Articles | Volume 15, issue 5
https://doi.org/10.5194/bg-15-1579-2018
© Author(s) 2018. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/bg-15-1579-2018
© Author(s) 2018. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Research article
| 
15 Mar 2018
Research article |
| 15 Mar 2018
| 15 Mar 2018
Coupling physics and biogeochemistry thanks to high-resolution observations of the phytoplankton community structure in the northwestern Mediterranean Sea
Pierre Marrec
CORRESPONDING AUTHOR
Aix Marseille Univ, Université de Toulon, CNRS, IRD, MIO UM 110, 13288, Marseille,
France
Gérald Grégori
Aix Marseille Univ, Université de Toulon, CNRS, IRD, MIO UM 110, 13288, Marseille,
France
Andrea M. Doglioli
Aix Marseille Univ, Université de Toulon, CNRS, IRD, MIO UM 110, 13288, Marseille,
France
Mathilde Dugenne
Aix Marseille Univ, Université de Toulon, CNRS, IRD, MIO UM 110, 13288, Marseille,
France
Alice Della Penna
Aix Marseille Univ, Université de Toulon, CNRS, IRD, MIO UM 110, 13288, Marseille,
France
Nagib Bhairy
Aix Marseille Univ, Université de Toulon, CNRS, IRD, MIO UM 110, 13288, Marseille,
France
Thierry Cariou
Sorbonne
Universités, UPMC Univ Paris 06, CNRS, Fédération de Recherche
(FR2424), Station Biologique de Roscoff, 29680, Roscoff, France
Sandra Hélias Nunige
Aix Marseille Univ, Université de Toulon, CNRS, IRD, MIO UM 110, 13288, Marseille,
France
Soumaya Lahbib
Aix Marseille Univ, Université de Toulon, CNRS, IRD, MIO UM 110, 13288, Marseille,
France
Gilles Rougier
Aix Marseille Univ, Université de Toulon, CNRS, IRD, MIO UM 110, 13288, Marseille,
France
Thibaut Wagener
Aix Marseille Univ, Université de Toulon, CNRS, IRD, MIO UM 110, 13288, Marseille,
France
Melilotus Thyssen
Aix Marseille Univ, Université de Toulon, CNRS, IRD, MIO UM 110, 13288, Marseille,
France
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Stéphanie H. M. Jacquet, Christian Tamburini, Marc Garel, Aurélie Dufour, France Van Vambeke, Frédéric A. C. Le Moigne, Nagib Bhairy, and Sophie Guasco
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Elvira Pulido-Villena, Karine Desboeufs, Kahina Djaoudi, France Van Wambeke, Stéphanie Barrillon, Andrea Doglioli, Anne Petrenko, Vincent Taillandier, Franck Fu, Tiphanie Gaillard, Sophie Guasco, Sandra Nunige, Sylvain Triquet, and Cécile Guieu
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Frédéric Gazeau, Céline Ridame, France Van Wambeke, Samir Alliouane, Christian Stolpe, Jean-Olivier Irisson, Sophie Marro, Jean-Michel Grisoni, Guillaume De Liège, Sandra Nunige, Kahina Djaoudi, Elvira Pulido-Villena, Julie Dinasquet, Ingrid Obernosterer, Philippe Catala, and Cécile Guieu
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This paper shows that the impacts of Saharan dust deposition in different Mediterranean basins are as strong as those observed in coastal waters but differed substantially between the three tested stations, differences attributed to variable initial metabolic states. A stronger impact of warming and acidification on mineralization suggests a decreased capacity of Mediterranean surface communities to sequester CO2 following the deposition of atmospheric particles in the coming decades.
Evelyn Freney, Karine Sellegri, Alessia Nicosia, Leah R. Williams, Matteo Rinaldi, Jonathan T. Trueblood, André S. H. Prévôt, Melilotus Thyssen, Gérald Grégori, Nils Haëntjens, Julie Dinasquet, Ingrid Obernosterer, France Van Wambeke, Anja Engel, Birthe Zäncker, Karine Desboeufs, Eija Asmi, Hilkka Timonen, and Cécile Guieu
Atmos. Chem. Phys., 21, 10625–10641, https://doi.org/10.5194/acp-21-10625-2021, https://doi.org/10.5194/acp-21-10625-2021, 2021
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In this work, we present observations of the organic aerosol content in primary sea spray aerosols (SSAs) continuously generated along a 5-week cruise in the Mediterranean. This information is combined with seawater biogeochemical properties also measured continuously along the ship track to develop a number of parametrizations that can be used in models to determine SSA organic content in oligotrophic waters that represent 60 % of the oceans from commonly measured seawater variables.
Matthieu Roy-Barman, Lorna Foliot, Eric Douville, Nathalie Leblond, Fréderic Gazeau, Matthieu Bressac, Thibaut Wagener, Céline Ridame, Karine Desboeufs, and Cécile Guieu
Biogeosciences, 18, 2663–2678, https://doi.org/10.5194/bg-18-2663-2021, https://doi.org/10.5194/bg-18-2663-2021, 2021
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The release of insoluble elements such as aluminum (Al), iron (Fe), rare earth elements (REEs), thorium (Th) and protactinium (Pa) when Saharan dust falls over the Mediterranean Sea was studied during tank experiments under present and future climate conditions. Each element exhibited different dissolution kinetics and dissolution fractions (always lower than a few percent). Changes in temperature and/or pH under greenhouse conditions lead to a lower Th release and a higher light REE release.
Stéphanie H. M. Jacquet, Dominique Lefèvre, Christian Tamburini, Marc Garel, Frédéric A. C. Le Moigne, Nagib Bhairy, and Sophie Guasco
Biogeosciences, 18, 2205–2212, https://doi.org/10.5194/bg-18-2205-2021, https://doi.org/10.5194/bg-18-2205-2021, 2021
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Jonathan V. Trueblood, Alessia Nicosia, Anja Engel, Birthe Zäncker, Matteo Rinaldi, Evelyn Freney, Melilotus Thyssen, Ingrid Obernosterer, Julie Dinasquet, Franco Belosi, Antonio Tovar-Sánchez, Araceli Rodriguez-Romero, Gianni Santachiara, Cécile Guieu, and Karine Sellegri
Atmos. Chem. Phys., 21, 4659–4676, https://doi.org/10.5194/acp-21-4659-2021, https://doi.org/10.5194/acp-21-4659-2021, 2021
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Sea spray aerosols (SSAs) can be an important source of ice-nucleating particles (INPs) that impact cloud properties over the oceans. In the Mediterranean Sea, we found that the INPs in the seawater surface microlayer increased by an order of magnitude after a rain dust event that impacted iron and bacterial abundances. The INP properties of SSA (INPSSA) increased after a 3 d delay. Outside this event, INPSSA could be parameterized as a function of the seawater biogeochemistry.
Katixa Lajaunie-Salla, Frédéric Diaz, Cathy Wimart-Rousseau, Thibaut Wagener, Dominique Lefèvre, Christophe Yohia, Irène Xueref-Remy, Brian Nathan, Alexandre Armengaud, and Christel Pinazo
Geosci. Model Dev., 14, 295–321, https://doi.org/10.5194/gmd-14-295-2021, https://doi.org/10.5194/gmd-14-295-2021, 2021
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A biogeochemical model of planktonic food webs including a carbonate balance module is applied in the Bay of Marseille (France) to represent the carbon marine cycle expected to change in the future owing to significant increases in anthropogenic emissions of CO2. The model correctly simulates the ranges and seasonal dynamics of most variables of the carbonate system (pH). This study shows that external physical forcings have an important impact on the carbonate equilibrium in this coastal area.
