojiri, Ute Schuster, Tobias Steinhoff, Colm Sweeney, Taro Takahashi, Bronte Tilbrook, Chisato Wada, Rik Wanninkhof, Simone R. Alin, Carlos F. Balestrini, Leticia Barbero, Nicholas R. Bates, Alejandro A. Bianchi, Frédéric Bonou, Jacqueline Boutin, Yann Bozec, Eugene F. Burger, Wei-Jun Cai, Robert D. Castle, Liqi Chen, Melissa Chierici, Kim Currie, Wiley Evans, Charles Featherstone, Richard A. Feely, Agneta Fransson, Catherine Goyet, Naomi Greenwood, Luke Gregor, Steven Hankin, Nick J. Hardman-Mountford, Jérôme Harlay, Judith Hauck, Mario Hoppema, Matthew P. Humphreys, Christopher W. Hunt, Betty Huss, J. Severino P. Ibánhez, Truls Johannessen, Ralph Keeling, Vassilis Kitidis, Arne Körtzinger, Alex Kozyr, Evangelia Krasakopoulou, Akira Kuwata, Peter Landschützer, Siv K. Lauvset, Nathalie Lefèvre, Claire Lo Monaco, Ansley Manke, Jeremy T. Mathis, Liliane Merlivat, Frank J. Millero, Pedro M. S. Monteiro, David R. Munro, Akihiko Murata, Timothy Newberger, Abdirahman M. Omar, Tsuneo Ono, Kristina Paterson, David Pearce, Denis Pierrot, Lisa L. Robbins, Shu Saito, Joe Salisbury, Reiner Schlitzer, Bernd Schneider, Roland Schweitzer, Rainer Sieger, Ingunn Skjelvan, Kevin F. Sullivan, Stewart C. Sutherland, Adrienne J. Sutton, Kazuaki Tadokoro, Maciej Telszewski, Matthias Tuma, Steven M. A. C. van Heuven, Doug Vandemark, Brian Ward, Andrew J. Watson, and Suqing Xu
Earth Syst. Sci. Data, 8, 383–413, https://doi.org/10.5194/essd-8-383-2016, https://doi.org/10.5194/essd-8-383-2016, 2016
Short summary
Short summary
Version 3 of the Surface Ocean CO2 Atlas (www.socat.info) has 14.5 million CO2 (carbon dioxide) values for the years 1957 to 2014 covering the global oceans and coastal seas. Version 3 is an update to version 2 with a longer record and 44 % more CO2 values. The CO2 measurements have been made on ships, fixed moorings and drifting buoys. SOCAT enables quantification of the ocean carbon sink and ocean acidification, as well as model evaluation, thus informing climate negotiations.
Johan van der Molen, Piet Ruardij, and Naomi Greenwood
Biogeosciences, 13, 2593–2609, https://doi.org/10.5194/bg-13-2593-2016, https://doi.org/10.5194/bg-13-2593-2016, 2016
Short summary
Short summary
The potential large-scale (> 100 km) effects of marine renewable tidal energy generation in the Pentland Firth were studied using a 3-D hydrodynamics–biogeochemistry model. A realistic 800 MW scenario suggested minor effects on tides and biogeochemistry. A massive-expansion 8 GW scenario suggested effects over hundreds of kilometres away with changes of up to 10 % in tidal and ecosystem variables, the latter through clearer waters and increased primary production with associated increases in fauna.
Fabian Große, Naomi Greenwood, Markus Kreus, Hermann-Josef Lenhart, Detlev Machoczek, Johannes Pätsch, Lesley Salt, and Helmuth Thomas
Biogeosciences, 13, 2511–2535, https://doi.org/10.5194/bg-13-2511-2016, https://doi.org/10.5194/bg-13-2511-2016, 2016
Short summary
Short summary
We used the ECOHAM5 model to provide a consistent picture of the physical and biological drivers of oxygen deficiency in the North Sea. Regions susceptible to oxygen deficiency are characterised by low tidal mixing and moderate water depth (~ 40 m). Variations in upper layer productivity drive the year-to-year variability of bottom oxygen conditions. The model-based analysis reveals that benthic and pelagic remineralisation account for 90 % of bottom oxygen consumption observed at North Dogger.
Dominika Lewicka-Szczebak, Jens Dyckmans, Jan Kaiser, Alina Marca, Jürgen Augustin, and Reinhard Well
Biogeosciences, 13, 1129–1144, https://doi.org/10.5194/bg-13-1129-2016, https://doi.org/10.5194/bg-13-1129-2016, 2016
Short summary
Short summary
Oxygen isotopic signatures of N2O are formed in complex multistep enzymatic reactions and depend on isotopic fractionation during enzymatic reduction of nitrate to N2O and on the oxygen isotope exchange with soil water. We propose a new method for quantification of oxygen isotope exchange, with simultaneous determination of oxygen isotopic signatures, to decipher the mechanism of oxygen isotopic fractionation. We indicate the differences between fractionation mechanisms by various pathways.
S. Walter, A. Kock, T. Steinhoff, B. Fiedler, P. Fietzek, J. Kaiser, M. Krol, M. E. Popa, Q. Chen, T. Tanhua, and T. Röckmann
Biogeosciences, 13, 323–340, https://doi.org/10.5194/bg-13-323-2016, https://doi.org/10.5194/bg-13-323-2016, 2016
Short summary
Short summary
Oceans are a source of H2, an indirect greenhouse gas. Measurements constraining the temporal and spatial patterns of oceanic H2 emissions are sparse and although H2 is assumed to be produced mainly biologically, direct evidence for biogenic marine production was lacking. By analyzing the H2 isotopic composition (δD) we were able to constrain the global H2 budget in more detail, verify biogenic production and point to additional sources. We also showed that current models are reasonably working.
J. Gloël, C. Robinson, G. H. Tilstone, G. Tarran, and J. Kaiser
Ocean Sci., 11, 947–952, https://doi.org/10.5194/os-11-947-2015, https://doi.org/10.5194/os-11-947-2015, 2015
Short summary
Short summary
We assess benzalkonium chloride (BAC) as alternative to mercuric chloride (HgCl2) for preservation of seawater samples. BAC concentrations of 50mg dm–3 inhibited microbial activity for at least 3 days in samples tested with chlorophyll a concentrations up to 1mg m–3. With fewer risks to health and environment, and lower waste disposal costs, BAC could be a short-term alternative to HgCl2, but cannot replace it for oxygen triple isotope samples, which require storage over weeks to months.
K. Ishijima, M. Takigawa, K. Sudo, S. Toyoda, N. Yoshida, T. Röckmann, J. Kaiser, S. Aoki, S. Morimoto, S. Sugawara, and T. Nakazawa
Atmos. Chem. Phys. Discuss., https://doi.org/10.5194/acpd-15-19947-2015, https://doi.org/10.5194/acpd-15-19947-2015, 2015
Revised manuscript not accepted
Short summary
Short summary
We developed an atmospheric N2O isotopocule model based on a chemistry-coupled atmospheric general circulation model and a simple method to optimize the model, and estimated the isotopic signatures of surface sources at the hemispheric scale. Data obtained from ground-based observations, measurements of firn air, and balloon and aircraft flights were used to optimize the long-term trends, interhemispheric gradients, and photolytic fractionation, respectively, in the model.
S. J. Allin, J. C. Laube, E. Witrant, J. Kaiser, E. McKenna, P. Dennis, R. Mulvaney, E. Capron, P. Martinerie, T. Röckmann, T. Blunier, J. Schwander, P. J. Fraser, R. L. Langenfelds, and W. T. Sturges
Atmos. Chem. Phys., 15, 6867–6877, https://doi.org/10.5194/acp-15-6867-2015, https://doi.org/10.5194/acp-15-6867-2015, 2015
Short summary
Short summary
Stratospheric ozone protects life on Earth from harmful UV-B radiation. Chlorofluorocarbons (CFCs) are man-made compounds which act to destroy this barrier.
This paper presents (1) the first measurements of the stratospheric δ(37Cl) of CFCs -11 and -113; (2) the first quantification of long-term trends in the tropospheric δ(37Cl) of CFCs -11, -12 and -113.
This study provides a better understanding of source and sink processes associated with these destructive compounds.
D. J. Mrozek, C. van der Veen, M. Kliphuis, J. Kaiser, A. A. Wiegel, and T. Röckmann
Atmos. Meas. Tech., 8, 811–822, https://doi.org/10.5194/amt-8-811-2015, https://doi.org/10.5194/amt-8-811-2015, 2015
Short summary
Short summary
Our analytical system is a promising tool for investigating the triple oxygen isotope composition of CO2 from stratospheric air samples of volumes 100ml and smaller. The method is designed for measuring air samples with CO2 mole fractions between 360 and 400ppm, and it is the first fully automated analytical system that uses CeO2 as the isotope exchange medium.
