Articles | Volume 20, issue 19
https://doi.org/10.5194/bg-20-4147-2023
© Author(s) 2023. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/bg-20-4147-2023
© Author(s) 2023. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Research article
| 
11 Oct 2023
Research article |
| 11 Oct 2023
| 11 Oct 2023
Global patterns and drivers of phosphorus fractions in natural soils
Xianjin He
Key Laboratory of the Three Gorges Reservoir Region's Eco-Environment, Ministry of Education, Chongqing University, 400044 Chongqing, China
CEA-CNRS-UVSQ, LSCE/IPSL, Université Paris Saclay, 91190 Gif sur Yvette, France
Laurent Augusto
ISPA, Bordeaux Sciences Agro, INRAE, 33140 Villenave d'Ornon, France
CEA-CNRS-UVSQ, LSCE/IPSL, Université Paris Saclay, 91190 Gif sur Yvette, France
Bruno Ringeval
ISPA, Bordeaux Sciences Agro, INRAE, 33140 Villenave d'Ornon, France
Ying-Ping Wang
CSIRO Environment, Private Bag 10, Clayton South, VIC 3169, Australia
Julian Helfenstein
Agroscope, 8046 Zurich, Switzerland
Soil Geography and Landscape Group, Wageningen University, 6700 AA
Wageningen, the Netherlands
Yuanyuan Huang
Key Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, 100101 Beijing, China
Key Laboratory of Vegetation Restoration and Management of Degraded Ecosystems and Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, 510650 Guangzhou, China
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In this article we provide estimates of mean residence times of phosphorus in inorganic soil phosphorus pools. These values improve our understanding of the dynamics of phosphorus cycling and can be used to improve global land surface models.
Pierre Friedlingstein, Matthew W. Jones, Michael O'Sullivan, Robbie M. Andrew, Judith Hauck, Glen P. Peters, Wouter Peters, Julia Pongratz, Stephen Sitch, Corinne Le Quéré, Dorothee C. E. Bakker, Josep G. Canadell, Philippe Ciais, Robert B. Jackson, Peter Anthoni, Leticia Barbero, Ana Bastos, Vladislav Bastrikov, Meike Becker, Laurent Bopp, Erik Buitenhuis, Naveen Chandra, Frédéric Chevallier, Louise P. Chini, Kim I. Currie, Richard A. Feely, Marion Gehlen, Dennis Gilfillan, Thanos Gkritzalis, Daniel S. Goll, Nicolas Gruber, Sören Gutekunst, Ian Harris, Vanessa Haverd, Richard A. Houghton, George Hurtt, Tatiana Ilyina, Atul K. Jain, Emilie Joetzjer, Jed O. Kaplan, Etsushi Kato, Kees Klein Goldewijk, Jan Ivar Korsbakken, Peter Landschützer, Siv K. Lauvset, Nathalie Lefèvre, Andrew Lenton, Sebastian Lienert, Danica Lombardozzi, Gregg Marland, Patrick C. McGuire, Joe R. Melton, Nicolas Metzl, David R. Munro, Julia E. M. S. Nabel, Shin-Ichiro Nakaoka, Craig Neill, Abdirahman M. Omar, Tsuneo Ono, Anna Peregon, Denis Pierrot, Benjamin Poulter, Gregor Rehder, Laure Resplandy, Eddy Robertson, Christian Rödenbeck, Roland Séférian, Jörg Schwinger, Naomi Smith, Pieter P. Tans, Hanqin Tian, Bronte Tilbrook, Francesco N. Tubiello, Guido R. van der Werf, Andrew J. Wiltshire, and Sönke Zaehle
Earth Syst. Sci. Data, 11, 1783–1838, https://doi.org/10.5194/essd-11-1783-2019, https://doi.org/10.5194/essd-11-1783-2019, 2019
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The Global Carbon Budget 2019 describes the data sets and methodology used to quantify the emissions of carbon dioxide and their partitioning among the atmosphere, land, and ocean. These living data are updated every year to provide the highest transparency and traceability in the reporting of CO2, the key driver of climate change.
Bruno Ringeval, Marko Kvakić, Laurent Augusto, Philippe Ciais, Daniel Goll, Nathaniel D. Mueller, Christoph Müller, Thomas Nesme, Nicolas Vuichard, Xuhui Wang, and Sylvain Pellerin
Biogeosciences Discuss., https://doi.org/10.5194/bg-2019-298, https://doi.org/10.5194/bg-2019-298, 2019
Preprint withdrawn
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Crossed fertilization additions lead to the definition of nutrient interaction categories. However, the implications of such categories in terms of nutrient interaction modeling are not clear. We developed a theoretical analysis of nitrogen and phosphorus fertilization experiments, then applied it to current estimates of nutrient limitation in cropland. We found that a true co-limitation could affect up to 42 % of the global maize area when using a given formalism of nutrient interaction.
Alexander J. Norton, Peter J. Rayner, Ernest N. Koffi, Marko Scholze, Jeremy D. Silver, and Ying-Ping Wang
Biogeosciences, 16, 3069–3093, https://doi.org/10.5194/bg-16-3069-2019, https://doi.org/10.5194/bg-16-3069-2019, 2019
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This study presents an estimate of global terrestrial photosynthesis. We make use of satellite chlorophyll fluorescence measurements, a visible indicator of photosynthesis, to optimize model parameters and estimate photosynthetic carbon uptake. This new framework incorporates nonlinear, process-based understanding of the link between fluorescence and photosynthesis, an advance on past approaches. This will aid in the utility of fluorescence to quantify terrestrial carbon cycle feedbacks.
Yuanyuan Huang, Mark Stacy, Jiang Jiang, Nilutpal Sundi, Shuang Ma, Volodymyr Saruta, Chang Gyo Jung, Zheng Shi, Jianyang Xia, Paul J. Hanson, Daniel Ricciuto, and Yiqi Luo
Geosci. Model Dev., 12, 1119–1137, https://doi.org/10.5194/gmd-12-1119-2019, https://doi.org/10.5194/gmd-12-1119-2019, 2019
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Predicting future changes in ecosystem services is not only highly desirable but is also becoming feasible as several forces are converging to transform ecological research into quantitative forecasting. To realize ecological forecasting, we have developed an Ecological Platform for Assimilating Data (EcoPAD) into models. EcoPAD also has the potential to become an interactive tool for resource management, stimulate citizen science in ecology, and transform environmental education.
Jing Wang, Jianyang Xia, Xuhui Zhou, Kun Huang, Jian Zhou, Yuanyuan Huang, Lifen Jiang, Xia Xu, Junyi Liang, Ying-Ping Wang, Xiaoli Cheng, and Yiqi Luo
Biogeosciences, 16, 917–926, https://doi.org/10.5194/bg-16-917-2019, https://doi.org/10.5194/bg-16-917-2019, 2019
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Soil is critical in mitigating climate change mainly because soil carbon turns over much slower in soils than vegetation and the atmosphere. However, Earth system models (ESMs) have large uncertainty in simulating carbon dynamics due to their biased estimation of soil carbon transit time (τsoil). Here, the τsoil estimates from 12 ESMs that participated in CMIP5 were evaluated by a database of measured τsoil. We detected a large spatial variation in measured τsoil across the globe.
Corinne Le Quéré, Robbie M. Andrew, Pierre Friedlingstein, Stephen Sitch, Judith Hauck, Julia Pongratz, Penelope A. Pickers, Jan Ivar Korsbakken, Glen P. Peters, Josep G. Canadell, Almut Arneth, Vivek K. Arora, Leticia Barbero, Ana Bastos, Laurent Bopp, Frédéric Chevallier, Louise P. Chini, Philippe Ciais, Scott C. Doney, Thanos Gkritzalis, Daniel S. Goll, Ian Harris, Vanessa Haverd, Forrest M. Hoffman, Mario Hoppema, Richard A. Houghton, George Hurtt, Tatiana Ilyina, Atul K. Jain, Truls Johannessen, Chris D. Jones, Etsushi Kato, Ralph F. Keeling, Kees Klein Goldewijk, Peter Landschützer, Nathalie Lefèvre, Sebastian Lienert, Zhu Liu, Danica Lombardozzi, Nicolas Metzl, David R. Munro, Julia E. M. S. Nabel, Shin-ichiro Nakaoka, Craig Neill, Are Olsen, Tsueno Ono, Prabir Patra, Anna Peregon, Wouter Peters, Philippe Peylin, Benjamin Pfeil, Denis Pierrot, Benjamin Poulter, Gregor Rehder, Laure Resplandy, Eddy Robertson, Matthias Rocher, Christian Rödenbeck, Ute Schuster, Jörg Schwinger, Roland Séférian, Ingunn Skjelvan, Tobias Steinhoff, Adrienne Sutton, Pieter P. Tans, Hanqin Tian, Bronte Tilbrook, Francesco N. Tubiello, Ingrid T. van der Laan-Luijkx, Guido R. van der Werf, Nicolas Viovy, Anthony P. Walker, Andrew J. Wiltshire, Rebecca Wright, Sönke Zaehle, and Bo Zheng
Earth Syst. Sci. Data, 10, 2141–2194, https://doi.org/10.5194/essd-10-2141-2018, https://doi.org/10.5194/essd-10-2141-2018, 2018
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The Global Carbon Budget 2018 describes the data sets and methodology used to quantify the emissions of carbon dioxide and their partitioning among the atmosphere, land, and ocean. These living data are updated every year to provide the highest transparency and traceability in the reporting of CO2, the key driver of climate change.
