Articles | Volume 14, issue 11
https://doi.org/10.5194/bg-14-2815-2017
© Author(s) 2017. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
https://doi.org/10.5194/bg-14-2815-2017
© Author(s) 2017. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
Research article
| 
09 Jun 2017
Research article |
| 09 Jun 2017
Increased temperature causes different carbon and nitrogen processing patterns in two common intertidal foraminifera (Ammonia tepida and Haynesina germanica)
Julia Wukovits
CORRESPONDING AUTHOR
University of Vienna, Department of Palaeontology, Vienna, Austria
Annekatrin Julie Enge
University of Vienna, Department of Palaeontology, Vienna, Austria
Wolfgang Wanek
University of Vienna, Department of Microbiology and Ecosystem Science, Terrestrial Ecosystem Research, Vienna, Austria
Margarete Watzka
University of Vienna, Department of Microbiology and Ecosystem Science, Terrestrial Ecosystem Research, Vienna, Austria
Petra Heinz
University of Vienna, Department of Palaeontology, Vienna, Austria
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Joachim Schönfeld, Nicolaas Glock, Irina Polovodova Asteman, Alexandra-Sophie Roy, Marié Warren, Julia Weissenbach, and Julia Wukovits
J. Micropalaeontol., 42, 171–192, https://doi.org/10.5194/jm-42-171-2023, https://doi.org/10.5194/jm-42-171-2023, 2023
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Benthic organisms show aggregated distributions due to the spatial heterogeneity of niches or food. We analysed the distribution of Globobulimina turgida in the Gullmar Fjord, Sweden, with a data–model approach. The population densities did not show any underlying spatial structure but a random log-normal distribution. A temporal data series from the same site depicted two cohorts of samples with high or low densities, which represent hypoxic or well-ventilated conditions in the fjord.
Michael Lintner, Bianca Biedrawa, Julia Wukovits, Wolfgang Wanek, and Petra Heinz
Biogeosciences, 17, 3723–3732, https://doi.org/10.5194/bg-17-3723-2020, https://doi.org/10.5194/bg-17-3723-2020, 2020
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Foraminifera are unicellular marine organisms that play an important role in the marine element cycle. Changes of environmental parameters such as salinity or temperature have a significant impact on the faunal assemblages. Our experiments show that changing salinity in the German Wadden Sea immediately influences the foraminiferal community. It seems that A. tepida is better adapted to salinity fluctuations than H. germanica.
Julia Wukovits, Max Oberrauch, Annekatrin J. Enge, and Petra Heinz
Biogeosciences, 15, 6185–6198, https://doi.org/10.5194/bg-15-6185-2018, https://doi.org/10.5194/bg-15-6185-2018, 2018
Short summary
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Single-celled, benthic foraminifera play a major role in marine biogeochemical cycling. This study compares the organic-matter-derived carbon and nitrogen processing of two abundant intertidal foraminifera species. The results of our laboratory feeding experiments suggest a significant difference in the contributions of each species to coastal carbon and nitrogen fluxes, which is mainly attributed to their different metabolic lifestyles.
Joachim Schönfeld, Nicolaas Glock, Irina Polovodova Asteman, Alexandra-Sophie Roy, Marié Warren, Julia Weissenbach, and Julia Wukovits
J. Micropalaeontol., 42, 171–192, https://doi.org/10.5194/jm-42-171-2023, https://doi.org/10.5194/jm-42-171-2023, 2023
Short summary
Short summary
Benthic organisms show aggregated distributions due to the spatial heterogeneity of niches or food. We analysed the distribution of Globobulimina turgida in the Gullmar Fjord, Sweden, with a data–model approach. The population densities did not show any underlying spatial structure but a random log-normal distribution. A temporal data series from the same site depicted two cohorts of samples with high or low densities, which represent hypoxic or well-ventilated conditions in the fjord.
Lisa Noll, Shasha Zhang, Qing Zheng, Yuntao Hu, Florian Hofhansl, and Wolfgang Wanek
Biogeosciences, 19, 5419–5433, https://doi.org/10.5194/bg-19-5419-2022, https://doi.org/10.5194/bg-19-5419-2022, 2022
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Cleavage of proteins to smaller nitrogen compounds allows microorganisms and plants to exploit the largest nitrogen reservoir in soils and is considered the bottleneck in soil organic nitrogen cycling. Results from soils covering a European transect show that protein turnover is constrained by soil geochemistry, shifts in climate and associated alterations in soil weathering and should be considered as a driver of soil nitrogen availability with repercussions on carbon cycle processes.
Michael Lintner, Bianca Lintner, Wolfgang Wanek, Nina Keul, and Petra Heinz
Biogeosciences, 18, 1395–1406, https://doi.org/10.5194/bg-18-1395-2021, https://doi.org/10.5194/bg-18-1395-2021, 2021
Short summary
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Foraminifera are unicellular marine organisms that play an important role in the marine element cycle. Changes of environmental parameters such as salinity or temperature have a significant impact on the faunal assemblages. Our experiments show that changes in salinity immediately influence the foraminiferal activity. Also the light regime has a significant impact on carbon or nitrogen processing in foraminifera which contain no kleptoplasts.
Michael Lintner, Bianca Biedrawa, Julia Wukovits, Wolfgang Wanek, and Petra Heinz
Biogeosciences, 17, 3723–3732, https://doi.org/10.5194/bg-17-3723-2020, https://doi.org/10.5194/bg-17-3723-2020, 2020
Short summary
Short summary
Foraminifera are unicellular marine organisms that play an important role in the marine element cycle. Changes of environmental parameters such as salinity or temperature have a significant impact on the faunal assemblages. Our experiments show that changing salinity in the German Wadden Sea immediately influences the foraminiferal community. It seems that A. tepida is better adapted to salinity fluctuations than H. germanica.
Nicolás Valiente, Franz Jirsa, Thomas Hein, Wolfgang Wanek, Patricia Bonin, and Juan José Gómez-Alday
Biogeosciences Discuss., https://doi.org/10.5194/bg-2020-20, https://doi.org/10.5194/bg-2020-20, 2020
Preprint withdrawn
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Saline lakes are prone to the accumulation of anthropogenic contaminants, making them highly vulnerable environments to nitrate pollution. We used the revised 15N-isotope pairing technique with sediments from a eutrophic hypersaline lake to unravel the nitrate removal pathways carrying on. Our work shows for the first time the coexistence of denitrification, DNRA and anammox in a highly saline/hypersaline lake, with extraordinarily high rates of coupled DNRA-anammox.
Wolfgang Wanek, David Zezula, Daniel Wasner, Maria Mooshammer, and Judith Prommer
Biogeosciences, 16, 3047–3068, https://doi.org/10.5194/bg-16-3047-2019, https://doi.org/10.5194/bg-16-3047-2019, 2019
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Efforts to understand the global phosphorus (P) cycle are limited by the scarcity of global data on rates of soil P processes, as well as on its environmental controls. Here, we present a novel approach using radiophosphorus labeling of soils, which allows for the measurement of fluxes of abiotic and biotic soil P processes. This approach is also suitable for strongly weathered and P-depleted soils. Biotic processes are corrected for abiotic processes by comparing live and sterile soils.
Julia Wukovits, Max Oberrauch, Annekatrin J. Enge, and Petra Heinz
Biogeosciences, 15, 6185–6198, https://doi.org/10.5194/bg-15-6185-2018, https://doi.org/10.5194/bg-15-6185-2018, 2018
Short summary
Short summary
Single-celled, benthic foraminifera play a major role in marine biogeochemical cycling. This study compares the organic-matter-derived carbon and nitrogen processing of two abundant intertidal foraminifera species. The results of our laboratory feeding experiments suggest a significant difference in the contributions of each species to coastal carbon and nitrogen fluxes, which is mainly attributed to their different metabolic lifestyles.