Kahina Djaoudi, France Van Wambeke, Aude Barani, Nagib Bhairy, Servanne Chevaillier, Karine Desboeufs, Sandra Nunige, Mohamed Labiadh, Thierry Henry des Tureaux, Dominique Lefèvre, Amel Nouara, Christos Panagiotopoulos, Marc Tedetti, and Elvira Pulido-Villena
Biogeosciences, 17, 6271–6285, https://doi.org/10.5194/bg-17-6271-2020, https://doi.org/10.5194/bg-17-6271-2020, 2020
Cécile Guieu, Fabrizio D'Ortenzio, François Dulac, Vincent Taillandier, Andrea Doglioli, Anne Petrenko, Stéphanie Barrillon, Marc Mallet, Pierre Nabat, and Karine Desboeufs
Biogeosciences, 17, 5563–5585, https://doi.org/10.5194/bg-17-5563-2020, https://doi.org/10.5194/bg-17-5563-2020, 2020
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We describe here the objectives and strategy of the PEACETIME project and cruise, dedicated to dust deposition and its impacts in the Mediterranean Sea. Our strategy to go a step further forward than in previous approaches in understanding these impacts by catching a real deposition event at sea is detailed. We summarize the work performed at sea, the type of data acquired and their valorization in the papers published in the special issue.
Antonio Tovar-Sánchez, Araceli Rodríguez-Romero, Anja Engel, Birthe Zäncker, Franck Fu, Emilio Marañón, María Pérez-Lorenzo, Matthieu Bressac, Thibaut Wagener, Sylvain Triquet, Guillaume Siour, Karine Desboeufs, and Cécile Guieu
Biogeosciences, 17, 2349–2364, https://doi.org/10.5194/bg-17-2349-2020, https://doi.org/10.5194/bg-17-2349-2020, 2020
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Residence times of particulate metals derived from aerosol deposition in the Sea Surface Microlayer of the Mediterranean Sea ranged from a couple of minutes (e.g., for Fe) to a few hours (e.g., for Cu). Microbial activity seems to play an important role in in this process and in the concentration and distribution of metals between diferent water layers.
Pierre Garreau, Franck Dumas, Stéphanie Louazel, Stéphanie Correard, Solenn Fercocq, Marc Le Menn, Alain Serpette, Valérie Garnier, Alexandre Stegner, Briac Le Vu, Andrea Doglioli, and Gerald Gregori
Earth Syst. Sci. Data, 12, 441–456, https://doi.org/10.5194/essd-12-441-2020, https://doi.org/10.5194/essd-12-441-2020, 2020
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The oceanic circulation is composed of the main currents, of large eddies and meanders, and of fine motions at a scale of about a few hundreds of metres, rarely observed in situ. PROTEVS-MED experiments were devoted to very high resolution observations of water properties (temperature and salinity) and currents, thanks to an undulating trawled vehicle revealing a patchy, stirred and energetic ocean in the first 400 m depth. These fine-scale dynamics drive the plankton and air–sea exchanges.
Pascale Bouruet-Aubertot, Yannis Cuypers, Andrea Doglioli, Mathieu Caffin, Christophe Yohia, Alain de Verneil, Anne Petrenko, Dominique Lefèvre, Hervé Le Goff, Gilles Rougier, Marc Picheral, and Thierry Moutin
Biogeosciences, 15, 7485–7504, https://doi.org/10.5194/bg-15-7485-2018, https://doi.org/10.5194/bg-15-7485-2018, 2018
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The OUTPACE cruise took place between New Caledonia and French Polynesia. The main purpose was to understand how micro-organisms can survive in a very poor environment. One main source of nutrients is at depth, below the euphotic layer where micro-organisms live. The purpose of the turbulence measurements was to determine to which extent turbulence may
upliftnutrients into the euphotic layer. The origin of the turbulence that was found contrasted along the transect was also determined.
Audrey Gimenez, Melika Baklouti, Thibaut Wagener, and Thierry Moutin
Biogeosciences, 15, 6573–6589, https://doi.org/10.5194/bg-15-6573-2018, https://doi.org/10.5194/bg-15-6573-2018, 2018
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During the OUTPACE cruise conducted in the oligotrophic to ultra-oligotrophic region of the western tropical South Pacific, two contrasted regions were sampled in terms of N2 fixation rates, primary production rates and nutrient availability. The aim of this work was to investigate the role of N2 fixation in the differences observed between the two contrasted areas by comparing two simulations only differing by the presence or not of N2 fixers using a 1-D biogeochemical–physical coupled model.
Karine Leblanc, Véronique Cornet, Peggy Rimmelin-Maury, Olivier Grosso, Sandra Hélias-Nunige, Camille Brunet, Hervé Claustre, Joséphine Ras, Nathalie Leblond, and Bernard Quéguiner
Biogeosciences, 15, 5595–5620, https://doi.org/10.5194/bg-15-5595-2018, https://doi.org/10.5194/bg-15-5595-2018, 2018
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The Si biogeochemical cycle was studied during two oceanographic cruises in the tropical South Pacific in 2005 and 2015, between New Caledonia and the Chilean upwelling (8–34° S). Some of the lowest levels of biogenic silica stocks were found in the southern Pacific gyre, where Chlorophyll a concentrations are most depleted worldwide. Size-fractionated biogenic silica concentrations as well as Si kinetic uptake experiments revealed biological Si uptake by the picoplanktonic size fraction.
Thibaut Wagener, Nicolas Metzl, Mathieu Caffin, Jonathan Fin, Sandra Helias Nunige, Dominique Lefevre, Claire Lo Monaco, Gilles Rougier, and Thierry Moutin
Biogeosciences, 15, 5221–5236, https://doi.org/10.5194/bg-15-5221-2018, https://doi.org/10.5194/bg-15-5221-2018, 2018
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The western tropical South Pacific was sampled along a longitudinal 4000 km transect (OUTPACE cruise) for the measurement of carbonate parameters (total alkalinity and total inorganic carbon) between the Melanesian Archipelago and the western part of the South Pacific gyre. This paper reports this new dataset and derived properties. We also estimate anthropogenic carbon distribution in the water column using the TrOCA method.
Sophie Bonnet, Mathieu Caffin, Hugo Berthelot, Olivier Grosso, Mar Benavides, Sandra Helias-Nunige, Cécile Guieu, Marcus Stenegren, and Rachel Ann Foster
Biogeosciences, 15, 4215–4232, https://doi.org/10.5194/bg-15-4215-2018, https://doi.org/10.5194/bg-15-4215-2018, 2018
Mar Benavides, Katyanne M. Shoemaker, Pia H. Moisander, Jutta Niggemann, Thorsten Dittmar, Solange Duhamel, Olivier Grosso, Mireille Pujo-Pay, Sandra Hélias-Nunige, Alain Fumenia, and Sophie Bonnet
Biogeosciences, 15, 3107–3119, https://doi.org/10.5194/bg-15-3107-2018, https://doi.org/10.5194/bg-15-3107-2018, 2018
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We measured N2 fixation rates and identified diazotrophic phylotypes in the mesopelagic layer along a transect spanning from New Caledonia to French Polynesia. N2 fixation rates were low but consistently detected across all depths and stations. A distinct diazotrophic phylotype dominated at 650 dbar, coinciding with the oxygenated Subantarctic Mode Water (SAMW) and suggesting that the distribution of aphotic diazotroph communities is to some extent controlled by water mass structure.
Thierry Moutin, Thibaut Wagener, Mathieu Caffin, Alain Fumenia, Audrey Gimenez, Melika Baklouti, Pascale Bouruet-Aubertot, Mireille Pujo-Pay, Karine Leblanc, Dominique Lefevre, Sandra Helias Nunige, Nathalie Leblond, Olivier Grosso, and Alain de Verneil
Biogeosciences, 15, 2961–2989, https://doi.org/10.5194/bg-15-2961-2018, https://doi.org/10.5194/bg-15-2961-2018, 2018
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Surface waters of the western tropical South Pacific were sampled along a longitudinal 4000 km transect during the stratified period between the Melanesian Archipelago and the western part of the South Pacific gyre. We found a significant biological carbon pump sustained almost exclusively by N2 fixation and essentially controlled by phosphate availability in the iron-rich Melanesian Archipelago waters which appears to be a net sink for atmospheric CO2 while the gyre is in a quasi-steady state.
