Articles | Volume 14, issue 4
https://doi.org/10.5194/bg-14-817-2017
© Author(s) 2017. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
https://doi.org/10.5194/bg-14-817-2017
© Author(s) 2017. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
Research article
| 
24 Feb 2017
Research article |
| 24 Feb 2017
Coral mortality induced by the 2015–2016 El-Niño in Indonesia: the effect of rapid sea level fall
Eghbert Elvan Ampou
UMR9220 ENTROPIE, Institut de Recherche pour le Développement, Université de la Réunion, CNRS, B.P.A5, 98848, Noumea, New Caledonia
Institute for Marine Research and Observation, SEACORM/INDESO center, Jl. Baru Perancak, Negara-Jembrana, Bali 82251, Indonesia
Laboratoire d'Etudes en Géophysique et Océanographie Spatiales, Université de Toulouse, CNRS, IRD, CNES, UPS, 14 avenue Edouard-Belin, 31400 Toulouse, France
Ofri Johan
Research and Development Institute for Ornamental Fish Culture, Jl. Perikanan No. 13, Pancoran Mas, Kota Depok, Jawa Barat 16436, Indonesia
Christophe E. Menkes
Laboratoire d'Océanographie et du Climat: Expérimentations et Approches Numériques, Sorbonne Universités, UPMC Université Paris 06, IPSL, UMR CNRS/IRD/MNHN, B.P.A5-98848, Noumea, New Caledonia
Fernando Niño
Laboratoire d'Etudes en Géophysique et Océanographie Spatiales, Université de Toulouse, CNRS, IRD, CNES, UPS, 14 avenue Edouard-Belin, 31400 Toulouse, France
Florence Birol
Laboratoire d'Etudes en Géophysique et Océanographie Spatiales, Université de Toulouse, CNRS, IRD, CNES, UPS, 14 avenue Edouard-Belin, 31400 Toulouse, France
Sylvain Ouillon
Laboratoire d'Etudes en Géophysique et Océanographie Spatiales, Université de Toulouse, CNRS, IRD, CNES, UPS, 14 avenue Edouard-Belin, 31400 Toulouse, France
UMR9220 ENTROPIE, Institut de Recherche pour le Développement, Université de la Réunion, CNRS, B.P.A5, 98848, Noumea, New Caledonia
Institute for Marine Research and Observation, SEACORM/INDESO center, Jl. Baru Perancak, Negara-Jembrana, Bali 82251, Indonesia
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Romain Le Gendre, David Varillon, Sylvie Fiat, Régis Hocdé, Antoine De Ramon N'Yeurt, Jérôme Aucan, Sophie Cravatte, Maxime Duphil, Alexandre Ganachaud, Baptiste Gaudron, Elodie Kestenare, Vetea Liao, Bernard Pelletier, Alexandre Peltier, Anne-Lou Schaefer, Thomas Trophime, Simon Van Wynsberge, Yves Dandonneau, Michel Allenbach, and Christophe Menkes
Earth Syst. Sci. Data Discuss., https://doi.org/10.5194/essd-2024-394, https://doi.org/10.5194/essd-2024-394, 2024
Preprint under review for ESSD
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Due to ocean warming, coral reef ecosystems are strongly impacted with dystrophic events and corals experiencing increasing frequencies of bleaching events. In-situ observation remains the best alternative for accurate characterization of trends and extremes in these shallow environments. This paper presents the coastal temperature dataset of the ReefTEMPS monitoring network which spreads over multiple Pacific Island Countries and Territories (PICTS) in the Western and Central South Pacific.
Sarah Albernhe, Thomas Gorgues, Olivier Titaud, Patrick Lehodey, Christophe Menkes, and Anna Conchon
State Planet Discuss., https://doi.org/10.5194/sp-2024-35, https://doi.org/10.5194/sp-2024-35, 2024
Preprint under review for SP
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Micronekton are marine organisms gathering a wide diversity of taxa (crustaceans, fish, cephalopods, etc.), 2 to 20 cm in size. They are responsible for an important carbon export to the deep ocean and are the main prey for marine predators. We define provinces of homogeneous environmental parameters, representing areas of common micronekton biomass and vertical structure. We observe the evolution of the provinces in time from 1998 to 2023, to account for the seasonal to interannual variability.
Oriane Bruyère, Romain Le Gendre, Vetea Liao, and Serge Andréfouët
Earth Syst. Sci. Data, 16, 667–679, https://doi.org/10.5194/essd-16-667-2024, https://doi.org/10.5194/essd-16-667-2024, 2024
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During 2019–2020, the lagoon and forereefs of Gambier Island (French Polynesia) were monitored with oceanographic instruments to measure lagoon hydrodynamics and ocean–lagoon water exchanges. Gambier Island is a key black pearl producer and the study goal was to understand the processes influencing spat collection of pearl oyster Pinctada margaritifera, the species used to produce black pearls. The data set is provided to address local pearl farming questions and other investigations as well.
Oriane Bruyère, Romain Le Gendre, Mathilde Chauveau, Bertrand Bourgeois, David Varillon, John Butscher, Thomas Trophime, Yann Follin, Jérôme Aucan, Vetea Liao, and Serge Andréfouët
Earth Syst. Sci. Data, 15, 5553–5573, https://doi.org/10.5194/essd-15-5553-2023, https://doi.org/10.5194/essd-15-5553-2023, 2023
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During 2018–2022, four pearl farming Tuamotu atolls (French Polynesia) were studied with oceanographic instruments to measure lagoon hydrodynamics and ocean-lagoon water exchanges. The goal was to gain knowledge on the processes influencing the spat collection of the pearl oyster Pinctada margaritifera, the species used to produce black pearls. A worldwide unique oceanographic atoll data set is provided to address local pearl farming questions and other fundamental and applied investigations.
Alice Carret, Florence Birol, Claude Estournel, and Bruno Zakardjian
Ocean Sci., 19, 903–921, https://doi.org/10.5194/os-19-903-2023, https://doi.org/10.5194/os-19-903-2023, 2023
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This study presents a methodology to investigate the ability of satellite altimetry to observe a coastal current, the Northern Current, in the NW Mediterannean Sea. We use a high-resolution regional model, validated with HF radars and in situ data. The model is used as a reference and compared to three different missions (Jason 2, SARAL and Sentinel-3), studying both the surface velocity and the sea surface height signature of the current. The performance of the three missions was also compared.
Djoirka Minto Dimoune, Florence Birol, Fabrice Hernandez, Fabien Léger, and Moacyr Araujo
Ocean Sci., 19, 251–268, https://doi.org/10.5194/os-19-251-2023, https://doi.org/10.5194/os-19-251-2023, 2023
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Altimeter-derived currents are used here to revisit the seasonal and interannual variability of all surface currents involved in the western tropical Atlantic circulation. A new approach based on the calculation of the current strengths and core positions is used to investigate the relationship between the currents, the remote wind variability, and the tropical Atlantic modes. The results show relationships at the seasonal and interannual timescale depending on the location of the currents.
Sakaros Bogning, Frédéric Frappart, Gil Mahé, Adrien Paris, Raphael Onguene, Fabien Blarel, Fernando Niño, Jacques Etame, and Jean-Jacques Braun
Proc. IAHS, 384, 181–186, https://doi.org/10.5194/piahs-384-181-2021, https://doi.org/10.5194/piahs-384-181-2021, 2021
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This paper investigates links between rainfall variability in the Ogooué River Basin (ORB) and El Niño Southern Oscillation (ENSO) in the Pacific Ocean. Recent hydroclimatology studies of the ORB and surrounding areas resulting in contrasting conclusions about links between rainfall variability and ENSO. Then, this work uses cross-wavelet and wavelet coherence analysis to highlight significant links between ENSO and rainfall in the ORB.