A. J. Enge, U. Witte, M. Kucera, and P. Heinz
Biogeosciences, 11, 2017–2026, https://doi.org/10.5194/bg-11-2017-2014, https://doi.org/10.5194/bg-11-2017-2014, 2014
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Influence of oxygen minimum zone on macrobenthic community structure in the northern Benguela Upwelling System: a macro-nematode perspective
Simulated terrestrial runoff shifts the metabolic balance of a coastal Mediterranean plankton community towards heterotrophy
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A critical trade-off between nitrogen quota and growth allows Coccolithus braarudii life cycle phases to exploit varying environment
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Viability of coastal fish larvae under ocean alkalinity enhancement: from organisms to communities
Phytoplankton response to increased nickel in the context of ocean alkalinity enhancement
Diversity and density relationships between lebensspuren and tracemaking organisms: a study case from abyssal northwest Pacific
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The study investigates the impact of decreasing oxygen in the ocean on macrofaunal communities using the BUS as an example. It identifies distinct shifts in community composition and feeding guilds across oxygen zones, with nematodes dominating dysoxic areas. These findings underscore the complex responses of benthic organisms to oxygen gradients, crucial for understanding ecosystem dynamics in hypoxic environments and their implications for marine biodiversity and sustainability.
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Due to climate change, it is projected that extreme rainfall events, which bring terrestrial matter into coastal seas, will occur more frequently in the Mediterranean region. To test the effects of runoffs of terrestrial matter on plankton communities from Mediterranean coastal waters, an in situ mesocosm experiment was conducted. The simulated runoff affected key processes mediated by plankton, such as primary production and respiration, suggesting major consequences of such events.
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This study contrasts seabed food webs between a river-fed, high-energy canyon and the nearby slope. We show higher organic carbon (OC) flows through the canyon than the slope. Bacteria dominated the canyon, while seabed fauna contributed more to the slope food web. Due to frequent perturbation, the canyon had a lower faunal stock and OC recycling. Only 4 % of the seabed OC flux enters the canyon food web, suggesting a significant role of the river-fed canyon in transporting OC to the deep sea.
Joost de Vries, Fanny Monteiro, Gerald Langer, Colin Brownlee, and Glen Wheeler
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Calcifying phytoplankton (coccolithophores) utilize a life cycle in which they can grow and divide into two different phases. These two phases (HET and HOL) vary in terms of their physiology and distributions, with many unknowns about what the key differences are. Using a combination of lab experiments and model simulations, we find that nutrient storage is a critical difference between the two phases and that this difference allows them to inhabit different nitrogen input regimes.
Theodor Kindeberg, Karl Michael Attard, Jana Hüller, Julia Müller, Cintia Organo Quintana, and Eduardo Infantes
Biogeosciences, 21, 1685–1705, https://doi.org/10.5194/bg-21-1685-2024, https://doi.org/10.5194/bg-21-1685-2024, 2024
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Seagrass meadows are hotspots for biodiversity and productivity, and planting seagrass is proposed as a tool for mitigating biodiversity loss and climate change. We assessed seagrass planted in different years and found that benthic oxygen and carbon fluxes increased as the seabed developed from bare sediments to a mature seagrass meadow. This increase was partly linked to the diversity of colonizing algae which increased the light-use efficiency of the seagrass meadow community.
Thibauld M. Béjard, Andrés S. Rigual-Hernández, Javier P. Tarruella, José A. Flores, Anna Sanchez Vidal, Irene Llamas Cano, and Francisco J. Sierro
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The Mediterranean Sea is considered a climate change hotspot. Documenting planktic foraminifera population is crucial. In the Sicily Strait, fluxes are higher during winter and positively linked with chlorophyll-a concentration and cool temperatures. A comparison with other Mediterranean sites shows the transitional aspect of the studied zone. Finally, modern populations significantly differ from those in the sediment, highlighting a possible effect of environmental change.
Anna-Selma van der Kaaden, Sandra R. Maier, Siluo Chen, Laurence H. De Clippele, Evert de Froe, Theo Gerkema, Johan van de Koppel, Furu Mienis, Christian Mohn, Max Rietkerk, Karline Soetaert, and Dick van Oevelen
Biogeosciences, 21, 973–992, https://doi.org/10.5194/bg-21-973-2024, https://doi.org/10.5194/bg-21-973-2024, 2024
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Combining hydrodynamic simulations and annotated videos, we separated which hydrodynamic variables that determine reef cover are engineered by cold-water corals and which are not. Around coral mounds, hydrodynamic zones seem to create a typical reef zonation, restricting corals from moving deeper (the expected response to climate warming). But non-engineered downward velocities in winter (e.g. deep winter mixing) seem more important for coral reef growth than coral engineering.
Silvan Urs Goldenberg, Ulf Riebesell, Daniel Brüggemann, Gregor Börner, Michael Sswat, Arild Folkvord, Maria Couret, Synne Spjelkavik, Nicolás Sánchez, Cornelia Jaspers, and Marta Moyano
EGUsphere, https://doi.org/10.5194/egusphere-2024-286, https://doi.org/10.5194/egusphere-2024-286, 2024
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Ocean alkalinity enhancement (OAE) is being evaluated as carbon dioxide removal technology for climate change mitigation. With experiments on single species and species communities, we show that fish larvae can be resilient to the resulting perturbation of seawater. Larvae may hence recruit successfully and continue to support fisheries production in regions of OAE. Our findings for fish and marine food webs help to establish an environmentally safe operating space for this ocean-based solution.
Xiaoke Xin, Giulia Faucher, and Ulf Riebesell
Biogeosciences, 21, 761–772, https://doi.org/10.5194/bg-21-761-2024, https://doi.org/10.5194/bg-21-761-2024, 2024
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Ocean alkalinity enhancement (OAE) is a promising approach to remove CO2 by accelerating natural rock weathering. However, some of the alkaline substances contain trace metals which could be toxic to marine life. By exposing three representative phytoplankton species to Ni released from alkaline materials, we observed varying responses of phytoplankton to nickel concentrations, suggesting caution should be taken and toxic thresholds should be avoided in OAE with Ni-rich materials.
Olmo Miguez-Salas, Angelika Brandt, Henry Knauber, and Torben Riehl
Biogeosciences, 21, 641–655, https://doi.org/10.5194/bg-21-641-2024, https://doi.org/10.5194/bg-21-641-2024, 2024
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In the deep sea, the interaction between benthic fauna (tracemakers) and substrate can be preserved as traces (i.e. lebensspuren), which are common features of seafloor landscapes, rendering them promising proxies for inferring biodiversity from marine images. No general correlation was observed between traces and benthic fauna. However, a local correlation was observed between specific stations depending on unknown tracemakers, tracemaker behaviour, and lebensspuren morphotypes.
Cale A. Miller, Pierre Urrutti, Jean-Pierre Gattuso, Steeve Comeau, Anaïs Lebrun, Samir Alliouane, Robert W. Schlegel, and Frédéric Gazeau
Biogeosciences, 21, 315–333, https://doi.org/10.5194/bg-21-315-2024, https://doi.org/10.5194/bg-21-315-2024, 2024
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This work describes an experimental system that can replicate and manipulate environmental conditions in marine or aquatic systems. Here, we show how the temperature and salinity of seawater delivered from a fjord is manipulated to experimental tanks on land. By constantly monitoring temperature and salinity in each tank via a computer program, the system continuously adjusts automated flow valves to ensure the seawater in each tank matches the targeted experimental conditions.
Rachel A. Kruft Welton, George Hoppit, Daniela N. Schmidt, James D. Witts, and Benjamin C. Moon
Biogeosciences, 21, 223–239, https://doi.org/10.5194/bg-21-223-2024, https://doi.org/10.5194/bg-21-223-2024, 2024
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We conducted a meta-analysis of known experimental literature examining how marine bivalve growth rates respond to climate change. Growth is usually negatively impacted by climate change. Bivalve eggs/larva are generally more vulnerable than either juveniles or adults. Available data on the bivalve response to climate stressors are biased towards early growth stages (commercially important in the Global North), and many families have only single experiments examining climate change impacts.
Vincent Mouchi, Christophe Pecheyran, Fanny Claverie, Cécile Cathalot, Marjolaine Matabos, Yoan Germain, Olivier Rouxel, Didier Jollivet, Thomas Broquet, and Thierry Comtet
Biogeosciences, 21, 145–160, https://doi.org/10.5194/bg-21-145-2024, https://doi.org/10.5194/bg-21-145-2024, 2024
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The impact of deep-sea mining will depend critically on the ability of larval dispersal of hydrothermal mollusks to connect and replenish natural populations. However, assessing connectivity is extremely challenging, especially in the deep sea. Here, we investigate the potential of using the chemical composition of larval shells to discriminate larval origins between multiple hydrothermal sites in the southwest Pacific. Our results confirm that this method can be applied with high accuracy.