Mathieu Caffin, Thierry Moutin, Rachel Ann Foster, Pascale Bouruet-Aubertot, Andrea Michelangelo Doglioli, Hugo Berthelot, Cécile Guieu, Olivier Grosso, Sandra Helias-Nunige, Nathalie Leblond, Audrey Gimenez, Anne Alexandra Petrenko, Alain de Verneil, and Sophie Bonnet
Biogeosciences, 15, 2565–2585, https://doi.org/10.5194/bg-15-2565-2018, https://doi.org/10.5194/bg-15-2565-2018, 2018
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We performed N budgets to assess the role of N2 fixation on production and export in the western tropical South Pacific Ocean. We deployed a combination of techniques including high-sensitivity measurements of N input and sediment traps deployment. We demonstrated that N2 fixation was the major source of new N before atmospheric deposition and upward nitrate fluxes. It contributed significantly to organic matter export, indicating a high efficiency of this region to export carbon.
Louise Rousselet, Alain de Verneil, Andrea M. Doglioli, Anne A. Petrenko, Solange Duhamel, Christophe Maes, and Bruno Blanke
Biogeosciences, 15, 2411–2431, https://doi.org/10.5194/bg-15-2411-2018, https://doi.org/10.5194/bg-15-2411-2018, 2018
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The patterns of the large- and fine-scale surface circulation on biogeochemical and biological distributions are examined in the western tropical South Pacific (WTSP) in the context of the OUTPACE oceanographic cruise. The combined use of in situ and satellite data allows for the identification of water mass transport pathways and fine-scale structures, such as fronts, that drive surface distribution of tracers and microbial community structures.
Alain de Verneil, Louise Rousselet, Andrea M. Doglioli, Anne A. Petrenko, Christophe Maes, Pascale Bouruet-Aubertot, and Thierry Moutin
Biogeosciences, 15, 2125–2147, https://doi.org/10.5194/bg-15-2125-2018, https://doi.org/10.5194/bg-15-2125-2018, 2018
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Oceanographic campaigns to measure biogeochemical processes popularly deploy drifters with onboard incubations to stay in a single body of water. Here, we aggregate physical data taken during such a cruise, OUTPACE, to independently test in a new approach whether the drifter really stayed in what can be considered a single biological or chemical environment. This study concludes that future campaigns would benefit from similar data collection and analysis to validate their sampling strategy.
Vincent Taillandier, Thibaut Wagener, Fabrizio D'Ortenzio, Nicolas Mayot, Hervé Legoff, Joséphine Ras, Laurent Coppola, Orens Pasqueron de Fommervault, Catherine Schmechtig, Emilie Diamond, Henry Bittig, Dominique Lefevre, Edouard Leymarie, Antoine Poteau, and Louis Prieur
Earth Syst. Sci. Data, 10, 627–641, https://doi.org/10.5194/essd-10-627-2018, https://doi.org/10.5194/essd-10-627-2018, 2018
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We report on data from an oceanographic cruise, covering western, central and eastern parts of the Mediterranean Sea. This cruise was fully dedicated to the maintenance and the metrological verification of a biogeochemical observing system based on a fleet of BGC-Argo floats.
Alain Fumenia, Thierry Moutin, Sophie Bonnet, Mar Benavides, Anne Petrenko, Sandra Helias Nunige, and Christophe Maes
Biogeosciences Discuss., https://doi.org/10.5194/bg-2017-557, https://doi.org/10.5194/bg-2017-557, 2018
Revised manuscript not accepted
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The Melanesian archipelago waters between 160° E and 170° W are characterized by a significant N2 fixation rates and an excess of particulate organic nitrogen compared to the canonical ratio of Redfield and a positive N*. We hypothesize that the southern branch of the subtropical gyre is probably the main vector of excess nitrogen transport in the thermocline waters showing an influence of nitrogen fixation occurring in the western tropical in a large part of the South Pacific.
Alain de Verneil, Louise Rousselet, Andrea M. Doglioli, Anne A. Petrenko, and Thierry Moutin
Biogeosciences, 14, 3471–3486, https://doi.org/10.5194/bg-14-3471-2017, https://doi.org/10.5194/bg-14-3471-2017, 2017
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A surface summer plankton bloom in the western tropical South Pacific was sampled during the Oligotrophy to UlTra-oligotrophy PACific Experiment (OUTPACE) cruise. We characterize the bloom's properties and the circulation responsible for its evolution. Nitrogen fixation helped sustain the bloom, and larger-scale flows, rather than the smaller ones, explain its movements. Future studies of blooms in this region can make use of these findings to track the horizontal export of plankton production.
Thierry Moutin, Andrea Michelangelo Doglioli, Alain de Verneil, and Sophie Bonnet
Biogeosciences, 14, 3207–3220, https://doi.org/10.5194/bg-14-3207-2017, https://doi.org/10.5194/bg-14-3207-2017, 2017
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The overall goal of OUTPACE was to obtain a successful representation of the interactions between planktonic organisms and the cycle of biogenic elements in the western tropical South Pacific Ocean across trophic and N2 fixation gradients. The international OUTPACE cruise took place between 18 February and 3 April 2015 aboard the RV L’Atalante and involved 60 scientists. The transect covered ~4 000 km from the western part of the Melanesian archipelago to the western boundary of the gyre.
P. Marrec, T. Cariou, E. Macé, P. Morin, L. A. Salt, M. Vernet, B. Taylor, K. Paxman, and Y. Bozec
Biogeosciences, 12, 5371–5391, https://doi.org/10.5194/bg-12-5371-2015, https://doi.org/10.5194/bg-12-5371-2015, 2015
M. Thyssen, S. Alvain, A. Lefèbvre, D. Dessailly, M. Rijkeboer, N. Guiselin, V. Creach, and L.-F. Artigas
Biogeosciences, 12, 4051–4066, https://doi.org/10.5194/bg-12-4051-2015, https://doi.org/10.5194/bg-12-4051-2015, 2015
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Phytoplankton community structure at a high spatial resolution (<3km) was studied in the North Sea during a cruise in May 2011. A first comparison with PHYSAT reflectance anomalies enables the extrapolation of the community structure rather than a dominant type at the North Sea scale and was interpreted with its hydrological characteristics. This will seriously improve our understanding of the influence of community structure on biogeochemical processes at the daily and basin scales.