Haicheng Zhang, Daniel S. Goll, Stefano Manzoni, Philippe Ciais, Bertrand Guenet, and Yuanyuan Huang
Geosci. Model Dev., 11, 4779–4796, https://doi.org/10.5194/gmd-11-4779-2018, https://doi.org/10.5194/gmd-11-4779-2018, 2018
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Carbon use efficiency (CUE) of decomposers depends strongly on the organic matter quality (C : N ratio) and soil nutrient availability rather than a fixed value. A soil biogeochemical model with flexible CUE can better capture the differences in respiration rate of litter with contrasting C : N ratios and under different levels of mineral N availability than the model with fixed CUE, and well represent the effect of varying litter quality (N content) on SOM formation across temporal scales.
Qianyu Li, Xingjie Lu, Yingping Wang, Xin Huang, Peter M. Cox, and Yiqi Luo
Biogeosciences, 15, 6909–6925, https://doi.org/10.5194/bg-15-6909-2018, https://doi.org/10.5194/bg-15-6909-2018, 2018
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Land-surface models have been widely used to predict the responses of terrestrial ecosystems to climate change. A better understanding of model mechanisms that govern terrestrial ecosystem responses to rising atmosphere [CO2] is needed. Our study for the first time shows that the expansion of leaf area under rising [CO2] is the most important response for the stimulation of land carbon accumulation by a land-surface model: CABLE. Processes related to leaf area should be better calibrated.
Xingjie Lu, Ying-Ping Wang, Yiqi Luo, and Lifen Jiang
Biogeosciences, 15, 6559–6572, https://doi.org/10.5194/bg-15-6559-2018, https://doi.org/10.5194/bg-15-6559-2018, 2018
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How long does C cycle through terrestrial ecosystems is a critical question for understanding land C sequestration capacity under future rising atmosphere [CO2] and climate warming. Under climate change, previous conventional concepts with a steady-state assumption will no longer be suitable for a non-steady state. Our results using the new concept, C transit time, suggest more significant responses in terrestrial C cycle under rising [CO2] and climate warming.
Yilong Wang, Philippe Ciais, Daniel Goll, Yuanyuan Huang, Yiqi Luo, Ying-Ping Wang, A. Anthony Bloom, Grégoire Broquet, Jens Hartmann, Shushi Peng, Josep Penuelas, Shilong Piao, Jordi Sardans, Benjamin D. Stocker, Rong Wang, Sönke Zaehle, and Sophie Zechmeister-Boltenstern
Geosci. Model Dev., 11, 3903–3928, https://doi.org/10.5194/gmd-11-3903-2018, https://doi.org/10.5194/gmd-11-3903-2018, 2018
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We present a new modeling framework called Global Observation-based Land-ecosystems Utilization Model of Carbon, Nitrogen and Phosphorus (GOLUM-CNP) that combines a data-constrained C-cycle analysis with data-driven estimates of N and P inputs and losses and with observed stoichiometric ratios. GOLUM-CNP provides a traceable tool, where a consistency between different datasets of global C, N, and P cycles has been achieved.
Emilie Joetzjer, Fabienne Maignan, Jérôme Chave, Daniel Goll, Ben Poulter, Jonathan Barichivich, Isabelle Maréchaux, Sebastiaan Luyssaert, Matthieu Guimberteau, Kim Naudts, Damien Bonal, and Philippe Ciais
Biogeosciences Discuss., https://doi.org/10.5194/bg-2018-308, https://doi.org/10.5194/bg-2018-308, 2018
Revised manuscript not accepted
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This study explores the relative contributions of tree demographic, canopy structure and hydraulic processes on the Amazonian carbon and water cycles using large-scale process-based model. Our results imply that explicit coupling of the water and carbon cycles improves the representation of biogeochemical cycles and their spatial variability. Representing the variation in the ecological functioning of Amazonia should be the next step to improve the performance and predictive ability of models.
Alexander J. Norton, Peter J. Rayner, Ernest N. Koffi, Marko Scholze, Jeremy D. Silver, and Ying-Ping Wang
Biogeosciences Discuss., https://doi.org/10.5194/bg-2018-270, https://doi.org/10.5194/bg-2018-270, 2018
Revised manuscript has not been submitted
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This study presents a global estimate of land carbon uptake through photosynthesis. We make use satellite chlorophyll fluorescence measurements, a visible indicator of photosynthesis, to optimize model parameters and then use the optimized model to estimate photosynthetic carbon uptake. This provides a new tool that can combine measurements and observations in a systematic way and maximise the use of chlorophyll fluorescence to improve our understanding of the land carbon cycle.
Wei Li, Chao Yue, Philippe Ciais, Jinfeng Chang, Daniel Goll, Dan Zhu, Shushi Peng, and Albert Jornet-Puig
Geosci. Model Dev., 11, 2249–2272, https://doi.org/10.5194/gmd-11-2249-2018, https://doi.org/10.5194/gmd-11-2249-2018, 2018
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We implemented four major lignocellulosic bioenergy crops in ORCHIDEE. We added new PFTs, did new parameterizations of photosynthesis, carbon allocation, and phenology based on a compilation of field measurements, and added a specific harvest module. The resulting ORCHIDEE-MICT-BIOENERGY model is evaluated at 296 locations where field measurements of harvested biomass are available, and the new model can generally reproduce the global bioenergy crop yield observations.
Donghai Wu, Philippe Ciais, Nicolas Viovy, Alan K. Knapp, Kevin Wilcox, Michael Bahn, Melinda D. Smith, Sara Vicca, Simone Fatichi, Jakob Zscheischler, Yue He, Xiangyi Li, Akihiko Ito, Almut Arneth, Anna Harper, Anna Ukkola, Athanasios Paschalis, Benjamin Poulter, Changhui Peng, Daniel Ricciuto, David Reinthaler, Guangsheng Chen, Hanqin Tian, Hélène Genet, Jiafu Mao, Johannes Ingrisch, Julia E. S. M. Nabel, Julia Pongratz, Lena R. Boysen, Markus Kautz, Michael Schmitt, Patrick Meir, Qiuan Zhu, Roland Hasibeder, Sebastian Sippel, Shree R. S. Dangal, Stephen Sitch, Xiaoying Shi, Yingping Wang, Yiqi Luo, Yongwen Liu, and Shilong Piao
Biogeosciences, 15, 3421–3437, https://doi.org/10.5194/bg-15-3421-2018, https://doi.org/10.5194/bg-15-3421-2018, 2018
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Our results indicate that most ecosystem models do not capture the observed asymmetric responses under normal precipitation conditions, suggesting an overestimate of the drought effects and/or underestimate of the watering impacts on primary productivity, which may be the result of inadequate representation of key eco-hydrological processes. Collaboration between modelers and site investigators needs to be strengthened to improve the specific processes in ecosystem models in following studies.
Ye Huang, Bertrand Guenet, Philippe Ciais, Ivan A. Janssens, Jennifer L. Soong, Yilong Wang, Daniel Goll, Evgenia Blagodatskaya, and Yuanyuan Huang
Geosci. Model Dev., 11, 2111–2138, https://doi.org/10.5194/gmd-11-2111-2018, https://doi.org/10.5194/gmd-11-2111-2018, 2018
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ORCHIMIC is a modeling effort trying to improve the representation of SOC dynamics in Earth system models (ESM). It has a structure that can be easily incorporated into CENTURY-based ESMs. In ORCHIMIC, key microbial dynamics (i.e., enzyme production, enzymatic decomposition and microbial dormancy) are included. The ORCHIMIC model can also reproduce the observed temporal dynamics of respiration and priming effects; thus it is an improved tool for climate projections and SOC response predictions.
Matthieu Guimberteau, Dan Zhu, Fabienne Maignan, Ye Huang, Chao Yue, Sarah Dantec-Nédélec, Catherine Ottlé, Albert Jornet-Puig, Ana Bastos, Pierre Laurent, Daniel Goll, Simon Bowring, Jinfeng Chang, Bertrand Guenet, Marwa Tifafi, Shushi Peng, Gerhard Krinner, Agnès Ducharne, Fuxing Wang, Tao Wang, Xuhui Wang, Yilong Wang, Zun Yin, Ronny Lauerwald, Emilie Joetzjer, Chunjing Qiu, Hyungjun Kim, and Philippe Ciais
Geosci. Model Dev., 11, 121–163, https://doi.org/10.5194/gmd-11-121-2018, https://doi.org/10.5194/gmd-11-121-2018, 2018
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Improved projections of future Arctic and boreal ecosystem transformation require improved land surface models that integrate processes specific to these cold biomes. To this end, this study lays out relevant new parameterizations in the ORCHIDEE-MICT land surface model. These describe the interactions between soil carbon, soil temperature and hydrology, and their resulting feedbacks on water and CO2 fluxes, in addition to a recently developed fire module.
