Articles | Volume 13, issue 5
https://doi.org/10.5194/bg-13-1647-2016
© Author(s) 2016. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
https://doi.org/10.5194/bg-13-1647-2016
© Author(s) 2016. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
Research article
| 
17 Mar 2016
Research article |
| 17 Mar 2016
Distribution of tetraether lipids in agricultural soils – differentiation between paddy and upland management
Cornelia Mueller-Niggemann
CORRESPONDING AUTHOR
Institute of Geosciences, Christian Albrechts University,
Kiel, Germany
Sri Rahayu Utami
Soil Science, Faculty of Agriculture, University of
Brawijaya, Malang, Indonesia
Anika Marxen
Department of Soil Physics, Helmholtz Centre for
Environmental Research UFZ, Halle (Saale), Germany
Kai Mangelsdorf
Helmholtz Centre Potsdam GFZ German Research Centre for
Geosciences, Section 3.2 Organic Geochemistry, Potsdam,
Germany
Thorsten Bauersachs
Institute of Geosciences, Christian Albrechts University,
Kiel, Germany
Lorenz Schwark
CORRESPONDING AUTHOR
Institute of Geosciences, Christian Albrechts University,
Kiel, Germany
WA-OIGC, Curtin University, Perth,
Australia
Related authors
No articles found.
Jonathan Obrist-Farner, Andreas Eckert, Peter M. J. Douglas, Liseth Perez, Alex Correa-Metrio, Bronwen L. Konecky, Thorsten Bauersachs, Susan Zimmerman, Stephanie Scheidt, Mark Brenner, Steffen Kutterolf, Jeremy Maurer, Omar Flores, Caroline M. Burberry, Anders Noren, Amy Myrbo, Matthew Lachniet, Nigel Wattrus, Derek Gibson, and the LIBRE scientific team
Sci. Dril., 32, 85–100, https://doi.org/10.5194/sd-32-85-2023, https://doi.org/10.5194/sd-32-85-2023, 2023
Short summary
Short summary
In August 2022, 65 scientists from 13 countries gathered in Antigua, Guatemala, for a workshop, co-funded by the US National Science Foundation and the International Continental Scientific Drilling Program. This workshop considered the potential of establishing a continental scientific drilling program in the Lake Izabal Basin, eastern Guatemala, with the goals of establishing a borehole observatory and investigating one of the longest continental records from the northern Neotropics.
Rodrigo Martínez-Abarca, Michelle Abstein, Frederik Schenk, David Hodell, Philipp Hoelzmann, Mark Brenner, Steffen Kutterolf, Sergio Cohuo, Laura Macario-González, Mona Stockhecke, Jason Curtis, Flavio S. Anselmetti, Daniel Ariztegui, Thomas Guilderson, Alexander Correa-Metrio, Thorsten Bauersachs, Liseth Pérez, and Antje Schwalb
Clim. Past, 19, 1409–1434, https://doi.org/10.5194/cp-19-1409-2023, https://doi.org/10.5194/cp-19-1409-2023, 2023
Short summary
Short summary
Lake Petén Itzá, northern Guatemala, is one of the oldest lakes in the northern Neotropics. In this study, we analyzed geochemical and mineralogical data to decipher the hydrological response of the lake to climate and environmental changes between 59 and 15 cal ka BP. We also compare the response of Petén Itzá with other regional records to discern the possible climate forcings that influenced them. Short-term climate oscillations such as Greenland interstadials and stadials are also detected.
Vann Smith, Sophie Warny, Kliti Grice, Bettina Schaefer, Michael T. Whalen, Johan Vellekoop, Elise Chenot, Sean P. S. Gulick, Ignacio Arenillas, Jose A. Arz, Thorsten Bauersachs, Timothy Bralower, François Demory, Jérôme Gattacceca, Heather Jones, Johanna Lofi, Christopher M. Lowery, Joanna Morgan, Noelia B. Nuñez Otaño, Jennifer M. K. O'Keefe, Katherine O'Malley, Francisco J. Rodríguez-Tovar, Lorenz Schwark, and the IODP–ICDP Expedition 364 Scientists
Clim. Past, 16, 1889–1899, https://doi.org/10.5194/cp-16-1889-2020, https://doi.org/10.5194/cp-16-1889-2020, 2020
Short summary
Short summary
A rare tropical record of the Paleocene–Eocene Thermal Maximum, a potential analog for future global warming, has been identified from post-impact strata in the Chicxulub crater. Multiproxy analysis has yielded evidence for increased humidity, increased pollen and fungi input, salinity stratification, bottom water anoxia, and sea surface temperatures up to 38 °C. Pollen and plant spore assemblages indicate a nearby diverse coastal shrubby tropical forest resilient to hyperthermal conditions.