K. Desboeufs, N. Leblond, T. Wagener, E. Bon Nguyen, and C. Guieu
Biogeosciences, 11, 5581–5594, https://doi.org/10.5194/bg-11-5581-2014, https://doi.org/10.5194/bg-11-5581-2014, 2014
Related subject area
Biogeochemistry: Open Ocean
Ocean acidification trends and carbonate system dynamics across the North Atlantic subpolar gyre water masses during 2009–2019
Sedimentary organic matter signature hints at the phytoplankton-driven biological carbon pump in the central Arabian Sea
Hydrological cycle amplification imposes spatial patterns on the climate change response of ocean pH and carbonate chemistry
Assessing the tropical Atlantic biogeochemical processes in the Norwegian Earth System Model
Evolution of oxygen and stratification and their relationship in the North Pacific Ocean in CMIP6 Earth system models
Evaluation of CMIP6 model performance in simulating historical biogeochemistry across the southern South China Sea
Drivers of decadal trends in the ocean carbon sink in the past, present, and future in Earth system models
Anthropogenic carbon storage and its decadal changes in the Atlantic between 1990–2020
Ocean alkalinity enhancement impacts: regrowth of marine microalgae in alkaline mineral concentrations simulating the initial concentrations after ship-based dispersions
Climatic controls on metabolic constraints in the ocean
Effects of grain size and seawater salinity on magnesium hydroxide dissolution and secondary calcium carbonate precipitation kinetics: implications for ocean alkalinity enhancement
Spatial distributions of iron and manganese in surface waters in the Arctic’s Laptev and East Siberian seas
Short-term response of Emiliania huxleyi growth and morphology to abrupt salinity stress
Massive and localized export of selected marine snow types at eddy edges in the South Atlantic Ocean
Assessing the impact of CO2-equilibrated ocean alkalinity enhancement on microbial metabolic rates in an oligotrophic system
Phosphomonoesterase and phosphodiesterase activities in the eastern Mediterranean in two contrasting seasonal situations
Net primary production annual maxima in the North Atlantic projected to shift in the 21st century
Biogeochemistry of climate driven shifts in Southern Ocean primary producers
Testing the influence of light on nitrite cycling in the eastern tropical North Pacific
Loss of nitrogen via anaerobic ammonium oxidation (anammox) in the California Current system during the late Quaternary
Technical note: Assessment of float pH data quality control methods – a case study in the subpolar northwest Atlantic Ocean
Linking northeastern North Pacific oxygen changes to upstream surface outcrop variations
Underestimation of multi-decadal global O2 loss due to an optimal interpolation method
Reviews and syntheses: expanding the global coverage of gross primary production and net community production measurements using Biogeochemical-Argo floats
Characteristics of surface physical and biogeochemical parameters within mesoscale eddies in the Southern Ocean
Seasonal dynamics and annual budget of dissolved inorganic carbon in the northwestern Mediterranean deep-convection region
The fingerprint of climate variability on the surface ocean cycling of iron and its isotopes
Reconstructing the ocean's mesopelagic zone carbon budget: sensitivity and estimation of parameters associated with prokaryotic remineralization
Seasonal cycles of biogeochemical fluxes in the Scotia Sea, Southern Ocean: a stable isotope approach
Absence of photophysiological response to iron addition in autumn phytoplankton in the Antarctic sea-ice zone
Optimal parameters for the ocean's nutrient, carbon, and oxygen cycles compensate for circulation biases but replumb the biological pump
Importance of multiple sources of iron for the upper-ocean biogeochemistry over the northern Indian Ocean
Exploring the role of different data types and timescales in the quality of marine biogeochemical model calibration
All about nitrite: exploring nitrite sources and sinks in the eastern tropical North Pacific oxygen minimum zone
Fossil coccolith morphological attributes as a new proxy for deep ocean carbonate chemistry
Reconstructing ocean carbon storage with CMIP6 Earth system models and synthetic Argo observations
Using machine learning and Biogeochemical-Argo (BGC-Argo) floats to assess biogeochemical models and optimize observing system design
The representation of alkalinity and the carbonate pump from CMIP5 to CMIP6 Earth system models and implications for the carbon cycle
Model estimates of metazoans' contributions to the biological carbon pump
Tracing differences in iron supply to the Mid-Atlantic Ridge valley between hydrothermal vent sites: implications for the addition of iron to the deep ocean
Nitrite cycling in the primary nitrite maxima of the eastern tropical North Pacific
Hotspots and drivers of compound marine heatwaves and low net primary production extremes
Ecosystem impacts of marine heat waves in the northeast Pacific
Tracing the role of Arctic shelf processes in Si and N cycling and export through the Fram Strait: insights from combined silicon and nitrate isotopes
Controls on the relative abundances and rates of nitrifying microorganisms in the ocean
The response of diazotrophs to nutrient amendment in the South China Sea and western North Pacific
Influence of GEOTRACES data distribution and misfit function choice on objective parameter retrieval in a marine zinc cycle model
Physiological flexibility of phytoplankton impacts modelled chlorophyll and primary production across the North Pacific Ocean
Observation-constrained estimates of the global ocean carbon sink from Earth system models
Early winter barium excess in the southern Indian Ocean as an annual remineralisation proxy (GEOTRACES GIPr07 cruise)
David Curbelo-Hernández, Fiz F. Pérez, Melchor González-Dávila, Sergey V. Gladyshev, Aridane G. González, David González-Santana, Antón Velo, Alexey Sokov, and J. Magdalena Santana-Casiano
Biogeosciences, 21, 5561–5589, https://doi.org/10.5194/bg-21-5561-2024, https://doi.org/10.5194/bg-21-5561-2024, 2024
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The study evaluated CO2–carbonate system dynamics in the North Atlantic subpolar gyre during 2009–2019. Significant ocean acidification, largely due to rising anthropogenic CO2 levels, was found. Cooling, freshening, and enhanced convective processes intensified this trend, affecting calcite and aragonite saturation. The findings contribute to a deeper understanding of ocean acidification and improve our knowledge about its impact on marine ecosystems.
Medhavi Pandey, Haimanti Biswas, Daniel Birgel, Nicole Burdanowitz, and Birgit Gaye
Biogeosciences, 21, 4681–4698, https://doi.org/10.5194/bg-21-4681-2024, https://doi.org/10.5194/bg-21-4681-2024, 2024
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We analysed sea surface temperature (SST) proxy and plankton biomarkers in sediments that accumulate sinking material signatures from surface waters in the central Arabian Sea (21°–11° N, 64° E), a tropical basin impacted by monsoons. We saw a north–south SST gradient, and the biological proxies showed more organic matter from larger algae in the north. Smaller algae and zooplankton were more numerous in the south. These trends were related to ocean–atmospheric processes and oxygen availability.
Allison Hogikyan and Laure Resplandy
Biogeosciences, 21, 4621–4636, https://doi.org/10.5194/bg-21-4621-2024, https://doi.org/10.5194/bg-21-4621-2024, 2024
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Rising atmospheric CO2 influences ocean carbon chemistry, leading to ocean acidification. Global warming introduces spatial patterns in the intensity of ocean acidification. We show that the most prominent spatial patterns are controlled by warming-driven changes in rainfall and evaporation, not by the direct effect of warming on carbon chemistry and pH. These evaporation and rainfall patterns oppose acidification in saltier parts of the ocean and enhance acidification in fresher regions.
Shunya Koseki, Lander R. Crespo, Jerry Tjiputra, Filippa Fransner, Noel S. Keenlyside, and David Rivas
Biogeosciences, 21, 4149–4168, https://doi.org/10.5194/bg-21-4149-2024, https://doi.org/10.5194/bg-21-4149-2024, 2024
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We investigated how the physical biases of an Earth system model influence the marine biogeochemical processes in the tropical Atlantic. With four different configurations of the model, we have shown that the versions with better SST reproduction tend to better represent the primary production and air–sea CO2 flux in terms of climatology, seasonal cycle, and response to climate variability.
Lyuba Novi, Annalisa Bracco, Takamitsu Ito, and Yohei Takano
Biogeosciences, 21, 3985–4005, https://doi.org/10.5194/bg-21-3985-2024, https://doi.org/10.5194/bg-21-3985-2024, 2024
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We explored the relationship between oxygen and stratification in the North Pacific Ocean using a combination of data mining and machine learning. We used isopycnic potential vorticity (IPV) as an indicator to quantify ocean ventilation and analyzed its predictability, a strong O2–IPV connection, and predictability for IPV in the tropical Pacific. This opens new routes for monitoring ocean O2 through few observational sites co-located with more abundant IPV measurements in the tropical Pacific.
Winfred Marshal, Jing Xiang Chung, Nur Hidayah Roseli, Roswati Md Amin, and Mohd Fadzil Bin Mohd Akhir
Biogeosciences, 21, 4007–4035, https://doi.org/10.5194/bg-21-4007-2024, https://doi.org/10.5194/bg-21-4007-2024, 2024
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This study stands out for thoroughly examining CMIP6 ESMs' ability to simulate biogeochemical variables in the southern South China Sea, an economically important region. It assesses variables like chlorophyll, phytoplankton, nitrate, and oxygen on annual and seasonal scales. While global assessments exist, this study addresses a gap by objectively ranking 13 CMIP6 ocean biogeochemistry models' performance at a regional level, focusing on replicating specific observed biogeochemical variables.