Fei Lun, Junguo Liu, Philippe Ciais, Thomas Nesme, Jinfeng Chang, Rong Wang, Daniel Goll, Jordi Sardans, Josep Peñuelas, and Michael Obersteiner
Earth Syst. Sci. Data, 10, 1–18, https://doi.org/10.5194/essd-10-1-2018, https://doi.org/10.5194/essd-10-1-2018, 2018
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We quantified in detail the P budgets in agricultural systems and PUE on global, regional, and national scales from 2002 to 2010. Globally, half of the total P inputs into agricultural systems accumulated in agricultural soils, with the rest lost to bodies of water. There are great differences in P budgets and PUE in agricultural systems on global, regional, and national scales. International trade played a significant role in P redistribution and P in fertilizer and food among countries.
Julian Helfenstein, Jannes Jegminat, Timothy I. McLaren, and Emmanuel Frossard
Biogeosciences, 15, 105–114, https://doi.org/10.5194/bg-15-105-2018, https://doi.org/10.5194/bg-15-105-2018, 2018
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Soil solution phosphorus (P) turnover is essential for describing the bioavailability of this important nutrient. Here, we provide a derivation of calculating soil solution P turnover using parameters obtained from isotope exchange kinetic experiments. We then calculated and analyzed soil solution P turnover for 217 soils and for 18 long-term P fertilizer field experiments worldwide. Our study thus provides important insights on P dynamics in soils.
Rhys Whitley, Jason Beringer, Lindsay B. Hutley, Gabriel Abramowitz, Martin G. De Kauwe, Bradley Evans, Vanessa Haverd, Longhui Li, Caitlin Moore, Youngryel Ryu, Simon Scheiter, Stanislaus J. Schymanski, Benjamin Smith, Ying-Ping Wang, Mathew Williams, and Qiang Yu
Biogeosciences, 14, 4711–4732, https://doi.org/10.5194/bg-14-4711-2017, https://doi.org/10.5194/bg-14-4711-2017, 2017
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This paper attempts to review some of the current challenges faced by the modelling community in simulating the behaviour of savanna ecosystems. We provide a particular focus on three dynamic processes (phenology, root-water access, and fire) that are characteristic of savannas, which we believe are not adequately represented in current-generation terrestrial biosphere models. We highlight reasons for these misrepresentations, possible solutions and a future direction for research in this area.
Daniel S. Goll, Nicolas Vuichard, Fabienne Maignan, Albert Jornet-Puig, Jordi Sardans, Aurelie Violette, Shushi Peng, Yan Sun, Marko Kvakic, Matthieu Guimberteau, Bertrand Guenet, Soenke Zaehle, Josep Penuelas, Ivan Janssens, and Philippe Ciais
Geosci. Model Dev., 10, 3745–3770, https://doi.org/10.5194/gmd-10-3745-2017, https://doi.org/10.5194/gmd-10-3745-2017, 2017
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We describe a representation of the terrestrial phosphorus cycle for the ORCHIDEE land surface model. The model is able to reproduce the observed shift from nitrogen to phosphorus limited net primary productivity along a soil formation chronosequence in Hawaii, as well as the contrasting responses of net primary productivity to nutrient addition. However, the simulated nutrient use efficiencies are lower, as observed primarily due to biases in the nutrient content and turnover of woody biomass.
Rachel M. Law, Tilo Ziehn, Richard J. Matear, Andrew Lenton, Matthew A. Chamberlain, Lauren E. Stevens, Ying-Ping Wang, Jhan Srbinovsky, Daohua Bi, Hailin Yan, and Peter F. Vohralik
Geosci. Model Dev., 10, 2567–2590, https://doi.org/10.5194/gmd-10-2567-2017, https://doi.org/10.5194/gmd-10-2567-2017, 2017
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The paper describes a version of the Australian Community Climate and Earth System Simulator that has been enabled to simulate the carbon cycle, which is designated ACCESS-ESM1. The model performance for pre-industrial conditions is assessed and land and ocean carbon fluxes are found to be simulated realistically.
Daniel S. Goll, Alexander J. Winkler, Thomas Raddatz, Ning Dong, Ian Colin Prentice, Philippe Ciais, and Victor Brovkin
Geosci. Model Dev., 10, 2009–2030, https://doi.org/10.5194/gmd-10-2009-2017, https://doi.org/10.5194/gmd-10-2009-2017, 2017
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The response of soil organic carbon decomposition to warming and the interactions between nitrogen and carbon cycling affect the feedbacks between the land carbon cycle and the climate. In the model JSBACH carbon–nitrogen interactions have only a small effect on the feedbacks, whereas modifications of soil organic carbon decomposition have a large effect. The carbon cycle in the improved model is more resilient to climatic changes than in previous version of the model.
Yiqi Luo, Zheng Shi, Xingjie Lu, Jianyang Xia, Junyi Liang, Jiang Jiang, Ying Wang, Matthew J. Smith, Lifen Jiang, Anders Ahlström, Benito Chen, Oleksandra Hararuk, Alan Hastings, Forrest Hoffman, Belinda Medlyn, Shuli Niu, Martin Rasmussen, Katherine Todd-Brown, and Ying-Ping Wang
Biogeosciences, 14, 145–161, https://doi.org/10.5194/bg-14-145-2017, https://doi.org/10.5194/bg-14-145-2017, 2017
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Climate change is strongly regulated by land carbon cycle. However, we lack the ability to predict future land carbon sequestration. Here, we develop a novel framework for understanding what determines the direction and rate of future change in land carbon storage. The framework offers a suite of new approaches to revolutionize land carbon model evaluation and improvement.
Eva A. Kowalczyk, Lauren E. Stevens, Rachel M. Law, Ian N. Harman, Martin Dix, Charmaine N. Franklin, and Ying-Ping Wang
Geosci. Model Dev., 9, 2771–2791, https://doi.org/10.5194/gmd-9-2771-2016, https://doi.org/10.5194/gmd-9-2771-2016, 2016
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This paper compares two ACCESS model versions that differ only in their land surface scheme. Differences in the simulated present-day climate are attributed to differences in the representation of various land surface processes.
Rashid Rafique, Jianyang Xia, Oleksandra Hararuk, Ghassem R. Asrar, Guoyong Leng, Yingping Wang, and Yiqi Luo
Earth Syst. Dynam., 7, 649–658, https://doi.org/10.5194/esd-7-649-2016, https://doi.org/10.5194/esd-7-649-2016, 2016
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Traceability analysis was used to diagnose the causes of differences in simulating ecosystem carbon storage capacity between two land models: CLMA-CASA and CABLE. Results showed that the simulated ecosystem carbon storage capacity is largely influenced by the photosynthesis parameterization, residence time and organic matter decomposition.
Anna M. Ukkola, Andy J. Pitman, Mark Decker, Martin G. De Kauwe, Gab Abramowitz, Jatin Kala, and Ying-Ping Wang
Hydrol. Earth Syst. Sci., 20, 2403–2419, https://doi.org/10.5194/hess-20-2403-2016, https://doi.org/10.5194/hess-20-2403-2016, 2016
Rhys Whitley, Jason Beringer, Lindsay B. Hutley, Gab Abramowitz, Martin G. De Kauwe, Remko Duursma, Bradley Evans, Vanessa Haverd, Longhui Li, Youngryel Ryu, Benjamin Smith, Ying-Ping Wang, Mathew Williams, and Qiang Yu
Biogeosciences, 13, 3245–3265, https://doi.org/10.5194/bg-13-3245-2016, https://doi.org/10.5194/bg-13-3245-2016, 2016
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In this study we assess how well terrestrial biosphere models perform at predicting water and carbon cycling for savanna ecosystems. We apply our models to five savanna sites in Northern Australia and highlight key causes for model failure. Our assessment of model performance uses a novel benchmarking system that scores a model’s predictive ability based on how well it is utilizing its driving information. On average, we found the models as a group display only moderate levels of performance.
Y. P. Wang, J. Jiang, B. Chen-Charpentier, F. B. Agusto, A. Hastings, F. Hoffman, M. Rasmussen, M. J. Smith, K. Todd-Brown, Y. Wang, X. Xu, and Y. Q. Luo
Biogeosciences, 13, 887–902, https://doi.org/10.5194/bg-13-887-2016, https://doi.org/10.5194/bg-13-887-2016, 2016
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Comparing two nonlinear microbial models, we found that,
in response to warming, soil C decreases in one model but can increase or decrease in the other model, and sensitivity of priming response to carbon input increases with soil T in one model but decreases in the other model
Significance: these differences in the responses can be used to discern which model is more realistic, which will improve our understanding of the significance of soil microbial processes in the terrestrial C cycle.
M. G. De Kauwe, S.-X. Zhou, B. E. Medlyn, A. J. Pitman, Y.-P. Wang, R. A. Duursma, and I. C. Prentice
Biogeosciences, 12, 7503–7518, https://doi.org/10.5194/bg-12-7503-2015, https://doi.org/10.5194/bg-12-7503-2015, 2015
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Future climate change has the potential to increase drought in many regions of the globe. Recent data syntheses show that drought sensitivity varies considerably among plants from different climate zones, but state-of-the-art models currently assume the same drought sensitivity for all vegetation. Our results indicate that models will over-estimate drought impacts in drier climates unless different sensitivity of vegetation to drought is taken into account.