Jan-Peter Duda, Volker Thiel, Thorsten Bauersachs, Helge Mißbach, Manuel Reinhardt, Nadine Schäfer, Martin J. Van Kranendonk, and Joachim Reitner
Biogeosciences, 15, 1535–1548, https://doi.org/10.5194/bg-15-1535-2018, https://doi.org/10.5194/bg-15-1535-2018, 2018
Short summary
Short summary
The origin of organic matter in the oldest rocks on Earth is commonly ambiguous (biotic vs. abiotic). This problem culminates in the case of hydrothermal chert veins that contain abundant organic matter. Here we demonstrate a microbial origin of kerogen embedded in a 3.5 Gyr old hydrothermal chert vein. We explain this finding with the large-scale redistribution of biomass by hydrothermal fluids, emphasizing the interplay between biological and abiological processes on the early Earth.
Ulrich Kotthoff, Jeroen Groeneveld, Jeanine L. Ash, Anne-Sophie Fanget, Nadine Quintana Krupinski, Odile Peyron, Anna Stepanova, Jonathan Warnock, Niels A. G. M. Van Helmond, Benjamin H. Passey, Ole Rønø Clausen, Ole Bennike, Elinor Andrén, Wojciech Granoszewski, Thomas Andrén, Helena L. Filipsson, Marit-Solveig Seidenkrantz, Caroline P. Slomp, and Thorsten Bauersachs
Biogeosciences, 14, 5607–5632, https://doi.org/10.5194/bg-14-5607-2017, https://doi.org/10.5194/bg-14-5607-2017, 2017
Short summary
Short summary
We present reconstructions of paleotemperature, paleosalinity, and paleoecology from the Little Belt (Site M0059) over the past ~ 8000 years and evaluate the applicability of numerous proxies. Conditions were lacustrine until ~ 7400 cal yr BP. A transition to brackish–marine conditions then occurred within ~ 200 years. Salinity proxies rarely allowed quantitative estimates but revealed congruent results, while quantitative temperature reconstructions differed depending on the proxies used.
E. Hassler, M. D. Corre, A. Tjoa, M. Damris, S. R. Utami, and E. Veldkamp
Biogeosciences, 12, 5831–5852, https://doi.org/10.5194/bg-12-5831-2015, https://doi.org/10.5194/bg-12-5831-2015, 2015
Short summary
Short summary
We found that in Indonesia, oil palm displayed reduced soil CO2 fluxes compared to forest and rubber plantations; this was mainly caused by reduced litter input. Furthermore, we measured reduced soil CH4 uptake in oil palm and rubber plantations compared to forest; this was due to a decrease in soil N availability in the converted land uses. Our study shows for the first time that differences in soil fertility control soil-atmosphere exchange of CO2 and CH4 in a tropical landscape.
T. Bauersachs, J. Rochelmeier, and L. Schwark
Biogeosciences, 12, 3741–3751, https://doi.org/10.5194/bg-12-3741-2015, https://doi.org/10.5194/bg-12-3741-2015, 2015
Related subject area
Biogeochemistry: Soils
Vegetation patterns associated with nutrient availability and supply in high-elevation tropical Andean ecosystems
Technical note: An open-source, low-cost system for continuous monitoring of low nitrate concentrations in soil and open water
Long-term fertilization increases soil but not plant or microbial N in a Chihuahuan Desert grassland
Factors controlling spatiotemporal variability of soil carbon accumulation and stock estimates in a tidal salt marsh
Moisture and temperature effects on the radiocarbon signature of respired carbon dioxide to assess stability of soil carbon in the Tibetan Plateau
Technical Note: A validated correction method to quantify organic and inorganic carbon in soils using Rock-Eval® thermal analysis
Non-mycorrhizal root-associated fungi increase soil C stocks and stability via diverse mechanisms
Nine years of warming and nitrogen addition in the Tibetan grassland promoted loss of soil organic carbon but did not alter the bulk change in chemical structure
Diverse organic carbon dynamics captured by radiocarbon analysis of distinct compound classes in a grassland soil
Soil priming effects and involved microbial community along salt gradients
Adjustments to the Rock-Eval® thermal analysis for soil organic and inorganic carbon quantification
Ecosystem-specific patterns and drivers of global reactive iron mineral-associated organic carbon
Dark septate endophytic fungi associated with pioneer grass inhabiting volcanic deposits and their functions in promoting plant growth
Global patterns and drivers of phosphorus fractions in natural soils
Reviews and syntheses: Iron – a driver of nitrogen bioavailability in soils?