Jens Terhaar
Biogeosciences, 21, 3903–3926, https://doi.org/10.5194/bg-21-3903-2024, https://doi.org/10.5194/bg-21-3903-2024, 2024
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Despite the ocean’s importance in the carbon cycle and hence the climate, observing the ocean carbon sink remains challenging. Here, I use an ensemble of 12 models to understand drivers of decadal trends of the past, present, and future ocean carbon sink. I show that 80 % of the decadal trends in the multi-model mean ocean carbon sink can be explained by changes in decadal trends in atmospheric CO2. The remaining 20 % are due to internal climate variability and ocean heat uptake.
Reiner Steinfeldt, Monika Rhein, and Dagmar Kieke
Biogeosciences, 21, 3839–3867, https://doi.org/10.5194/bg-21-3839-2024, https://doi.org/10.5194/bg-21-3839-2024, 2024
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We calculate the amount of anthropogenic carbon (Cant) in the Atlantic for the years 1990, 2000, 2010 and 2020. Cant is the carbon that is taken up by the ocean as a result of humanmade CO2 emissions. To determine the amount of Cant, we apply a technique that is based on the observations of other humanmade gases (e.g., chlorofluorocarbons). Regionally, changes in ocean ventilation have an impact on the storage of Cant. Overall, the increase in Cant is driven by the rising CO2 in the atmosphere.
Stephanie Delacroix, Tor Jensen Nystuen, August E. Dessen Tobiesen, Andrew L. King, and Erik Höglund
Biogeosciences, 21, 3677–3690, https://doi.org/10.5194/bg-21-3677-2024, https://doi.org/10.5194/bg-21-3677-2024, 2024
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The addition of alkaline minerals into the ocean might reduce excessive anthropogenic CO2 emissions. Magnesium hydroxide can be added in large amounts because of its low seawater solubility without reaching harmful pH levels. The toxicity effect results of magnesium hydroxide, by simulating the expected concentrations from a ship's dispersion scenario, demonstrated low impacts on both sensitive and local assemblages of marine microalgae when compared to calcium hydroxide.
Precious Mongwe, Matthew Long, Takamitsu Ito, Curtis Deutsch, and Yeray Santana-Falcón
Biogeosciences, 21, 3477–3490, https://doi.org/10.5194/bg-21-3477-2024, https://doi.org/10.5194/bg-21-3477-2024, 2024
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We use a collection of measurements that capture the physiological sensitivity of organisms to temperature and oxygen and a CESM1 large ensemble to investigate how natural climate variations and climate warming will impact the ability of marine heterotrophic marine organisms to support habitats in the future. We find that warming and dissolved oxygen loss over the next several decades will reduce the volume of ocean habitats and will increase organisms' vulnerability to extremes.
Charly A. Moras, Tyler Cyronak, Lennart T. Bach, Renaud Joannes-Boyau, and Kai G. Schulz
Biogeosciences, 21, 3463–3475, https://doi.org/10.5194/bg-21-3463-2024, https://doi.org/10.5194/bg-21-3463-2024, 2024
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We investigate the effects of mineral grain size and seawater salinity on magnesium hydroxide dissolution and calcium carbonate precipitation kinetics for ocean alkalinity enhancement. Salinity did not affect the dissolution, but calcium carbonate formed earlier at lower salinities due to the lower magnesium and dissolved organic carbon concentrations. Smaller grain sizes dissolved faster but calcium carbonate precipitated earlier, suggesting that medium grain sizes are optimal for kinetics.
Naoya Kanna, Kazutaka Tateyama, Takuji Waseda, Anna Timofeeva, Maria Papadimitraki, Laura Whitmore, Hajime Obata, Daiki Nomura, Hiroshi Ogawa, Youhei Yamashita, and Igor Polyakov
EGUsphere, https://doi.org/10.5194/egusphere-2024-1834, https://doi.org/10.5194/egusphere-2024-1834, 2024
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This article presents data on iron and manganese, which are essential micronutrients for primary producers, on the surface of the Arctic’s Laptev and East Siberian Seas (LESS). Observations were made in international cooperation with the NABOS expedition during the late summer of 2021 in the Arctic Ocean. The results from this study indicate that the major factors controlling these metal concentrations in LESS are river discharge and the input of shelf sediment.
Rosie M. Sheward, Christina Gebühr, Jörg Bollmann, and Jens O. Herrle
Biogeosciences, 21, 3121–3141, https://doi.org/10.5194/bg-21-3121-2024, https://doi.org/10.5194/bg-21-3121-2024, 2024
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How quickly do marine microorganisms respond to salinity stress? Our experiments with the calcifying marine plankton Emiliania huxleyi show that growth and cell morphology responded to salinity stress within as little as 24–48 hours, demonstrating that morphology and calcification are sensitive to salinity over a range of timescales. Our results have implications for understanding the short-term role of E. huxleyi in biogeochemical cycles and in size-based paleoproxies for salinity.
Alexandre Accardo, Rémi Laxenaire, Alberto Baudena, Sabrina Speich, Rainer Kiko, and Lars Stemmann
EGUsphere, https://doi.org/10.5194/egusphere-2024-1558, https://doi.org/10.5194/egusphere-2024-1558, 2024
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The open ocean helps mitigate climate change by storing CO2 through the biological carbon pump (BCP). The BCP involves processes like phytoplankton capturing CO2 and sequestering it in the deep ocean via marine snow production. We found significant marine snow accumulation from the surface to 600 meters deep in frontal regions between eddies. We suggest that the coupling of hydrodynamics at eddy edges and biological activity (via planktonic organisms) may enhanced this process.
Laura Marín-Samper, Javier Arístegui, Nauzet Hernández-Hernández, Joaquín Ortiz, Stephen D. Archer, Andrea Ludwig, and Ulf Riebesell
Biogeosciences, 21, 2859–2876, https://doi.org/10.5194/bg-21-2859-2024, https://doi.org/10.5194/bg-21-2859-2024, 2024
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Our planet is facing a climate crisis. Scientists are working on innovative solutions that will aid in capturing the hard to abate emissions before it is too late. Exciting research reveals that ocean alkalinity enhancement, a key climate change mitigation strategy, does not harm phytoplankton, the cornerstone of marine ecosystems. Through meticulous study, we may have uncovered a positive relationship: up to a specific limit, enhancing ocean alkalinity boosts photosynthesis by certain species.
France Van Wambeke, Pascal Conan, Mireille Pujo-Pay, Vincent Taillandier, Olivier Crispi, Alexandra Pavlidou, Sandra Nunige, Morgane Didry, Christophe Salmeron, and Elvira Pulido-Villena
Biogeosciences, 21, 2621–2640, https://doi.org/10.5194/bg-21-2621-2024, https://doi.org/10.5194/bg-21-2621-2024, 2024
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Phosphomonoesterase (PME) and phosphodiesterase (PDE) activities over the epipelagic zone are described in the eastern Mediterranean Sea in winter and autumn. The types of concentration kinetics obtained for PDE (saturation at 50 µM, high Km, high turnover times) compared to those of PME (saturation at 1 µM, low Km, low turnover times) are discussed in regard to the possible inequal distribution of PDE and PME in the size continuum of organic material and accessibility to phosphodiesters.
Jenny Hieronymus, Magnus Hieronymus, Matthias Gröger, Jörg Schwinger, Raffaele Bernadello, Etienne Tourigny, Valentina Sicardi, Itzel Ruvalcaba Baroni, and Klaus Wyser
Biogeosciences, 21, 2189–2206, https://doi.org/10.5194/bg-21-2189-2024, https://doi.org/10.5194/bg-21-2189-2024, 2024
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The timing of the net primary production annual maxima in the North Atlantic in the period 1750–2100 is investigated using two Earth system models and the high-emissions scenario SSP5-8.5. It is found that, for most of the region, the annual maxima occur progressively earlier, with the most change occurring after the year 2000. Shifts in the seasonality of the primary production may impact the entire ecosystem, which highlights the need for long-term monitoring campaigns in this area.