Sophie Cravatte, Guillaume Serazin, Thierry Penduff, and Christophe Menkes
Ocean Sci., 17, 487–507, https://doi.org/10.5194/os-17-487-2021, https://doi.org/10.5194/os-17-487-2021, 2021
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The various currents in the southwestern Pacific Ocean contribute to the redistribution of waters from the subtropical gyre equatorward and poleward. The drivers of their interannual variability are not completely understood but are usually thought to be related to well-known climate modes of variability. Here, we suggest that oceanic chaotic variability alone, which is by definition unpredictable, explains the majority of this interannual variability south of 20° S.
Delphine Dissard, Gert Jan Reichart, Christophe Menkes, Morgan Mangeas, Stephan Frickenhaus, and Jelle Bijma
Biogeosciences, 18, 423–439, https://doi.org/10.5194/bg-18-423-2021, https://doi.org/10.5194/bg-18-423-2021, 2021
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Results from a data set acquired from living foraminifera T. sacculifer collected from surface waters are presented, allowing us to establish a new Mg/Ca–Sr/Ca–temperature equation improving temperature reconstructions. When combining equations, δ18Ow can be reconstructed with a precision of ± 0.5 ‰, while successive reconstructions involving Mg/Ca and δ18Oc preclude salinity reconstruction with a precision better than ± 1.69. A new direct linear fit to reconstruct salinity could be established.
Yvan Gouzenes, Fabien Léger, Anny Cazenave, Florence Birol, Pascal Bonnefond, Marcello Passaro, Fernando Nino, Rafael Almar, Olivier Laurain, Christian Schwatke, Jean-François Legeais, and Jérôme Benveniste
Ocean Sci., 16, 1165–1182, https://doi.org/10.5194/os-16-1165-2020, https://doi.org/10.5194/os-16-1165-2020, 2020
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This study provides for the first time estimates of sea level anomalies very close to the coastline based on high-resolution retracked altimetry data, as well as corresponding sea level trends, over a 14-year time span. This new information has so far not been provided by standard altimetry data.
Violaine Piton, Marine Herrmann, Florent Lyard, Patrick Marsaleix, Thomas Duhaut, Damien Allain, and Sylvain Ouillon
Geosci. Model Dev., 13, 1583–1607, https://doi.org/10.5194/gmd-13-1583-2020, https://doi.org/10.5194/gmd-13-1583-2020, 2020
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Consequences of tidal dynamics on hydro-sedimentary processes are a recurrent issue in estuarine and coastal processes studies, and accurate tidal solutions are a prerequisite for modeling sediment transport. This study presents the implementation and optimization of a model configuration in terms of bathymetry and bottom friction and assess the influence of these parameters on tidal solutions, in a macro-tidal environment: the Gulf of Tonkin (Vietnam).
Alice Carret, Florence Birol, Claude Estournel, Bruno Zakardjian, and Pierre Testor
Ocean Sci., 15, 269–290, https://doi.org/10.5194/os-15-269-2019, https://doi.org/10.5194/os-15-269-2019, 2019
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This study uses different in situ and satellite measurements to investigate ocean circulation in the NW Mediterranean Sea. We analyze how the different instruments (satellite altimetry, HF radars, gliders, ADCPs) capture current variability and how they complement each other. We demonstrate the ability of satellite altimetry to capture the fluctuations of the narrow coastal Northern Current at different timescales. This study provides an integrated approach to a coastal dynamics study.
Ivan Manso-Narvarte, Ainhoa Caballero, Anna Rubio, Claire Dufau, and Florence Birol
Ocean Sci., 14, 1265–1281, https://doi.org/10.5194/os-14-1265-2018, https://doi.org/10.5194/os-14-1265-2018, 2018
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Our main aim is to compare two different measuring systems of the surface ocean currents: land-based, high-frequency radar and satellite altimetry. Results show that the surface currents detected by both systems agree up to a 70 %, mostly in areas of persistent currents. This work is a first step in the combination of both technologies for an improved monitoring of the coastal surface ocean dynamics.
Guillaume Rousset, Florian De Boissieu, Christophe E. Menkes, Jérôme Lefèvre, Robert Frouin, Martine Rodier, Vincent Ridoux, Sophie Laran, Sophie Bonnet, and Cécile Dupouy
Biogeosciences, 15, 5203–5219, https://doi.org/10.5194/bg-15-5203-2018, https://doi.org/10.5194/bg-15-5203-2018, 2018
Cyril Dutheil, Olivier Aumont, Thomas Gorguès, Anne Lorrain, Sophie Bonnet, Martine Rodier, Cécile Dupouy, Takuhei Shiozaki, and Christophe Menkes
Biogeosciences, 15, 4333–4352, https://doi.org/10.5194/bg-15-4333-2018, https://doi.org/10.5194/bg-15-4333-2018, 2018
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N2 fixation is recognized as one of the major sources of nitrogen in the ocean. Thus, N2 fixation sustains a significant part of the primary production (PP) by supplying the most common limiting nutrient for phytoplankton growth. From numerical simulations, the local maximums of Trichodesmium biomass in the Pacific are found around islands, explained by the iron fluxes from island sediments. We assessed that 15 % of the PP may be due to Trichodesmium in the low-nutrient, low-chlorophyll areas.
Rosemary Morrow, Alice Carret, Florence Birol, Fernando Nino, Guillaume Valladeau, Francois Boy, Celine Bachelier, and Bruno Zakardjian
Ocean Sci., 13, 13–29, https://doi.org/10.5194/os-13-13-2017, https://doi.org/10.5194/os-13-13-2017, 2017
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Spectral analyses of along-track altimetric data are used to estimate noise levels and observable ocean scales in the NW Mediterranean Sea. In winter, all altimetric missions can observe wavelengths down to 40–50 km (individual feature diameters of 20–25 km). In summer, SARAL can detect scales down to 35 km, whereas Jason-2 and CryoSat-2 with higher noise can only observe scales less than 50–55 km. Along-track altimeter data are also compared with collocated glider and coastal HF radar data.
Related subject area
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Early life stages of fish under ocean alkalinity enhancement in coastal plankton communities
Planktonic foraminifera assemblage composition and flux dynamics inferred from an annual sediment trap record in the central Mediterranean Sea
Reefal ostracod assemblages from the Zanzibar Archipelago (Tanzania)
Composite calcite and opal test in Foraminifera (Rhizaria)
Influence of oxygen minimum zone on macrobenthic community structure in the northern Benguela Upwelling System: a macro-nematode perspective
Phytoplankton adaptation to steady or changing environments affects marine ecosystem functioning
Simulated terrestrial runoff shifts the metabolic balance of a coastal Mediterranean plankton community towards heterotrophy
Contrasting carbon cycling in the benthic food webs between a river-fed, high-energy canyon and an upper continental slope
A critical trade-off between nitrogen quota and growth allows Coccolithus braarudii life cycle phases to exploit varying environment
Structural complexity and benthic metabolism: resolving the links between carbon cycling and biodiversity in restored seagrass meadows
Building your own mountain: the effects, limits, and drawbacks of cold-water coral ecosystem engineering
Phytoplankton response to increased nickel in the context of ocean alkalinity enhancement
Year-long benthic measurements of environmental conditions indicate high sponge biomass is related to strong bottom currents over the Northern Labrador shelf
Diversity and density relationships between lebensspuren and tracemaking organisms: a study case from abyssal northwest Pacific
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Multifactorial effects of warming, low irradiance, and low salinity on Arctic kelps
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The bottom mixed layer depth as an indicator of subsurface Chlorophyll a distribution
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Impact of deoxygenation and warming on global marine species in the 21st century
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Upwelled plankton community modulates surface bloom succession and nutrient availability in a natural plankton assemblage
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Mediterranean seagrasses as carbon sinks: methodological and regional differences
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Species richness and functional attributes of fish assemblages across a large-scale salinity gradient in shallow coastal areas
Modeling the growth and sporulation dynamics of the macroalga Ulva in mixed-age populations in cultivation and the formation of green tides
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Enhanced chlorophyll-a concentration in the wake of Sable Island, eastern Canada, revealed by two decades of satellite observations: a response to grey seal population dynamics?