N. Jiao, C. Robinson, F. Azam, H. Thomas, F. Baltar, H. Dang, N. J. Hardman-Mountford, M. Johnson, D. L. Kirchman, B. P. Koch, L. Legendre, C. Li, J. Liu, T. Luo, Y.-W. Luo, A. Mitra, A. Romanou, K. Tang, X. Wang, C. Zhang, and R. Zhang
Biogeosciences, 11, 5285–5306, https://doi.org/10.5194/bg-11-5285-2014, https://doi.org/10.5194/bg-11-5285-2014, 2014
M. Yang, R. Beale, P. Liss, M. Johnson, B. Blomquist, and P. Nightingale
Atmos. Chem. Phys., 14, 7499–7517, https://doi.org/10.5194/acp-14-7499-2014, https://doi.org/10.5194/acp-14-7499-2014, 2014
I. Grefe and J. Kaiser
Ocean Sci., 10, 501–512, https://doi.org/10.5194/os-10-501-2014, https://doi.org/10.5194/os-10-501-2014, 2014
V. V. Petrenko, P. Martinerie, P. Novelli, D. M. Etheridge, I. Levin, Z. Wang, T. Blunier, J. Chappellaz, J. Kaiser, P. Lang, L. P. Steele, S. Hammer, J. Mak, R. L. Langenfelds, J. Schwander, J. P. Severinghaus, E. Witrant, G. Petron, M. O. Battle, G. Forster, W. T. Sturges, J.-F. Lamarque, K. Steffen, and J. W. C. White
Atmos. Chem. Phys., 13, 7567–7585, https://doi.org/10.5194/acp-13-7567-2013, https://doi.org/10.5194/acp-13-7567-2013, 2013
K. Castro-Morales, N. Cassar, D. R. Shoosmith, and J. Kaiser
Biogeosciences, 10, 2273–2291, https://doi.org/10.5194/bg-10-2273-2013, https://doi.org/10.5194/bg-10-2273-2013, 2013
Related subject area
Biogeochemistry: Coastal Ocean
Distribution of nutrients and dissolved organic matter in a eutrophic equatorial estuary: the Johor River and the East Johor Strait
Investigating the effect of silicate- and calcium-based ocean alkalinity enhancement on diatom silicification
Ocean alkalinity enhancement using sodium carbonate salts does not lead to measurable changes in Fe dynamics in a mesocosm experiment
Quantification and mitigation of bottom-trawling impacts on sedimentary organic carbon stocks in the North Sea
Influence of ocean alkalinity enhancement with olivine or steel slag on a coastal plankton community in Tasmania
Multi-model comparison of trends and controls of near-bed oxygen concentration on the northwest European continental shelf under climate change
Picoplanktonic methane production in eutrophic surface waters
Vertical mixing alleviates autumnal oxygen deficiency in the central North Sea
Hypoxia also occurs in small highly turbid estuaries: the example of the Charente (Bay of Biscay)
Seasonality and response of ocean acidification and hypoxia to major environmental anomalies in the southern Salish Sea, North America (2014–2018)
Oceanographic processes driving low-oxygen conditions inside Patagonian fjords
Above- and belowground plant mercury dynamics in a salt marsh estuary in Massachusetts, USA
Variability and drivers of carbonate chemistry at shellfish aquaculture sites in the Salish Sea, British Columbia
Unusual Hemiaulus bloom influences ocean productivity in Northeastern US Shelf waters
Variable contribution of wastewater treatment plant effluents to nitrous oxide emission
Technical note: Ocean Alkalinity Enhancement Pelagic Impact Intercomparison Project (OAEPIIP)
Insights into carbonate environmental conditions in the Chukchi Sea
UAV approaches for improved mapping of vegetation cover and estimation of carbon storage of small saltmarshes: examples from Loch Fleet, northeast Scotland
Iron “ore” nothing: benthic iron fluxes from the oxygen-deficient Santa Barbara Basin enhance phytoplankton productivity in surface waters
Marine anoxia initiates giant sulfur-oxidizing bacterial mat proliferation and associated changes in benthic nitrogen, sulfur, and iron cycling in the Santa Barbara Basin, California Borderland
The Northeast Greenland shelf as a late-summer CO2 source to the atmosphere
A comprehensive assessment of electrochemical ocean alkalinity enhancement in seawater: kinetics, efficiency, and precipitation thresholds
Uncertainty in the evolution of northwestern North Atlantic circulation leads to diverging biogeochemical projections
The additionality problem of ocean alkalinity enhancement
Short-term variation in pH in seawaters around coastal areas of Japan: characteristics and forcings
Dissolved Nitric Oxide in the Lower Elbe Estuary and the Hamburg Port Area
Revisiting the applicability and constraints of molybdenum- and uranium-based paleo redox proxies: comparing two contrasting sill fjords
Influence of a small submarine canyon on biogenic matter export flux in the lower St. Lawrence Estuary, eastern Canada
Single-celled bioturbators: benthic foraminifera mediate oxygen penetration and prokaryotic diversity in intertidal sediment
Assessing impacts of coastal warming, acidification, and deoxygenation on Pacific oyster (Crassostrea gigas) farming: a case study in the Hinase area, Okayama Prefecture, and Shizugawa Bay, Miyagi Prefecture, Japan
The estimates of carbon sequestration potential in an expanding Arctic fjord affected by dark plumes of glacial meltwater (Hornsund, Svalbard)
Multiple nitrogen sources for primary production inferred from δ13C and δ15N in the southern Sea of Japan
Influence of manganese cycling on alkalinity in the redox stratified water column of Chesapeake Bay
Estuarine flocculation dynamics of organic carbon and metals from boreal acid sulfate soils
Drivers of particle sinking velocities in the Peruvian upwelling system
Impacts and uncertainties of climate-induced changes in watershed inputs on estuarine hypoxia
Considerations for hypothetical carbon dioxide removal via alkalinity addition in the Amazon River watershed
High metabolism and periodic hypoxia associated with drifting macrophyte detritus in the shallow subtidal Baltic Sea
Production and accumulation of reef framework by calcifying corals and macroalgae on a remote Indian Ocean cay
Zooplankton community succession and trophic links during a mesocosm experiment in the coastal upwelling off Callao Bay (Peru)
Temporal and spatial evolution of bottom-water hypoxia in the St Lawrence estuarine system
Significant nutrient consumption in the dark subsurface layer during a diatom bloom: a case study on Funka Bay, Hokkaido, Japan
Contrasts in dissolved, particulate, and sedimentary organic carbon from the Kolyma River to the East Siberian Shelf
Sediment quality assessment in an industrialized Greek coastal marine area (western Saronikos Gulf)
Limits and CO2 equilibration of near-coast alkalinity enhancement
Role of phosphorus in the seasonal deoxygenation of the East China Sea shelf
Interannual variability of the initiation of the phytoplankton growing period in two French coastal ecosystems
Spatio-temporal distribution, photoreactivity and environmental control of dissolved organic matter in the sea-surface microlayer of the eastern marginal seas of China
Metabolic alkalinity release from large port facilities (Hamburg, Germany) and impact on coastal carbon storage
A Numerical reassessment of the Gulf of Mexico carbon system in connection with the Mississippi River and global ocean
Amanda Y. L. Cheong, Kogila Vani Annammala, Ee Ling Yong, Yongli Zhou, Robert S. Nichols, and Patrick Martin
Biogeosciences, 21, 2955–2971, https://doi.org/10.5194/bg-21-2955-2024, https://doi.org/10.5194/bg-21-2955-2024, 2024
Short summary
Short summary
We measured nutrients and dissolved organic matter for 1 year in a eutrophic tropical estuary to understand their sources and cycling. Our data show that the dissolved organic matter originates partly from land and partly from microbial processes in the water. Internal recycling is likely important for maintaining high nutrient concentrations, and we found that there is often excess nitrogen compared to silicon and phosphorus. Our data help to explain how eutrophication persists in this system.
Aaron Ferderer, Kai G. Schulz, Ulf Riebesell, Kirralee G. Baker, Zanna Chase, and Lennart T. Bach
Biogeosciences, 21, 2777–2794, https://doi.org/10.5194/bg-21-2777-2024, https://doi.org/10.5194/bg-21-2777-2024, 2024
Short summary
Short summary
Ocean alkalinity enhancement (OAE) is a promising method of atmospheric carbon removal; however, its ecological impacts remain largely unknown. We assessed the effects of simulated silicate- and calcium-based mineral OAE on diatom silicification. We found that increased silicate concentrations from silicate-based OAE increased diatom silicification. In contrast, the enhancement of alkalinity had no effect on community silicification and minimal effects on the silicification of different genera.
David González-Santana, María Segovia, Melchor González-Dávila, Librada Ramírez, Aridane G. González, Leonardo J. Pozzo-Pirotta, Veronica Arnone, Victor Vázquez, Ulf Riebesell, and J. Magdalena Santana-Casiano
Biogeosciences, 21, 2705–2715, https://doi.org/10.5194/bg-21-2705-2024, https://doi.org/10.5194/bg-21-2705-2024, 2024
Short summary
Short summary
In a recent experiment off the coast of Gran Canaria (Spain), scientists explored a method called ocean alkalinization enhancement (OAE), where carbonate minerals were added to seawater. This process changed the levels of certain ions in the water, affecting its pH and buffering capacity. The researchers were particularly interested in how this could impact the levels of essential trace metals in the water.