J. Kala, M. G. De Kauwe, A. J. Pitman, R. Lorenz, B. E. Medlyn, Y.-P Wang, Y.-S Lin, and G. Abramowitz
Geosci. Model Dev., 8, 3877–3889, https://doi.org/10.5194/gmd-8-3877-2015, https://doi.org/10.5194/gmd-8-3877-2015, 2015
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We implement a new stomatal conductance scheme within a land surface model coupled to a global climate model. The new model differs from the default in that it allows model parameters to vary by the different plant functional types, derived from global synthesis of observations. We show that the new scheme results in improvements in the model climatology and improves existing biases in warm temperature extremes by up to 10-20% over the boreal forests during summer.
Y. Huang and S. Gerber
Biogeosciences, 12, 6405–6427, https://doi.org/10.5194/bg-12-6405-2015, https://doi.org/10.5194/bg-12-6405-2015, 2015
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The prediction of the greenhouse gas N2O from natural soils globally is sensitive to the representation of soil water. Factors that regulate nitrogen retention and nitrogen limitation, including fire and biological nitrogen fixation are further influencing the N2O gas production. Responses to warming and CO2 increase are strongly controlled by tropical soils. Therefore extrapolation of mostly extra-tropical field studies the globe warrants caution.
I. C. Prentice, X. Liang, B. E. Medlyn, and Y.-P. Wang
Atmos. Chem. Phys., 15, 5987–6005, https://doi.org/10.5194/acp-15-5987-2015, https://doi.org/10.5194/acp-15-5987-2015, 2015
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Land surface models (LSMs) describe how carbon and water fluxes react to environmental change. They are key component of climate models, yet they differ enormously. Many perform poorly, despite having many parameters. We outline a development strategy emphasizing robustness, reliability and realism, none of which is guaranteed by complexity alone. We propose multiple constraints, benchmarking and data assimilation, and representing unresolved processes stochastically, as tools in this endeavour.
C. Le Quéré, R. Moriarty, R. M. Andrew, G. P. Peters, P. Ciais, P. Friedlingstein, S. D. Jones, S. Sitch, P. Tans, A. Arneth, T. A. Boden, L. Bopp, Y. Bozec, J. G. Canadell, L. P. Chini, F. Chevallier, C. E. Cosca, I. Harris, M. Hoppema, R. A. Houghton, J. I. House, A. K. Jain, T. Johannessen, E. Kato, R. F. Keeling, V. Kitidis, K. Klein Goldewijk, C. Koven, C. S. Landa, P. Landschützer, A. Lenton, I. D. Lima, G. Marland, J. T. Mathis, N. Metzl, Y. Nojiri, A. Olsen, T. Ono, S. Peng, W. Peters, B. Pfeil, B. Poulter, M. R. Raupach, P. Regnier, C. Rödenbeck, S. Saito, J. E. Salisbury, U. Schuster, J. Schwinger, R. Séférian, J. Segschneider, T. Steinhoff, B. D. Stocker, A. J. Sutton, T. Takahashi, B. Tilbrook, G. R. van der Werf, N. Viovy, Y.-P. Wang, R. Wanninkhof, A. Wiltshire, and N. Zeng
Earth Syst. Sci. Data, 7, 47–85, https://doi.org/10.5194/essd-7-47-2015, https://doi.org/10.5194/essd-7-47-2015, 2015
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Carbon dioxide (CO2) emissions from human activities (burning fossil fuels and cement production, deforestation and other land-use change) are set to rise again in 2014.
This study (updated yearly) makes an accurate assessment of anthropogenic CO2 emissions and their redistribution between the atmosphere, ocean, and terrestrial biosphere in order to better understand the global carbon cycle, support the development of climate policies, and project future climate change.
M. G. De Kauwe, J. Kala, Y.-S. Lin, A. J. Pitman, B. E. Medlyn, R. A. Duursma, G. Abramowitz, Y.-P. Wang, and D. G. Miralles
Geosci. Model Dev., 8, 431–452, https://doi.org/10.5194/gmd-8-431-2015, https://doi.org/10.5194/gmd-8-431-2015, 2015
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Stomatal conductance affects the fluxes of carbon, energy and water between the vegetated land surface and the atmosphere. We test an implementation of an optimal stomatal conductance model within the CABLE land surface model (LSM). The new implementation resulted in a large reduction in the annual fluxes of transpiration across evergreen needleleaf, tundra and C4 grass regions. We conclude that optimisation theory can yield a tractable approach to predicting stomatal conductance in LSMs.
Y. P. Wang, B. C. Chen, W. R. Wieder, M. Leite, B. E. Medlyn, M. Rasmussen, M. J. Smith, F. B. Agusto, F. Hoffman, and Y. Q. Luo
Biogeosciences, 11, 1817–1831, https://doi.org/10.5194/bg-11-1817-2014, https://doi.org/10.5194/bg-11-1817-2014, 2014
B. Ringeval, S. Houweling, P. M. van Bodegom, R. Spahni, R. van Beek, F. Joos, and T. Röckmann
Biogeosciences, 11, 1519–1558, https://doi.org/10.5194/bg-11-1519-2014, https://doi.org/10.5194/bg-11-1519-2014, 2014
J.-F. Exbrayat, A. J. Pitman, Q. Zhang, G. Abramowitz, and Y.-P. Wang
Biogeosciences, 10, 7095–7108, https://doi.org/10.5194/bg-10-7095-2013, https://doi.org/10.5194/bg-10-7095-2013, 2013
Q. Zhang, A. J. Pitman, Y. P. Wang, Y. J. Dai, and P. J. Lawrence
Earth Syst. Dynam., 4, 333–345, https://doi.org/10.5194/esd-4-333-2013, https://doi.org/10.5194/esd-4-333-2013, 2013
Related subject area
Biogeochemistry: Soils
Modelling the effect of climate–substrate interactions on soil organic matter decomposition with the Jena Soil Model
Solubility characteristics of soil humic substances as a function of pH: mechanisms and biogeochemical perspectives
Exploring microscale heterogeneity as a driver of biogeochemical transformations and gas transport in peat
Dissolved organic matter fosters core mercury-methylating microbiomes for methylmercury production in paddy soils
A microbially driven and depth-explicit soil organic carbon model constrained by carbon isotopes to reduce parameter equifinality
Earth observation reveals reduced winter wheat growth and the importance of plant available water during drought
Plutonium concentrations link soil organic matter decline to wind erosion in ploughed soils of South Africa
A synthesis of Sphagnum litterbag experiments: initial leaching losses bias decomposition rate estimates
Effect of straw retention and mineral fertilization on P speciation and P-transformation microorganisms in water- extractable colloids of a Vertisol
A new approach to continuous monitoring of carbon use efficiency and biosynthesis in soil microbes from measurement of CO2 and O2
Validating laboratory insights into the drivers of soil rewetting respiration pulses with field measurements
Diverse organic carbon dynamics captured by radiocarbon analysis of distinct compound classes in a grassland soil
Effects of basalt, concrete fines, and steel slag on maize growth and heavy metal accumulation in an enhanced weathering experiment
The effects of land use on soil carbon stocks in the UK
Technical note: A validated correction method to quantify organic and inorganic carbon in soils using Rock-Eval® thermal analysis
Depth Effects of Long-term Organic Residue Application on Soil Organic Carbon Stocks in Central Kenya
Distinct changes in carbon, nitrogen, and phosphorus cycling in the litter layer across two contrasting forest-tundra ecotones
Vegetation patterns associated with nutrient availability and supply in high-elevation tropical Andean ecosystems
Technical note: An open-source, low-cost system for continuous monitoring of low nitrate concentrations in soil and open water
Long-term fertilization increases soil but not plant or microbial N in a Chihuahuan Desert grassland
Factors controlling spatiotemporal variability of soil carbon accumulation and stock estimates in a tidal salt marsh
Moisture and temperature effects on the radiocarbon signature of respired carbon dioxide to assess stability of soil carbon in the Tibetan Plateau
Non-mycorrhizal root-associated fungi increase soil C stocks and stability via diverse mechanisms
Nine years of warming and nitrogen addition in the Tibetan grassland promoted loss of soil organic carbon but did not alter the bulk change in chemical structure
Soil priming effects and involved microbial community along salt gradients
Adjustments to the Rock-Eval® thermal analysis for soil organic and inorganic carbon quantification
Ecosystem-specific patterns and drivers of global reactive iron mineral-associated organic carbon
Dark septate endophytic fungi associated with pioneer grass inhabiting volcanic deposits and their functions in promoting plant growth
Reviews and syntheses: Iron – a driver of nitrogen bioavailability in soils?