Population dynamics and reproduction strategies of planktonic foraminifera in the open ocean
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Silvan Urs Goldenberg, Ulf Riebesell, Daniel Brüggemann, Gregor Börner, Michael Sswat, Arild Folkvord, Maria Couret, Synne Spjelkavik, Nicolás Sánchez, Cornelia Jaspers, and Marta Moyano
Biogeosciences, 21, 4521–4532, https://doi.org/10.5194/bg-21-4521-2024, https://doi.org/10.5194/bg-21-4521-2024, 2024
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Ocean alkalinity enhancement (OAE) is being evaluated as a carbon dioxide removal technology for climate change mitigation. With an experiment on species communities, we show that larval and juvenile fish can be resilient to the resulting perturbation of seawater. Fish may hence recruit successfully and continue to support fisheries' production in regions of OAE. Our findings help to establish an environmentally safe operating space for this ocean-based solution.
Thibauld M. Béjard, Andrés S. Rigual-Hernández, Javier P. Tarruella, José-Abel Flores, Anna Sanchez-Vidal, Irene Llamas-Cano, and Francisco J. Sierro
Biogeosciences, 21, 4051–4076, https://doi.org/10.5194/bg-21-4051-2024, https://doi.org/10.5194/bg-21-4051-2024, 2024
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The Mediterranean Sea is regarded as a climate change hotspot. Documenting the population of planktonic foraminifera is crucial. In the Sicily Channel, fluxes are higher during winter and positively linked with chlorophyll a concentration and cool temperatures. A comparison with other Mediterranean sites shows the transitional aspect of the studied zone. Finally, modern populations significantly differ from those in the sediment, highlighting a possible effect of environmental change.
Skye Yunshu Tian, Martin Langer, Moriaki Yasuhara, and Chih-Lin Wei
Biogeosciences, 21, 3523–3536, https://doi.org/10.5194/bg-21-3523-2024, https://doi.org/10.5194/bg-21-3523-2024, 2024
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Through the first large-scale study of meiobenthic ostracods from the diverse and productive reef ecosystem in the Zanzibar Archipelago, Tanzania, we found that the diversity and composition of ostracod assemblages as controlled by benthic habitats and human impacts were indicative of overall reef health, and we highlighted the usefulness of ostracods as a model proxy to monitor and understand the degradation of reef ecosystems from the coral-dominated phase to the algae-dominated phase.
Julien Richirt, Satoshi Okada, Yoshiyuki Ishitani, Katsuyuki Uematsu, Akihiro Tame, Kaya Oda, Noriyuki Isobe, Toyoho Ishimura, Masashi Tsuchiya, and Hidetaka Nomaki
Biogeosciences, 21, 3271–3288, https://doi.org/10.5194/bg-21-3271-2024, https://doi.org/10.5194/bg-21-3271-2024, 2024
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We report the first benthic foraminifera with a composite test (i.e. shell) made of opal, which coats the inner part of the calcitic layer. Using comprehensive techniques, we describe the morphology and the composition of this novel opal layer and provide evidence that the opal is precipitated by the foraminifera itself. We explore the potential precipitation process and function(s) of this composite test and further discuss the possible implications for palaeoceanographic reconstructions.
Said Mohamed Hashim, Beth Wangui Waweru, and Agnes Muthumbi
Biogeosciences, 21, 2995–3006, https://doi.org/10.5194/bg-21-2995-2024, https://doi.org/10.5194/bg-21-2995-2024, 2024
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The study investigates the impact of decreasing oxygen in the ocean on macrofaunal communities using the BUS as an example. It identifies distinct shifts in community composition and feeding guilds across oxygen zones, with nematodes dominating dysoxic areas. These findings underscore the complex responses of benthic organisms to oxygen gradients, crucial for understanding ecosystem dynamics in hypoxic environments and their implications for marine biodiversity and sustainability.
Isabell Hochfeld and Jana Hinners
EGUsphere, https://doi.org/10.5194/egusphere-2024-1246, https://doi.org/10.5194/egusphere-2024-1246, 2024
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Ecosystem models disagree on future changes in marine ecosystem functioning. We suspect that the lack of phytoplankton adaptation represents a major uncertainty factor, given the key role that phytoplankton play in marine ecosystems. Using an evolutionary ecosystem model, we found that phytoplankton adaptation can notably change simulated ecosystem dynamics. Future models should include phytoplankton adaptation, otherwise they can systematically overestimate future ecosystem-level changes.
Tanguy Soulié, Francesca Vidussi, Justine Courboulès, Marie Heydon, Sébastien Mas, Florian Voron, Carolina Cantoni, Fabien Joux, and Behzad Mostajir
Biogeosciences, 21, 1887–1902, https://doi.org/10.5194/bg-21-1887-2024, https://doi.org/10.5194/bg-21-1887-2024, 2024
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Due to climate change, it is projected that extreme rainfall events, which bring terrestrial matter into coastal seas, will occur more frequently in the Mediterranean region. To test the effects of runoffs of terrestrial matter on plankton communities from Mediterranean coastal waters, an in situ mesocosm experiment was conducted. The simulated runoff affected key processes mediated by plankton, such as primary production and respiration, suggesting major consequences of such events.
Chueh-Chen Tung, Yu-Shih Lin, Jian-Xiang Liao, Tzu-Hsuan Tu, James T. Liu, Li-Hung Lin, Pei-Ling Wang, and Chih-Lin Wei
Biogeosciences, 21, 1729–1756, https://doi.org/10.5194/bg-21-1729-2024, https://doi.org/10.5194/bg-21-1729-2024, 2024
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This study contrasts seabed food webs between a river-fed, high-energy canyon and the nearby slope. We show higher organic carbon (OC) flows through the canyon than the slope. Bacteria dominated the canyon, while seabed fauna contributed more to the slope food web. Due to frequent perturbation, the canyon had a lower faunal stock and OC recycling. Only 4 % of the seabed OC flux enters the canyon food web, suggesting a significant role of the river-fed canyon in transporting OC to the deep sea.
Joost de Vries, Fanny Monteiro, Gerald Langer, Colin Brownlee, and Glen Wheeler
Biogeosciences, 21, 1707–1727, https://doi.org/10.5194/bg-21-1707-2024, https://doi.org/10.5194/bg-21-1707-2024, 2024
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Calcifying phytoplankton (coccolithophores) utilize a life cycle in which they can grow and divide into two different phases. These two phases (HET and HOL) vary in terms of their physiology and distributions, with many unknowns about what the key differences are. Using a combination of lab experiments and model simulations, we find that nutrient storage is a critical difference between the two phases and that this difference allows them to inhabit different nitrogen input regimes.
Theodor Kindeberg, Karl Michael Attard, Jana Hüller, Julia Müller, Cintia Organo Quintana, and Eduardo Infantes
Biogeosciences, 21, 1685–1705, https://doi.org/10.5194/bg-21-1685-2024, https://doi.org/10.5194/bg-21-1685-2024, 2024
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Seagrass meadows are hotspots for biodiversity and productivity, and planting seagrass is proposed as a tool for mitigating biodiversity loss and climate change. We assessed seagrass planted in different years and found that benthic oxygen and carbon fluxes increased as the seabed developed from bare sediments to a mature seagrass meadow. This increase was partly linked to the diversity of colonizing algae which increased the light-use efficiency of the seagrass meadow community.