Lucas Porz, Wenyan Zhang, Nils Christiansen, Jan Kossack, Ute Daewel, and Corinna Schrum
Biogeosciences, 21, 2547–2570, https://doi.org/10.5194/bg-21-2547-2024, https://doi.org/10.5194/bg-21-2547-2024, 2024
Short summary
Short summary
Seafloor sediments store a large amount of carbon, helping to naturally regulate Earth's climate. If disturbed, some sediment particles can turn into CO2, but this effect is not well understood. Using computer simulations, we found that bottom-contacting fishing gears release about 1 million tons of CO2 per year in the North Sea, one of the most heavily fished regions globally. We show how protecting certain areas could reduce these emissions while also benefitting seafloor-living animals.
Jiaying A. Guo, Robert F. Strzepek, Kerrie M. Swadling, Ashley T. Townsend, and Lennart T. Bach
Biogeosciences, 21, 2335–2354, https://doi.org/10.5194/bg-21-2335-2024, https://doi.org/10.5194/bg-21-2335-2024, 2024
Short summary
Short summary
Ocean alkalinity enhancement aims to increase atmospheric CO2 sequestration by adding alkaline materials to the ocean. We assessed the environmental effects of olivine and steel slag powder on coastal plankton. Overall, slag is more efficient than olivine in releasing total alkalinity and, thus, in its ability to sequester CO2. Slag also had less environmental effect on the enclosed plankton communities when considering its higher CO2 removal potential based on this 3-week experiment.
Giovanni Galli, Sarah Wakelin, James Harle, Jason Holt, and Yuri Artioli
Biogeosciences, 21, 2143–2158, https://doi.org/10.5194/bg-21-2143-2024, https://doi.org/10.5194/bg-21-2143-2024, 2024
Short summary
Short summary
This work shows that, under a high-emission scenario, oxygen concentration in deep water of parts of the North Sea and Celtic Sea can become critically low (hypoxia) towards the end of this century. The extent and frequency of hypoxia depends on the intensity of climate change projected by different climate models. This is the result of a complex combination of factors like warming, increase in stratification, changes in the currents and changes in biological processes.
Sandy E. Tenorio and Laura Farías
Biogeosciences, 21, 2029–2050, https://doi.org/10.5194/bg-21-2029-2024, https://doi.org/10.5194/bg-21-2029-2024, 2024
Short summary
Short summary
Time series studies show that CH4 is highly dynamic on the coastal ocean surface and planktonic communities are linked to CH4 accumulation, as found in coastal upwelling off Chile. We have identified the crucial role of picoplankton (> 3 µm) in CH4 recycling, especially with the addition of methylated substrates (trimethylamine and methylphosphonic acid) during upwelling and non-upwelling periods. These insights improve understanding of surface ocean CH4 recycling, aiding CH4 emission estimates.
Charlotte A. J. Williams, Tom Hull, Jan Kaiser, Claire Mahaffey, Naomi Greenwood, Matthew Toberman, and Matthew R. Palmer
Biogeosciences, 21, 1961–1971, https://doi.org/10.5194/bg-21-1961-2024, https://doi.org/10.5194/bg-21-1961-2024, 2024
Short summary
Short summary
Oxygen (O2) is a key indicator of ocean health. The risk of O2 loss in the productive coastal/continental slope regions is increasing. Autonomous underwater vehicles equipped with O2 optodes provide lots of data but have problems resolving strong vertical O2 changes. Here we show how to overcome this and calculate how much O2 is supplied to the low-O2 bottom waters via mixing. Bursts in mixing supply nearly all of the O2 to bottom waters in autumn, stopping them reaching ecologically low levels.
Sabine Schmidt and Ibrahima Iris Diallo
Biogeosciences, 21, 1785–1800, https://doi.org/10.5194/bg-21-1785-2024, https://doi.org/10.5194/bg-21-1785-2024, 2024
Short summary
Short summary
Along the French coast facing the Bay of Biscay, the large Gironde and Loire estuaries suffer from hypoxia. This prompted a study of the small Charente estuary located between them. This work reveals a minimum oxygen zone in the Charente estuary, which extends for about 25 km. Temperature is the main factor controlling the hypoxia. This calls for the monitoring of small turbid macrotidal estuaries that are vulnerable to hypoxia, a risk expected to increase with global warming.
Simone R. Alin, Jan A. Newton, Richard A. Feely, Samantha Siedlecki, and Dana Greeley
Biogeosciences, 21, 1639–1673, https://doi.org/10.5194/bg-21-1639-2024, https://doi.org/10.5194/bg-21-1639-2024, 2024
Short summary
Short summary
We provide a new multi-stressor data product that allows us to characterize the seasonality of temperature, O2, and CO2 in the southern Salish Sea and delivers insights into the impacts of major marine heatwave and precipitation anomalies on regional ocean acidification and hypoxia. We also describe the present-day frequencies of temperature, O2, and ocean acidification conditions that cross thresholds of sensitive regional species that are economically or ecologically important.
Pamela Linford, Iván Pérez-Santos, Paulina Montero, Patricio A. Díaz, Claudia Aracena, Elías Pinilla, Facundo Barrera, Manuel Castillo, Aida Alvera-Azcárate, Mónica Alvarado, Gabriel Soto, Cécile Pujol, Camila Schwerter, Sara Arenas-Uribe, Pilar Navarro, Guido Mancilla-Gutiérrez, Robinson Altamirano, Javiera San Martín, and Camila Soto-Riquelme
Biogeosciences, 21, 1433–1459, https://doi.org/10.5194/bg-21-1433-2024, https://doi.org/10.5194/bg-21-1433-2024, 2024
Short summary
Short summary
The Patagonian fjords comprise a world region where low-oxygen water and hypoxia conditions are observed. An in situ dataset was used to quantify the mechanism involved in the presence of these conditions in northern Patagonian fjords. Water mass analysis confirmed the contribution of Equatorial Subsurface Water in the advection of the low-oxygen water, and hypoxic conditions occurred when the community respiration rate exceeded the gross primary production.
Ting Wang, Buyun Du, Inke Forbrich, Jun Zhou, Joshua Polen, Elsie M. Sunderland, Prentiss H. Balcom, Celia Chen, and Daniel Obrist
Biogeosciences, 21, 1461–1476, https://doi.org/10.5194/bg-21-1461-2024, https://doi.org/10.5194/bg-21-1461-2024, 2024
Short summary
Short summary
The strong seasonal increases of Hg in aboveground biomass during the growing season and the lack of changes observed after senescence in this salt marsh ecosystem suggest physiologically controlled Hg uptake pathways. The Hg sources found in marsh aboveground tissues originate from a mix of sources, unlike terrestrial ecosystems, where atmospheric GEM is the main source. Belowground plant tissues mostly take up Hg from soils. Overall, the salt marsh currently serves as a small net Hg sink.
Eleanor Simpson, Debby Ianson, Karen E. Kohfeld, Ana C. Franco, Paul A. Covert, Marty Davelaar, and Yves Perreault
Biogeosciences, 21, 1323–1353, https://doi.org/10.5194/bg-21-1323-2024, https://doi.org/10.5194/bg-21-1323-2024, 2024
Short summary
Short summary
Shellfish aquaculture operates in nearshore areas where data on ocean acidification parameters are limited. We show daily and seasonal variability in pH and saturation states of calcium carbonate at nearshore aquaculture sites in British Columbia, Canada, and determine the contributing drivers of this variability. We find that nearshore locations have greater variability than open waters and that the uptake of carbon by phytoplankton is the major driver of pH and saturation state variability.
S. Alejandra Castillo Cieza, Rachel H. R. Stanley, Pierre Marrec, Diana N. Fontaine, E. Taylor Crockford, Dennis J. McGillicuddy Jr., Arshia Mehta, Susanne Menden-Deuer, Emily E. Peacock, Tatiana A. Rynearson, Zoe O. Sandwith, Weifeng Zhang, and Heidi M. Sosik
Biogeosciences, 21, 1235–1257, https://doi.org/10.5194/bg-21-1235-2024, https://doi.org/10.5194/bg-21-1235-2024, 2024
Short summary
Short summary
The coastal ocean in the northeastern USA provides many services, including fisheries and habitats for threatened species. In summer 2019, a bloom occurred of a large unusual phytoplankton, the diatom Hemiaulus, with nitrogen-fixing symbionts. This led to vast changes in productivity and grazing rates in the ecosystem. This work shows that the emergence of one species can have profound effects on ecosystem function. Such changes may become more prevalent as the ocean warms due to climate change.
Weiyi Tang, Jeff Talbott, Timothy Jones, and Bess B. Ward
EGUsphere, https://doi.org/10.5194/egusphere-2024-638, https://doi.org/10.5194/egusphere-2024-638, 2024
Short summary
Short summary
Wastewater treatment plants (WWTPs) are known to be hotspots of greenhouse gas emissions. However, the impact of WWTPs on the emission of the greenhouse gas N2O in downstream aquatic environments is less constrained. We found spatially and temporally variable but overall higher N2O concentrations and fluxes in waters downstream of WWTPs, pointing to the need for efficient N2O removal in addition to treating nitrogen in WWTPs.