How well does ramped thermal oxidation quantify the age distribution of soil carbon? Assessing thermal stability of physically and chemically fractionated soil organic matter
Differential temperature sensitivity of intracellular metabolic processes and extracellular soil enzyme activities
Mapping soil organic carbon fractions for Australia, their stocks, and uncertainty
Technical note: The recovery rate of free particulate organic matter from soil samples is strongly affected by the method of density fractionation
Deforestation for agriculture leads to soil warming and enhanced litter decomposition in subarctic soils
Temperature sensitivity of soil organic carbon respiration along a forested elevation gradient in the Rwenzori Mountains, Uganda
The influence of elevated CO2 and soil depth on rhizosphere activity and nutrient availability in a mature Eucalyptus woodland
The paradox of assessing greenhouse gases from soils for nature-based solutions
Management-induced changes in soil organic carbon on global croplands
Pore network modeling as a new tool for determining gas diffusivity in peat
Temperature sensitivity of dark CO2 fixation in temperate forest soils
Effects of precipitation seasonality, irrigation, vegetation cycle and soil type on enhanced weathering – modeling of cropland case studies across four sites
Stable isotope profiles of soil organic carbon in forested and grassland landscapes in the Lake Alaotra basin (Madagascar): insights in past vegetation changes
Reviews and syntheses: The promise of big diverse soil data, moving current practices towards future potential
Dynamics of rare earth elements and associated major and trace elements during Douglas-fir (Pseudotsuga menziesii) and European beech (Fagus sylvatica L.) litter degradation
To what extent can soil moisture and soil Cu contamination stresses affect nitrous species emissions? Estimation through calibration of a nitrification–denitrification model
Carbon, nitrogen, and phosphorus stoichiometry of organic matter in Swedish forest soils and its relationship with climate, tree species, and soil texture
Soil geochemistry as a driver of soil organic matter composition: insights from a soil chronosequence
Leaching of inorganic and organic phosphorus and nitrogen in contrasting beech forest soils – seasonal patterns and effects of fertilization
Age and chemistry of dissolved organic carbon reveal enhanced leaching of ancient labile carbon at the permafrost thaw zone
Soil organic carbon stabilization mechanisms and temperature sensitivity in old terraced soils
Marleen Pallandt, Marion Schrumpf, Holger Lange, Markus Reichstein, Lin Yu, and Bernhard Ahrens
Biogeosciences, 22, 1907–1928, https://doi.org/10.5194/bg-22-1907-2025, https://doi.org/10.5194/bg-22-1907-2025, 2025
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As soils warm due to climate change, soil organic carbon (SOC) decomposes faster due to increased microbial activity, given sufficient available moisture. We modelled the microbial decomposition of plant litter and residue at different depths and found that deep soil layers are more sensitive than topsoils. Warming causes SOC loss, but its extent depends on the litter type and its temperature sensitivity, which can either counteract or amplify losses. Droughts may also counteract warming-induced SOC losses.
Xuemei Yang, Jie Zhang, Khan M. G. Mostofa, Mohammad Mohinuzzaman, H. Henry Teng, Nicola Senesi, Giorgio S. Senesi, Jie Yuan, Yu Liu, Si-Liang Li, Xiaodong Li, Baoli Wang, and Cong-Qiang Liu
Biogeosciences, 22, 1745–1765, https://doi.org/10.5194/bg-22-1745-2025, https://doi.org/10.5194/bg-22-1745-2025, 2025
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The solubility characteristics of soil humic acids (HAs), fulvic acids (FAs), and protein-like substances (PLSs) at varying pH levels remain unclear. The key findings include the following: HA solubility increases with increasing pH and decreases with decreasing pH; HApH6 and HApH1 contribute to 39.1–49.2% and 3.1–24.1% of dissolved organic carbon, respectively; and HApH2, FA, and PLSs are highly soluble at acidic pHs and are transported by ambient water. These issues are crucial for sustainable soil management.
Lukas Kohl, Petri Kiuru, Marjo Palviainen, Maarit Raivonen, Markku Koskinen, Mari Pihlatie, and Annamari Laurén
Biogeosciences, 22, 1711–1727, https://doi.org/10.5194/bg-22-1711-2025, https://doi.org/10.5194/bg-22-1711-2025, 2025
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We present an assay to illuminate heterogeneity in biogeochemical transformations within peat samples. For this, we injected isotope-labeled acetate into peat cores and monitored the release of label-derived gases, which we compared to microtomography images. The fraction of label converted to CO2 and the rapidness of this conversion were linked to injection depth and air-filled porosity.
Qiang Pu, Bo Meng, Jen-How Huang, Kun Zhang, Jiang Liu, Yurong Liu, Mahmoud A. Abdelhafiz, and Xinbin Feng
Biogeosciences, 22, 1543–1556, https://doi.org/10.5194/bg-22-1543-2025, https://doi.org/10.5194/bg-22-1543-2025, 2025
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This study examines the effect of dissolved organic matter (DOM) on microbial mercury (Hg) methylation in paddy soils. It uncovers that DOM regulates Hg methylation mainly through altering core Hg-methylating microbiome composition and boosting the growth of core Hg-methylating microorganisms. The study highlights that in the regulation of methylmercury formation in paddy soils, more attention should be paid to changes in DOM concentration and composition.
Marijn Van de Broek, Gerard Govers, Marion Schrumpf, and Johan Six
Biogeosciences, 22, 1427–1446, https://doi.org/10.5194/bg-22-1427-2025, https://doi.org/10.5194/bg-22-1427-2025, 2025
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Soil organic carbon models are used to predict how soils affect the concentration of CO2 in the atmosphere. We show that equifinality – the phenomenon that different parameter values lead to correct overall model outputs, albeit with a different model behaviour – is an important source of model uncertainty. Our results imply that adding more complexity to soil organic carbon models is unlikely to lead to better predictions as long as more data to constrain model parameters are not available.
Hanna Sjulgård, Lukas Valentin Graf, Tino Colombi, Juliane Hirte, Thomas Keller, and Helge Aasen
Biogeosciences, 22, 1341–1354, https://doi.org/10.5194/bg-22-1341-2025, https://doi.org/10.5194/bg-22-1341-2025, 2025
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Our study showed that stress-related crop response to changing environmental conditions can be detected by monitoring crops using satellite images at the landscape level. This could be useful for farmers to identify when stresses occur. Our results also suggest that satellite imagery can be used to discover soil impacts on crop development at farm fields. The inclusion of soil properties in satellite image analyses could further improve the accuracy of the prediction of drought stress on crops.
Joel Mohren, Hendrik Wiesel, Wulf Amelung, L. Keith Fifield, Alexandra Sandhage-Hofmann, Erik Strub, Steven A. Binnie, Stefan Heinze, Elmarie Kotze, Chris Du Preez, Stephen G. Tims, and Tibor J. Dunai
Biogeosciences, 22, 1077–1094, https://doi.org/10.5194/bg-22-1077-2025, https://doi.org/10.5194/bg-22-1077-2025, 2025
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We measured concentrations of nuclear fallout in soil samples taken from arable land in South Africa. We find that during the second half of the 20th century, the data strongly correlate with the organic matter content of the soils. The finding implies that wind erosion strongly influenced the loss of organic matter in the soils we investigated. Furthermore, the exponential decline of fallout concentrations and organic matter content over time peaks shortly after native grassland is ploughed.
Henning Teickner, Edzer Pebesma, and Klaus-Holger Knorr
Biogeosciences, 22, 417–433, https://doi.org/10.5194/bg-22-417-2025, https://doi.org/10.5194/bg-22-417-2025, 2025
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Decomposition rates for Sphagnum mosses, the main peat-forming plants in northern peatlands, are often derived from litterbag experiments. Here, we estimate initial leaching losses from available Sphagnum litterbag experiments and analyze how decomposition rates are biased when initial leaching losses are ignored. Our analyses indicate that initial leaching losses range between 3 to 18 mass-% and that this may result in overestimated mass losses when extrapolated to several decades.
Shanshan Bai, Yifei Ge, Dongtan Yao, Yifan Wang, Jinfang Tan, Shuai Zhang, Yutao Peng, and Xiaoqian Jiang
Biogeosciences, 22, 135–151, https://doi.org/10.5194/bg-22-135-2025, https://doi.org/10.5194/bg-22-135-2025, 2025
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Mineral fertilization led to increases in total P, available P, high-activity inorganic P fractions, and organic P but reduced the abundance of P-cycling genes by decreasing soil pH and increasing P in bulk soil. Straw retention enhanced organic carbon, total P, and available P concentrations in water-extractable colloids (WECs). Abundances of the phoD gene and phoD-harboring Proteobacteria in WECs were elevated under straw retention, suggesting an increase in P-mineralization capacity.
Kyle E. Smart, Daniel O. Breecker, Christopher B. Blackwood, and Timothy M. Gallagher
Biogeosciences, 22, 87–101, https://doi.org/10.5194/bg-22-87-2025, https://doi.org/10.5194/bg-22-87-2025, 2025
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When microbes consume carbon within soils, it is important to know how much carbon is respired and lost as carbon dioxide versus how much is used to make new biomass. We used a new approach of monitoring carbon dioxide and oxygen to track the fate of consumed carbon during a series of laboratory experiments where sugar was added to moistened soil. Our approach allowed us to estimate how much sugar was converted to dead microbial biomass, which is more likely to be preserved in soils.
Xiankun Li, Marleen Pallandt, Dilip Naidu, Johannes Rousk, Gustaf Hugelius, and Stefano Manzoni
EGUsphere, https://doi.org/10.5194/egusphere-2024-3324, https://doi.org/10.5194/egusphere-2024-3324, 2024
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While laboratory studies have identified many drivers and their effects on the carbon emission pulse after rewetting of dry soils, a validation with field data is still missing. Here, we show that the carbon emission pulse in the laboratory and in the field increases with soil organic carbon and temperature, but their trends with pre-rewetting dryness and moisture increment at rewetting differ. We conclude that the laboratory findings can be partially validated.