The Effects of Land Use on Soil Carbon Stocks in the UK
How well does ramped thermal oxidation quantify the age distribution of soil carbon? Assessing thermal stability of physically and chemically fractionated soil organic matter
Differential temperature sensitivity of intracellular metabolic processes and extracellular soil enzyme activities
Mapping soil organic carbon fractions for Australia, their stocks, and uncertainty
Technical note: The recovery rate of free particulate organic matter from soil samples is strongly affected by the method of density fractionation
Deforestation for agriculture leads to soil warming and enhanced litter decomposition in subarctic soils
Temperature sensitivity of soil organic carbon respiration along a forested elevation gradient in the Rwenzori Mountains, Uganda
The influence of elevated CO2 and soil depth on rhizosphere activity and nutrient availability in a mature Eucalyptus woodland
The paradox of assessing greenhouse gases from soils for nature-based solutions
Management-induced changes in soil organic carbon on global croplands
Pore network modeling as a new tool for determining gas diffusivity in peat
Temperature sensitivity of dark CO2 fixation in temperate forest soils
Effects of precipitation seasonality, irrigation, vegetation cycle and soil type on enhanced weathering – modeling of cropland case studies across four sites
Stable isotope profiles of soil organic carbon in forested and grassland landscapes in the Lake Alaotra basin (Madagascar): insights in past vegetation changes
Reviews and syntheses: The promise of big diverse soil data, moving current practices towards future potential
Dynamics of rare earth elements and associated major and trace elements during Douglas-fir (Pseudotsuga menziesii) and European beech (Fagus sylvatica L.) litter degradation
To what extent can soil moisture and soil Cu contamination stresses affect nitrous species emissions? Estimation through calibration of a nitrification–denitrification model
Carbon, nitrogen, and phosphorus stoichiometry of organic matter in Swedish forest soils and its relationship with climate, tree species, and soil texture
Soil geochemistry as a driver of soil organic matter composition: insights from a soil chronosequence
Leaching of inorganic and organic phosphorus and nitrogen in contrasting beech forest soils – seasonal patterns and effects of fertilization
Age and chemistry of dissolved organic carbon reveal enhanced leaching of ancient labile carbon at the permafrost thaw zone
Soil organic carbon stabilization mechanisms and temperature sensitivity in old terraced soils
Effect of organic carbon addition on paddy soil organic carbon decomposition under different irrigation regimes
Soil profile connectivity can impact microbial substrate use, affecting how soil CO2 effluxes are controlled by temperature
Additional carbon inputs to reach a 4 per 1000 objective in Europe: feasibility and projected impacts of climate change based on Century simulations of long-term arable experiments
Cycling and retention of nitrogen in European beech (Fagus sylvatica L.) ecosystems under elevated fructification frequency
Mercury mobility, colloid formation and methylation in a polluted Fluvisol as affected by manure application and flooding–draining cycle
Simulating measurable ecosystem carbon and nitrogen dynamics with the mechanistically defined MEMS 2.0 model
Similar importance of edaphic and climatic factors for controlling soil organic carbon stocks of the world
Representing methane emissions from wet tropical forest soils using microbial functional groups constrained by soil diffusivity
Long-term bare-fallow soil fractions reveal thermo-chemical properties controlling soil organic carbon dynamics
Geochemical zones and environmental gradients for soils from the central Transantarctic Mountains, Antarctica
Age distribution, extractability, and stability of mineral-bound organic carbon in central European soils
Denitrification in soil as a function of oxygen availability at the microscale
Key drivers of pyrogenic carbon redistribution during a simulated rainfall event
Armando Molina, Veerle Vanacker, Oliver Chadwick, Santiago Zhiminaicela, Marife Corre, and Edzo Veldkamp
Biogeosciences, 21, 3075–3091, https://doi.org/10.5194/bg-21-3075-2024, https://doi.org/10.5194/bg-21-3075-2024, 2024
Short summary
Short summary
The tropical Andes contains unique landscapes where forest patches are surrounded by tussock grasses and cushion-forming plants. The aboveground vegetation composition informs us about belowground nutrient availability: patterns in plant-available nutrients resulted from strong biocycling of cations and removal of soil nutrients by plant uptake or leaching. Future changes in vegetation distribution will affect soil water and solute fluxes and the aquatic ecology of Andean rivers and lakes.
Sahiti Bulusu, Cristina Prieto García, Helen E. Dahlke, and Elad Levintal
Biogeosciences, 21, 3007–3013, https://doi.org/10.5194/bg-21-3007-2024, https://doi.org/10.5194/bg-21-3007-2024, 2024
Short summary
Short summary
Do-it-yourself hardware is a new way to improve measurement resolution. We present a low-cost, automated system for field measurements of low nitrate concentrations in soil porewater and open water bodies. All data hardware components cost USD 1100, which is much cheaper than other available commercial solutions. We provide the complete building guide to reduce technical barriers, which we hope will allow easier reproducibility and set up new soil and environmental monitoring applications.