Anna-Marie Winter, Nadezda Vasilyeva, and Artem Vladimirov
Biogeosciences, 20, 3683–3716, https://doi.org/10.5194/bg-20-3683-2023, https://doi.org/10.5194/bg-20-3683-2023, 2023
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There is an increasing number of fish in poor state, and many do not recover, even when fishing pressure is ceased. An Allee effect can hinder population recovery because it suppresses the fish's productivity at low abundance. With a model fitted to 17 Atlantic cod stocks, we find that ocean warming and fishing can cause an Allee effect. If present, the Allee effect hinders fish recovery. This shows that Allee effects are dynamic, not uncommon, and calls for precautionary management measures.
Afrah Alothman, Daffne López-Sandoval, Carlos M. Duarte, and Susana Agustí
Biogeosciences, 20, 3613–3624, https://doi.org/10.5194/bg-20-3613-2023, https://doi.org/10.5194/bg-20-3613-2023, 2023
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This study investigates bacterial dissolved inorganic carbon (DIC) fixation in the Red Sea, an oligotrophic ecosystem, using stable-isotope labeling and spectroscopy. The research reveals that bacterial DIC fixation significantly contributes to total DIC fixation, in the surface and deep water. The study demonstrates that as primary production decreases, the role of bacterial DIC fixation increases, emphasizing its importance with photosynthesis in estimating oceanic carbon dioxide production.
Arianna Zampollo, Thomas Cornulier, Rory O'Hara Murray, Jacqueline Fiona Tweddle, James Dunning, and Beth E. Scott
Biogeosciences, 20, 3593–3611, https://doi.org/10.5194/bg-20-3593-2023, https://doi.org/10.5194/bg-20-3593-2023, 2023
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This paper highlights the use of the bottom mixed layer depth (BMLD: depth between the end of the pycnocline and the mixed layer below) to investigate subsurface Chlorophyll a (a proxy of primary production) in temperate stratified shelf waters. The strict correlation between subsurface Chl a and BMLD becomes relevant in shelf-productive waters where multiple stressors (e.g. offshore infrastructure) will change the stratification--mixing balance and related carbon fluxes.
Marco Fusi, Sylvain Rigaud, Giovanna Guadagnin, Alberto Barausse, Ramona Marasco, Daniele Daffonchio, Julie Régis, Louison Huchet, Capucine Camin, Laura Pettit, Cristina Vina-Herbon, and Folco Giomi
Biogeosciences, 20, 3509–3521, https://doi.org/10.5194/bg-20-3509-2023, https://doi.org/10.5194/bg-20-3509-2023, 2023
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Oxygen availability in marine water and freshwater is very variable at daily and seasonal scales. The dynamic nature of oxygen fluctuations has important consequences for animal and microbe physiology and ecology, yet it is not fully understood. In this paper, we showed the heterogeneous nature of the aquatic oxygen landscape, which we defined here as the
oxyscape, and we addressed the importance of considering the oxyscape in the modelling and managing of aquatic ecosystems.
Anne L. Morée, Tayler M. Clarke, William W. L. Cheung, and Thomas L. Frölicher
Biogeosciences, 20, 2425–2454, https://doi.org/10.5194/bg-20-2425-2023, https://doi.org/10.5194/bg-20-2425-2023, 2023
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Ocean temperature and oxygen shape marine habitats together with species’ characteristics. We calculated the impacts of projected 21st-century warming and oxygen loss on the contemporary habitat volume of 47 marine species and described the drivers of these impacts. Most species lose less than 5 % of their habitat at 2 °C of global warming, but some species incur losses 2–3 times greater than that. We also calculate which species may be most vulnerable to climate change and why this is the case.
Markus A. Min, David M. Needham, Sebastian Sudek, Nathan Kobun Truelove, Kathleen J. Pitz, Gabriela M. Chavez, Camille Poirier, Bente Gardeler, Elisabeth von der Esch, Andrea Ludwig, Ulf Riebesell, Alexandra Z. Worden, and Francisco P. Chavez
Biogeosciences, 20, 1277–1298, https://doi.org/10.5194/bg-20-1277-2023, https://doi.org/10.5194/bg-20-1277-2023, 2023
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Emerging molecular methods provide new ways of understanding how marine communities respond to changes in ocean conditions. Here, environmental DNA was used to track the temporal evolution of biological communities in the Peruvian coastal upwelling system and in an adjacent enclosure where upwelling was simulated. We found that the two communities quickly diverged, with the open ocean being one found during upwelling and the enclosure evolving to one found under stratified conditions.
Wojciech Majewski, Witold Szczuciński, and Andrew J. Gooday
Biogeosciences, 20, 523–544, https://doi.org/10.5194/bg-20-523-2023, https://doi.org/10.5194/bg-20-523-2023, 2023
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We studied foraminifera living in the fjords of South Georgia, a sub-Antarctic island sensitive to climate change. As conditions in water and on the seafloor vary, different associations of these microorganisms dominate far inside, in the middle, and near fjord openings. Assemblages in inner and middle parts of fjords are specific to South Georgia, but they may become widespread with anticipated warming. These results are important for interpretating fossil records and monitoring future change.
Allanah Joy Paul, Lennart Thomas Bach, Javier Arístegui, Elisabeth von der Esch, Nauzet Hernández-Hernández, Jonna Piiparinen, Laura Ramajo, Kristian Spilling, and Ulf Riebesell
Biogeosciences, 19, 5911–5926, https://doi.org/10.5194/bg-19-5911-2022, https://doi.org/10.5194/bg-19-5911-2022, 2022
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We investigated how different deep water chemistry and biology modulate the response of surface phytoplankton communities to upwelling in the Peruvian coastal zone. Our results show that the most influential drivers were the ratio of inorganic nutrients (N : P) and the microbial community present in upwelling source water. These led to unexpected and variable development in the phytoplankton assemblage that could not be predicted by the amount of inorganic nutrients alone.
Hanna M. Kauko, Philipp Assmy, Ilka Peeken, Magdalena Różańska-Pluta, Józef M. Wiktor, Gunnar Bratbak, Asmita Singh, Thomas J. Ryan-Keogh, and Sebastien Moreau
Biogeosciences, 19, 5449–5482, https://doi.org/10.5194/bg-19-5449-2022, https://doi.org/10.5194/bg-19-5449-2022, 2022
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This article studies phytoplankton (microscopic
plantsin the ocean capable of photosynthesis) in Kong Håkon VII Hav in the Southern Ocean. Different species play different roles in the ecosystem, and it is therefore important to assess the species composition. We observed that phytoplankton blooms in this area are formed by large diatoms with strong silica armors, which can lead to high silica (and sometimes carbon) export to depth and be important prey for krill.
Chloe Carbonne, Steeve Comeau, Phoebe T. W. Chan, Keyla Plichon, Jean-Pierre Gattuso, and Núria Teixidó
Biogeosciences, 19, 4767–4777, https://doi.org/10.5194/bg-19-4767-2022, https://doi.org/10.5194/bg-19-4767-2022, 2022
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For the first time, our study highlights the synergistic effects of a 9-month warming and acidification combined stress on the early life stages of a Mediterranean azooxanthellate coral, Astroides calycularis. Our results predict a decrease in dispersion, settlement, post-settlement linear extention, budding and survival under future global change and that larvae and recruits of A. calycularis are stages of interest for this Mediterranean coral resistance, resilience and conservation.
Iris E. Hendriks, Anna Escolano-Moltó, Susana Flecha, Raquel Vaquer-Sunyer, Marlene Wesselmann, and Núria Marbà
Biogeosciences, 19, 4619–4637, https://doi.org/10.5194/bg-19-4619-2022, https://doi.org/10.5194/bg-19-4619-2022, 2022
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Seagrasses are marine plants with the capacity to act as carbon sinks due to their high primary productivity, using carbon for growth. This capacity can play a key role in climate change mitigation. We compiled and published data showing that two Mediterranean seagrass species have different metabolic rates, while the study method influences the rates of the measurements. Most communities act as carbon sinks, while the western basin might be more productive than the eastern Mediterranean.