Lennart Thomas Bach, Aaron James Ferderer, Julie LaRoche, and Kai Georg Schulz
EGUsphere, https://doi.org/10.5194/egusphere-2024-692, https://doi.org/10.5194/egusphere-2024-692, 2024
Short summary
Short summary
Ocean Alkalinity Enhancement (OAE) is an emerging marine CO2 removal method but its environmental effects are insufficiently understood. The OAE Pelagic Impact Intercomparison Project (OAEPIIP) provides funding for a standardized and globally replicated microcosm experiment to study the effects of OAE on plankton communities. Here, we provide a detailed manual on the OAEPIIP experiment. We expect OAEPIIP to help build scientific consensus on the effects of OAE on plankton.
Claudine Hauri, Brita Irving, Sam Dupont, Rémi Pagés, Donna D. W. Hauser, and Seth L. Danielson
Biogeosciences, 21, 1135–1159, https://doi.org/10.5194/bg-21-1135-2024, https://doi.org/10.5194/bg-21-1135-2024, 2024
Short summary
Short summary
Arctic marine ecosystems are highly susceptible to impacts of climate change and ocean acidification. We present pH and pCO2 time series (2016–2020) from the Chukchi Ecosystem Observatory and analyze the drivers of the current conditions to get a better understanding of how climate change and ocean acidification could affect the ecological niches of organisms.
William Hiles, Lucy C. Miller, Craig Smeaton, and William E. N. Austin
Biogeosciences, 21, 929–948, https://doi.org/10.5194/bg-21-929-2024, https://doi.org/10.5194/bg-21-929-2024, 2024
Short summary
Short summary
Saltmarsh soils may help to limit the rate of climate change by storing carbon. To understand their impacts, they must be accurately mapped. We use drone data to estimate the size of three saltmarshes in NE Scotland. We find that drone imagery, combined with tidal data, can reliably inform our understanding of saltmarsh size. When compared with previous work using vegetation communities, we find that our most reliable new estimates of stored carbon are 15–20 % smaller than previously estimated.
De'Marcus Robinson, Anh L. D. Pham, David J. Yousavich, Felix Janssen, Frank Wenzhöfer, Eleanor C. Arrington, Kelsey M. Gosselin, Marco Sandoval-Belmar, Matthew Mar, David L. Valentine, Daniele Bianchi, and Tina Treude
Biogeosciences, 21, 773–788, https://doi.org/10.5194/bg-21-773-2024, https://doi.org/10.5194/bg-21-773-2024, 2024
Short summary
Short summary
The present study suggests that high release of ferrous iron from the seafloor of the oxygen-deficient Santa Barabara Basin (California) supports surface primary productivity, creating positive feedback on seafloor iron release by enhancing low-oxygen conditions in the basin.
David J. Yousavich, De'Marcus Robinson, Xuefeng Peng, Sebastian J. E. Krause, Frank Wenzhöfer, Felix Janssen, Na Liu, Jonathan Tarn, Franklin Kinnaman, David L. Valentine, and Tina Treude
Biogeosciences, 21, 789–809, https://doi.org/10.5194/bg-21-789-2024, https://doi.org/10.5194/bg-21-789-2024, 2024
Short summary
Short summary
Declining oxygen (O2) concentrations in coastal oceans can threaten people’s ways of life and food supplies. Here, we investigate how mats of bacteria that proliferate on the seafloor of the Santa Barbara Basin sustain and potentially worsen these O2 depletion events through their unique chemoautotrophic metabolism. Our study shows how changes in seafloor microbiology and geochemistry brought on by declining O2 concentrations can help these mats grow as well as how that growth affects the basin.
Esdoorn Willcox, Marcos Lemes, Thomas Juul-Pedersen, Mikael Kristian Sejr, Johnna Michelle Holding, and Søren Rysgaard
EGUsphere, https://doi.org/10.5194/egusphere-2024-6, https://doi.org/10.5194/egusphere-2024-6, 2024
Short summary
Short summary
For this work we measured the chemistry of seawater from bottles obtained from different depths, lon- and latitudes off the east coast of the Northeast Greenland national park to determine what is influencing concentrations of dissolved CO2. Historically, the region has always been thought to take up CO2 from the atmosphere but we show that it is possible for the region to become a source in late summer and discuss what variables may be related to such changes.
Mallory Ringham, Nathan Hirtle, Cody Shaw, Xi Lu, Julian Herndon, Brendan Carter, and Matthew Eisaman
EGUsphere, https://doi.org/10.5194/egusphere-2024-108, https://doi.org/10.5194/egusphere-2024-108, 2024
Short summary
Short summary
Ocean alkalinity enhancement leverages the large surface area and carbon storage capacity of the oceans to store atmospheric CO2 as dissolved bicarbonate. We monitored CO2 uptake in seawater treated with NaOH to establish operational boundaries for carbon removal experiments. Preliminary results show CO2 equilibration occurred on order of weeks to months, was consistent with values expected from equilibration calculations, and was limited by mineral precipitation at high pH and CaCO3 saturation.
Krysten Rutherford, Katja Fennel, Lina Garcia Suarez, and Jasmin G. John
Biogeosciences, 21, 301–314, https://doi.org/10.5194/bg-21-301-2024, https://doi.org/10.5194/bg-21-301-2024, 2024
Short summary
Short summary
We downscaled two mid-century (~2075) ocean model projections to a high-resolution regional ocean model of the northwest North Atlantic (NA) shelf. In one projection, the NA shelf break current practically disappears; in the other it remains almost unchanged. This leads to a wide range of possible future shelf properties. More accurate projections of coastal circulation features would narrow the range of possible outcomes of biogeochemical projections for shelf regions.
Lennart Thomas Bach
Biogeosciences, 21, 261–277, https://doi.org/10.5194/bg-21-261-2024, https://doi.org/10.5194/bg-21-261-2024, 2024
Short summary
Short summary
Ocean alkalinity enhancement (OAE) is a widely considered marine carbon dioxide removal method. OAE aims to accelerate chemical rock weathering, which is a natural process that slowly sequesters atmospheric carbon dioxide. This study shows that the addition of anthropogenic alkalinity via OAE can reduce the natural release of alkalinity and, therefore, reduce the efficiency of OAE for climate mitigation. However, the additionality problem could be mitigated via a variety of activities.
Tsuneo Ono, Daisuke Muraoka, Masahiro Hayashi, Makiko Yorifuji, Akihiro Dazai, Shigeyuki Omoto, Takehiro Tanaka, Tomohiro Okamura, Goh Onitsuka, Kenji Sudo, Masahiko Fujii, Ryuji Hamanoue, and Masahide Wakita
Biogeosciences, 21, 177–199, https://doi.org/10.5194/bg-21-177-2024, https://doi.org/10.5194/bg-21-177-2024, 2024
Short summary
Short summary
We carried out parallel year-round observations of pH and related parameters in five stations around the Japan coast. It was found that short-term acidified situations with Omega_ar less than 1.5 occurred at four of five stations. Most of such short-term acidified events were related to the short-term low salinity event, and the extent of short-term pH drawdown at high freshwater input was positively correlated with the nutrient concentration of the main rivers that flow into the coastal area.
Riel Carlo O. Ingeniero, Gesa Schulz, and Hermann W. Bange
EGUsphere, https://doi.org/10.5194/egusphere-2023-3009, https://doi.org/10.5194/egusphere-2023-3009, 2023
Short summary
Short summary
Our research is the first to measure dissolved NO concentrations in temperate estuarine waters, providing insights into its distribution under varying conditions and enhancing our understanding of its production processes. We found that the lower Elbe Estuary and the Hamburg Port area were a source of atmospheric NO. Our results suggest that NO in the lower Elbe Estuary was produced during nitrification, whereas NO in the Hamburg Port area was produced during nitrifier-denitrification.
K. Mareike Paul, Martijn Hermans, Sami A. Jokinen, Inda Brinkmann, Helena L. Filipsson, and Tom Jilbert
Biogeosciences, 20, 5003–5028, https://doi.org/10.5194/bg-20-5003-2023, https://doi.org/10.5194/bg-20-5003-2023, 2023
Short summary
Short summary
Seawater naturally contains trace metals such as Mo and U, which accumulate under low oxygen conditions on the seafloor. Previous studies have used sediment Mo and U contents as an archive of changing oxygen concentrations in coastal waters. Here we show that in fjords the use of Mo and U for this purpose may be impaired by additional processes. Our findings have implications for the reliable use of Mo and U to reconstruct oxygen changes in fjords.
Hannah Sharpe, Michel Gosselin, Catherine Lalande, Alexandre Normandeau, Jean-Carlos Montero-Serrano, Khouloud Baccara, Daniel Bourgault, Owen Sherwood, and Audrey Limoges
Biogeosciences, 20, 4981–5001, https://doi.org/10.5194/bg-20-4981-2023, https://doi.org/10.5194/bg-20-4981-2023, 2023
Short summary
Short summary
We studied the impact of submarine canyon processes within the Pointe-des-Monts system on biogenic matter export and phytoplankton assemblages. Using data from three oceanographic moorings, we show that the canyon experienced two low-amplitude sediment remobilization events in 2020–2021 that led to enhanced particle fluxes in the deep-water column layer > 2.6 km offshore. Sinking phytoplankton fluxes were lower near the canyon compared to background values from the lower St. Lawrence Estuary.