Katherine E. Grant, Marisa N. Repasch, Kari M. Finstad, Julia D. Kerr, Maxwell Marple, Christopher J. Larson, Taylor A. B. Broek, Jennifer Pett-Ridge, and Karis J. McFarlane
Biogeosciences, 21, 4395–4411, https://doi.org/10.5194/bg-21-4395-2024, https://doi.org/10.5194/bg-21-4395-2024, 2024
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Soils store organic carbon composed of multiple compounds from plants and microbes for different lengths of time. To understand how soils store these different carbon types, we measure the time each carbon fraction is in a grassland soil profile. Our results show that the length of time each individual soil fraction is in our soil changes. Our approach allows a detailed look at the different components in soils. This study can help improve our understanding of soil dynamics.
Jet Rijnders, Arthur Vienne, and Sara Vicca
EGUsphere, https://doi.org/10.5194/egusphere-2024-3022, https://doi.org/10.5194/egusphere-2024-3022, 2024
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A mesocosm experiment was set-up to investigate how maize responds to basalt, concrete fines and steel slags application, using a dose-response approach. Biomass increased with basalt application, but did not change with concrete fines or steel slags, except for increased tassel biomass. Mg, Ca and Si generally increased in the crops, while heavy metal concentrations remained unaffected or even decreased in the plants. Overall, crops were positively affected by application of silicate materials.
Peter Levy, Laura Bentley, Peter Danks, Bridget Emmett, Angus Garbutt, Stephen Heming, Peter Henrys, Aidan Keith, Inma Lebron, Niall McNamara, Richard Pywell, John Redhead, David Robinson, and Alexander Wickenden
Biogeosciences, 21, 4301–4315, https://doi.org/10.5194/bg-21-4301-2024, https://doi.org/10.5194/bg-21-4301-2024, 2024
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We collated a large data set (15 790 soil cores) on soil carbon stock in different land uses. Soil carbon stocks were highest in woodlands and lowest in croplands. The variability in the effects was large. This has important implications for agri-environment schemes seeking to sequester carbon in the soil by altering land use because the effect of a given intervention is very hard to verify.
Marija Stojanova, Pierre Arbelet, François Baudin, Nicolas Bouton, Giovanni Caria, Lorenza Pacini, Nicolas Proix, Edouard Quibel, Achille Thin, and Pierre Barré
Biogeosciences, 21, 4229–4237, https://doi.org/10.5194/bg-21-4229-2024, https://doi.org/10.5194/bg-21-4229-2024, 2024
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Because of its importance for climate regulation and soil health, many studies focus on carbon dynamics in soils. However, quantifying organic and inorganic carbon remains an issue in carbonated soils. In this technical note, we propose a validated correction method to quantify organic and inorganic carbon in soils using Rock-Eval® thermal analysis. With this correction, the Rock-Eval® method has the potential to become the standard method for quantifying carbon in carbonate soils.
Claude Raoul Müller, Johan Six, Daniel Mugendi Njiru, Bernard Vanlauwe, and Marijn Van de Broek
EGUsphere, https://doi.org/10.5194/egusphere-2024-2796, https://doi.org/10.5194/egusphere-2024-2796, 2024
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We studied how different organic and inorganic nutrient inputs affect soil organic carbon (SOC) down to 70 cm in Kenya. After 19 years, all organic treatments increased SOC stocks as compared to the control, but mineral nitrogen had no significant effect. Manure was the organic treatment that significantly increased SOC the deepest as its effect could be observed down to 60 cm. Manure was the best strategy to limit SOC loss in croplands and maintain soil quality after deforestation.
Frank Hagedorn, Joesphine Imboden, Pavel Moiseev, Decai Gao, Emmanuel Frossard, Daniel Christen, Konstantin Gavazov, and Jasmin Fetzer
EGUsphere, https://doi.org/10.5194/egusphere-2024-2622, https://doi.org/10.5194/egusphere-2024-2622, 2024
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At treeline, plant species change abruptly from low stature plants in tundra to trees in forests. Our study documents that from tundra towards forest, the litter layer gets strongly enriched in nutrients. We show that these litter quality changes alter nutrient processing by soil microbes and increase the nutrient release during decomposition in forest than in tundra. The associated improvement of nutrient availability in the forest potentially stimulates tree growth and treeline shifts.
Armando Molina, Veerle Vanacker, Oliver Chadwick, Santiago Zhiminaicela, Marife Corre, and Edzo Veldkamp
Biogeosciences, 21, 3075–3091, https://doi.org/10.5194/bg-21-3075-2024, https://doi.org/10.5194/bg-21-3075-2024, 2024
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The tropical Andes contains unique landscapes where forest patches are surrounded by tussock grasses and cushion-forming plants. The aboveground vegetation composition informs us about belowground nutrient availability: patterns in plant-available nutrients resulted from strong biocycling of cations and removal of soil nutrients by plant uptake or leaching. Future changes in vegetation distribution will affect soil water and solute fluxes and the aquatic ecology of Andean rivers and lakes.
Sahiti Bulusu, Cristina Prieto García, Helen E. Dahlke, and Elad Levintal
Biogeosciences, 21, 3007–3013, https://doi.org/10.5194/bg-21-3007-2024, https://doi.org/10.5194/bg-21-3007-2024, 2024
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Do-it-yourself hardware is a new way to improve measurement resolution. We present a low-cost, automated system for field measurements of low nitrate concentrations in soil porewater and open water bodies. All data hardware components cost USD 1100, which is much cheaper than other available commercial solutions. We provide the complete building guide to reduce technical barriers, which we hope will allow easier reproducibility and set up new soil and environmental monitoring applications.
Violeta Mendoza-Martinez, Scott L. Collins, and Jennie R. McLaren
Biogeosciences, 21, 2655–2667, https://doi.org/10.5194/bg-21-2655-2024, https://doi.org/10.5194/bg-21-2655-2024, 2024
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We examine the impacts of multi-decadal nitrogen additions on a dryland ecosystem N budget, including the soil, microbial, and plant N pools. After 26 years, there appears to be little impact on the soil microbial or plant community and only minimal increases in N pools within the soil. While perhaps encouraging from a conservation standpoint, we calculate that greater than 95 % of the nitrogen added to the system is not retained and is instead either lost deeper in the soil or emitted as gas.
Sean Fettrow, Andrew Wozniak, Holly A. Michael, and Angelia L. Seyfferth
Biogeosciences, 21, 2367–2384, https://doi.org/10.5194/bg-21-2367-2024, https://doi.org/10.5194/bg-21-2367-2024, 2024
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Salt marshes play a big role in global carbon (C) storage, and C stock estimates are used to predict future changes. However, spatial and temporal gradients in C burial rates over the landscape exist due to variations in water inundation, dominant plant species and stage of growth, and tidal action. We quantified soil C concentrations in soil cores across time and space beside several porewater biogeochemical variables and discussed the controls on variability in soil C in salt marsh ecosystems.
Andrés Tangarife-Escobar, Georg Guggenberger, Xiaojuan Feng, Guohua Dai, Carolina Urbina-Malo, Mina Azizi-Rad, and Carlos A. Sierra
Biogeosciences, 21, 1277–1299, https://doi.org/10.5194/bg-21-1277-2024, https://doi.org/10.5194/bg-21-1277-2024, 2024
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Soil organic matter stability depends on future temperature and precipitation scenarios. We used radiocarbon (14C) data and model predictions to understand how the transit time of carbon varies under environmental change in grasslands and peatlands. Soil moisture affected the Δ14C of peatlands, while temperature did not have any influence. Our models show the correspondence between Δ14C and transit time and could allow understanding future interactions between terrestrial and atmospheric carbon
Emiko K. Stuart, Laura Castañeda-Gómez, Wolfram Buss, Jeff R. Powell, and Yolima Carrillo
Biogeosciences, 21, 1037–1059, https://doi.org/10.5194/bg-21-1037-2024, https://doi.org/10.5194/bg-21-1037-2024, 2024
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We inoculated wheat plants with various types of fungi whose impacts on soil carbon are poorly understood. After several months of growth, we examined both their impacts on soil carbon and the underlying mechanisms using multiple methods. Overall the fungi benefitted the storage of carbon in soil, mainly by improving the stability of pre-existing carbon, but several pathways were involved. This study demonstrates their importance for soil carbon storage and, therefore, climate change mitigation.
Huimin Sun, Michael W. I. Schmidt, Jintao Li, Jinquan Li, Xiang Liu, Nicholas O. E. Ofiti, Shurong Zhou, and Ming Nie
Biogeosciences, 21, 575–589, https://doi.org/10.5194/bg-21-575-2024, https://doi.org/10.5194/bg-21-575-2024, 2024
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A soil organic carbon (SOC) molecular structure suggested that the easily decomposable and stabilized SOC is similarly affected after 9-year warming and N treatments despite large changes in SOC stocks. Given the long residence time of some SOC, the similar loss of all measurable chemical forms of SOC under global change treatments could have important climate consequences.
Haoli Zhang, Doudou Chang, Zhifeng Zhu, Chunmei Meng, and Kaiyong Wang
Biogeosciences, 21, 1–11, https://doi.org/10.5194/bg-21-1-2024, https://doi.org/10.5194/bg-21-1-2024, 2024
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Soil salinity mediates microorganisms and soil processes like soil organic carbon (SOC) cycling. We observed that negative priming effects at the early stages might be due to the preferential utilization of cottonseed meal. The positive priming that followed decreased with the increase in salinity.