Violeta Mendoza-Martinez, Scott L. Collins, and Jennie R. McLaren
Biogeosciences, 21, 2655–2667, https://doi.org/10.5194/bg-21-2655-2024, https://doi.org/10.5194/bg-21-2655-2024, 2024
Short summary
Short summary
We examine the impacts of multi-decadal nitrogen additions on a dryland ecosystem N budget, including the soil, microbial, and plant N pools. After 26 years, there appears to be little impact on the soil microbial or plant community and only minimal increases in N pools within the soil. While perhaps encouraging from a conservation standpoint, we calculate that greater than 95 % of the nitrogen added to the system is not retained and is instead either lost deeper in the soil or emitted as gas.
Sean Fettrow, Andrew Wozniak, Holly A. Michael, and Angelia L. Seyfferth
Biogeosciences, 21, 2367–2384, https://doi.org/10.5194/bg-21-2367-2024, https://doi.org/10.5194/bg-21-2367-2024, 2024
Short summary
Short summary
Salt marshes play a big role in global carbon (C) storage, and C stock estimates are used to predict future changes. However, spatial and temporal gradients in C burial rates over the landscape exist due to variations in water inundation, dominant plant species and stage of growth, and tidal action. We quantified soil C concentrations in soil cores across time and space beside several porewater biogeochemical variables and discussed the controls on variability in soil C in salt marsh ecosystems.
Andrés Tangarife-Escobar, Georg Guggenberger, Xiaojuan Feng, Guohua Dai, Carolina Urbina-Malo, Mina Azizi-Rad, and Carlos A. Sierra
Biogeosciences, 21, 1277–1299, https://doi.org/10.5194/bg-21-1277-2024, https://doi.org/10.5194/bg-21-1277-2024, 2024
Short summary
Short summary
Soil organic matter stability depends on future temperature and precipitation scenarios. We used radiocarbon (14C) data and model predictions to understand how the transit time of carbon varies under environmental change in grasslands and peatlands. Soil moisture affected the Δ14C of peatlands, while temperature did not have any influence. Our models show the correspondence between Δ14C and transit time and could allow understanding future interactions between terrestrial and atmospheric carbon
Marija Stojanova, Pierre Arbelet, François Baudin, Nicolas Bouton, Giovanni Caria, Lorenza Pacini, Nicolas Proix, Edouard Quibel, Achille Thin, and Pierre Barré
EGUsphere, https://doi.org/10.5194/egusphere-2024-578, https://doi.org/10.5194/egusphere-2024-578, 2024
Short summary
Short summary
Because of its importance for climate regulation and soil health, many studies are focusing on carbon dynamics in soils. However, quantifying organic and inorganic carbon remains an issue in carbonated soils. In this technical note, we propose a validated correction method to quantify organic and inorganic carbon in soils using Rock-Eval® thermal analysis. With this correction, Rock-Eval® method has the potential to become the standard method for quantifying carbon in carbonate soils.
Emiko K. Stuart, Laura Castañeda-Gómez, Wolfram Buss, Jeff R. Powell, and Yolima Carrillo
Biogeosciences, 21, 1037–1059, https://doi.org/10.5194/bg-21-1037-2024, https://doi.org/10.5194/bg-21-1037-2024, 2024
Short summary
Short summary
We inoculated wheat plants with various types of fungi whose impacts on soil carbon are poorly understood. After several months of growth, we examined both their impacts on soil carbon and the underlying mechanisms using multiple methods. Overall the fungi benefitted the storage of carbon in soil, mainly by improving the stability of pre-existing carbon, but several pathways were involved. This study demonstrates their importance for soil carbon storage and, therefore, climate change mitigation.
Huimin Sun, Michael W. I. Schmidt, Jintao Li, Jinquan Li, Xiang Liu, Nicholas O. E. Ofiti, Shurong Zhou, and Ming Nie
Biogeosciences, 21, 575–589, https://doi.org/10.5194/bg-21-575-2024, https://doi.org/10.5194/bg-21-575-2024, 2024
Short summary
Short summary
A soil organic carbon (SOC) molecular structure suggested that the easily decomposable and stabilized SOC is similarly affected after 9-year warming and N treatments despite large changes in SOC stocks. Given the long residence time of some SOC, the similar loss of all measurable chemical forms of SOC under global change treatments could have important climate consequences.