Anna-Selma van der Kaaden, Sandra R. Maier, Siluo Chen, Laurence H. De Clippele, Evert de Froe, Theo Gerkema, Johan van de Koppel, Furu Mienis, Christian Mohn, Max Rietkerk, Karline Soetaert, and Dick van Oevelen
Biogeosciences, 21, 973–992, https://doi.org/10.5194/bg-21-973-2024, https://doi.org/10.5194/bg-21-973-2024, 2024
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Combining hydrodynamic simulations and annotated videos, we separated which hydrodynamic variables that determine reef cover are engineered by cold-water corals and which are not. Around coral mounds, hydrodynamic zones seem to create a typical reef zonation, restricting corals from moving deeper (the expected response to climate warming). But non-engineered downward velocities in winter (e.g. deep winter mixing) seem more important for coral reef growth than coral engineering.
Xiaoke Xin, Giulia Faucher, and Ulf Riebesell
Biogeosciences, 21, 761–772, https://doi.org/10.5194/bg-21-761-2024, https://doi.org/10.5194/bg-21-761-2024, 2024
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Ocean alkalinity enhancement (OAE) is a promising approach to remove CO2 by accelerating natural rock weathering. However, some of the alkaline substances contain trace metals which could be toxic to marine life. By exposing three representative phytoplankton species to Ni released from alkaline materials, we observed varying responses of phytoplankton to nickel concentrations, suggesting caution should be taken and toxic thresholds should be avoided in OAE with Ni-rich materials.
Evert de Froe, Igor Yashayaev, Christian Mohn, Johanne Vad, Furu Mienis, Gerard Duineveld, Ellen Kenchington, Erica Head, Steve Ross, Sabena Blackbird, George Wolff, Murray Roberts, Barry MacDonald, Graham Tulloch, and Dick van Oevelen
EGUsphere, https://doi.org/10.31223/X58968, https://doi.org/10.31223/X58968, 2024
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Deep-sea sponge grounds are distributed globally and are considered hotspots of biological diversity and biogeochemical cycling. To date, little is known about the environmental constraints that control where deep-sea sponge grounds occur and what conditions favor high sponge biomass. Here, we characterize oceanographic conditions at two contrasting sponge grounds. Our results imply that sponges and associated fauna benefit from strong tidal currents and favorable regional ocean currents.
Olmo Miguez-Salas, Angelika Brandt, Henry Knauber, and Torben Riehl
Biogeosciences, 21, 641–655, https://doi.org/10.5194/bg-21-641-2024, https://doi.org/10.5194/bg-21-641-2024, 2024
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In the deep sea, the interaction between benthic fauna (tracemakers) and substrate can be preserved as traces (i.e. lebensspuren), which are common features of seafloor landscapes, rendering them promising proxies for inferring biodiversity from marine images. No general correlation was observed between traces and benthic fauna. However, a local correlation was observed between specific stations depending on unknown tracemakers, tracemaker behaviour, and lebensspuren morphotypes.
Cale A. Miller, Pierre Urrutti, Jean-Pierre Gattuso, Steeve Comeau, Anaïs Lebrun, Samir Alliouane, Robert W. Schlegel, and Frédéric Gazeau
Biogeosciences, 21, 315–333, https://doi.org/10.5194/bg-21-315-2024, https://doi.org/10.5194/bg-21-315-2024, 2024
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This work describes an experimental system that can replicate and manipulate environmental conditions in marine or aquatic systems. Here, we show how the temperature and salinity of seawater delivered from a fjord is manipulated to experimental tanks on land. By constantly monitoring temperature and salinity in each tank via a computer program, the system continuously adjusts automated flow valves to ensure the seawater in each tank matches the targeted experimental conditions.
Rachel A. Kruft Welton, George Hoppit, Daniela N. Schmidt, James D. Witts, and Benjamin C. Moon
Biogeosciences, 21, 223–239, https://doi.org/10.5194/bg-21-223-2024, https://doi.org/10.5194/bg-21-223-2024, 2024
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We conducted a meta-analysis of known experimental literature examining how marine bivalve growth rates respond to climate change. Growth is usually negatively impacted by climate change. Bivalve eggs/larva are generally more vulnerable than either juveniles or adults. Available data on the bivalve response to climate stressors are biased towards early growth stages (commercially important in the Global North), and many families have only single experiments examining climate change impacts.
Vincent Mouchi, Christophe Pecheyran, Fanny Claverie, Cécile Cathalot, Marjolaine Matabos, Yoan Germain, Olivier Rouxel, Didier Jollivet, Thomas Broquet, and Thierry Comtet
Biogeosciences, 21, 145–160, https://doi.org/10.5194/bg-21-145-2024, https://doi.org/10.5194/bg-21-145-2024, 2024
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The impact of deep-sea mining will depend critically on the ability of larval dispersal of hydrothermal mollusks to connect and replenish natural populations. However, assessing connectivity is extremely challenging, especially in the deep sea. Here, we investigate the potential of using the chemical composition of larval shells to discriminate larval origins between multiple hydrothermal sites in the southwest Pacific. Our results confirm that this method can be applied with high accuracy.
Hyunjae Chung, Jikang Park, Mijin Park, Yejin Kim, Unyoung Chun, Sukyoung Yun, Won Sang Lee, Seung-Tae Yoon, and Won Young Lee
EGUsphere, https://doi.org/10.5194/egusphere-2023-2757, https://doi.org/10.5194/egusphere-2023-2757, 2024
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Understanding how marine animals adapt to spatial and temporal shifts in oceanographic conditions is of utmost importance. In this paper, we investigated the influence of changes in seawater properties on the seasonal behavior of Weddell seals in the Ross Sea, Antarctica. Our findings could serve as a baseline and establish a foundational understanding for future research, particularly concerning the impact of marine environmental changes on the ecosystem of the Ross Sea Marine Protected Area.
Anaïs Lebrun, Cale Andrew Miller, Marc Meynadier, Steeve Comeau, Pierre Urrutti, Samir Alliouane, Robert Schlegel, Jean-Pierre Gattuso, and Frédéric Gazeau
EGUsphere, https://doi.org/10.5194/egusphere-2023-1875, https://doi.org/10.5194/egusphere-2023-1875, 2023
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We tested the effects of warming, low salinity, and low irradiance on Arctic kelps. We show that Alaria esculenta is adapted to low light conditions, which might explain why it is becoming dominant at depth. Saccharina latissima exhibited nitrogen limitation suggesting coastal erosion and permafrost thawing could benefit it. Laminaria digitata did not respond to the treatments. Gene expression of Hedophyllum nigripes and S. latissima indicated acclimation to the experimental treatments.
Anna-Marie Winter, Nadezda Vasilyeva, and Artem Vladimirov
Biogeosciences, 20, 3683–3716, https://doi.org/10.5194/bg-20-3683-2023, https://doi.org/10.5194/bg-20-3683-2023, 2023
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There is an increasing number of fish in poor state, and many do not recover, even when fishing pressure is ceased. An Allee effect can hinder population recovery because it suppresses the fish's productivity at low abundance. With a model fitted to 17 Atlantic cod stocks, we find that ocean warming and fishing can cause an Allee effect. If present, the Allee effect hinders fish recovery. This shows that Allee effects are dynamic, not uncommon, and calls for precautionary management measures.
Afrah Alothman, Daffne López-Sandoval, Carlos M. Duarte, and Susana Agustí
Biogeosciences, 20, 3613–3624, https://doi.org/10.5194/bg-20-3613-2023, https://doi.org/10.5194/bg-20-3613-2023, 2023
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This study investigates bacterial dissolved inorganic carbon (DIC) fixation in the Red Sea, an oligotrophic ecosystem, using stable-isotope labeling and spectroscopy. The research reveals that bacterial DIC fixation significantly contributes to total DIC fixation, in the surface and deep water. The study demonstrates that as primary production decreases, the role of bacterial DIC fixation increases, emphasizing its importance with photosynthesis in estimating oceanic carbon dioxide production.