Joséphine Hazera, David Sebag, Isabelle Kowalewski, Eric Verrecchia, Herman Ravelojaona, and Tiphaine Chevallier
Biogeosciences, 20, 5229–5242, https://doi.org/10.5194/bg-20-5229-2023, https://doi.org/10.5194/bg-20-5229-2023, 2023
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This study adapts the Rock-Eval® protocol to quantify soil organic carbon (SOC) and soil inorganic carbon (SIC) on a non-pretreated soil aliquot. The standard protocol properly estimates SOC contents once the TOC parameter is corrected. However, it cannot complete the thermal breakdown of SIC amounts > 4 mg, leading to an underestimation of high SIC contents by the MinC parameter, even after correcting for this. Thus, the final oxidation isotherm is extended to 7 min to quantify any SIC amount.
Bo Zhao, Amin Dou, Zhiwei Zhang, Zhenyu Chen, Wenbo Sun, Yanli Feng, Xiaojuan Wang, and Qiang Wang
Biogeosciences, 20, 4761–4774, https://doi.org/10.5194/bg-20-4761-2023, https://doi.org/10.5194/bg-20-4761-2023, 2023
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This study provided a comprehensive analysis of the spatial variability and determinants of Fe-bound organic carbon (Fe-OC) among terrestrial, wetland, and marine ecosystems and its governing factors globally. We illustrated that reactive Fe was not only an important sequestration mechanism for OC in terrestrial ecosystems but also an effective “rusty sink” of OC preservation in wetland and marine ecosystems, i.e., a key factor for long-term OC storage in global ecosystems.
Han Sun, Tomoyasu Nishizawa, Hiroyuki Ohta, and Kazuhiko Narisawa
Biogeosciences, 20, 4737–4749, https://doi.org/10.5194/bg-20-4737-2023, https://doi.org/10.5194/bg-20-4737-2023, 2023
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In this research, we assessed the diversity and function of the dark septate endophytic (DSE) fungi community associated with Miscanthus condensatus root in volcanic ecosystems. Both metabarcoding and isolation were adopted in this study. We further validated effects on plant growth by inoculation of some core DSE isolates. This study helps improve our understanding of the role of Miscanthus condensatus-associated DSE fungi during the restoration of post-volcanic ecosystems.
Imane Slimani, Xia Zhu-Barker, Patricia Lazicki, and William Horwath
Biogeosciences, 20, 3873–3894, https://doi.org/10.5194/bg-20-3873-2023, https://doi.org/10.5194/bg-20-3873-2023, 2023
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There is a strong link between nitrogen availability and iron minerals in soils. These minerals have multiple outcomes for nitrogen availability depending on soil conditions and properties. For example, iron can limit microbial degradation of nitrogen in aerated soils but has opposing outcomes in non-aerated soils. This paper focuses on the multiple ways iron can affect nitrogen bioavailability in soils.
Shane W. Stoner, Marion Schrumpf, Alison Hoyt, Carlos A. Sierra, Sebastian Doetterl, Valier Galy, and Susan Trumbore
Biogeosciences, 20, 3151–3163, https://doi.org/10.5194/bg-20-3151-2023, https://doi.org/10.5194/bg-20-3151-2023, 2023
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Soils store more carbon (C) than any other terrestrial C reservoir, but the processes that control how much C stays in soil, and for how long, are very complex. Here, we used a recent method that involves heating soil in the lab to measure the range of C ages in soil. We found that most C in soil is decades to centuries old, while some stays for much shorter times (days to months), and some is thousands of years old. Such detail helps us to estimate how soil C may react to changing climate.
Adetunji Alex Adekanmbi, Laurence Dale, Liz Shaw, and Tom Sizmur
Biogeosciences, 20, 2207–2219, https://doi.org/10.5194/bg-20-2207-2023, https://doi.org/10.5194/bg-20-2207-2023, 2023
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The decomposition of soil organic matter and flux of carbon dioxide are expected to increase as temperatures rise. However, soil organic matter decomposition is a two-step process whereby large molecules are first broken down outside microbial cells and then respired within microbial cells. We show here that these two steps are not equally sensitive to increases in soil temperature and that global warming may cause a shift in the rate-limiting step from outside to inside the microbial cell.
Mercedes Román Dobarco, Alexandre M. J-C. Wadoux, Brendan Malone, Budiman Minasny, Alex B. McBratney, and Ross Searle
Biogeosciences, 20, 1559–1586, https://doi.org/10.5194/bg-20-1559-2023, https://doi.org/10.5194/bg-20-1559-2023, 2023
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Soil organic carbon (SOC) is of a heterogeneous nature and varies in chemistry, stabilisation mechanisms, and persistence in soil. In this study we mapped the stocks of SOC fractions with different characteristics and turnover rates (presumably PyOC >= MAOC > POC) across Australia, combining spectroscopy and digital soil mapping. The SOC stocks (0–30 cm) were estimated as 13 Pg MAOC, 2 Pg POC, and 5 Pg PyOC.
Frederick Büks
Biogeosciences, 20, 1529–1535, https://doi.org/10.5194/bg-20-1529-2023, https://doi.org/10.5194/bg-20-1529-2023, 2023
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Ultrasonication with density fractionation of soils is a commonly used method to separate soil organic matter pools, which is, e.g., important to calculate carbon turnover in landscapes. It is shown that the approach that merges soil and dense solution without mixing has a low recovery rate and causes co-extraction of parts of the retained labile pool along with the intermediate pool. An alternative method with high recovery rates and no cross-contamination was recommended.
Tino Peplau, Christopher Poeplau, Edward Gregorich, and Julia Schroeder
Biogeosciences, 20, 1063–1074, https://doi.org/10.5194/bg-20-1063-2023, https://doi.org/10.5194/bg-20-1063-2023, 2023
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We buried tea bags and temperature loggers in a paired-plot design in soils under forest and agricultural land and retrieved them after 2 years to quantify the effect of land-use change on soil temperature and litter decomposition in subarctic agricultural systems. We could show that agricultural soils were on average 2 °C warmer than forests and that litter decomposition was enhanced. The results imply that deforestation amplifies effects of climate change on soil organic matter dynamics.
Joseph Okello, Marijn Bauters, Hans Verbeeck, Samuel Bodé, John Kasenene, Astrid Françoys, Till Engelhardt, Klaus Butterbach-Bahl, Ralf Kiese, and Pascal Boeckx
Biogeosciences, 20, 719–735, https://doi.org/10.5194/bg-20-719-2023, https://doi.org/10.5194/bg-20-719-2023, 2023
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The increase in global and regional temperatures has the potential to drive accelerated soil organic carbon losses in tropical forests. We simulated climate warming by translocating intact soil cores from higher to lower elevations. The results revealed increasing temperature sensitivity and decreasing losses of soil organic carbon with increasing elevation. Our results suggest that climate warming may trigger enhanced losses of soil organic carbon from tropical montane forests.
Johanna Pihlblad, Louise C. Andresen, Catriona A. Macdonald, David S. Ellsworth, and Yolima Carrillo
Biogeosciences, 20, 505–521, https://doi.org/10.5194/bg-20-505-2023, https://doi.org/10.5194/bg-20-505-2023, 2023
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Elevated CO2 in the atmosphere increases forest biomass productivity when growth is not limited by soil nutrients. This study explores how mature trees stimulate soil availability of nitrogen and phosphorus with free-air carbon dioxide enrichment after 5 years of fumigation. We found that both nutrient availability and processes feeding available pools increased in the rhizosphere, and phosphorus increased at depth. This appears to not be by decomposition but by faster recycling of nutrients.
Rodrigo Vargas and Van Huong Le
Biogeosciences, 20, 15–26, https://doi.org/10.5194/bg-20-15-2023, https://doi.org/10.5194/bg-20-15-2023, 2023
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Quantifying the role of soils in nature-based solutions requires accurate estimates of soil greenhouse gas (GHG) fluxes. We suggest that multiple GHG fluxes should not be simultaneously measured at a few fixed time intervals, but an optimized sampling approach can reduce bias and uncertainty. Our results have implications for assessing GHG fluxes from soils and a better understanding of the role of soils in nature-based solutions.
Kristine Karstens, Benjamin Leon Bodirsky, Jan Philipp Dietrich, Marta Dondini, Jens Heinke, Matthias Kuhnert, Christoph Müller, Susanne Rolinski, Pete Smith, Isabelle Weindl, Hermann Lotze-Campen, and Alexander Popp
Biogeosciences, 19, 5125–5149, https://doi.org/10.5194/bg-19-5125-2022, https://doi.org/10.5194/bg-19-5125-2022, 2022
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Soil organic carbon (SOC) has been depleted by anthropogenic land cover change and agricultural management. While SOC models often simulate detailed biochemical processes, the management decisions are still little investigated at the global scale. We estimate that soils have lost around 26 GtC relative to a counterfactual natural state in 1975. Yet, since 1975, SOC has been increasing again by 4 GtC due to a higher productivity, recycling of crop residues and manure, and no-tillage practices.