Katherine E. Grant, Marisa N. Repasch, Kari M. Finstad, Julia D. Kerr, Maxwell A. T. Marple, Christopher J. Larson, Taylor A. B. Broek, Jennifer Pett-Ridge, and Karis J. McFarlane
EGUsphere, https://doi.org/10.5194/egusphere-2023-3125, https://doi.org/10.5194/egusphere-2023-3125, 2024
Short summary
Short summary
Soils store organic carbon composed of different compounds from plants and microbes that stays in the soils for different lengths of time. To understand this process, we measure the time each carbon fraction is in a grassland soil profile. Our results show that the length of time each individual soil fraction is in our soil changes. Our approach allows a detailed look at the different components in soils. This study can help improve our understanding of soil dynamics.
Haoli Zhang, Doudou Chang, Zhifeng Zhu, Chunmei Meng, and Kaiyong Wang
Biogeosciences, 21, 1–11, https://doi.org/10.5194/bg-21-1-2024, https://doi.org/10.5194/bg-21-1-2024, 2024
Short summary
Short summary
Soil salinity mediates microorganisms and soil processes like soil organic carbon (SOC) cycling. We observed that negative priming effects at the early stages might be due to the preferential utilization of cottonseed meal. The positive priming that followed decreased with the increase in salinity.
Joséphine Hazera, David Sebag, Isabelle Kowalewski, Eric Verrecchia, Herman Ravelojaona, and Tiphaine Chevallier
Biogeosciences, 20, 5229–5242, https://doi.org/10.5194/bg-20-5229-2023, https://doi.org/10.5194/bg-20-5229-2023, 2023
Short summary
Short summary
This study adapts the Rock-Eval® protocol to quantify soil organic carbon (SOC) and soil inorganic carbon (SIC) on a non-pretreated soil aliquot. The standard protocol properly estimates SOC contents once the TOC parameter is corrected. However, it cannot complete the thermal breakdown of SIC amounts > 4 mg, leading to an underestimation of high SIC contents by the MinC parameter, even after correcting for this. Thus, the final oxidation isotherm is extended to 7 min to quantify any SIC amount.
Bo Zhao, Amin Dou, Zhiwei Zhang, Zhenyu Chen, Wenbo Sun, Yanli Feng, Xiaojuan Wang, and Qiang Wang
Biogeosciences, 20, 4761–4774, https://doi.org/10.5194/bg-20-4761-2023, https://doi.org/10.5194/bg-20-4761-2023, 2023
Short summary
Short summary
This study provided a comprehensive analysis of the spatial variability and determinants of Fe-bound organic carbon (Fe-OC) among terrestrial, wetland, and marine ecosystems and its governing factors globally. We illustrated that reactive Fe was not only an important sequestration mechanism for OC in terrestrial ecosystems but also an effective “rusty sink” of OC preservation in wetland and marine ecosystems, i.e., a key factor for long-term OC storage in global ecosystems.
Han Sun, Tomoyasu Nishizawa, Hiroyuki Ohta, and Kazuhiko Narisawa
Biogeosciences, 20, 4737–4749, https://doi.org/10.5194/bg-20-4737-2023, https://doi.org/10.5194/bg-20-4737-2023, 2023
Short summary
Short summary
In this research, we assessed the diversity and function of the dark septate endophytic (DSE) fungi community associated with Miscanthus condensatus root in volcanic ecosystems. Both metabarcoding and isolation were adopted in this study. We further validated effects on plant growth by inoculation of some core DSE isolates. This study helps improve our understanding of the role of Miscanthus condensatus-associated DSE fungi during the restoration of post-volcanic ecosystems.
Xianjin He, Laurent Augusto, Daniel S. Goll, Bruno Ringeval, Ying-Ping Wang, Julian Helfenstein, Yuanyuan Huang, and Enqing Hou
Biogeosciences, 20, 4147–4163, https://doi.org/10.5194/bg-20-4147-2023, https://doi.org/10.5194/bg-20-4147-2023, 2023
Short summary
Short summary
We identified total soil P concentration as the most important predictor of all soil P pool concentrations, except for primary mineral P concentration, which is primarily controlled by soil pH and only secondarily by total soil P concentration. We predicted soil P pools’ distributions in natural systems, which can inform assessments of the role of natural P availability for ecosystem productivity, climate change mitigation, and the functioning of the Earth system.
Imane Slimani, Xia Zhu-Barker, Patricia Lazicki, and William Horwath
Biogeosciences, 20, 3873–3894, https://doi.org/10.5194/bg-20-3873-2023, https://doi.org/10.5194/bg-20-3873-2023, 2023
Short summary
Short summary
There is a strong link between nitrogen availability and iron minerals in soils. These minerals have multiple outcomes for nitrogen availability depending on soil conditions and properties. For example, iron can limit microbial degradation of nitrogen in aerated soils but has opposing outcomes in non-aerated soils. This paper focuses on the multiple ways iron can affect nitrogen bioavailability in soils.