Dewi Langlet, Florian Mermillod-Blondin, Noémie Deldicq, Arthur Bauville, Gwendoline Duong, Lara Konecny, Mylène Hugoni, Lionel Denis, and Vincent M. P. Bouchet
Biogeosciences, 20, 4875–4891, https://doi.org/10.5194/bg-20-4875-2023, https://doi.org/10.5194/bg-20-4875-2023, 2023
Short summary
Short summary
Benthic foraminifera are single-cell marine organisms which can move in the sediment column. They were previously reported to horizontally and vertically transport sediment particles, yet the impact of their motion on the dissolved fluxes remains unknown. Using microprofiling, we show here that foraminiferal burrow formation increases the oxygen penetration depth in the sediment, leading to a change in the structure of the prokaryotic community.
Masahiko Fujii, Ryuji Hamanoue, Lawrence Patrick Cases Bernardo, Tsuneo Ono, Akihiro Dazai, Shigeyuki Oomoto, Masahide Wakita, and Takehiro Tanaka
Biogeosciences, 20, 4527–4549, https://doi.org/10.5194/bg-20-4527-2023, https://doi.org/10.5194/bg-20-4527-2023, 2023
Short summary
Short summary
This is the first study of the current and future impacts of climate change on Pacific oyster farming in Japan. Future coastal warming and acidification may affect oyster larvae as a result of longer exposure to lower-pH waters. A prolonged spawning period may harm oyster processing by shortening the shipping period and reducing oyster quality. To minimize impacts on Pacific oyster farming, in addition to mitigation measures, local adaptation measures may be required.
Marlena Szeligowska, Déborah Benkort, Anna Przyborska, Mateusz Moskalik, Bernabé Moreno, Emilia Trudnowska, and Katarzyna Błachowiak-Samołyk
Biogeosciences Discuss., https://doi.org/10.5194/bg-2023-162, https://doi.org/10.5194/bg-2023-162, 2023
Revised manuscript accepted for BG
Short summary
Short summary
European Arctic experiences rapid regional warming resulting in the retreat of glaciers terminating in the sea onto land. Due to this process, area of one of the well-studied fjords, Hornsund, increased by 100 km2 and 38 %. Using improved mathematical model, we estimated that despite some negative consequences of glacial meltwater release such newly ice-free area markedly contribute to atmospheric carbon uptake and become efficient carbon sinks.
Taketoshi Kodama, Atsushi Nishimoto, Ken-ichi Nakamura, Misato Nakae, Naoki Iguchi, Yosuke Igeta, and Yoichi Kogure
Biogeosciences, 20, 3667–3682, https://doi.org/10.5194/bg-20-3667-2023, https://doi.org/10.5194/bg-20-3667-2023, 2023
Short summary
Short summary
Carbon and nitrogen are essential elements for organisms; their stable isotope ratios (13C : 12C, 15N : 14N) are useful tools for understanding turnover and movement in the ocean. In the Sea of Japan, the environment is rapidly being altered by human activities. The 13C : 12C of small organic particles is increased by active carbon fixation, and phytoplankton growth increases the values. The 15N : 14N variations suggest that nitrates from many sources contribute to organic production.
Aubin Thibault de Chanvalon, George W. Luther, Emily R. Estes, Jennifer Necker, Bradley M. Tebo, Jianzhong Su, and Wei-Jun Cai
Biogeosciences, 20, 3053–3071, https://doi.org/10.5194/bg-20-3053-2023, https://doi.org/10.5194/bg-20-3053-2023, 2023
Short summary
Short summary
The intensity of the oceanic trap of CO2 released by anthropogenic activities depends on the alkalinity brought by continental weathering. Between ocean and continent, coastal water and estuaries can limit or favour the alkalinity transfer. This study investigate new interactions between dissolved metals and alkalinity in the oxygen-depleted zone of estuaries.
Joonas J. Virtasalo, Peter Österholm, and Eero Asmala
Biogeosciences, 20, 2883–2901, https://doi.org/10.5194/bg-20-2883-2023, https://doi.org/10.5194/bg-20-2883-2023, 2023
Short summary
Short summary
We mixed acidic metal-rich river water from acid sulfate soils and seawater in the laboratory to study the flocculation of dissolved metals and organic matter in estuaries. Al and Fe flocculated already at a salinity of 0–2 to large organic flocs (>80 µm size). Precipitation of Al and Fe hydroxide flocculi (median size 11 µm) began when pH exceeded ca. 5.5. Mn transferred weakly to Mn hydroxides and Co to the flocs. Up to 50 % of Cu was associated with the flocs, irrespective of seawater mixing.
Moritz Baumann, Allanah Joy Paul, Jan Taucher, Lennart Thomas Bach, Silvan Goldenberg, Paul Stange, Fabrizio Minutolo, and Ulf Riebesell
Biogeosciences, 20, 2595–2612, https://doi.org/10.5194/bg-20-2595-2023, https://doi.org/10.5194/bg-20-2595-2023, 2023
Short summary
Short summary
The sinking velocity of marine particles affects how much atmospheric CO2 is stored inside our oceans. We measured particle sinking velocities in the Peruvian upwelling system and assessed their physical and biochemical drivers. We found that sinking velocity was mainly influenced by particle size and porosity, while ballasting minerals played only a minor role. Our findings help us to better understand the particle sinking dynamics in this highly productive marine system.
Kyle E. Hinson, Marjorie A. M. Friedrichs, Raymond G. Najjar, Maria Herrmann, Zihao Bian, Gopal Bhatt, Pierre St-Laurent, Hanqin Tian, and Gary Shenk
Biogeosciences, 20, 1937–1961, https://doi.org/10.5194/bg-20-1937-2023, https://doi.org/10.5194/bg-20-1937-2023, 2023
Short summary
Short summary
Climate impacts are essential for environmental managers to consider when implementing nutrient reduction plans designed to reduce hypoxia. This work highlights relative sources of uncertainty in modeling regional climate impacts on the Chesapeake Bay watershed and consequent declines in bay oxygen levels. The results demonstrate that planned water quality improvement goals are capable of reducing hypoxia levels by half, offsetting climate-driven impacts on terrestrial runoff.
Linquan Mu, Jaime B. Palter, and Hongjie Wang
Biogeosciences, 20, 1963–1977, https://doi.org/10.5194/bg-20-1963-2023, https://doi.org/10.5194/bg-20-1963-2023, 2023
Short summary
Short summary
Enhancing ocean alkalinity accelerates carbon dioxide removal from the atmosphere. We hypothetically added alkalinity to the Amazon River and examined the increment of the carbon uptake by the Amazon plume. We also investigated the minimum alkalinity addition in which this perturbation at the river mouth could be detected above the natural variability.
Karl M. Attard, Anna Lyssenko, and Iván F. Rodil
Biogeosciences, 20, 1713–1724, https://doi.org/10.5194/bg-20-1713-2023, https://doi.org/10.5194/bg-20-1713-2023, 2023
Short summary
Short summary
Aquatic plants produce a large amount of organic matter through photosynthesis that, following erosion, is deposited on the seafloor. In this study, we show that plant detritus can trigger low-oxygen conditions (hypoxia) in shallow coastal waters, making conditions challenging for most marine animals. We propose that the occurrence of hypoxia may be underestimated because measurements typically do not consider the region closest to the seafloor, where detritus accumulates.
M. James McLaughlin, Cindy Bessey, Gary A. Kendrick, John Keesing, and Ylva S. Olsen
Biogeosciences, 20, 1011–1026, https://doi.org/10.5194/bg-20-1011-2023, https://doi.org/10.5194/bg-20-1011-2023, 2023
Short summary
Short summary
Coral reefs face increasing pressures from environmental change at present. The coral reef framework is produced by corals and calcifying algae. The Kimberley region of Western Australia has escaped land-based anthropogenic impacts. Specimens of the dominant coral and algae were collected from Browse Island's reef platform and incubated in mesocosms to measure calcification and production patterns of oxygen. This study provides important data on reef building and climate-driven effects.
Patricia Ayón Dejo, Elda Luz Pinedo Arteaga, Anna Schukat, Jan Taucher, Rainer Kiko, Helena Hauss, Sabrina Dorschner, Wilhelm Hagen, Mariona Segura-Noguera, and Silke Lischka
Biogeosciences, 20, 945–969, https://doi.org/10.5194/bg-20-945-2023, https://doi.org/10.5194/bg-20-945-2023, 2023
Short summary
Short summary
Ocean upwelling regions are highly productive. With ocean warming, severe changes in upwelling frequency and/or intensity and expansion of accompanying oxygen minimum zones are projected. In a field experiment off Peru, we investigated how different upwelling intensities affect the pelagic food web and found failed reproduction of dominant zooplankton. The changes projected could severely impact the reproductive success of zooplankton communities and the pelagic food web in upwelling regions.
Mathilde Jutras, Alfonso Mucci, Gwenaëlle Chaillou, William A. Nesbitt, and Douglas W. R. Wallace
Biogeosciences, 20, 839–849, https://doi.org/10.5194/bg-20-839-2023, https://doi.org/10.5194/bg-20-839-2023, 2023
Short summary
Short summary
The deep waters of the lower St Lawrence Estuary and gulf have, in the last decades, experienced a strong decline in their oxygen concentration. Below 65 µmol L-1, the waters are said to be hypoxic, with dire consequences for marine life. We show that the extent of the hypoxic zone shows a seven-fold increase in the last 20 years, reaching 9400 km2 in 2021. After a stable period at ~ 65 µmol L⁻¹ from 1984 to 2019, the oxygen level also suddenly decreased to ~ 35 µmol L-1 in 2020.