Ben J. Fisher, Alex J. Poulton, Michael P. Meredith, Kimberlee Baldry, Oscar Schofield, and Sian F. Henley
EGUsphere, https://doi.org/10.5194/egusphere-2024-990, https://doi.org/10.5194/egusphere-2024-990, 2024
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The Southern Ocean is a rapidly warming environment, with subsequent impacts on ecosystems and biogeochemical cycling. This study examines changes in phytoplankton and biogeochemistry using a range of climate models. Under climate change the Southern Ocean will be warmer, more acidic, more productive and have reduced nutrient availability by 2100. However, there is substantial variability between models across key productivity parameters, we propose ways of reducing this uncertainty.
Nicole M. Travis, Colette L. Kelly, and Karen L. Casciotti
Biogeosciences, 21, 1985–2004, https://doi.org/10.5194/bg-21-1985-2024, https://doi.org/10.5194/bg-21-1985-2024, 2024
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We conducted experimental manipulations of light level on microbial communities from the primary nitrite maximum. Overall, while individual microbial processes have different directions and magnitudes in their response to increasing light, the net community response is a decline in nitrite production with increasing light. We conclude that while increased light may decrease net nitrite production, high-light conditions alone do not exclude nitrification from occurring in the surface ocean.
Zoë Rebecca van Kemenade, Zeynep Erdem, Ellen Christine Hopmans, Jaap Smede Sinninghe Damsté, and Darci Rush
Biogeosciences, 21, 1517–1532, https://doi.org/10.5194/bg-21-1517-2024, https://doi.org/10.5194/bg-21-1517-2024, 2024
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The California Current system (CCS) hosts the eastern subtropical North Pacific oxygen minimum zone (ESTNP OMZ). This study shows anaerobic ammonium oxidizing (anammox) bacteria cause a loss of bioavailable nitrogen (N) in the ESTNP OMZ throughout the late Quaternary. Anammox occurred during both glacial and interglacial periods and was driven by the supply of organic matter and changes in ocean currents. These findings may have important consequences for biogeochemical models of the CCS.
Cathy Wimart-Rousseau, Tobias Steinhoff, Birgit Klein, Henry Bittig, and Arne Körtzinger
Biogeosciences, 21, 1191–1211, https://doi.org/10.5194/bg-21-1191-2024, https://doi.org/10.5194/bg-21-1191-2024, 2024
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The marine CO2 system can be measured independently and continuously by BGC-Argo floats since numerous pH sensors have been developed to suit these autonomous measurements platforms. By applying the Argo correction routines to float pH data acquired in the subpolar North Atlantic Ocean, we report the uncertainty and lack of objective criteria associated with the choice of the reference method as well the reference depth for the pH correction.
Sabine Mecking and Kyla Drushka
Biogeosciences, 21, 1117–1133, https://doi.org/10.5194/bg-21-1117-2024, https://doi.org/10.5194/bg-21-1117-2024, 2024
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This study investigates whether northeastern North Pacific oxygen changes may be caused by surface density changes in the northwest as water moves along density horizons from the surface into the subsurface ocean. A correlation is found with a lag that about matches the travel time of water from the northwest to the northeast. Salinity is the main driver causing decadal changes in surface density, whereas salinity and temperature contribute about equally to long-term declining density trends.
Takamitsu Ito, Hernan E. Garcia, Zhankun Wang, Shoshiro Minobe, Matthew C. Long, Just Cebrian, James Reagan, Tim Boyer, Christopher Paver, Courtney Bouchard, Yohei Takano, Seth Bushinsky, Ahron Cervania, and Curtis A. Deutsch
Biogeosciences, 21, 747–759, https://doi.org/10.5194/bg-21-747-2024, https://doi.org/10.5194/bg-21-747-2024, 2024
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This study aims to estimate how much oceanic oxygen has been lost and its uncertainties. One major source of uncertainty comes from the statistical gap-filling methods. Outputs from Earth system models are used to generate synthetic observations where oxygen data are extracted from the model output at the location and time of historical oceanographic cruises. Reconstructed oxygen trend is approximately two-thirds of the true trend.
Robert W. Izett, Katja Fennel, Adam C. Stoer, and David P. Nicholson
Biogeosciences, 21, 13–47, https://doi.org/10.5194/bg-21-13-2024, https://doi.org/10.5194/bg-21-13-2024, 2024
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This paper provides an overview of the capacity to expand the global coverage of marine primary production estimates using autonomous ocean-going instruments, called Biogeochemical-Argo floats. We review existing approaches to quantifying primary production using floats, provide examples of the current implementation of the methods, and offer insights into how they can be better exploited. This paper is timely, given the ongoing expansion of the Biogeochemical-Argo array.
Qian Liu, Yingjie Liu, and Xiaofeng Li
Biogeosciences, 20, 4857–4874, https://doi.org/10.5194/bg-20-4857-2023, https://doi.org/10.5194/bg-20-4857-2023, 2023
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In the Southern Ocean, abundant eddies behave opposite to our expectations. That is, anticyclonic (cyclonic) eddies are cold (warm). By investigating the variations of physical and biochemical parameters in eddies, we find that abnormal eddies have unique and significant effects on modulating the parameters. This study fills a gap in understanding the effects of abnormal eddies on physical and biochemical parameters in the Southern Ocean.
Caroline Ulses, Claude Estournel, Patrick Marsaleix, Karline Soetaert, Marine Fourrier, Laurent Coppola, Dominique Lefèvre, Franck Touratier, Catherine Goyet, Véronique Guglielmi, Fayçal Kessouri, Pierre Testor, and Xavier Durrieu de Madron
Biogeosciences, 20, 4683–4710, https://doi.org/10.5194/bg-20-4683-2023, https://doi.org/10.5194/bg-20-4683-2023, 2023
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Deep convection plays a key role in the circulation, thermodynamics, and biogeochemical cycles in the Mediterranean Sea, considered to be a hotspot of biodiversity and climate change. In this study, we investigate the seasonal and annual budget of dissolved inorganic carbon in the deep-convection area of the northwestern Mediterranean Sea.
Daniela König and Alessandro Tagliabue
Biogeosciences, 20, 4197–4212, https://doi.org/10.5194/bg-20-4197-2023, https://doi.org/10.5194/bg-20-4197-2023, 2023
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Using model simulations, we show that natural and anthropogenic changes in the global climate leave a distinct fingerprint in the isotopic signatures of iron in the surface ocean. We find that these climate effects on iron isotopes are often caused by the redistribution of iron from different external sources to the ocean, due to changes in ocean currents, and by changes in algal growth, which take up iron. Thus, isotopes may help detect climate-induced changes in iron supply and algal uptake.
Chloé Baumas, Robin Fuchs, Marc Garel, Jean-Christophe Poggiale, Laurent Memery, Frédéric A. C. Le Moigne, and Christian Tamburini
Biogeosciences, 20, 4165–4182, https://doi.org/10.5194/bg-20-4165-2023, https://doi.org/10.5194/bg-20-4165-2023, 2023
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Through the sink of particles in the ocean, carbon (C) is exported and sequestered when reaching 1000 m. Attempts to quantify C exported vs. C consumed by heterotrophs have increased. Yet most of the conducted estimations have led to C demands several times higher than C export. The choice of parameters greatly impacts the results. As theses parameters are overlooked, non-accurate values are often used. In this study we show that C budgets can be well balanced when using appropriate values.
Anna Belcher, Sian F. Henley, Katharine Hendry, Marianne Wootton, Lisa Friberg, Ursula Dallman, Tong Wang, Christopher Coath, and Clara Manno
Biogeosciences, 20, 3573–3591, https://doi.org/10.5194/bg-20-3573-2023, https://doi.org/10.5194/bg-20-3573-2023, 2023
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The oceans play a crucial role in the uptake of atmospheric carbon dioxide, particularly the Southern Ocean. The biological pumping of carbon from the surface to the deep ocean is key to this. Using sediment trap samples from the Scotia Sea, we examine biogeochemical fluxes of carbon, nitrogen, and biogenic silica and their stable isotope compositions. We find phytoplankton community structure and physically mediated processes are important controls on particulate fluxes to the deep ocean.