Petri Kiuru, Marjo Palviainen, Arianna Marchionne, Tiia Grönholm, Maarit Raivonen, Lukas Kohl, and Annamari Laurén
Biogeosciences, 19, 5041–5058, https://doi.org/10.5194/bg-19-5041-2022, https://doi.org/10.5194/bg-19-5041-2022, 2022
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Peatlands are large carbon stocks. Emissions of carbon dioxide and methane from peatlands may increase due to changes in management and climate. We studied the variation in the gas diffusivity of peat with depth using pore network simulations and laboratory experiments. Gas diffusivity was found to be lower in deeper peat with smaller pores and lower pore connectivity. However, gas diffusivity was not extremely low in wet conditions, which may reflect the distinctive structure of peat.
Rachael Akinyede, Martin Taubert, Marion Schrumpf, Susan Trumbore, and Kirsten Küsel
Biogeosciences, 19, 4011–4028, https://doi.org/10.5194/bg-19-4011-2022, https://doi.org/10.5194/bg-19-4011-2022, 2022
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Soils will likely become warmer in the future, and this can increase the release of carbon dioxide (CO2) into the atmosphere. As microbes can take up soil CO2 and prevent further escape into the atmosphere, this study compares the rate of uptake and release of CO2 at two different temperatures. With warming, the rate of CO2 uptake increases less than the rate of release, indicating that the capacity to modulate soil CO2 release into the atmosphere will decrease under future warming.
Giuseppe Cipolla, Salvatore Calabrese, Amilcare Porporato, and Leonardo V. Noto
Biogeosciences, 19, 3877–3896, https://doi.org/10.5194/bg-19-3877-2022, https://doi.org/10.5194/bg-19-3877-2022, 2022
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Enhanced weathering (EW) is a promising strategy for carbon sequestration. Since models may help to characterize field EW, the present work applies a hydro-biogeochemical model to four case studies characterized by different rainfall seasonality, vegetation and soil type. Rainfall seasonality strongly affects EW dynamics, but low carbon sequestration suggests that an in-depth analysis at the global scale is required to see if EW may be effective to mitigate climate change.
Vao Fenotiana Razanamahandry, Marjolein Dewaele, Gerard Govers, Liesa Brosens, Benjamin Campforts, Liesbet Jacobs, Tantely Razafimbelo, Tovonarivo Rafolisy, and Steven Bouillon
Biogeosciences, 19, 3825–3841, https://doi.org/10.5194/bg-19-3825-2022, https://doi.org/10.5194/bg-19-3825-2022, 2022
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In order to shed light on possible past vegetation shifts in the Central Highlands of Madagascar, we measured stable isotope ratios of organic carbon in soil profiles along both forested and grassland hillslope transects in the Lake Alaotra region. Our results show that the landscape of this region was more forested in the past: soils in the C4-dominated grasslands contained a substantial fraction of C3-derived carbon, increasing with depth.
Katherine E. O. Todd-Brown, Rose Z. Abramoff, Jeffrey Beem-Miller, Hava K. Blair, Stevan Earl, Kristen J. Frederick, Daniel R. Fuka, Mario Guevara Santamaria, Jennifer W. Harden, Katherine Heckman, Lillian J. Heran, James R. Holmquist, Alison M. Hoyt, David H. Klinges, David S. LeBauer, Avni Malhotra, Shelby C. McClelland, Lucas E. Nave, Katherine S. Rocci, Sean M. Schaeffer, Shane Stoner, Natasja van Gestel, Sophie F. von Fromm, and Marisa L. Younger
Biogeosciences, 19, 3505–3522, https://doi.org/10.5194/bg-19-3505-2022, https://doi.org/10.5194/bg-19-3505-2022, 2022
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Research data are becoming increasingly available online with tantalizing possibilities for reanalysis. However harmonizing data from different sources remains challenging. Using the soils community as an example, we walked through the various strategies that researchers currently use to integrate datasets for reanalysis. We find that manual data transcription is still extremely common and that there is a critical need for community-supported informatics tools like vocabularies and ontologies.
Alessandro Montemagno, Christophe Hissler, Victor Bense, Adriaan J. Teuling, Johanna Ziebel, and Laurent Pfister
Biogeosciences, 19, 3111–3129, https://doi.org/10.5194/bg-19-3111-2022, https://doi.org/10.5194/bg-19-3111-2022, 2022
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We investigated the biogeochemical processes that dominate the release and retention of elements (nutrients and potentially toxic elements) during litter degradation. Our results show that toxic elements are retained in the litter, while nutrients are released in solution during the first stages of degradation. This seems linked to the capability of trees to distribute the elements between degradation-resistant and non-degradation-resistant compounds of leaves according to their chemical nature.
Laura Sereni, Bertrand Guenet, Charlotte Blasi, Olivier Crouzet, Jean-Christophe Lata, and Isabelle Lamy
Biogeosciences, 19, 2953–2968, https://doi.org/10.5194/bg-19-2953-2022, https://doi.org/10.5194/bg-19-2953-2022, 2022
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This study focused on the modellisation of two important drivers of soil greenhouse gas emissions: soil contamination and soil moisture change. The aim was to include a Cu function in the soil biogeochemical model DNDC for different soil moisture conditions and then to estimate variation in N2O, NO2 or NOx emissions. Our results show a larger effect of Cu on N2 and N2O emissions than on the other nitrogen species and a higher effect for the soils incubated under constant constant moisture.
Marie Spohn and Johan Stendahl
Biogeosciences, 19, 2171–2186, https://doi.org/10.5194/bg-19-2171-2022, https://doi.org/10.5194/bg-19-2171-2022, 2022
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We explored the ratios of carbon (C), nitrogen (N), and phosphorus (P) of organic matter in Swedish forest soils. The N : P ratio of the organic layer was most strongly related to the mean annual temperature, while the C : N ratios of the organic layer and mineral soil were strongly related to tree species even in the subsoil. The organic P concentration in the mineral soil was strongly affected by soil texture, which diminished the effect of tree species on the C to organic P (C : OP) ratio.
Moritz Mainka, Laura Summerauer, Daniel Wasner, Gina Garland, Marco Griepentrog, Asmeret Asefaw Berhe, and Sebastian Doetterl
Biogeosciences, 19, 1675–1689, https://doi.org/10.5194/bg-19-1675-2022, https://doi.org/10.5194/bg-19-1675-2022, 2022
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The largest share of terrestrial carbon is stored in soils, making them highly relevant as regards global change. Yet, the mechanisms governing soil carbon stabilization are not well understood. The present study contributes to a better understanding of these processes. We show that qualitative changes in soil organic matter (SOM) co-vary with alterations of the soil matrix following soil weathering. Hence, the type of SOM that is stabilized in soils might change as soils develop.
Jasmin Fetzer, Emmanuel Frossard, Klaus Kaiser, and Frank Hagedorn
Biogeosciences, 19, 1527–1546, https://doi.org/10.5194/bg-19-1527-2022, https://doi.org/10.5194/bg-19-1527-2022, 2022
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As leaching is a major pathway of nitrogen and phosphorus loss in forest soils, we investigated several potential drivers in two contrasting beech forests. The composition of leachates, obtained by zero-tension lysimeters, varied by season, and climatic extremes influenced the magnitude of leaching. Effects of nitrogen and phosphorus fertilization varied with soil nutrient status and sorption properties, and leaching from the low-nutrient soil was more sensitive to environmental factors.
Karis J. McFarlane, Heather M. Throckmorton, Jeffrey M. Heikoop, Brent D. Newman, Alexandra L. Hedgpeth, Marisa N. Repasch, Thomas P. Guilderson, and Cathy J. Wilson
Biogeosciences, 19, 1211–1223, https://doi.org/10.5194/bg-19-1211-2022, https://doi.org/10.5194/bg-19-1211-2022, 2022
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Planetary warming is increasing seasonal thaw of permafrost, making this extensive old carbon stock vulnerable. In northern Alaska, we found more and older dissolved organic carbon in small drainages later in summer as more permafrost was exposed by deepening thaw. Younger and older carbon did not differ in chemical indicators related to biological lability suggesting this carbon can cycle through aquatic systems and contribute to greenhouse gas emissions as warming increases permafrost thaw.
Pengzhi Zhao, Daniel Joseph Fallu, Sara Cucchiaro, Paolo Tarolli, Clive Waddington, David Cockcroft, Lisa Snape, Andreas Lang, Sebastian Doetterl, Antony G. Brown, and Kristof Van Oost
Biogeosciences, 18, 6301–6312, https://doi.org/10.5194/bg-18-6301-2021, https://doi.org/10.5194/bg-18-6301-2021, 2021
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We investigate the factors controlling the soil organic carbon (SOC) stability and temperature sensitivity of abandoned prehistoric agricultural terrace soils. Results suggest that the burial of former topsoil due to terracing provided an SOC stabilization mechanism. Both the soil C : N ratio and SOC mineral protection regulate soil SOC temperature sensitivity. However, which mechanism predominantly controls SOC temperature sensitivity depends on the age of the buried terrace soils.
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Short summary
We identified total soil P concentration as the most important predictor of all soil P pool concentrations, except for primary mineral P concentration, which is primarily controlled by soil pH and only secondarily by total soil P concentration. We predicted soil P pools’ distributions in natural systems, which can inform assessments of the role of natural P availability for ecosystem productivity, climate change mitigation, and the functioning of the Earth system.
We identified total soil P concentration as the most important predictor of all soil P pool...
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