Arianna Zampollo, Thomas Cornulier, Rory O'Hara Murray, Jacqueline Fiona Tweddle, James Dunning, and Beth E. Scott
Biogeosciences, 20, 3593–3611, https://doi.org/10.5194/bg-20-3593-2023, https://doi.org/10.5194/bg-20-3593-2023, 2023
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This paper highlights the use of the bottom mixed layer depth (BMLD: depth between the end of the pycnocline and the mixed layer below) to investigate subsurface Chlorophyll a (a proxy of primary production) in temperate stratified shelf waters. The strict correlation between subsurface Chl a and BMLD becomes relevant in shelf-productive waters where multiple stressors (e.g. offshore infrastructure) will change the stratification--mixing balance and related carbon fluxes.
Marco Fusi, Sylvain Rigaud, Giovanna Guadagnin, Alberto Barausse, Ramona Marasco, Daniele Daffonchio, Julie Régis, Louison Huchet, Capucine Camin, Laura Pettit, Cristina Vina-Herbon, and Folco Giomi
Biogeosciences, 20, 3509–3521, https://doi.org/10.5194/bg-20-3509-2023, https://doi.org/10.5194/bg-20-3509-2023, 2023
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Oxygen availability in marine water and freshwater is very variable at daily and seasonal scales. The dynamic nature of oxygen fluctuations has important consequences for animal and microbe physiology and ecology, yet it is not fully understood. In this paper, we showed the heterogeneous nature of the aquatic oxygen landscape, which we defined here as the
oxyscape, and we addressed the importance of considering the oxyscape in the modelling and managing of aquatic ecosystems.
Anne L. Morée, Tayler M. Clarke, William W. L. Cheung, and Thomas L. Frölicher
Biogeosciences, 20, 2425–2454, https://doi.org/10.5194/bg-20-2425-2023, https://doi.org/10.5194/bg-20-2425-2023, 2023
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Ocean temperature and oxygen shape marine habitats together with species’ characteristics. We calculated the impacts of projected 21st-century warming and oxygen loss on the contemporary habitat volume of 47 marine species and described the drivers of these impacts. Most species lose less than 5 % of their habitat at 2 °C of global warming, but some species incur losses 2–3 times greater than that. We also calculate which species may be most vulnerable to climate change and why this is the case.
Markus A. Min, David M. Needham, Sebastian Sudek, Nathan Kobun Truelove, Kathleen J. Pitz, Gabriela M. Chavez, Camille Poirier, Bente Gardeler, Elisabeth von der Esch, Andrea Ludwig, Ulf Riebesell, Alexandra Z. Worden, and Francisco P. Chavez
Biogeosciences, 20, 1277–1298, https://doi.org/10.5194/bg-20-1277-2023, https://doi.org/10.5194/bg-20-1277-2023, 2023
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Emerging molecular methods provide new ways of understanding how marine communities respond to changes in ocean conditions. Here, environmental DNA was used to track the temporal evolution of biological communities in the Peruvian coastal upwelling system and in an adjacent enclosure where upwelling was simulated. We found that the two communities quickly diverged, with the open ocean being one found during upwelling and the enclosure evolving to one found under stratified conditions.
Wojciech Majewski, Witold Szczuciński, and Andrew J. Gooday
Biogeosciences, 20, 523–544, https://doi.org/10.5194/bg-20-523-2023, https://doi.org/10.5194/bg-20-523-2023, 2023
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We studied foraminifera living in the fjords of South Georgia, a sub-Antarctic island sensitive to climate change. As conditions in water and on the seafloor vary, different associations of these microorganisms dominate far inside, in the middle, and near fjord openings. Assemblages in inner and middle parts of fjords are specific to South Georgia, but they may become widespread with anticipated warming. These results are important for interpretating fossil records and monitoring future change.
Allanah Joy Paul, Lennart Thomas Bach, Javier Arístegui, Elisabeth von der Esch, Nauzet Hernández-Hernández, Jonna Piiparinen, Laura Ramajo, Kristian Spilling, and Ulf Riebesell
Biogeosciences, 19, 5911–5926, https://doi.org/10.5194/bg-19-5911-2022, https://doi.org/10.5194/bg-19-5911-2022, 2022
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We investigated how different deep water chemistry and biology modulate the response of surface phytoplankton communities to upwelling in the Peruvian coastal zone. Our results show that the most influential drivers were the ratio of inorganic nutrients (N : P) and the microbial community present in upwelling source water. These led to unexpected and variable development in the phytoplankton assemblage that could not be predicted by the amount of inorganic nutrients alone.
Hanna M. Kauko, Philipp Assmy, Ilka Peeken, Magdalena Różańska-Pluta, Józef M. Wiktor, Gunnar Bratbak, Asmita Singh, Thomas J. Ryan-Keogh, and Sebastien Moreau
Biogeosciences, 19, 5449–5482, https://doi.org/10.5194/bg-19-5449-2022, https://doi.org/10.5194/bg-19-5449-2022, 2022
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This article studies phytoplankton (microscopic
plantsin the ocean capable of photosynthesis) in Kong Håkon VII Hav in the Southern Ocean. Different species play different roles in the ecosystem, and it is therefore important to assess the species composition. We observed that phytoplankton blooms in this area are formed by large diatoms with strong silica armors, which can lead to high silica (and sometimes carbon) export to depth and be important prey for krill.
Chloe Carbonne, Steeve Comeau, Phoebe T. W. Chan, Keyla Plichon, Jean-Pierre Gattuso, and Núria Teixidó
Biogeosciences, 19, 4767–4777, https://doi.org/10.5194/bg-19-4767-2022, https://doi.org/10.5194/bg-19-4767-2022, 2022
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For the first time, our study highlights the synergistic effects of a 9-month warming and acidification combined stress on the early life stages of a Mediterranean azooxanthellate coral, Astroides calycularis. Our results predict a decrease in dispersion, settlement, post-settlement linear extention, budding and survival under future global change and that larvae and recruits of A. calycularis are stages of interest for this Mediterranean coral resistance, resilience and conservation.
Iris E. Hendriks, Anna Escolano-Moltó, Susana Flecha, Raquel Vaquer-Sunyer, Marlene Wesselmann, and Núria Marbà
Biogeosciences, 19, 4619–4637, https://doi.org/10.5194/bg-19-4619-2022, https://doi.org/10.5194/bg-19-4619-2022, 2022
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Seagrasses are marine plants with the capacity to act as carbon sinks due to their high primary productivity, using carbon for growth. This capacity can play a key role in climate change mitigation. We compiled and published data showing that two Mediterranean seagrass species have different metabolic rates, while the study method influences the rates of the measurements. Most communities act as carbon sinks, while the western basin might be more productive than the eastern Mediterranean.
Raúl Tapia, Sze Ling Ho, Hui-Yu Wang, Jeroen Groeneveld, and Mahyar Mohtadi
Biogeosciences, 19, 3185–3208, https://doi.org/10.5194/bg-19-3185-2022, https://doi.org/10.5194/bg-19-3185-2022, 2022
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We report census counts of planktic foraminifera in depth-stratified plankton net samples off Indonesia. Our results show that the vertical distribution of foraminifera species routinely used in paleoceanographic reconstructions varies in hydrographically distinct regions, likely in response to food availability. Consequently, the thermal gradient based on mixed layer and thermocline dwellers also differs for these regions, suggesting potential implications for paleoceanographic reconstructions.