Peter Levy, Laura Bentley, Bridget Emmett, Angus Garbutt, Aidan Keith, Inma Lebron, and David Robinson
EGUsphere, https://doi.org/10.5194/egusphere-2023-1681, https://doi.org/10.5194/egusphere-2023-1681, 2023
Short summary
Short summary
We collated a large data set (15790 soil cores) on soil carbon stock in different land uses. Soil carbon stocks were highest in woodlands and lowest in croplands. The variability in the effects were large. This has important implications for agri-environment schemes, seeking to sequester carbon in the soil by altering land use, because the effect of a given intervention is very hard to verify.
Shane W. Stoner, Marion Schrumpf, Alison Hoyt, Carlos A. Sierra, Sebastian Doetterl, Valier Galy, and Susan Trumbore
Biogeosciences, 20, 3151–3163, https://doi.org/10.5194/bg-20-3151-2023, https://doi.org/10.5194/bg-20-3151-2023, 2023
Short summary
Short summary
Soils store more carbon (C) than any other terrestrial C reservoir, but the processes that control how much C stays in soil, and for how long, are very complex. Here, we used a recent method that involves heating soil in the lab to measure the range of C ages in soil. We found that most C in soil is decades to centuries old, while some stays for much shorter times (days to months), and some is thousands of years old. Such detail helps us to estimate how soil C may react to changing climate.
Adetunji Alex Adekanmbi, Laurence Dale, Liz Shaw, and Tom Sizmur
Biogeosciences, 20, 2207–2219, https://doi.org/10.5194/bg-20-2207-2023, https://doi.org/10.5194/bg-20-2207-2023, 2023
Short summary
Short summary
The decomposition of soil organic matter and flux of carbon dioxide are expected to increase as temperatures rise. However, soil organic matter decomposition is a two-step process whereby large molecules are first broken down outside microbial cells and then respired within microbial cells. We show here that these two steps are not equally sensitive to increases in soil temperature and that global warming may cause a shift in the rate-limiting step from outside to inside the microbial cell.
Mercedes Román Dobarco, Alexandre M. J-C. Wadoux, Brendan Malone, Budiman Minasny, Alex B. McBratney, and Ross Searle
Biogeosciences, 20, 1559–1586, https://doi.org/10.5194/bg-20-1559-2023, https://doi.org/10.5194/bg-20-1559-2023, 2023
Short summary
Short summary
Soil organic carbon (SOC) is of a heterogeneous nature and varies in chemistry, stabilisation mechanisms, and persistence in soil. In this study we mapped the stocks of SOC fractions with different characteristics and turnover rates (presumably PyOC >= MAOC > POC) across Australia, combining spectroscopy and digital soil mapping. The SOC stocks (0–30 cm) were estimated as 13 Pg MAOC, 2 Pg POC, and 5 Pg PyOC.
Frederick Büks
Biogeosciences, 20, 1529–1535, https://doi.org/10.5194/bg-20-1529-2023, https://doi.org/10.5194/bg-20-1529-2023, 2023
Short summary
Short summary
Ultrasonication with density fractionation of soils is a commonly used method to separate soil organic matter pools, which is, e.g., important to calculate carbon turnover in landscapes. It is shown that the approach that merges soil and dense solution without mixing has a low recovery rate and causes co-extraction of parts of the retained labile pool along with the intermediate pool. An alternative method with high recovery rates and no cross-contamination was recommended.
Tino Peplau, Christopher Poeplau, Edward Gregorich, and Julia Schroeder
Biogeosciences, 20, 1063–1074, https://doi.org/10.5194/bg-20-1063-2023, https://doi.org/10.5194/bg-20-1063-2023, 2023
Short summary
Short summary
We buried tea bags and temperature loggers in a paired-plot design in soils under forest and agricultural land and retrieved them after 2 years to quantify the effect of land-use change on soil temperature and litter decomposition in subarctic agricultural systems. We could show that agricultural soils were on average 2 °C warmer than forests and that litter decomposition was enhanced. The results imply that deforestation amplifies effects of climate change on soil organic matter dynamics.