Sachi Umezawa, Manami Tozawa, Yuichi Nosaka, Daiki Nomura, Hiroji Onishi, Hiroto Abe, Tetsuya Takatsu, and Atsushi Ooki
Biogeosciences, 20, 421–438, https://doi.org/10.5194/bg-20-421-2023, https://doi.org/10.5194/bg-20-421-2023, 2023
Short summary
Short summary
We conducted repetitive observations in Funka Bay, Japan, during the spring bloom 2019. We found nutrient concentration decreases in the dark subsurface layer during the bloom. Incubation experiments confirmed that diatoms could consume nutrients at a substantial rate, even in darkness. We concluded that the nutrient reduction was mainly caused by nutrient consumption by diatoms in the dark.
Dirk Jong, Lisa Bröder, Tommaso Tesi, Kirsi H. Keskitalo, Nikita Zimov, Anna Davydova, Philip Pika, Negar Haghipour, Timothy I. Eglinton, and Jorien E. Vonk
Biogeosciences, 20, 271–294, https://doi.org/10.5194/bg-20-271-2023, https://doi.org/10.5194/bg-20-271-2023, 2023
Short summary
Short summary
With this study, we want to highlight the importance of studying both land and ocean together, and water and sediment together, as these systems function as a continuum, and determine how organic carbon derived from permafrost is broken down and its effect on global warming. Although on the one hand it appears that organic carbon is removed from sediments along the pathway of transport from river to ocean, it also appears to remain relatively ‘fresh’, despite this removal and its very old age.
Georgia Filippi, Manos Dassenakis, Vasiliki Paraskevopoulou, and Konstantinos Lazogiannis
Biogeosciences, 20, 163–189, https://doi.org/10.5194/bg-20-163-2023, https://doi.org/10.5194/bg-20-163-2023, 2023
Short summary
Short summary
The pollution of the western Saronikos Gulf from heavy metals has been examined through the study of marine sediment cores. It is a deep gulf (maximum depth 440 m) near Athens affected by industrial and volcanic activity. Eight cores were received from various stations and depths and analysed for their heavy metal content and geochemical characteristics. The results were evaluated by using statistical methods, environmental indicators and comparisons with old data.
Jing He and Michael D. Tyka
Biogeosciences, 20, 27–43, https://doi.org/10.5194/bg-20-27-2023, https://doi.org/10.5194/bg-20-27-2023, 2023
Short summary
Short summary
Recently, ocean alkalinity enhancement (OAE) has gained interest as a scalable way to address the urgent need for negative CO2 emissions. In this paper we examine the capacity of different coastlines to tolerate alkalinity enhancement and the time scale of CO2 uptake following the addition of a given quantity of alkalinity. The results suggest that OAE has significant potential and identify specific favorable and unfavorable coastlines for its deployment.
Arnaud Laurent, Haiyan Zhang, and Katja Fennel
Biogeosciences, 19, 5893–5910, https://doi.org/10.5194/bg-19-5893-2022, https://doi.org/10.5194/bg-19-5893-2022, 2022
Short summary
Short summary
The Changjiang is the main terrestrial source of nutrients to the East China Sea (ECS). Nutrient delivery to the ECS has been increasing since the 1960s, resulting in low oxygen (hypoxia) during phytoplankton decomposition in summer. River phosphorus (P) has increased less than nitrogen, and therefore, despite the large nutrient delivery, phytoplankton growth can be limited by the lack of P. Here, we investigate this link between P limitation, phytoplankton production/decomposition, and hypoxia.
Coline Poppeschi, Guillaume Charria, Anne Daniel, Romaric Verney, Peggy Rimmelin-Maury, Michaël Retho, Eric Goberville, Emilie Grossteffan, and Martin Plus
Biogeosciences, 19, 5667–5687, https://doi.org/10.5194/bg-19-5667-2022, https://doi.org/10.5194/bg-19-5667-2022, 2022
Short summary
Short summary
This paper aims to understand interannual changes in the initiation of the phytoplankton growing period (IPGP) in the current context of global climate changes over the last 20 years. An important variability in the timing of the IPGP is observed with a trend towards a later IPGP during this last decade. The role and the impact of extreme events (cold spells, floods, and wind burst) on the IPGP is also detailed.
Lin Yang, Jing Zhang, Anja Engel, and Gui-Peng Yang
Biogeosciences, 19, 5251–5268, https://doi.org/10.5194/bg-19-5251-2022, https://doi.org/10.5194/bg-19-5251-2022, 2022
Short summary
Short summary
Enrichment factors of dissolved organic matter (DOM) in the eastern marginal seas of China exhibited a significant spatio-temporal variation. Photochemical and enrichment processes co-regulated DOM enrichment in the sea-surface microlayer (SML). Autochthonous DOM was more frequently enriched in the SML than terrestrial DOM. DOM in the sub-surface water exhibited higher aromaticity than that in the SML.
Mona Norbisrath, Johannes Pätsch, Kirstin Dähnke, Tina Sanders, Gesa Schulz, Justus E. E. van Beusekom, and Helmuth Thomas
Biogeosciences, 19, 5151–5165, https://doi.org/10.5194/bg-19-5151-2022, https://doi.org/10.5194/bg-19-5151-2022, 2022
Short summary
Short summary
Total alkalinity (TA) regulates the oceanic storage capacity of atmospheric CO2. TA is also metabolically generated in estuaries and influences coastal carbon storage through its inflows. We used water samples and identified the Hamburg port area as the one with highest TA generation. Of the overall riverine TA load, 14 % is generated within the estuary. Using a biogeochemical model, we estimated potential effects on the coastal carbon storage under possible anthropogenic and climate changes.
Le Zhang and Z. George Xue
Biogeosciences, 19, 4589–4618, https://doi.org/10.5194/bg-19-4589-2022, https://doi.org/10.5194/bg-19-4589-2022, 2022
Short summary
Short summary
We adopt a high-resolution carbon model for the Gulf of Mexico (GoM) and calculate the decadal trends of important carbon system variables in the GoM from 2001 to 2019. The GoM surface CO2 values experienced a steady increase over the past 2 decades, and the ocean surface pH is declining. Although carbonate saturation rates remain supersaturated with aragonite, they show a slightly decreasing trend. The northern GoM is a stronger carbon sink than we thought.
Cited articles
Alkire, M. B., D'Asaro, E., Lee, C., Jane Perry, M., Gray, A., Cetinić,
I., Briggs, N., Rehm, E., Kallin, E., Kaiser, J., and González-Posada,
A.: Estimates of net community production and export using high-resolution,
Lagrangian measurements of O2, NO3, and POC through the evolution of a
spring diatom bloom in the North Atlantic, Deep-Sea Res. Pt. I, 64, 157–174,
https://doi.org/10.1016/j.dsr.2012.01.012, 2012.
Alkire, M. B., Lee, C., D'Asaro, E., Perry, M. J., Nathan Briggs, I. C., and
Gray, A.: Net community production and export from Seaglider measurements in
the North Atlantic after the spring bloom, J. Geophys. Res.-Oceans, 119,
6121–6139, https://doi.org/10.1002/2014JC010105, 2014.
Anderson, L. A. and Sarmiento, J. L.: Redfield ratios of remineralization
determined by nutrient data analysis, Global Biogeochem. Cy., 8,
65–80, https://doi.org/10.1029/93GB03318, 1994.
Beale, R., Johnson, M. T., Liss, P. S., and Nightingale, P. D.: Air-Sea
Exchange of Marine Trace Gases, in: Treatise On Geochemistry, edited by:
Holland, H. D. and Turekian, K. K., chap. 603, Elsevier Science &
Technology, 2nd edn.,
https://doi.org/10.1016/B978-0-08-095975-7.00603-3, 2013.
Benson, B. B. and Krause, D.: The concentration and isotopic fractionation of
oxygen dissolved in freshwater and seawater in equilibrium with the
atmosphere, Limnol. Oceanogr., 29, 620–632,
https://doi.org/10.4319/lo.1984.29.3.0620, 1984.
Blauw, A. N., Benincà, E., Laane, R. W. P. M., Greenwood, N., and
Huisman, J.: Dancing with the Tides: Fluctuations of Coastal Phytoplankton
Orchestrated by Different Oscillatory Modes of the Tidal Cycle, PLoS ONE, 7,
e49319, https://doi.org/10.1371/journal.pone.0049319, 2012.
Bozec, Y., Thomas, H., Schiettecatte, L.-S., Borges, A. V., Elkalay, K., and
de Baar, H. J. W.: Assessment of the processes controlling the seasonal
variations of dissolved inorganic carbon in the North Sea, Limnol. Oceanogr.,
51, 2746–2762, https://doi.org/10.4319/lo.2006.51.6.2746, 2006.