Raúl Tapia, Sze Ling Ho, Hui-Yu Wang, Jeroen Groeneveld, and Mahyar Mohtadi
Biogeosciences, 19, 3185–3208, https://doi.org/10.5194/bg-19-3185-2022, https://doi.org/10.5194/bg-19-3185-2022, 2022
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We report census counts of planktic foraminifera in depth-stratified plankton net samples off Indonesia. Our results show that the vertical distribution of foraminifera species routinely used in paleoceanographic reconstructions varies in hydrographically distinct regions, likely in response to food availability. Consequently, the thermal gradient based on mixed layer and thermocline dwellers also differs for these regions, suggesting potential implications for paleoceanographic reconstructions.
Ricardo González-Gil, Neil S. Banas, Eileen Bresnan, and Michael R. Heath
Biogeosciences, 19, 2417–2426, https://doi.org/10.5194/bg-19-2417-2022, https://doi.org/10.5194/bg-19-2417-2022, 2022
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In oceanic waters, the accumulation of phytoplankton biomass in winter, when light still limits growth, is attributed to a decrease in grazing as the mixed layer deepens. However, in coastal areas, it is not clear whether winter biomass can accumulate without this deepening. Using 21 years of weekly data, we found that in the Scottish coastal North Sea, the seasonal increase in light availability triggers the accumulation of phytoplankton biomass in winter, when light limitation is strongest.
Birgit Koehler, Mårten Erlandsson, Martin Karlsson, and Lena Bergström
Biogeosciences, 19, 2295–2312, https://doi.org/10.5194/bg-19-2295-2022, https://doi.org/10.5194/bg-19-2295-2022, 2022
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Understanding species richness patterns remains a challenge for biodiversity management. We estimated fish species richness over a coastal salinity gradient (3–32) with a method that allowed comparing data from various sources. Species richness was 3-fold higher at high vs. low salinity, and salinity influenced species’ habitat preference, mobility and feeding type. If climate change causes upper-layer freshening of the Baltic Sea, further shifts along the identified patterns may be expected.
Uri Obolski, Thomas Wichard, Alvaro Israel, Alexander Golberg, and Alexander Liberzon
Biogeosciences, 19, 2263–2271, https://doi.org/10.5194/bg-19-2263-2022, https://doi.org/10.5194/bg-19-2263-2022, 2022
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The algal genus Ulva plays a major role in coastal ecosystems worldwide and is a promising prospect as an seagriculture crop. A substantial hindrance to cultivating Ulva arises from sudden sporulation, leading to biomass loss. This process is not yet well understood. Here, we characterize the dynamics of Ulva growth, considering the potential impact of sporulation inhibitors, using a mathematical model. Our findings are an essential step towards understanding the dynamics of Ulva growth.
Emanuela Fanelli, Samuele Menicucci, Sara Malavolti, Andrea De Felice, and Iole Leonori
Biogeosciences, 19, 1833–1851, https://doi.org/10.5194/bg-19-1833-2022, https://doi.org/10.5194/bg-19-1833-2022, 2022
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Zooplankton play a key role in marine ecosystems, forming the base of the marine food web and a link between primary producers and higher-order consumers, such as fish. This aspect is crucial in the Adriatic basin, one of the most productive and overexploited areas of the Mediterranean Sea. A better understanding of community and food web structure and their response to water mass changes is essential under a global warming scenario, as zooplankton are sensitive to climate change.
Masaya Yoshikai, Takashi Nakamura, Rempei Suwa, Sahadev Sharma, Rene Rollon, Jun Yasuoka, Ryohei Egawa, and Kazuo Nadaoka
Biogeosciences, 19, 1813–1832, https://doi.org/10.5194/bg-19-1813-2022, https://doi.org/10.5194/bg-19-1813-2022, 2022
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This study presents a new individual-based vegetation model to investigate salinity control on mangrove productivity. The model incorporates plant hydraulics and tree competition and predicts unique and complex patterns of mangrove forest structures that vary across soil salinity gradients. The presented model does not hold an empirical expression of salinity influence on productivity and thus may provide a better understanding of mangrove forest dynamics in future climate change.
Coulson A. Lantz, William Leggat, Jessica L. Bergman, Alexander Fordyce, Charlotte Page, Thomas Mesaglio, and Tracy D. Ainsworth
Biogeosciences, 19, 891–906, https://doi.org/10.5194/bg-19-891-2022, https://doi.org/10.5194/bg-19-891-2022, 2022
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Coral bleaching events continue to drive the degradation of coral reefs worldwide. In this study we measured rates of daytime coral reef community calcification and photosynthesis during a reef-wide bleaching event. Despite a measured decline in coral health across several taxa, there was no change in overall daytime community calcification and photosynthesis. These findings highlight potential limitations of these community-level metrics to reflect actual changes in coral health.
Hyewon Heather Kim, Jeff S. Bowman, Ya-Wei Luo, Hugh W. Ducklow, Oscar M. Schofield, Deborah K. Steinberg, and Scott C. Doney
Biogeosciences, 19, 117–136, https://doi.org/10.5194/bg-19-117-2022, https://doi.org/10.5194/bg-19-117-2022, 2022
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Heterotrophic marine bacteria are tiny organisms responsible for taking up organic matter in the ocean. Using a modeling approach, this study shows that characteristics (taxonomy and physiology) of bacteria are associated with a subset of ecological processes in the coastal West Antarctic Peninsula region, a system susceptible to global climate change. This study also suggests that bacteria will become more active, in particular large-sized cells, in response to changing climates in the region.
Alice E. Webb, Didier M. de Bakker, Karline Soetaert, Tamara da Costa, Steven M. A. C. van Heuven, Fleur C. van Duyl, Gert-Jan Reichart, and Lennart J. de Nooijer
Biogeosciences, 18, 6501–6516, https://doi.org/10.5194/bg-18-6501-2021, https://doi.org/10.5194/bg-18-6501-2021, 2021
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The biogeochemical behaviour of shallow reef communities is quantified to better understand the impact of habitat degradation and species composition shifts on reef functioning. The reef communities investigated barely support reef functions that are usually ascribed to conventional coral reefs, and the overall biogeochemical behaviour is found to be similar regardless of substrate type. This suggests a decrease in functional diversity which may therefore limit services provided by this reef.
Emmanuel Devred, Andrea Hilborn, and Cornelia Elizabeth den Heyer
Biogeosciences, 18, 6115–6132, https://doi.org/10.5194/bg-18-6115-2021, https://doi.org/10.5194/bg-18-6115-2021, 2021
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A theoretical model of grey seal seasonal abundance on Sable Island (SI) coupled with chlorophyll-a concentration [chl-a] measured by satellite revealed the impact of seal nitrogen fertilization on the surrounding waters of SI, Canada. The increase in seals from about 100 000 in 2003 to about 360 000 in 2018 during the breeding season is consistent with an increase in [chl-a] leeward of SI. The increase in seal abundance explains 8 % of the [chl-a] increase.
Julie Meilland, Michael Siccha, Maike Kaffenberger, Jelle Bijma, and Michal Kucera
Biogeosciences, 18, 5789–5809, https://doi.org/10.5194/bg-18-5789-2021, https://doi.org/10.5194/bg-18-5789-2021, 2021
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Planktonic foraminifera population dynamics has long been assumed to be controlled by synchronous reproduction and ontogenetic vertical migration (OVM). Due to contradictory observations, this concept became controversial. We here test it in the Atlantic ocean for four species of foraminifera representing the main clades. Our observations support the existence of synchronised reproduction and OVM but show that more than half of the population does not follow the canonical trajectory.
Federica Maggioni, Mireille Pujo-Pay, Jérome Aucan, Carlo Cerrano, Barbara Calcinai, Claude Payri, Francesca Benzoni, Yves Letourneur, and Riccardo Rodolfo-Metalpa
Biogeosciences, 18, 5117–5140, https://doi.org/10.5194/bg-18-5117-2021, https://doi.org/10.5194/bg-18-5117-2021, 2021
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Based on current experimental evidence, climate change will affect up to 90 % of coral reefs worldwide. The originality of this study arises from our recent discovery of an exceptional study site where environmental conditions (temperature, pH, and oxygen) are even worse than those forecasted for the future.
While these conditions are generally recognized as unfavorable for marine life, we found a rich and abundant coral reef thriving under such extreme environmental conditions.