Joseph Okello, Marijn Bauters, Hans Verbeeck, Samuel Bodé, John Kasenene, Astrid Françoys, Till Engelhardt, Klaus Butterbach-Bahl, Ralf Kiese, and Pascal Boeckx
Biogeosciences, 20, 719–735, https://doi.org/10.5194/bg-20-719-2023, https://doi.org/10.5194/bg-20-719-2023, 2023
Short summary
Short summary
The increase in global and regional temperatures has the potential to drive accelerated soil organic carbon losses in tropical forests. We simulated climate warming by translocating intact soil cores from higher to lower elevations. The results revealed increasing temperature sensitivity and decreasing losses of soil organic carbon with increasing elevation. Our results suggest that climate warming may trigger enhanced losses of soil organic carbon from tropical montane forests.
Johanna Pihlblad, Louise C. Andresen, Catriona A. Macdonald, David S. Ellsworth, and Yolima Carrillo
Biogeosciences, 20, 505–521, https://doi.org/10.5194/bg-20-505-2023, https://doi.org/10.5194/bg-20-505-2023, 2023
Short summary
Short summary
Elevated CO2 in the atmosphere increases forest biomass productivity when growth is not limited by soil nutrients. This study explores how mature trees stimulate soil availability of nitrogen and phosphorus with free-air carbon dioxide enrichment after 5 years of fumigation. We found that both nutrient availability and processes feeding available pools increased in the rhizosphere, and phosphorus increased at depth. This appears to not be by decomposition but by faster recycling of nutrients.
Rodrigo Vargas and Van Huong Le
Biogeosciences, 20, 15–26, https://doi.org/10.5194/bg-20-15-2023, https://doi.org/10.5194/bg-20-15-2023, 2023
Short summary
Short summary
Quantifying the role of soils in nature-based solutions requires accurate estimates of soil greenhouse gas (GHG) fluxes. We suggest that multiple GHG fluxes should not be simultaneously measured at a few fixed time intervals, but an optimized sampling approach can reduce bias and uncertainty. Our results have implications for assessing GHG fluxes from soils and a better understanding of the role of soils in nature-based solutions.
Kristine Karstens, Benjamin Leon Bodirsky, Jan Philipp Dietrich, Marta Dondini, Jens Heinke, Matthias Kuhnert, Christoph Müller, Susanne Rolinski, Pete Smith, Isabelle Weindl, Hermann Lotze-Campen, and Alexander Popp
Biogeosciences, 19, 5125–5149, https://doi.org/10.5194/bg-19-5125-2022, https://doi.org/10.5194/bg-19-5125-2022, 2022
Short summary
Short summary
Soil organic carbon (SOC) has been depleted by anthropogenic land cover change and agricultural management. While SOC models often simulate detailed biochemical processes, the management decisions are still little investigated at the global scale. We estimate that soils have lost around 26 GtC relative to a counterfactual natural state in 1975. Yet, since 1975, SOC has been increasing again by 4 GtC due to a higher productivity, recycling of crop residues and manure, and no-tillage practices.
Petri Kiuru, Marjo Palviainen, Arianna Marchionne, Tiia Grönholm, Maarit Raivonen, Lukas Kohl, and Annamari Laurén
Biogeosciences, 19, 5041–5058, https://doi.org/10.5194/bg-19-5041-2022, https://doi.org/10.5194/bg-19-5041-2022, 2022
Short summary
Short summary
Peatlands are large carbon stocks. Emissions of carbon dioxide and methane from peatlands may increase due to changes in management and climate. We studied the variation in the gas diffusivity of peat with depth using pore network simulations and laboratory experiments. Gas diffusivity was found to be lower in deeper peat with smaller pores and lower pore connectivity. However, gas diffusivity was not extremely low in wet conditions, which may reflect the distinctive structure of peat.
Rachael Akinyede, Martin Taubert, Marion Schrumpf, Susan Trumbore, and Kirsten Küsel
Biogeosciences, 19, 4011–4028, https://doi.org/10.5194/bg-19-4011-2022, https://doi.org/10.5194/bg-19-4011-2022, 2022
Short summary
Short summary
Soils will likely become warmer in the future, and this can increase the release of carbon dioxide (CO2) into the atmosphere. As microbes can take up soil CO2 and prevent further escape into the atmosphere, this study compares the rate of uptake and release of CO2 at two different temperatures. With warming, the rate of CO2 uptake increases less than the rate of release, indicating that the capacity to modulate soil CO2 release into the atmosphere will decrease under future warming.
Giuseppe Cipolla, Salvatore Calabrese, Amilcare Porporato, and Leonardo V. Noto
Biogeosciences, 19, 3877–3896, https://doi.org/10.5194/bg-19-3877-2022, https://doi.org/10.5194/bg-19-3877-2022, 2022
Short summary
Short summary
Enhanced weathering (EW) is a promising strategy for carbon sequestration. Since models may help to characterize field EW, the present work applies a hydro-biogeochemical model to four case studies characterized by different rainfall seasonality, vegetation and soil type. Rainfall seasonality strongly affects EW dynamics, but low carbon sequestration suggests that an in-depth analysis at the global scale is required to see if EW may be effective to mitigate climate change.