Ricardo González-Gil, Neil S. Banas, Eileen Bresnan, and Michael R. Heath
Biogeosciences, 19, 2417–2426, https://doi.org/10.5194/bg-19-2417-2022, https://doi.org/10.5194/bg-19-2417-2022, 2022
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In oceanic waters, the accumulation of phytoplankton biomass in winter, when light still limits growth, is attributed to a decrease in grazing as the mixed layer deepens. However, in coastal areas, it is not clear whether winter biomass can accumulate without this deepening. Using 21 years of weekly data, we found that in the Scottish coastal North Sea, the seasonal increase in light availability triggers the accumulation of phytoplankton biomass in winter, when light limitation is strongest.
Birgit Koehler, Mårten Erlandsson, Martin Karlsson, and Lena Bergström
Biogeosciences, 19, 2295–2312, https://doi.org/10.5194/bg-19-2295-2022, https://doi.org/10.5194/bg-19-2295-2022, 2022
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Understanding species richness patterns remains a challenge for biodiversity management. We estimated fish species richness over a coastal salinity gradient (3–32) with a method that allowed comparing data from various sources. Species richness was 3-fold higher at high vs. low salinity, and salinity influenced species’ habitat preference, mobility and feeding type. If climate change causes upper-layer freshening of the Baltic Sea, further shifts along the identified patterns may be expected.
Uri Obolski, Thomas Wichard, Alvaro Israel, Alexander Golberg, and Alexander Liberzon
Biogeosciences, 19, 2263–2271, https://doi.org/10.5194/bg-19-2263-2022, https://doi.org/10.5194/bg-19-2263-2022, 2022
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The algal genus Ulva plays a major role in coastal ecosystems worldwide and is a promising prospect as an seagriculture crop. A substantial hindrance to cultivating Ulva arises from sudden sporulation, leading to biomass loss. This process is not yet well understood. Here, we characterize the dynamics of Ulva growth, considering the potential impact of sporulation inhibitors, using a mathematical model. Our findings are an essential step towards understanding the dynamics of Ulva growth.
Emanuela Fanelli, Samuele Menicucci, Sara Malavolti, Andrea De Felice, and Iole Leonori
Biogeosciences, 19, 1833–1851, https://doi.org/10.5194/bg-19-1833-2022, https://doi.org/10.5194/bg-19-1833-2022, 2022
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Zooplankton play a key role in marine ecosystems, forming the base of the marine food web and a link between primary producers and higher-order consumers, such as fish. This aspect is crucial in the Adriatic basin, one of the most productive and overexploited areas of the Mediterranean Sea. A better understanding of community and food web structure and their response to water mass changes is essential under a global warming scenario, as zooplankton are sensitive to climate change.
Masaya Yoshikai, Takashi Nakamura, Rempei Suwa, Sahadev Sharma, Rene Rollon, Jun Yasuoka, Ryohei Egawa, and Kazuo Nadaoka
Biogeosciences, 19, 1813–1832, https://doi.org/10.5194/bg-19-1813-2022, https://doi.org/10.5194/bg-19-1813-2022, 2022
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This study presents a new individual-based vegetation model to investigate salinity control on mangrove productivity. The model incorporates plant hydraulics and tree competition and predicts unique and complex patterns of mangrove forest structures that vary across soil salinity gradients. The presented model does not hold an empirical expression of salinity influence on productivity and thus may provide a better understanding of mangrove forest dynamics in future climate change.
Coulson A. Lantz, William Leggat, Jessica L. Bergman, Alexander Fordyce, Charlotte Page, Thomas Mesaglio, and Tracy D. Ainsworth
Biogeosciences, 19, 891–906, https://doi.org/10.5194/bg-19-891-2022, https://doi.org/10.5194/bg-19-891-2022, 2022
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Coral bleaching events continue to drive the degradation of coral reefs worldwide. In this study we measured rates of daytime coral reef community calcification and photosynthesis during a reef-wide bleaching event. Despite a measured decline in coral health across several taxa, there was no change in overall daytime community calcification and photosynthesis. These findings highlight potential limitations of these community-level metrics to reflect actual changes in coral health.
Hyewon Heather Kim, Jeff S. Bowman, Ya-Wei Luo, Hugh W. Ducklow, Oscar M. Schofield, Deborah K. Steinberg, and Scott C. Doney
Biogeosciences, 19, 117–136, https://doi.org/10.5194/bg-19-117-2022, https://doi.org/10.5194/bg-19-117-2022, 2022
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Heterotrophic marine bacteria are tiny organisms responsible for taking up organic matter in the ocean. Using a modeling approach, this study shows that characteristics (taxonomy and physiology) of bacteria are associated with a subset of ecological processes in the coastal West Antarctic Peninsula region, a system susceptible to global climate change. This study also suggests that bacteria will become more active, in particular large-sized cells, in response to changing climates in the region.
Alice E. Webb, Didier M. de Bakker, Karline Soetaert, Tamara da Costa, Steven M. A. C. van Heuven, Fleur C. van Duyl, Gert-Jan Reichart, and Lennart J. de Nooijer
Biogeosciences, 18, 6501–6516, https://doi.org/10.5194/bg-18-6501-2021, https://doi.org/10.5194/bg-18-6501-2021, 2021
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The biogeochemical behaviour of shallow reef communities is quantified to better understand the impact of habitat degradation and species composition shifts on reef functioning. The reef communities investigated barely support reef functions that are usually ascribed to conventional coral reefs, and the overall biogeochemical behaviour is found to be similar regardless of substrate type. This suggests a decrease in functional diversity which may therefore limit services provided by this reef.
Emmanuel Devred, Andrea Hilborn, and Cornelia Elizabeth den Heyer
Biogeosciences, 18, 6115–6132, https://doi.org/10.5194/bg-18-6115-2021, https://doi.org/10.5194/bg-18-6115-2021, 2021
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A theoretical model of grey seal seasonal abundance on Sable Island (SI) coupled with chlorophyll-a concentration [chl-a] measured by satellite revealed the impact of seal nitrogen fertilization on the surrounding waters of SI, Canada. The increase in seals from about 100 000 in 2003 to about 360 000 in 2018 during the breeding season is consistent with an increase in [chl-a] leeward of SI. The increase in seal abundance explains 8 % of the [chl-a] increase.
Julie Meilland, Michael Siccha, Maike Kaffenberger, Jelle Bijma, and Michal Kucera
Biogeosciences, 18, 5789–5809, https://doi.org/10.5194/bg-18-5789-2021, https://doi.org/10.5194/bg-18-5789-2021, 2021
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Planktonic foraminifera population dynamics has long been assumed to be controlled by synchronous reproduction and ontogenetic vertical migration (OVM). Due to contradictory observations, this concept became controversial. We here test it in the Atlantic ocean for four species of foraminifera representing the main clades. Our observations support the existence of synchronised reproduction and OVM but show that more than half of the population does not follow the canonical trajectory.
Federica Maggioni, Mireille Pujo-Pay, Jérome Aucan, Carlo Cerrano, Barbara Calcinai, Claude Payri, Francesca Benzoni, Yves Letourneur, and Riccardo Rodolfo-Metalpa
Biogeosciences, 18, 5117–5140, https://doi.org/10.5194/bg-18-5117-2021, https://doi.org/10.5194/bg-18-5117-2021, 2021
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Based on current experimental evidence, climate change will affect up to 90 % of coral reefs worldwide. The originality of this study arises from our recent discovery of an exceptional study site where environmental conditions (temperature, pH, and oxygen) are even worse than those forecasted for the future.
While these conditions are generally recognized as unfavorable for marine life, we found a rich and abundant coral reef thriving under such extreme environmental conditions.