Nisan Sariaslan and Martin R. Langer
Biogeosciences, 18, 4073–4090, https://doi.org/10.5194/bg-18-4073-2021, https://doi.org/10.5194/bg-18-4073-2021, 2021
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Analyses of foraminiferal assemblages from the Mamanguape mangrove estuary (northern Brazil) revealed highly diverse, species-rich, and structurally complex biotas. The atypical fauna resembles shallow-water offshore assemblages and are interpreted to be the result of highly saline ocean waters penetrating deep into the estuary. The findings contrast with previous studies, have implications for the fossil record, and provide novel perspectives for reconstructing mangrove environments.
Jutta E. Wollenburg, Jelle Bijma, Charlotte Cremer, Ulf Bickmeyer, and Zora Mila Colomba Zittier
Biogeosciences, 18, 3903–3915, https://doi.org/10.5194/bg-18-3903-2021, https://doi.org/10.5194/bg-18-3903-2021, 2021
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Cultured at in situ high-pressure conditions Cibicides and Cibicidoides taxa develop lasting ectoplasmic structures that cannot be retracted or resorbed. An ectoplasmic envelope surrounds their test and may protect the shell, e.g. versus carbonate aggressive bottom water conditions. Ectoplasmic roots likely anchor the specimens in areas of strong bottom water currents, trees enable them to elevate themselves above ground, and twigs stabilize and guide the retractable pseudopodial network.
Kumar Nimit
Biogeosciences, 18, 3631–3635, https://doi.org/10.5194/bg-18-3631-2021, https://doi.org/10.5194/bg-18-3631-2021, 2021
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The Indian Ocean Rim hosts many of the underdeveloped and emerging economies that depend on ocean resources for the livelihood of millions. Operational ocean information services cater to the requirements of resource managers and end-users to efficiently harness resources, mitigate threats and ensure safety. This paper outlines existing tools and explores the ongoing research that has the potential to convert the findings into operational services in the near- to midterm.
Finn Mielck, Rune Michaelis, H. Christian Hass, Sarah Hertel, Caroline Ganal, and Werner Armonies
Biogeosciences, 18, 3565–3577, https://doi.org/10.5194/bg-18-3565-2021, https://doi.org/10.5194/bg-18-3565-2021, 2021
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Marine sand mining is becoming more and more important to nourish fragile coastlines that face global change. We investigated the largest sand extraction site in the German Bight. The study reveals that after more than 35 years of mining, the excavation pits are still detectable on the seafloor while the sediment composition has largely changed. The organic communities living in and on the seafloor were strongly decimated, and no recovery is observable towards previous conditions.
France Van Wambeke, Elvira Pulido, Philippe Catala, Julie Dinasquet, Kahina Djaoudi, Anja Engel, Marc Garel, Sophie Guasco, Barbara Marie, Sandra Nunige, Vincent Taillandier, Birthe Zäncker, and Christian Tamburini
Biogeosciences, 18, 2301–2323, https://doi.org/10.5194/bg-18-2301-2021, https://doi.org/10.5194/bg-18-2301-2021, 2021
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Michaelis–Menten kinetics were determined for alkaline phosphatase, aminopeptidase and β-glucosidase in the Mediterranean Sea. Although the ectoenzymatic-hydrolysis contribution to heterotrophic prokaryotic needs was high in terms of N, it was low in terms of C. This study points out the biases in interpretation of the relative differences in activities among the three tested enzymes in regard to the choice of added concentrations of fluorogenic substrates.
Oscar E. Romero, Simon Ramondenc, and Gerhard Fischer
Biogeosciences, 18, 1873–1891, https://doi.org/10.5194/bg-18-1873-2021, https://doi.org/10.5194/bg-18-1873-2021, 2021
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Upwelling intensity along NW Africa varies on the interannual to decadal timescale. Understanding its changes is key for the prediction of future changes of CO2 sequestration in the northeastern Atlantic. Based on a multiyear (1988–2009) sediment trap experiment at the site CBmeso, fluxes and the species composition of the diatom assemblage are presented. Our data help in establishing the scientific basis for forecasting and modeling future states of this ecosystem and its decadal changes.
Katharine T. Bigham, Ashley A. Rowden, Daniel Leduc, and David A. Bowden
Biogeosciences, 18, 1893–1908, https://doi.org/10.5194/bg-18-1893-2021, https://doi.org/10.5194/bg-18-1893-2021, 2021
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Turbidity flows – underwater avalanches – are large-scale physical disturbances believed to have profound impacts on productivity and diversity of benthic communities in the deep sea. We reviewed published studies and found that current evidence for changes in productivity is ambiguous at best, but the influence on regional and local diversity is clearer. We suggest study design criteria that may lead to a better understanding of large-scale disturbance effects on deep-sea benthos.
Phillip Williamson, Hans-Otto Pörtner, Steve Widdicombe, and Jean-Pierre Gattuso
Biogeosciences, 18, 1787–1792, https://doi.org/10.5194/bg-18-1787-2021, https://doi.org/10.5194/bg-18-1787-2021, 2021
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The reliability of ocean acidification research was challenged in early 2020 when a high-profile paper failed to corroborate previously observed impacts of high CO2 on the behaviour of coral reef fish. We now know the reason why: the
replicatedstudies differed in many ways. Open-minded and collaborative assessment of all research results, both negative and positive, remains the best way to develop process-based understanding of the impacts of ocean acidification on marine organisms.
Michael Lintner, Bianca Lintner, Wolfgang Wanek, Nina Keul, and Petra Heinz
Biogeosciences, 18, 1395–1406, https://doi.org/10.5194/bg-18-1395-2021, https://doi.org/10.5194/bg-18-1395-2021, 2021
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Foraminifera are unicellular marine organisms that play an important role in the marine element cycle. Changes of environmental parameters such as salinity or temperature have a significant impact on the faunal assemblages. Our experiments show that changes in salinity immediately influence the foraminiferal activity. Also the light regime has a significant impact on carbon or nitrogen processing in foraminifera which contain no kleptoplasts.
Michele Casini, Martin Hansson, Alessandro Orio, and Karin Limburg
Biogeosciences, 18, 1321–1331, https://doi.org/10.5194/bg-18-1321-2021, https://doi.org/10.5194/bg-18-1321-2021, 2021
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In the past 20 years the condition of the eastern Baltic cod has dropped, with large implications for the fishery. Our results show that simultaneously the cod population has moved deeper while low-oxygenated waters detrimental for cod growth have become shallower. Cod have thus dwelled more in detrimental waters, explaining the drop in its condition. This study, using long-term fish and hydrological monitoring data, evidences the impact of deoxygenation on fish biology and fishing.
Elizabeth D. LaBone, Kenneth A. Rose, Dubravko Justic, Haosheng Huang, and Lixia Wang
Biogeosciences, 18, 487–507, https://doi.org/10.5194/bg-18-487-2021, https://doi.org/10.5194/bg-18-487-2021, 2021
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The hypoxic zone is an area of low dissolved oxygen (DO) in the Gulf of Mexico. Fish can be killed by exposure to hypoxia and can be negatively impacted by exposure to low, nonlethal DO concentrations (sublethal DO). We found that high sublethal area resulted in higher exposure and DO variability had a small effect on exposure. There was a large variation in exposure among individuals, which when combined with spatial variability of DO, can result in an underestimation of exposure when averaged.
Svenja Reents, Peter Mueller, Hao Tang, Kai Jensen, and Stefanie Nolte
Biogeosciences, 18, 403–411, https://doi.org/10.5194/bg-18-403-2021, https://doi.org/10.5194/bg-18-403-2021, 2021
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By conducting a flooding experiment with two genotypes of the salt-marsh grass Elymus athericus, we show considerable differences in biomass response to flooding within the same species. As biomass production plays a major role in sedimentation processes and thereby salt-marsh accretion, we emphasise the importance of taking intraspecific differences into account when evaluating ecosystem resilience to accelerated sea level rise.
Cited articles
Al-Raei, A. M., Bosselmann, K., Böttcher, M. E., Hespenheide, B., and Tauber, F.: Seasonal dynamics of microbial sulfate reduction in temperate intertidal surface sediments: controls by temperature and organic matter, Ocean Dynam., 59, 351–370, 2009.