Asmita Singh, Susanne Fietz, Sandy J. Thomalla, Nicolas Sanchez, Murat V. Ardelan, Sébastien Moreau, Hanna M. Kauko, Agneta Fransson, Melissa Chierici, Saumik Samanta, Thato N. Mtshali, Alakendra N. Roychoudhury, and Thomas J. Ryan-Keogh
Biogeosciences, 20, 3073–3091, https://doi.org/10.5194/bg-20-3073-2023, https://doi.org/10.5194/bg-20-3073-2023, 2023
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Despite the scarcity of iron in the Southern Ocean, seasonal blooms occur due to changes in nutrient and light availability. Surprisingly, during an autumn bloom in the Antarctic sea-ice zone, the results from incubation experiments showed no significant photophysiological response of phytoplankton to iron addition. This suggests that ambient iron concentrations were sufficient, challenging the notion of iron deficiency in the Southern Ocean through extended iron-replete post-bloom conditions.
Benoît Pasquier, Mark Holzer, Matthew A. Chamberlain, Richard J. Matear, Nathaniel L. Bindoff, and François W. Primeau
Biogeosciences, 20, 2985–3009, https://doi.org/10.5194/bg-20-2985-2023, https://doi.org/10.5194/bg-20-2985-2023, 2023
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Modeling the ocean's carbon and oxygen cycles accurately is challenging. Parameter optimization improves the fit to observed tracers but can introduce artifacts in the biological pump. Organic-matter production and subsurface remineralization rates adjust to compensate for circulation biases, changing the pathways and timescales with which nutrients return to the surface. Circulation biases can thus strongly alter the system’s response to ecological change, even when parameters are optimized.
Priyanka Banerjee
Biogeosciences, 20, 2613–2643, https://doi.org/10.5194/bg-20-2613-2023, https://doi.org/10.5194/bg-20-2613-2023, 2023
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This study shows that atmospheric deposition is the most important source of iron to the upper northern Indian Ocean for phytoplankton growth. This is followed by iron from continental-shelf sediment. Phytoplankton increase following iron addition is possible only with high background levels of nitrate. Vertical mixing is the most important physical process supplying iron to the upper ocean in this region throughout the year. The importance of ocean currents in supplying iron varies seasonally.
Iris Kriest, Julia Getzlaff, Angela Landolfi, Volkmar Sauerland, Markus Schartau, and Andreas Oschlies
Biogeosciences, 20, 2645–2669, https://doi.org/10.5194/bg-20-2645-2023, https://doi.org/10.5194/bg-20-2645-2023, 2023
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Global biogeochemical ocean models are often subjectively assessed and tuned against observations. We applied different strategies to calibrate a global model against observations. Although the calibrated models show similar tracer distributions at the surface, they differ in global biogeochemical fluxes, especially in global particle flux. Simulated global volume of oxygen minimum zones varies strongly with calibration strategy and over time, rendering its temporal extrapolation difficult.
John C. Tracey, Andrew R. Babbin, Elizabeth Wallace, Xin Sun, Katherine L. DuRussel, Claudia Frey, Donald E. Martocello III, Tyler Tamasi, Sergey Oleynik, and Bess B. Ward
Biogeosciences, 20, 2499–2523, https://doi.org/10.5194/bg-20-2499-2023, https://doi.org/10.5194/bg-20-2499-2023, 2023
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Nitrogen (N) is essential for life; thus, its availability plays a key role in determining marine productivity. Using incubations of seawater spiked with a rare form of N measurable on a mass spectrometer, we quantified microbial pathways that determine marine N availability. The results show that pathways that recycle N have higher rates than those that result in its loss from biomass and present new evidence for anaerobic nitrite oxidation, a process long thought to be strictly aerobic.
Amanda Gerotto, Hongrui Zhang, Renata Hanae Nagai, Heather M. Stoll, Rubens César Lopes Figueira, Chuanlian Liu, and Iván Hernández-Almeida
Biogeosciences, 20, 1725–1739, https://doi.org/10.5194/bg-20-1725-2023, https://doi.org/10.5194/bg-20-1725-2023, 2023
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Based on the analysis of the response of coccolithophores’ morphological attributes in a laboratory dissolution experiment and surface sediment samples from the South China Sea, we proposed that the thickness shape (ks) factor of fossil coccoliths together with the normalized ks variation, which is the ratio of the standard deviation of ks (σ) over the mean ks (σ/ks), is a robust and novel proxy to reconstruct past changes in deep ocean carbon chemistry.
Katherine E. Turner, Doug M. Smith, Anna Katavouta, and Richard G. Williams
Biogeosciences, 20, 1671–1690, https://doi.org/10.5194/bg-20-1671-2023, https://doi.org/10.5194/bg-20-1671-2023, 2023
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We present a new method for reconstructing ocean carbon using climate models and temperature and salinity observations. To test this method, we reconstruct modelled carbon using synthetic observations consistent with current sampling programmes. Sensitivity tests show skill in reconstructing carbon trends and variability within the upper 2000 m. Our results indicate that this method can be used for a new global estimate for ocean carbon content.
Alexandre Mignot, Hervé Claustre, Gianpiero Cossarini, Fabrizio D'Ortenzio, Elodie Gutknecht, Julien Lamouroux, Paolo Lazzari, Coralie Perruche, Stefano Salon, Raphaëlle Sauzède, Vincent Taillandier, and Anna Teruzzi
Biogeosciences, 20, 1405–1422, https://doi.org/10.5194/bg-20-1405-2023, https://doi.org/10.5194/bg-20-1405-2023, 2023
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Numerical models of ocean biogeochemistry are becoming a major tool to detect and predict the impact of climate change on marine resources and monitor ocean health. Here, we demonstrate the use of the global array of BGC-Argo floats for the assessment of biogeochemical models. We first detail the handling of the BGC-Argo data set for model assessment purposes. We then present 23 assessment metrics to quantify the consistency of BGC model simulations with respect to BGC-Argo data.
Alban Planchat, Lester Kwiatkowski, Laurent Bopp, Olivier Torres, James R. Christian, Momme Butenschön, Tomas Lovato, Roland Séférian, Matthew A. Chamberlain, Olivier Aumont, Michio Watanabe, Akitomo Yamamoto, Andrew Yool, Tatiana Ilyina, Hiroyuki Tsujino, Kristen M. Krumhardt, Jörg Schwinger, Jerry Tjiputra, John P. Dunne, and Charles Stock
Biogeosciences, 20, 1195–1257, https://doi.org/10.5194/bg-20-1195-2023, https://doi.org/10.5194/bg-20-1195-2023, 2023
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Ocean alkalinity is critical to the uptake of atmospheric carbon and acidification in surface waters. We review the representation of alkalinity and the associated calcium carbonate cycle in Earth system models. While many parameterizations remain present in the latest generation of models, there is a general improvement in the simulated alkalinity distribution. This improvement is related to an increase in the export of biotic calcium carbonate, which closer resembles observations.
Jérôme Pinti, Tim DeVries, Tommy Norin, Camila Serra-Pompei, Roland Proud, David A. Siegel, Thomas Kiørboe, Colleen M. Petrik, Ken H. Andersen, Andrew S. Brierley, and André W. Visser
Biogeosciences, 20, 997–1009, https://doi.org/10.5194/bg-20-997-2023, https://doi.org/10.5194/bg-20-997-2023, 2023
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Large numbers of marine organisms such as zooplankton and fish perform daily vertical migration between the surface (at night) and the depths (in the daytime). This fascinating migration is important for the carbon cycle, as these organisms actively bring carbon to depths where it is stored away from the atmosphere for a long time. Here, we quantify the contributions of different animals to this carbon drawdown and storage and show that fish are important to the biological carbon pump.