Nisan Sariaslan and Martin R. Langer
Biogeosciences, 18, 4073–4090, https://doi.org/10.5194/bg-18-4073-2021, https://doi.org/10.5194/bg-18-4073-2021, 2021
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Analyses of foraminiferal assemblages from the Mamanguape mangrove estuary (northern Brazil) revealed highly diverse, species-rich, and structurally complex biotas. The atypical fauna resembles shallow-water offshore assemblages and are interpreted to be the result of highly saline ocean waters penetrating deep into the estuary. The findings contrast with previous studies, have implications for the fossil record, and provide novel perspectives for reconstructing mangrove environments.
Jutta E. Wollenburg, Jelle Bijma, Charlotte Cremer, Ulf Bickmeyer, and Zora Mila Colomba Zittier
Biogeosciences, 18, 3903–3915, https://doi.org/10.5194/bg-18-3903-2021, https://doi.org/10.5194/bg-18-3903-2021, 2021
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Cultured at in situ high-pressure conditions Cibicides and Cibicidoides taxa develop lasting ectoplasmic structures that cannot be retracted or resorbed. An ectoplasmic envelope surrounds their test and may protect the shell, e.g. versus carbonate aggressive bottom water conditions. Ectoplasmic roots likely anchor the specimens in areas of strong bottom water currents, trees enable them to elevate themselves above ground, and twigs stabilize and guide the retractable pseudopodial network.
Kumar Nimit
Biogeosciences, 18, 3631–3635, https://doi.org/10.5194/bg-18-3631-2021, https://doi.org/10.5194/bg-18-3631-2021, 2021
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The Indian Ocean Rim hosts many of the underdeveloped and emerging economies that depend on ocean resources for the livelihood of millions. Operational ocean information services cater to the requirements of resource managers and end-users to efficiently harness resources, mitigate threats and ensure safety. This paper outlines existing tools and explores the ongoing research that has the potential to convert the findings into operational services in the near- to midterm.
Finn Mielck, Rune Michaelis, H. Christian Hass, Sarah Hertel, Caroline Ganal, and Werner Armonies
Biogeosciences, 18, 3565–3577, https://doi.org/10.5194/bg-18-3565-2021, https://doi.org/10.5194/bg-18-3565-2021, 2021
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Marine sand mining is becoming more and more important to nourish fragile coastlines that face global change. We investigated the largest sand extraction site in the German Bight. The study reveals that after more than 35 years of mining, the excavation pits are still detectable on the seafloor while the sediment composition has largely changed. The organic communities living in and on the seafloor were strongly decimated, and no recovery is observable towards previous conditions.
France Van Wambeke, Elvira Pulido, Philippe Catala, Julie Dinasquet, Kahina Djaoudi, Anja Engel, Marc Garel, Sophie Guasco, Barbara Marie, Sandra Nunige, Vincent Taillandier, Birthe Zäncker, and Christian Tamburini
Biogeosciences, 18, 2301–2323, https://doi.org/10.5194/bg-18-2301-2021, https://doi.org/10.5194/bg-18-2301-2021, 2021
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Michaelis–Menten kinetics were determined for alkaline phosphatase, aminopeptidase and β-glucosidase in the Mediterranean Sea. Although the ectoenzymatic-hydrolysis contribution to heterotrophic prokaryotic needs was high in terms of N, it was low in terms of C. This study points out the biases in interpretation of the relative differences in activities among the three tested enzymes in regard to the choice of added concentrations of fluorogenic substrates.
Oscar E. Romero, Simon Ramondenc, and Gerhard Fischer
Biogeosciences, 18, 1873–1891, https://doi.org/10.5194/bg-18-1873-2021, https://doi.org/10.5194/bg-18-1873-2021, 2021
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Upwelling intensity along NW Africa varies on the interannual to decadal timescale. Understanding its changes is key for the prediction of future changes of CO2 sequestration in the northeastern Atlantic. Based on a multiyear (1988–2009) sediment trap experiment at the site CBmeso, fluxes and the species composition of the diatom assemblage are presented. Our data help in establishing the scientific basis for forecasting and modeling future states of this ecosystem and its decadal changes.
Katharine T. Bigham, Ashley A. Rowden, Daniel Leduc, and David A. Bowden
Biogeosciences, 18, 1893–1908, https://doi.org/10.5194/bg-18-1893-2021, https://doi.org/10.5194/bg-18-1893-2021, 2021
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Turbidity flows – underwater avalanches – are large-scale physical disturbances believed to have profound impacts on productivity and diversity of benthic communities in the deep sea. We reviewed published studies and found that current evidence for changes in productivity is ambiguous at best, but the influence on regional and local diversity is clearer. We suggest study design criteria that may lead to a better understanding of large-scale disturbance effects on deep-sea benthos.
Phillip Williamson, Hans-Otto Pörtner, Steve Widdicombe, and Jean-Pierre Gattuso
Biogeosciences, 18, 1787–1792, https://doi.org/10.5194/bg-18-1787-2021, https://doi.org/10.5194/bg-18-1787-2021, 2021
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The reliability of ocean acidification research was challenged in early 2020 when a high-profile paper failed to corroborate previously observed impacts of high CO2 on the behaviour of coral reef fish. We now know the reason why: the
replicatedstudies differed in many ways. Open-minded and collaborative assessment of all research results, both negative and positive, remains the best way to develop process-based understanding of the impacts of ocean acidification on marine organisms.
Cited articles
Ampou, E. E.: Caractérisation de la résilience des communautés benthiques récifales par analyse d'images à très haute résolution multi-sources: le cas du Parc National de Bunaken, Indonésie, PhD Dissertation; Université Paul Sabatier Toulouse, France, 2016.
Andréfouët, S., Pages, J., and Tartinville, B.: Water renewal time for classification of atoll lagoons in the Tuamotu Archipelago (French Polynesia), Coral Reefs, 20, 399–408, 2001.
Andréfouët, S., Ardhuin, F., Queffeulou, P., and Le Gendre, R.: Island shadow effects and the wave climate of the Western Tuamotu Archipelago (French Polynesia) inferred from altimetry and numerical model data, Mar. Poll. Bull., 65, 415–424, 2012.
Anthony, K. R. N. and Kerswell, A. P.: Coral mortality following extreme low tides and high solar radiation, Mar. Biol., 151, 1623–1631, 2007.
Babcock, R.: Reproduction and development of the blue coral Heliopora coerulea (Alcyonaria: Coenothecalia), Mar. Biol., 104, 475–481, 1990.
Baird, A. H., Pratchett, M. S., Hoey, A. S., Herdiana, Y., and Campbell, S. J.: Acanthaster planci is a major cause of coral mortality in Indonesia, Coral Reefs, 32, 803–812, 2013.
Baker, A. C., Glynn, P. W., and Riegl, B.: Climate change and coral reef bleaching: An ecological assessment of long-term impacts, recovery trends and future outlook, Estuar. Coast. Shelf S., 80, 435–471, 2008.
Birol, F. and Niño, F.: Ku- and Ka-band Altimeter Data in the Northwestern Mediterranean Sea: Impact on the Observation of the Coastal Ocean Variability, Mar. Geod., 38, 313–327, https://doi.org/10.1080/01490419.2015.1034814, 2015.
Brown, B. E.: Adaptations of reef corals to physical environmental stress, Adv. Mar. Biol., 31, 221–299, 1997.
Brown, B. E., Dunne, R. P., Scoffin, T. P., and LeTessier, M. D. A.: Solar damage in intertidal corals, Mar. Ecol. Prog. Ser., 105, 219–230, 1994.
Burrage, D. M., Steinberg, C. R., Mason, L. B., and Bode, L.: Tidal corrections for TOPEX altimetry in the Coral Sea and Great Barrier Reef Lagoon: Comparisons with long-term tide gauge records, J. Geophys. Res., 108, 3241, https://doi.org/10.1029/2000JC000441, 2003.