Allen, A., Gillooly, J., and Brown, J.: Linking the global carbon cycle to individual metabolism, Funct. Ecol., 19, 202–213, 2005.
Alve, E. and Murray, J.: Ecology and taphonomy of benthic foraminifera in a temperate mesotidal inlet, J. Foramin. Res., 24, 18–27, 1994.
Alve, E. and Murray, J. W.: Temporal variability in vertical distributions of live (stained) intertidal foraminifera, southern England, J. Foramin. Res., 31, 12–24, 2001.
Austin, H. A., Austin, W. E., and Paterson, D. M.: Extracellular cracking and content removal of the benthic diatom Pleurosigma angulatum (Quekett) by the benthic foraminifera Haynesina germanica (Ehrenberg), Mar. Micropaleontol., 57, 68–73, 2005.
Bowser, S. S., Alexander, S. P., Stockton, W. L., and Delaca, T. E.: Extracellular matrix augments mechanical properties of pseudopodia in the carnivorous foraminiferan Astrammina rara: role in prey capture, J. Protozool., 39, 724–732, 1992.
Bradshaw, J. S.: Preliminary laboratory experiments on ecology of foraminiferal populations, Micropaleontology, 1, 351–358, 1955.
Bradshaw, J. S.: Laboratory Studies on the Rate of Growth of the Foraminifer, Streblus beccarii (Linné) var. tepida (Cushman), J. Paleontol., 39, 1138–1147, 1957.
Bradshaw, J. S.: Laboratory experiments on the ecology of foraminifera, Contributions from the Cushman Foundation for foraminiferal research, 7, 87–106, 1961.
Brown, J. H., Gillooly, J. F., Allen, A. P., Savage, V. M., and West, G. B.: Toward a metabolic theory of ecology, Ecology, 85, 1771–1789, 2004.
Buhring, S., Lampadariou, N., Moodley, L., Tselepides, A., and Witte, U.: Benthic microbial and whole-community responses to different amounts of 1 3C-enriched algae: In situ experiments in the deep Cretan Sea (Eastern Mediterranean), Limnol. Oceanogr., 51, 157–165, https://doi.org/10.4319/lo.2006.51.1.0157, 2006.
Buzas, M. A.: Foraminifera as prey for benthic deposit feeders: results of predator exclusion experiments, J. Mar. Res., 36, 617–625, 1978.
Buzas, M. A. and Carle, K. J.: Predators of foraminifera in the Indian River, Florida, J. Foramin. Res., 9, 336–340, 1979.
Carr, L. A. and Bruno, J. F.: Warming increases the top-down effects and metabolism of a subtidal herbivore, PeerJ, 1, e109, https://doi.org/10.7717/peerj.109, 2013.
Cesbron, F., Geslin, E., Jorissen, F., Delgard, M., Charrieau, L., Deflandre, B., Jézéquel, D., Anschutz, P., and Metzger, E.: Vertical distribution and respiration rates of benthic foraminifera: Contribution to aerobic remineralization in intertidal mudflats covered by Zostera noltei meadows, Estuar. Coast. Shelf S., 179, 23–28, https://doi.org/10.1016/j.ecss.2015.12.005, 2016.
Cevasco, M. E., Lechliter, S. M., Mosier, A. E., and Perez, J.: Initial Observations of Kleptoplasty in the Foraminifera of Coastal South Carolina, Southeast. Nat., 14, 361–372, 2015.
Conover, W. J., Johnson, M. E., and Johnson, M. M.: A comparative study of tests for homogeneity of variances, with applications to the outer continental shelf bidding data, Technometrics, 23, 351–361, 1981.
Cook, P. L. M., Revill, A. T., Clementson, L. A., and Volkman, J. K.: Carbon and nitrogen cycling on intertidal mudflats of a temperate Australian estuary. III. Sources of organic matter, Mar. Ecol.-Prog. Ser., 280, 55–72, https://doi.org/10.3354/meps280055, 2004.
Cross, W. F., Benstead, J. P., Frost, P. C., and Thomas, S. A.: Ecological stoichiometry in freshwater benthic systems: recent progress and perspectives, Freshwater Biol., 50, 1895–1912, 2005.
Culver, S. and Buzas, M.: The effects of anthropogenic habitat disturbance, habitat destruction, and global warming on shallow marine benthic foraminifera, The Journal of Foraminiferal Research, 25, 204–211, 1995.
de Nooijer, L. J.: Shallow water benthic foraminifera as proxy for natural versus human-induced environmental change, vol. 272, Utrecht University, 2007.
Debenay, J.-P., Bicchi, E., Goubert, E., and du Châtelet, E. A.: Spatio-temporal distribution of benthic foraminifera in relation to estuarine dynamics (Vie estuary, Vendée, W France), Estuar. Coast. Shelf S., 67, 181–197, 2006.
Dickson, A. G. and Goyet, C.: Handbook of methods for the analysis of the various parameters of the carbon dioxide system in sea water, publisher not identified, 1994.
Diz, P. and Francés, G.: Distribution of live benthic foraminifera in the Ría de Vigo (NW Spain), Marine Micropaleontology, 66, 165–191, 2008.
Diz, P., Barras, C., Geslin, E., Reichart, G.-J., Metzger, E., Jorissen, F., and Bijma, J.: Incorporation of Mg and Sr and oxygen and carbon stable isotope fractionation in cultured Ammonia tepida, Mar. Micropaleontol., 92, 16–28, 2012.
du Chatelet, E. A., Degre, D., Sauriau, P.-G., and Debenay, J.-P.: Distribution of living benthic foraminifera in relation with environmental variables within the Aiguillon cove (Atlantic coast, France): improving knowledge for paleoecological interpretation, Bulletin de la Société Géologique de France, 180, 131–144, 2009.
Enge, A. J., Witte, U., Kucera, M., and Heinz, P.: Uptake of phytodetritus by benthic foraminifera under oxygen depletion at the Indian margin (Arabian Sea), Biogeosciences, 11, 2017–2026, https://doi.org/10.5194/bg-11-2017-2014, 2014.
Enge, A. J., Nomaki, H., Ogawa, N. O., Witte, U., Moeseneder, M. M., Lavik, G., Ohkouchi, N., Kitazato, H., Kučera, M., and Heinz, P.: Response of the benthic foraminiferal community to a simulated short-term phytodetritus pulse in the abyssal North Pacific, Mar. Ecol.-Prog. Ser., 438, 129–142, 2011.
Enge, A. J., Wukovits, J., Wanek, W., Watzka, M., Witte, U. F., Hunter, W. R., and Heinz, P.: Carbon and nitrogen uptake of calcareous benthic foraminifera along a depth-related oxygen gradient in the OMZ of the Arabian Sea, Front. Microbiol., 7, https://doi.org/10.3389/fmicb.2016.00071, 2016.
Evrard, V., Soetaert, K., Heip, C. H., Huettel, M., Xenopoulos, M. A., and Middelburg, J. J.: Carbon and nitrogen flows through the benthic food web of a photic subtidal sandy sediment, Mar. Ecol.-Prog. Ser., 416, 1–16, 2010.
Ferreira, V., Goncalves, A. L., Godbold, D. L., and Canhoto, C.: Effect of increased atmospheric CO2 on the performance of an aquatic detritivore through changes in water temperature and litter quality, Glob. Change Biol., 16, 3284–3296, 2010.
Florent Baty, Christian Ritz, Sandrine Charles, Martin Brutsche, Jean-Pierre Flandrois, and Marie-Laure Delignette-Muller: A Toolbox for Nonlinear Regression in R: The Package nlstools, J. Stat. Softw., 66, 1–21, 2015.
Frost, P. C., Evans-White, M. A., Finkel, Z. V., Jensen, T. C., and Matzek, V.: Are you what you eat? Physiological constraints on organismal stoichiometry in an elementally imbalanced world, Oikos, 109, 18–28, 2005.
Gihring, T. M., Humphrys, M., Mills, H. J., Huette, M., and Kostka, J. E.: Identification of phytodetritus-degrading microbial communities in sublittoral Gulf of Mexico sands, Limnol. Oceanogr., 54, 1073–1083, 2009.