Alastair J. M. Lough, Alessandro Tagliabue, Clément Demasy, Joseph A. Resing, Travis Mellett, Neil J. Wyatt, and Maeve C. Lohan
Biogeosciences, 20, 405–420, https://doi.org/10.5194/bg-20-405-2023, https://doi.org/10.5194/bg-20-405-2023, 2023
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Iron is a key nutrient for ocean primary productivity. Hydrothermal vents are a source of iron to the oceans, but the size of this source is poorly understood. This study examines the variability in iron inputs between hydrothermal vents in different geological settings. The vents studied release different amounts of Fe, resulting in plumes with similar dissolved iron concentrations but different particulate concentrations. This will help to refine modelling of iron-limited ocean productivity.
Nicole M. Travis, Colette L. Kelly, Margaret R. Mulholland, and Karen L. Casciotti
Biogeosciences, 20, 325–347, https://doi.org/10.5194/bg-20-325-2023, https://doi.org/10.5194/bg-20-325-2023, 2023
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The primary nitrite maximum is a ubiquitous upper ocean feature where nitrite accumulates, but we still do not understand its formation and the co-occurring microbial processes involved. Using correlative methods and rates measurements, we found strong spatial patterns between environmental conditions and depths of the nitrite maxima, but not the maximum concentrations. Nitrification was the dominant source of nitrite, with occasional high nitrite production from phytoplankton near the coast.
Natacha Le Grix, Jakob Zscheischler, Keith B. Rodgers, Ryohei Yamaguchi, and Thomas L. Frölicher
Biogeosciences, 19, 5807–5835, https://doi.org/10.5194/bg-19-5807-2022, https://doi.org/10.5194/bg-19-5807-2022, 2022
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Compound events threaten marine ecosystems. Here, we investigate the potentially harmful combination of marine heatwaves with low phytoplankton productivity. Using satellite-based observations, we show that these compound events are frequent in the low latitudes. We then investigate the drivers of these compound events using Earth system models. The models share similar drivers in the low latitudes but disagree in the high latitudes due to divergent factors limiting phytoplankton production.
Abigale M. Wyatt, Laure Resplandy, and Adrian Marchetti
Biogeosciences, 19, 5689–5705, https://doi.org/10.5194/bg-19-5689-2022, https://doi.org/10.5194/bg-19-5689-2022, 2022
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Marine heat waves (MHWs) are a frequent event in the northeast Pacific, with a large impact on the region's ecosystems. Large phytoplankton in the North Pacific Transition Zone are greatly affected by decreased nutrients, with less of an impact in the Alaskan Gyre. For small phytoplankton, MHWs increase the spring small phytoplankton population in both regions thanks to reduced light limitation. In both zones, this results in a significant decrease in the ratio of large to small phytoplankton.
Margot C. F. Debyser, Laetitia Pichevin, Robyn E. Tuerena, Paul A. Dodd, Antonia Doncila, and Raja S. Ganeshram
Biogeosciences, 19, 5499–5520, https://doi.org/10.5194/bg-19-5499-2022, https://doi.org/10.5194/bg-19-5499-2022, 2022
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We focus on the exchange of key nutrients for algae production between the Arctic and Atlantic oceans through the Fram Strait. We show that the export of dissolved silicon here is controlled by the availability of nitrate which is influenced by denitrification on Arctic shelves. We suggest that any future changes in the river inputs of silica and changes in denitrification due to climate change will impact the amount of silicon exported, with impacts on Atlantic algal productivity and ecology.
Emily J. Zakem, Barbara Bayer, Wei Qin, Alyson E. Santoro, Yao Zhang, and Naomi M. Levine
Biogeosciences, 19, 5401–5418, https://doi.org/10.5194/bg-19-5401-2022, https://doi.org/10.5194/bg-19-5401-2022, 2022
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We use a microbial ecosystem model to quantitatively explain the mechanisms controlling observed relative abundances and nitrification rates of ammonia- and nitrite-oxidizing microorganisms in the ocean. We also estimate how much global carbon fixation can be associated with chemoautotrophic nitrification. Our results improve our understanding of the controls on nitrification, laying the groundwork for more accurate predictions in global climate models.
Zuozhu Wen, Thomas J. Browning, Rongbo Dai, Wenwei Wu, Weiying Li, Xiaohua Hu, Wenfang Lin, Lifang Wang, Xin Liu, Zhimian Cao, Haizheng Hong, and Dalin Shi
Biogeosciences, 19, 5237–5250, https://doi.org/10.5194/bg-19-5237-2022, https://doi.org/10.5194/bg-19-5237-2022, 2022
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Fe and P are key factors controlling the biogeography and activity of marine N2-fixing microorganisms. We found lower abundance and activity of N2 fixers in the northern South China Sea than around the western boundary of the North Pacific, and N2 fixation rates switched from Fe–P co-limitation to P limitation. We hypothesize the Fe supply rates and Fe utilization strategies of each N2 fixer are important in regulating spatial variability in community structure across the study area.
Claudia Eisenring, Sophy E. Oliver, Samar Khatiwala, and Gregory F. de Souza
Biogeosciences, 19, 5079–5106, https://doi.org/10.5194/bg-19-5079-2022, https://doi.org/10.5194/bg-19-5079-2022, 2022
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Given the sparsity of observational constraints on micronutrients such as zinc (Zn), we assess the sensitivities of a framework for objective parameter optimisation in an oceanic Zn cycling model. Our ensemble of optimisations towards synthetic data with varying kinds of uncertainty shows that deficiencies related to model complexity and the choice of the misfit function generally have a greater impact on the retrieval of model Zn uptake behaviour than does the limitation of data coverage.
Yoshikazu Sasai, Sherwood Lan Smith, Eko Siswanto, Hideharu Sasaki, and Masami Nonaka
Biogeosciences, 19, 4865–4882, https://doi.org/10.5194/bg-19-4865-2022, https://doi.org/10.5194/bg-19-4865-2022, 2022
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We have investigated the adaptive response of phytoplankton growth to changing light, nutrients, and temperature over the North Pacific using two physical-biological models. We compare modeled chlorophyll and primary production from an inflexible control model (InFlexPFT), which assumes fixed carbon (C):nitrogen (N):chlorophyll (Chl) ratios, to a recently developed flexible phytoplankton functional type model (FlexPFT), which incorporates photoacclimation and variable C:N:Chl ratios.
Jens Terhaar, Thomas L. Frölicher, and Fortunat Joos
Biogeosciences, 19, 4431–4457, https://doi.org/10.5194/bg-19-4431-2022, https://doi.org/10.5194/bg-19-4431-2022, 2022
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Estimates of the ocean sink of anthropogenic carbon vary across various approaches. We show that the global ocean carbon sink can be estimated by three parameters, two of which approximate the ocean ventilation in the Southern Ocean and the North Atlantic, and one of which approximates the chemical capacity of the ocean to take up carbon. With observations of these parameters, we estimate that the global ocean carbon sink is 10 % larger than previously assumed, and we cut uncertainties in half.
Natasha René van Horsten, Hélène Planquette, Géraldine Sarthou, Thomas James Ryan-Keogh, Nolwenn Lemaitre, Thato Nicholas Mtshali, Alakendra Roychoudhury, and Eva Bucciarelli
Biogeosciences, 19, 3209–3224, https://doi.org/10.5194/bg-19-3209-2022, https://doi.org/10.5194/bg-19-3209-2022, 2022
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The remineralisation proxy, barite, was measured along 30°E in the southern Indian Ocean during early austral winter. To our knowledge this is the first reported Southern Ocean winter study. Concentrations throughout the water column were comparable to observations during spring to autumn. By linking satellite primary production to this proxy a possible annual timescale is proposed. These findings also suggest possible carbon remineralisation from satellite data on a basin scale.
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Short summary
The objective of this study was to better understand the variability of the phytoplankton community structure in small physical structures at the surface of the ocean. After identifying such a structure in the Mediterranean Sea, we deployed cutting-edge physical and biological sensors in order to observe at a high frequency the dynamics of this structure. From these observations we described the variations of the phytoplankton community structure and how the physics controls this variability.
The objective of this study was to better understand the variability of the phytoplankton...
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