Braeckman, U., Van Colen, C., Guilini, K., Van Gansbeke, D., Soetaert, K.,
Vincx, M., and Vanaverbeke, J.: Empirical evidence reveals seasonally
dependent reduction in nitrification in coastal sediments subjected to near
future ocean acidification, PloS one, 9, e108153,
https://doi.org/10.1371/journal.pone.0108153, 2014.
Bushinsky, S. M. and Emerson, S.: A method for in-situ calibration of
Aanderaa oxygen sensors on surface moorings, Mar. Chem., 155, 22–28, 2013.
Carnell, R.: lhs: Latin Hypercube Samples,
https://cran.r-project.org/web/packages/lhs/, 2012.
D'Asaro, E. A. and McNeil, C.: Calibration and Stability of Oxygen Sensors on
Autonomous Floats, J. Atmos. Ocean. Technol., 30,
1896–1906, https://doi.org/10.1175/JTECH-D-12-00222.1, 2013.
Duarte, C. M., Regaudie-de Gioux, A., Arrieta, J. M., Delgado-Huertas, A.,
and Agustí, S.: The oligotrophic ocean is heterotrophic., Annu. Rev.
Mar. Sci., 5, 551–69, https://doi.org/10.1146/annurev-marine-121211-172337, 2013.
Ducklow, H. W. and Doney, S. C.: What is the metabolic state of the
oligotrophic ocean? A debate., Annu. Rev. Mar. Sci., 5, 525–33,
https://doi.org/10.1146/annurev-marine-121211-172331, 2013.
Emerson, S.: Seasonal oxygen cycles and biological new production in surface
waters of the subarctic Pacific Ocean, J. Geophys. Res., 92, 6535,
https://doi.org/10.1029/JC092iC06p06535, 1987.
Emerson, S.: Annual net community production and the biological carbon flux
in the ocean, Global Biogeochem. Cy., 28, 1–12, https://doi.org/10.1002/2013GB004680,
2014.
Emerson, S. and Stump, C.: Net biological oxygen production in the ocean-II:
Remote in situ measurements of O2 and N2 in subarctic pacific surface
waters, Deep-Sea Res. Pt. I, 57, 1255–1265, https://doi.org/10.1016/j.dsr.2010.06.001,
2010.
Emerson, S., Stump, C., and Nicholson, D.: Net biological oxygen production
in the ocean: Remote in situ measurements of O2 and N2 in surface
waters, Global Biogeochem. Cy., 22, GB3023, https://doi.org/10.1029/2007GB003095, 2008.
Fernand, L., Weston, K., Morris, T., Greenwood, N., Brown, J., and Jickells,
T.: The contribution of the deep chlorophyll maximum to primary production in
a seasonally stratified shelf sea, the North Sea, Biogeochemistry, 113,
153–166, https://doi.org/10.1007/s10533-013-9831-7, 2013.
Foden, J., Sivyer, D., Mills, D., and Devlin, M.: Spatial and temporal
distribution of chromophoric dissolved organic matter (CDOM) fluorescence and
its contribution to light attenuation in UK waterbodies, Estuar. Coast. Shelf
Sci., 79, 707–717, https://doi.org/10.1016/j.ecss.2008.06.015, 2008.
Foden, J., Devlin, M. J., Mills, D. K., and Malcolm, S. J.: Searching for
undesirable disturbance: an application of the OSPAR eutrophication
assessment method to marine waters of England and Wales, Biogeochemistry,
106, 157–175, https://doi.org/10.1007/s10533-010-9475-9, 2010.
Frew, N. M.: The role of organic films in air-sea gas exchange, in: The Sea
Surface and Global Change, edited by: Liss, P. S. and Duce, R. A., 121–172,
Cambridge University Press, https://doi.org/10.1017/CBO9780511525025.006, 1997.
García, H. E. and Gordon, L. I.: Oxygen solubility in seawater: Better
fitting equations, Limnol. Oceanogr., 37, 1307–1312,
https://doi.org/10.4319/lo.1992.37.6.1307, 1992.
Greenwood, N., Parker, E. R., Fernand, L., Sivyer, D. B., Weston, K.,
Painting, S. J., Kröger, S., Forster, R. M., Lees, H. E., Mills, D. K.,
and Laane, R. W. P. M.: Detection of low bottom water oxygen concentrations
in the North Sea; implications for monitoring and assessment of ecosystem
health, Biogeosciences, 7, 1357–1373, https://doi.org/10.5194/bg-7-1357-2010, 2010.
Guo, X., Cai, W.-J., Huang, W.-J., Wang, Y., Chen, F., Murrell, M. C.,
Lohrenz, S. E., Jiang, L.-Q., Dai, M., Hartmann, J., Lin, Q., and Culp, R.:
Carbon dynamics and community production in the Mississippi River plume,
Limnol. Oceanogr., 57, 1–17, https://doi.org/10.4319/lo.2012.57.1.0001, 2012.
Hansen, H. P.: Determination of oxygen, in: Methods of Seawater Analysis,
edited by Grasshoff, K., Kremling, K., and Ehrhardt, M., chap. 4, Wiley-VCH
Verlag GmbH, https://doi.org/10.1002/9783527613984.ch4, 1999.
Hedges, J., Baldock, J., Gélinas, Y., Lee, C., Peterson, M., and
Wakeham, S.: The biochemical and elemental compositions of marine plankton: A
NMR perspective, Mar. Chem., 78, 47–63, https://doi.org/10.1016/S0304-4203(02)00009-9,
2002.
Helm, I., Jalukse, L., Vilbaste, M., and Leito, I.: Micro-Winkler titration
method for dissolved oxygen concentration measurement, Anal. Chim. Ac., 648,
167–73, https://doi.org/10.1016/j.aca.2009.06.067, 2009.
Hull, T. and Johnson, M.: Airsea: R tools for air-sea gas exchange studies
(0.2), Zenodo, https://doi.org/10.5281/zenodo.45656, 2015.
Jickells, T. D.: Nutrient Biogeochemistry of the Coastal Zone, Science, 281,
217–222, https://doi.org/10.1126/science.281.5374.217, 1998.
Kaiser, J., Reuer, M. K., Barnett, B., and Bende, M. L.: Marine productivity
estimates from continuous O2/Ar ratio measurements by membrane inlet mass
spectrometry, Geophys. Res. Lett., 32, L19605, https://doi.org/10.1029/2005GL023459,
2005.
Kaiser, J. and Gist, N.: The metabolic balance of the surface ocean along two
Atlantic Meridional Transects, Geophysical Research Abstracts, 8, 08599,
2006.
Karl, D. M., Laws, E. A., Morris, P., Williams, P. J. L., and Emerson, S.:
Global carbon cycle: metabolic balance of the open sea, Nature, 426, 32,
https://doi.org/10.1038/426032a, 2003.
Keeling, R. F. and Shertz, S. R.: Seasonal and interannual variations in
atmospheric oxygen and implications for the global carbon cycle, Nature, 358,
723–727, https://doi.org/10.1038/358723a0, 1992.
Kitidis, V., Tilstone, G. H., Serret, P., Smyth, T. J., Torres, R., and
Robinson, C.: Oxygen photolysis in the Mauritanian upwelling: Implications
for net community production, Limnol. Oceanogr., 59, 299–310,
https://doi.org/10.4319/lo.2014.59.2.0299, 2014.
Large, W. G. and Pond, S.: Open Ocean Momentum Flux Measurements in Moderate
to Strong Winds, J. Phys. Oceanogr., 11, 324–336,
https://doi.org/10.1175/1520-0485(1981)011<0324:OOMFMI>2.0.CO;2, 1981.
Liang, J.-H., Deutsch, C., McWilliams, J. C., Baschek, B., Sullivan, P. P.,
and Chiba, D.: Parameterizing bubble-mediated air-sea gas exchange and its
effect on ocean ventilation, Global Biogeochem. Cy., 894–905,
https://doi.org/10.1002/gbc.20080, 2013.
Liu, W., Tang, W., and Xie, X.: Wind Power at Sea as Observed from Space, in:
Wind power, edited by: Muyeen, S. M., June, chap. 14, InTech,
https://doi.org/10.5772/8344, 2010.
Marino, S., Hogue, I. B., Ray, C. J., and Kirschner, D. E.: A methodology for
performing global uncertainty and sensitivity analysis in systems biology,
https://doi.org/10.1016/j.jtbi.2008.04.011, 2008.
McNeil, C. L. and D'Asaro, E. a.: A calibration equation for oxygen optodes
based on physical properties of the sensing foil, Limnol. Oceanogr., Methods,
12, 139–154, https://doi.org/10.4319/lom.2014.12.139, 2014.
Mills, D., Greenwood, N., Kröger, S., Devlin, M., Sivyer, D., Pearce,
D., Cutchey, S., and Malcolm, S.: New approaches to improve the detection of
eutrophication in UK coastal waters, Environmental Research, Engineering and
Management, 2, 36–42, 2005.
Mouriño-Carballido, B. and Anderson, L. a.: Net community production of
oxygen derived from in vitro and in situ 1-D modeling techniques in a
cyclonic mesoscale eddy in the Sargasso Sea, Biogeosciences, 6, 1799–1810,
https://doi.org/10.5194/bg-6-1799-2009, 2009.