Goineau, A., Fontanier, C., Jorissen, F., Buscail, R., Kerhervé, P., Cathalot, C., Pruski, A. M., Lantoine, F., Bourgeois, S., Metzger, E., Legrand, E., and Rabouille, C.: Temporal variability of live (stained) benthic foraminiferal faunas in a river-dominated shelf – Faunal response to rapid changes of the river influence (Rhône prodelta, NW Mediterranean), Biogeosciences, 9, 1367–1388, https://doi.org/10.5194/bg-9-1367-2012, 2012.
Goldstein, S. T. and Alve, E.: Experimental assembly of foraminiferal communities from coastal propagule banks, Mar. Ecol.-Prog. Ser., 437, 1–11, 2011.
Goldstein, S. T. and Corliss, B. H.: Deposit feeding in selected deep-sea and shallow-water benthic foraminifera, Deep Sea Res. Pt. I, 41, 229–241, 1994.
Guillard, R. R.: Culture of phytoplankton for feeding marine invertebrates, in: Culture of marine invertebrate animals, Springer, 29–60, 1975.
Guillard, R. R. and Ryther, J. H.: Studies of marine planktonic diatoms: I. Cyclotella Nana Hustedt, and Detonula Confervacea (CLEVE) Gran, Can. J. Microbiol., 8, 229–239, 1962.
Haynert, K. and Schönfeld, J.: Impact of changing carbonate chemistry, temperature, and salinity on growth and test degradation of the benthic foraminifer Ammonia aomoriensis, J. Foramin. Res., 44, 76–89, 2014.
Hayward, B. W., Grenfell, H., Cairns, G., and Smith, A.: Environmental controls on benthic foraminiferal and thecamoebian associations in a New Zealand tidal inlet, J. Foramin. Res., 26, 150–171, 1996.
Heinz, P., Hemleben, C., and Kitazato, H.: Time-response of cultured deep-sea benthic foraminifera to different algal diets, Deep Sea Res. Pt. I, 49, 517–537, 2002.
Heinz, P., Marten, R. A., Linshy, V. N., Haap, T., Geslin, E., and Köhler, H.-R.: 70 kD stress protein (Hsp70) analysis in living shallow-water benthic foraminifera, Mar. Biol. Res., 8, 677–681, 2012.
Heip, C., Goosen, N., Herman, P., Kromkamp, J., Middelburg, J., and Soetaert, K.: Production and consumption of biological particles in temperate tidal estuaries, Oceanography and Marine Biology: an annual review, 33, 1–149, 1995.
Hohenegger, J., Piller, W., and Baal, C.: Reasons for spatial microdistributions of foraminifers in an intertidal pool (northern Adriatic Sea), Mar. Ecol., 10, 43–78, 1989.
Hoppe, H.-G., Breithaupt, P., Walther, K., Koppe, R., Bleck, S., Sommer, U., and Jürgens, K.: Climate warming in winter affects the coupling between phytoplankton and bacteria during the spring bloom: a mesocosm study, Aquat. Microb. Ecol., 51, 105–115, 2008.
Hunter, W. R., Levin, L. A., Kitazato, H., and Witte, U.: Macrobenthic assemblage structure and organismal stoichiometry control faunal processing of particulate organic carbon and nitrogen in oxygen minimum zone sediments, Biogeosciences, 9, 993–1006, https://doi.org/10.5194/bg-9-993-2012, 2012.
Jeffreys, R. M., Burke, C., Jamieson, A. J., Narayanaswamy, B. E., Ruhl, H. A., Smith Jr, K. L., and Witte, U.: Feeding preferences of abyssal macrofauna inferred from in situ pulse chase experiments, PloS one, 8, e80510, https://doi.org/10.1371/journal.pone.0080510, 2013.
Joye, S. B., De Beer, D., and Cook, P. L. M.: Biogeochemical dynamics of coastal tidal flats, in: Coastal wetlands: an ecosystem integrated approach, edited by: Perillo, G. M. E., Wolanski, E., Cahoon, D. R., and Brinson, M. M., Elsevier, 345–374, 2009.
Kester, D. R., Duedall, I. W., Connors, D. N., and Pytkowicz, R. M.: Preparation of artificial seawater, Limnol. Oceanogr., 12, 176–179, 1967.
Knight, R. and Mantoura, R. F. C.: Chlorophyll and carotenoid pigments in Foraminifera and their symbiotic algae: analysis by high performance liquid chromatography, Mar. Ecol.-Prog. Ser., 23, 241–249, 1985.
Kroopnick, P., Weiss, R., and Craig, H.: Total CO2, 13C, and dissolved oxygen-18O at Geosecs II in the North Atlantic, Earth Planet. Sci. Lett., 16, 103–110, 1972.
Lee, J. J. and Muller, W. A.: Trophic dynamics and niches of salt marsh foraminifera, Am. Zool., 13, 215–223, https://doi.org/10.1093/icb/13.1.215, 1973.
Lee, J. J., McEnery, M., Pierce, S., Freudenthal, H., and Muller, W.: Tracer experiments in feeding littoral foraminifera, J. Protozool., 13, 659–670, 1966.
Lei, Y.-L., Stumm, K., Wickham, S. A., and Berninger, U.-G.: Distributions and Biomass of Benthic Ciliates, Foraminifera and Amoeboid Protists in Marine, Brackish, and Freshwater Sediments, J. Eukaryot. Microbiol., 61, 493–508, 2014.
Li, Z.-P., Tao, M.-X., Li, L.-W., Wang, Z.-D., Du, L., and Zhang, M.-F.: Determination of isotope composition of dissolved inorganic carbon by gas chromatography-conventional isotope-ratio mass spectrometry, Chinese J. Anal. Chem., 35, 1455–1458, 2007.
Linshy, V., Nigam, R., and Heinz, P.: Response of Shallow Water Benthic Foraminifera to a 13C-Labeled Food Pulse in the Laboratory, in: Approaches to Study Living Foraminifera, 115–131, 2014.
Lipps, J. H. and Valentine, J. W.: The role of foraminifera in the trophic structure of marine communities, Lethaia, 3, 279–286, 1970.
Mayor, D. J., Thornton, B., and Zuur, A. F.: Resource quantity affects benthic microbial community structure and growth efficiency in a temperate intertidal mudflat, PLoS One, 7, e38582, https://doi.org/10.1371/journal.pone.0038582, 2012.
McDonald, J.: Multiple comparisons: Controlling the false discovery rate: Benjamini–Hochberg procedure, Handbook of Biological Statistics, Baltimore, Maryland: Sparkly House Publishing, 254–60, 2014.
Melis, R. and Covelli, S.: Distribution and morphological abnormalities of recent foraminifera in the Marano and Grado Lagoon (North Adriatic Sea, Italy), Mediterranean Marine Science, 14, 432–450, 2013.
Middelburg, J. J., Barranguet, C., Boschker, H. T., Herman, P. M., Moens, T., and Heip, C. H.: The fate of intertidal microphytobenthos carbon: An in situ 13C-labeling study, Limnol. Oceanogr., 45, 1224–1234, 2000.
Moodley, L., Van der Zwaan, G., Herman, P., Kempers, L., and Van Breugel, P.: Differential response of benthic meiofauna to anoxia with special reference to Foraminifera (Protista: Sarcodina), Mar. Ecol.-Prog. Ser., 158, 151–163, 1997.
Moodley, L., Boschker, H., Middelburg, J., Pel, R., Herman, P., De Deckere, E., and Heip, C.: Ecological significance of benthic foraminifera: 13C labelling experiments, Mar. Ecol.-Prog. Ser., 202, 289–295, 2000.
Moodley, L., Middelburg, J. J., Boschker, H. T., Duineveld, G. C., Pel, R., Herman, P. M., and Heip, C. H.: Bacteria and Foraminifera: key players in a short term deep-sea benthic response to phytodetritus, Mar. Ecol.-Prog. Ser., 236, 23–29, 2002.
Moser, B. K. and Stevens, G. R.: Homogeneity of variance in the two-sample means test, Am. Stat., 46, 19–21, 1992.
Muller, W. A. and Lee, J. J.: Apparent indispensability of bacteria in foraminiferan nutrition, J. Protozool., 16, 471–478, 1969.
Murray, J. W.: Ecology and palaeoecology of benthic foraminifera, Routledge, 2014.
Murray, J. W. and Alve, E.: Major aspects of foraminiferal variability (standing crop and biomass) on a monthly scale in an intertidal zone, J. Foramin. Res., 30, 177–191, 2000.