Caldwell, P. C., Merrfield, M. A., and Thompson, P. R.: Sea level measured by tide gauges from global oceans – the Joint Archive for Sea Level holdings (NCEI Accession 0019568), Version 5.5, NOAA National Centers for Environmental Information, Dataset, https://doi.org/10.7289/V5V40S7W, 2015.
Christie, M. R., Tissot, B. N., Albins, M. A., Beets, J. P., Jia, Y., Ortiz, D. M., Thompson, S. E., and Hixon, M. A.: Larval Connectivity in an Effective Network of Marine Protected Areas, PlosOne, 5, e15715, https://doi.org/10.1371/journal.pone.0015715, 2010.
English, S., Wilkinson, C., and Baker, V.: Survey Manual for Tropical Marine Resources, 2nd edition, ASEAN. ed. Australia Marine Science Project, Living Coastal Resources, Australian Institute of Marine Science, Townsville, Australia, 1997.
Fenoglio-Marc, L., Schone, T., Illigner, J., Becker, M., Manurung, P., and Khafid: Sea level change and vertical motion from satellite altimetry, tide gauges and GPS in the Indonesian region, Mar. Geod., 35, 137–150, 2012.
Gallop, S. L., Young, I. R., Ranasinghe, R., Durrant, T. H., and Haigh, I. D.: The large-scale influence of the Great Barrier Reef matrix on wave attenuation, Coral Reefs, 33, 1167–1178, 2014.
Glynn, P. W.: El Nino-Southern Oscillation mass mortalities of reef corals; a model of high temperature marine extinctions?, Geol. Soc. Spec. Publ., 178, 117–133, 2000.
Goodwin, I. and Harvey, N.: Subtropical sea-level history from coral microatolls in the Southern Cook Islands, since 300 AD, Mar. Geol., 253, 14–25, 2008.
Guest, J. R., Baird, A. H., Maynard, J. A., Muttaqin, E., Edwards, A. J., Campbell, S. J., Yewdall, K., Affendi, Y. A., and Chou, L. M.: Contrasting patterns of coral bleaching susceptibility in 2010 suggest an adaptive response to thermal stress, PlosOne, 7, e33353, https://doi.org/10.1371/journal.pone.0033353, 2012.
Hoegh-Guldberg, O.: Climate change, coral bleaching and the future of the world's coral reefs, Mar. Freshwater Res., 50, 839–866, 1999.
Hoeksema, B.: Delineation of the Indo-Malayan centre of maximum marine biodiversity: The Coral Triangle, in: Biogeography, Time, and Place: Distributions, Barriers, and Islands, edited by: Renema, W., Springer, 117–178, 2007.
Hopley, D.: Climate change: impact of sea level rise on reef flat zonation and productivity, in: Encyclopedia of modern coral reefs. Structure, form and process, edited by: Hopley, D., Springer, Berlin, 2011.
Johan, O., Bengen, D. G., Zamani, N. P., Suharsono, Smith, D., Lusiastuti, A. M., and Sweet, M. J.: Microbial community of black band disease on infection, healthy, and dead part of scleractinian Montipora sp. colony at Seribu Islands, Indonesia, Indonesian Aquaculture Journal, 9, 1–11, 2014.
Lowe, R., Pivan, X., Falter, J., Symonds, G., and Gruber, R.: Rising sea levels will reduce extreme temperature variations in tide-dominated reef habitats, Science Advances, 2, e1600825, https://doi.org/10.1126/sciadv.1600825, 2016.
Luu, Q. H., Tkalich, P., and Tay, T. W.: Sea level trend and variability around Peninsular Malaysia, Ocean Sci., 11, 617–628, https://doi.org/10.5194/os-11-617-2015, 2015.
McPhaden, M. J.: El Niño and La Niña: Physical Mechanisms and Climate Impacts, in: The Impact of Environmental Variability on Ecological Systems, edited by Vasseur, D. A. and McCann, K. S., Springer, New York, 1–16, 2007.
Meltzner, A. J., Sieh, K., Abrams, M., Agnew, D. C., Hudnut, K. W., Avouac, J. P., and Natawidjaja, D. H.: Uplift and subsidence associated with the great Aceh-Andaman earthquake of 2004, J. Geophys. Res.-Sol. Ea., 111, B02407, https://doi.org/10.1029/2005JB003891, 2006.
Neumann, A. C. and Macintyre, I. G.: Reef response to sea level rise: keep-up, catch-up or give-up?, Proc. of the 5th Int. Coral Reef Congress, Tahiti, 3-105-110, 1985.
Ray, R., Egbert, G., and Erofeeva, S.: A brief overview of tides in the Indonesian Seas, Oceanography, 18, 74–79, 2005.
Schiermeier, Q.: Hunting the Godzilla El Niño, Nature, 526, 490–491, 2015.
Scopélitis, J., Andréfouët, S., Phinn, S., Done, T., and Chabanet, P.: Coral colonisation of a shallow reef flat in response to rising sea level: quantification from 35 years of remote sensing data at Heron Island, Australia, Coral Reefs, 30, 951–965, 2011.
Smithers, S. G. and Woodroffe, C. D.: Microatolls as sea-level indicators on a mid-ocean atoll, Mar. Geol., 168, 61–78, 2000.
Suharsono: Ecological and physiological implications of coral bleaching at Pari Island, Thousand Islands, Indonesia (Electronic Thesis or Dissertation), University of Newcastle Upon Tyne, 1990.
Tartinville, B. and Rancher, J.: Wave-induced flow over Mururoa atoll reef, J. Coastal Res., 16, 776–781, 2000.
Teneva, L., Karnauskas, M., Logan, C., Bianucci, L., Currie, J., and Kleypas, J.: Predicting coral bleaching hotspots: The role of regional variability in thermal stress and potential adaptation rates, Coral Reefs, 31, 1–12, 2012.
Torres-Pulliza, D., Wilson, J., Darmawan, A., Campbell, S., and Andréfouët, S.: Ecoregional scale seagrass mapping: A tool to support resilient MPA network design in the Coral Triangle, Ocean Coastal Management, 80, 55–64, 2013.
Verron, J., Sengenes, P., Lambin, J., Noubel, J., Steunou, N., Guillot, A., Picot, N., Coutin-Faye, S., Sharma, R., Gairola, R. M., Raghava Murthy, D. V. A., Richman, J. G., Griffin, D., Pascual, A., Rémy, F., and Gupta, P. K.: The SARAL/AltiKa Altimetry Satellite Mission, Mar. Geod., 38, 2–21, 2015.
Wouthuyzen, S., Abrar, M., and Lorwens, J.: Pengungkapan Kejadian Pemutihan Karang Tahun 2010 di Perairan Indonesia Melalui Analisis Suhu Permukaan Laut, Oseanologi Dan Limnol. Indones., 1, 305–327, 2015.
Yasuda, N., Abe, M., Takino, T., Kimura, M., Lian, C., Nagai, S., Nakano, Y., and Nadaoka, K.: Large-scale mono-clonal structure in the north peripheral population of blue coral, Heliopora coerulea, Mar. Genomics, 7, 33–35, 2012.
Short summary
The 2015–2016 El Niño was the strongest on record and has generated significant coral bleaching and mortality worldwide. In Indonesia, first signs of bleaching were reported in April 2016. However, we show that this El Niño has impacted Indonesian reefs since 2015 through a different process than temperature-induced bleaching. Another El Niño-induced process, sea level fall, is responsible for significant coral mortality on North Sulawesi shallow reefs, and probably throughout Indonesia.
The 2015–2016 El Niño was the strongest on record and has generated significant coral bleaching...
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