Neukermans, G., Ruddick, K. G., and Greenwood, N.: Diurnal variability of
turbidity and light attenuation in the southern North Sea from the SEVIRI
geostationary sensor, Remote Sens. Environ., 124, 564–580,
https://doi.org/10.1016/j.rse.2012.06.003, 2012.
Nicholson, D., Emerson, S., and Eriksen, C. C.: Net community production in
the deep euphotic zone of the subtropical North Pacific gyre from glider
surveys, Limnol. Oceanogr., 53, 2226–2236,
https://doi.org/10.4319/lo.2008.53.5_part_2.2226, 2008.
Nightingale, P. D., Malin, G., Law, C. S., Watson, A. J., Liss, P. S.,
Liddicoat, M. I., Boutin, J., and Upstill-Goddard, R. C.: In situ evaluation
of air-sea gas exchange parameterizations using novel conservative and
volatile tracers, Global Biogeochem. Cy., 14, 373–387,
https://doi.org/10.1029/1999GB900091, 2000.
Nunes, T., Stevenson, M., Heuer, C., Marshall, J., Sanchez, J., Thornton, R.,
Reiczigel, J., Robison-Cox, J., Sebastiani, P., Solymos, P., and Yoshida, K.:
epiR: An R package for the analysis of epidemiological data, 2014.
Ostle, C., Johnson, M., Landschützer, P., Schuster, U., Hartman, S.,
Hull, T., and Robinson, C.: Net Community Production in the North Atlantic
Ocean derived from Volunteer Observing Ship data, Global Biogeochem. Cy.,
80–95, https://doi.org/10.1002/2014GB004868, 2014.
Palevsky, H. I., Ribalet, F., Swalwell, J. E., Cosca, C. E., Cokelet, E. D.,
Feely, R. A., Armbrust, E. V., and Quay, P. D.: The influence of net
community production and phytoplankton community structure on CO2 uptake
in the Gulf of Alaska, Global Biogeochem. Cy., 27, 664–676,
https://doi.org/10.1002/gbc.20058, 2013.
Platt, T. and Sathyendranath, S.: Ecological indicators for the pelagic zone
of the ocean from remote sensing, Remote Sens. Environ., 112, 3426–3436,
https://doi.org/10.1016/j.rse.2007.10.016, 2008.
Polton, J. A., Palmer, M. R., and Howarth, M.: The vertical structure of
time-mean estuarine circulation in a shallow, rotating, semi-enclosed coastal
bay: A Liverpool Bay case study with application for monitoring, Cont.
Shelf Res., 59, 115–126, 2013.
Pujol, G., Iooss, B., and Janon, A.: Sensitivity,
https://cran.r-project.org/web/packages/sensitivity/, 2014.
Reuer, M. K., Barnett, B. a., Bender, M. L., Falkowski, P. G., and Hendricks,
M. B.: New estimates of Southern Ocean biological production rates from O2/Ar
ratios and the triple isotope composition of O2, Deep-Sea Res. Pt. I, 54,
951–974, https://doi.org/10.1016/j.dsr.2007.02.007, 2007.
Riser, S. C. and Johnson, K. S.: Net production of oxygen in the subtropical
ocean., Nature, 451, 323–5, https://doi.org/10.1038/nature06441, 2008.
Saltelli, A., Chan, K., and Scott, E. M.: Sensitivity analysis, J. Wiley &
sons, 2000.
Sanchez, M. A. and Blower, S. M.: Uncertainty and sensitivity analysis of the
basic reproductive rate. Tuberculosis as an example, Am. J. Epidemiol., 145,
1127–37, 1997.
Stanley, R. H. R., Jenkins, W. J., Lott, D. E., and Doney, S. C.: Noble gas
constraints on air-sea gas exchange and bubble fluxes, J. Geophys. Res., 114,
C11020, https://doi.org/10.1029/2009JC005396, 2009.
Stanley, R. H. R., Kirkpatrick, J. B., Cassar, N., Barnett, B. a., and
Bender, M. L.: Net community production and gross primary production rates in
the western equatorial Pacific, Global Biogeochem. Cy., 24, GB4001,
https://doi.org/10.1029/2009GB003651, 2010.
Stocki, R.: A method to improve design reliability using optimal Latin
hypercube sampling, Computer Assisted Mechanics and Engineering Sciences, 12,
393–411, 2005.
Sullivan, P. P., Romero, L., McWilliams, J. C., and Melville, W. K.:
Transient Evolution of Langmuir Turbulence in Ocean Boundary Layers Driven by
Hurricane Winds and Waves, J. Phys. Oceanogr., 42, 1959–1980,
https://doi.org/10.1175/JPO-D-12-025.1, 2012.
Takagaki, N. and Komori, S.: Effects of rainfall on mass transfer across the
air-water interface, J. Geophys. Res., 112, C06006,
https://doi.org/10.1029/2006JC003752, 2007.
Tengberg, A., Hovdenes, J., Andersson, H., Brocandel, O., Diaz, R., Hebert,
D., Arnerich, T., Huber, C., Kortzinger, A., Khripounoff, A., Rey, F.,
Ronning, C., Schimanski, J., Sommer, S., and Stangelmayer, A.: Evaluation of
a lifetime-based optode to measure oxygen in aquatic systems, Limnol.
Oceanogr.-Methods, 4, 7–17, 2006.
Thomas, A., Byrne, D., and Weatherbee, R.: Coastal sea surface temperature
variability from Landsat infrared data, Remote Sens. Environ., 81, 262–272,
https://doi.org/10.1016/S0034-4257(02)00004-4, 2002.
Tijssen, S. and Eijgenraam, A.: Primary and community production in the
southern bight of the north sea deduced from oxygen concentration variations
in the spring of 1980, Neth. J. Sea Res., 16, 247–259,
https://doi.org/10.1016/0077-7579(82)90034-5, 1982.
Tilstone, G. H., Xie, Y., Robinson, C., Serret, P., Raitsos, D. E., Powell,
T., Aranguren-Gassis, M., Garcia-Martin, E. E., Kitidis, V.: Satellite
estimates of net community production indicate predominance of net autotrophy
in the Atlantic Ocean, Remote Sens. Environ., 164, 254–269,
https://doi.org/10.1016/j.rse.2015.03.017, 2015.
Trimmer, M., Nedwell, D., Sivyer, D., and Malcolm, S.: Seasonal benthic
organic matter mineralisation measured by oxygen uptake and denitrification
along a transect of the inner and outer River Thames estuary, UK, Mar.
Ecol.-Progr. Ser., 197, 103–119, https://doi.org/10.3354/meps197103, 2000.
Wanninkhof, R.: Relationship between wind speed and gas exchange over the
ocean revisited, Limnol. Oceanogr.-Methods, 12, 351–362,
https://doi.org/10.4319/lom.2014.12.351, 2014.
Wanninkhof, R., Asher, W. E., Ho, D. T., Sweeney, C., and McGillis, W. R.:
Advances in Quantifying Air-Sea Gas Exchange and Environmental Forcing*,
Annu. Rev. Mar. Sci., 1, 213–244,
https://doi.org/10.1146/annurev.marine.010908.163742, 2009.
Weston, K.: Primary production in the deep chlorophyll maximum of the central
North Sea, J. Plankton Res., 27, 909–922, https://doi.org/10.1093/plankt/fbi064, 2005.
Weston, K., Greenwood, N., Fernand, L., Pearce, D. J., and Sivyer, D. B.:
Environmental controls on phytoplankton community composition in the Thames
plume, UK, J. Sea Res., 60, 246–254, https://doi.org/10.1016/j.seares.2008.09.003,
2008.
Wikner, J., Panigrahi, S., Nydahl, A., Lundberg, E., Bamstedt, U., and
Tengberg, A.: Precise continuous measurements of pelagic respiration in
coastal waters with Oxygen Optodes, Limnol. Oceanogr.-Methods, 11, 1–15,
https://doi.org/10.4319/lom.2013.11.1, 2013.
Wiliams, P. J. L. and Jenkinson, N. W.: A transportable
microprocessor-controlled precise Winkler titration suitable for field
station and shipboard use, Limnol. Oceanogr., 27, 576–584,
https://doi.org/10.4319/lo.1982.27.3.0576, 1982.
Williams, P. J. L.: On the definition of plankton production terms, ICES
Marine Science Symposia, 197, 9–19, 1993.
Williams, P. J. L. B., Quay, P. D., Westberry, T. K., and Behrenfeld, M. J.:
The oligotrophic ocean is autotrophic., Annu. Rev. Mar. Sci., 5, 535–49,
https://doi.org/10.1146/annurev-marine-121211-172335, 2013.
Woolf, D. K. and Thorpe, S. A.: Bubbles and the air-sea exchange of gases in
near-saturation conditions, J. Mar. Res., 49, 435–466,
https://doi.org/10.1357/002224091784995765, 1991.
Short summary
We explore the estimation of NCP using an oxygen time series from a surface mooring located in the River Thames plume. Our study site is identified as a region of net heterotrophy with strong seasonal variability. Short-term daily variability in oxygen and horizontal advection is demonstrated to make accurate estimates challenging. The effects of bubble-induced supersaturation is shown to have a large influence on cumulative annual estimates.
We explore the estimation of NCP using an oxygen time series from a surface mooring located in...
Altmetrics
Final-revised paper
Preprint