Nomaki, H., Heinz, P., Nakatsuka, T., Shimanaga, M., and Kitazato, H.: Species-specific ingestion of organic carbon by deep-sea benthic foraminifera and meiobenthos: In situ tracer experiments, Limnol. Oceanogr., 50, 134–146, 2005.
Nomaki, H., Heinz, P., Nakatsuka, T., Shimanaga, M., Ohkouchi, N., Ogawa, N. O., Kogure, K., Ikemoto, E., and Kitazato, H.: Different ingestion patterns of 13C-labeled bacteria and algae by deep-sea benthic foraminifera, Mar. Ecol.-Prog. Ser., 310, 95–108, 2006.
Nomaki, H., Ogawa, N. O., Ohkouchi, N., Suga, H., Toyofuku, T., Shimanaga, M., Nakatsuka, T., and Kitazato, H.: Benthic foraminifera as trophic links between phytodetritus and benthic metazoans: carbon and nitrogen isotopic evidence, Mar. Ecol.-Prog. Ser., 357, 153–164, 2008.
Nomaki, H., Ohkouchi, N., Heinz, P., Suga, H., Chikaraishi, Y., Ogawa, N. O., Matsumoto, K., and Kitazato, H.: Degradation of algal lipids by deep-sea benthic foraminifera: an in situ tracer experiment, Deep Sea Res. Pt. I, 56, 1488–1503, 2009.
Nomaki, H., Ogawa, N. O., Takano, Y., Suga, H., Ohkouchi, N., and Kitazato, H.: Differing utilization of glucose and algal particulate organic matter by deep-sea benthic organisms of Sagami Bay, Japan, Mar. Ecol.-Prog. Ser., 431, 11–24, 2011.
O'Connor, M. I., Piehler, M. F., Leech, D. M., Anton, A., and Bruno, J. F.: Warming and resource availability shift food web structure and metabolism, PLoS Biol, 7, e1000178, https://doi.org/10.1371/journal.pbio.1000178, 2009.
Papaspyrou, S., Diz, P., García-Robledo, E., Corzo, A., and Jimenez-Arias, J.-L.: Benthic foraminiferal community changes and their relationship to environmental dynamics in intertidal muddy sediments (Bay of Cádiz, SW Spain), Mar. Ecol.-Prog. Ser., 490, 121–135, 2013.
Parmesan, C.: Ecological and evolutionary responses to recent climate change, AAnnu. Rev. Ecol. Evol. S., 37, 637–669, 2006.
Pascal, P.-Y., Dupuy, C., Mallet, C., Richard, P., and Niquil, N.: Bacterivory by benthic organisms in sediment: Quantification using 15 N-enriched bacteria, J. Exp. Mar. Biol. Ecol., 355, 18–26, 2008a.
Pascal, P.-Y., Dupuy, C., Richard, P., and Niquil, N.: Bacterivory in the common foraminifer Ammonia tepida: Isotope tracer experiment and the controlling factors, J. Exp. Mar. Biol. Ecol., 359, 55–61, 2008b.
Petchey, O. L., Brose, U., and Rall, B. C.: Predicting the effects of temperature on food web connectance, Philos. T. R. Soc. Lond. B, 365, 2081–2091, 2010.
Pillet, L., de Vargas, C., and Pawlowski, J.: Molecular identification of sequestered diatom chloroplasts and kleptoplastidy in foraminifera, Protist, 162, 394–404, 2011.
Quijón, P. A., Kelly, M. C., and Snelgrove, P. V.: The role of sinking phytodetritus in structuring shallow-water benthic communities, J. Exp. Mar. Biol. Ecol., 366, 134–145, 2008.
R Development Core Team: A language and environment for statistical computing, R Foundation for Statistical Computing, Vienna, Austria, 2008.
Rivkin, R. and DeLaca, T.: Trophic dynamics in Antarctic benthic communities. I. In situ ingestion of microalgae by Foraminifera and metazoan meiofauna, Marine Ecol.-Prog. Ser., 64, 129–136, 1990.
RStudio Team: RStudio: Integrated Development Environment for R, RStudio, Inc., Boston, MA, available at: http://www.rstudio.com/ (last access: 2015), 2015.
Ruxton, G. D.: The unequal variance t-test is an underused alternative to Student's t-test and the Mann–Whitney U test, Behav. Ecol., 17, 688–690, 2006.
Schafer, C., Cole, F., Frobel, D., Rice, N., and Buzas, M.: An in situ experiment on temperature sensitivity of nearshore temperate benthic foraminifera, Oceanographic Literature Review, 9, 913, 1996.
Scholz, B. and Liebezeit, G.: Microphytobenthic dynamics in a Wadden Sea intertidal flat–Part II: Seasonal and spatial variability of non-diatom community components in relation to abiotic parameters, Eur. J. Phycol., 47, 120–137, 2012.
Sterner, R. W. and Elser, J. J.: Ecological stoichiometry: the biology of elements from molecules to the biosphere, Princeton University Press, 2002.
Sweetman, A. K., Sommer, S., Pfannkuche, O., and Witte, U.: Retarded response by macrofauna-size foraminifera to phytodetritus in a deep Norwegian fjord, J. Foramin. Res., 39, 15–22, 2009.
Taipale, S. J. and Sonninen, E.: The influence of preservation method and time on the δ13C value of dissolved inorganic carbon in water samples, Rapid Commun. Mass Sp., 23, 2507–2510, 2009.
Topping, J., Murray, J., and Pond, D.: Sewage effects on the food sources and diet of benthic foraminifera living in oxic sediment: a microcosm experiment, J. Exp. Mar. Biol. Ecol., 329, 239–250, 2006.
Vázouez-Domínguez, E., Vaque, D., and Gasol, J. M.: Ocean warming enhances respiration and carbon demand of coastal microbial plankton, Glob. Change Biol., 13, 1327–1334, 2007.
Ward, J. N., Pond, D. W., and Murray, J. W.: Feeding of benthic foraminifera on diatoms and sewage-derived organic matter: an experimental application of lipid biomarker techniques, Mar. Environ. Res., 56, 515–530, 2003.
Wasserstein, R. L. and Boyer Jr., J. E.: Bounds on the power of linear rank tests for scale parameters, Am. Stat., 45, 10–13, 1991.
Whiteley, N. and Faulkner, L.: Temperature influences whole-animal rates of metabolism but not protein synthesis in a temperate intertidal isopod, Physiol. Biochem. Zool., 78, 227–238, 2005.
Wickham, H.: ggplot2: Elegant Graphics for Data Analysis, Springer-Verlag New York, available at: http://ggplot2.org (last access: 2016), 2009.
Wickham, H.: The Split-Apply-Combine Strategy for Data Analysis, J. Stat. Softw., 40, 1–29, 2011.
Witte, U., Wenzhöfer, F., Sommer, S., Boetius, A., Heinz, P., Aberle, N., Sand, M., Cremer, A., Abraham, W.-R., Jørgensen, B., and Pfannkuche, O.: In situ experimental evidence of the fate of a phytodetritus pulse at the abyssal sea floor, Nature, 424, 763–766, 2003.
Wohlers, J., Engel, A., Zöllner, E., Breithaupt, P., Jürgens, K., Hoppe, H.-G., Sommer, U., and Riebesell, U.: Changes in biogenic carbon flow in response to sea surface warming, P. Natl. Acad. Sci. USA, 106, 7067–7072, 2009.
Yvon-Durocher, G., Jones, J. I., Trimmer, M., Woodward, G., and Montoya, J. M.: Warming alters the metabolic balance of ecosystems, Philos. T. R. Soc. Lond. B, 365, 2117–2126, 2010.
Zuur, A. F., Ieno, E. N., and Elphick, C. S.: A protocol for data exploration to avoid common statistical problems, Methods in Ecology and Evolution, 1, 3–14, 2010.
Short summary
This study reports the response of two intertidal foraminifera to increased temperatures on the level of carbon and nitrogen uptake. Interspecific variations in the ability to cope with shifting environmental variables within the two commonly associated species show that temperature and food source might be critical factors that control their abundances. This should support the interpretation of sediment samples and increase knowledge about nutrient fluxes through foraminiferal communities.
This study reports the response of two intertidal foraminifera to increased temperatures on the...
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