Vao Fenotiana Razanamahandry, Marjolein Dewaele, Gerard Govers, Liesa Brosens, Benjamin Campforts, Liesbet Jacobs, Tantely Razafimbelo, Tovonarivo Rafolisy, and Steven Bouillon
Biogeosciences, 19, 3825–3841, https://doi.org/10.5194/bg-19-3825-2022, https://doi.org/10.5194/bg-19-3825-2022, 2022
Short summary
Short summary
In order to shed light on possible past vegetation shifts in the Central Highlands of Madagascar, we measured stable isotope ratios of organic carbon in soil profiles along both forested and grassland hillslope transects in the Lake Alaotra region. Our results show that the landscape of this region was more forested in the past: soils in the C4-dominated grasslands contained a substantial fraction of C3-derived carbon, increasing with depth.
Katherine E. O. Todd-Brown, Rose Z. Abramoff, Jeffrey Beem-Miller, Hava K. Blair, Stevan Earl, Kristen J. Frederick, Daniel R. Fuka, Mario Guevara Santamaria, Jennifer W. Harden, Katherine Heckman, Lillian J. Heran, James R. Holmquist, Alison M. Hoyt, David H. Klinges, David S. LeBauer, Avni Malhotra, Shelby C. McClelland, Lucas E. Nave, Katherine S. Rocci, Sean M. Schaeffer, Shane Stoner, Natasja van Gestel, Sophie F. von Fromm, and Marisa L. Younger
Biogeosciences, 19, 3505–3522, https://doi.org/10.5194/bg-19-3505-2022, https://doi.org/10.5194/bg-19-3505-2022, 2022
Short summary
Short summary
Research data are becoming increasingly available online with tantalizing possibilities for reanalysis. However harmonizing data from different sources remains challenging. Using the soils community as an example, we walked through the various strategies that researchers currently use to integrate datasets for reanalysis. We find that manual data transcription is still extremely common and that there is a critical need for community-supported informatics tools like vocabularies and ontologies.
Alessandro Montemagno, Christophe Hissler, Victor Bense, Adriaan J. Teuling, Johanna Ziebel, and Laurent Pfister
Biogeosciences, 19, 3111–3129, https://doi.org/10.5194/bg-19-3111-2022, https://doi.org/10.5194/bg-19-3111-2022, 2022
Short summary
Short summary
We investigated the biogeochemical processes that dominate the release and retention of elements (nutrients and potentially toxic elements) during litter degradation. Our results show that toxic elements are retained in the litter, while nutrients are released in solution during the first stages of degradation. This seems linked to the capability of trees to distribute the elements between degradation-resistant and non-degradation-resistant compounds of leaves according to their chemical nature.
Laura Sereni, Bertrand Guenet, Charlotte Blasi, Olivier Crouzet, Jean-Christophe Lata, and Isabelle Lamy
Biogeosciences, 19, 2953–2968, https://doi.org/10.5194/bg-19-2953-2022, https://doi.org/10.5194/bg-19-2953-2022, 2022
Short summary
Short summary
This study focused on the modellisation of two important drivers of soil greenhouse gas emissions: soil contamination and soil moisture change. The aim was to include a Cu function in the soil biogeochemical model DNDC for different soil moisture conditions and then to estimate variation in N2O, NO2 or NOx emissions. Our results show a larger effect of Cu on N2 and N2O emissions than on the other nitrogen species and a higher effect for the soils incubated under constant constant moisture.
Marie Spohn and Johan Stendahl
Biogeosciences, 19, 2171–2186, https://doi.org/10.5194/bg-19-2171-2022, https://doi.org/10.5194/bg-19-2171-2022, 2022
Short summary
Short summary
We explored the ratios of carbon (C), nitrogen (N), and phosphorus (P) of organic matter in Swedish forest soils. The N : P ratio of the organic layer was most strongly related to the mean annual temperature, while the C : N ratios of the organic layer and mineral soil were strongly related to tree species even in the subsoil. The organic P concentration in the mineral soil was strongly affected by soil texture, which diminished the effect of tree species on the C to organic P (C : OP) ratio.
Moritz Mainka, Laura Summerauer, Daniel Wasner, Gina Garland, Marco Griepentrog, Asmeret Asefaw Berhe, and Sebastian Doetterl
Biogeosciences, 19, 1675–1689, https://doi.org/10.5194/bg-19-1675-2022, https://doi.org/10.5194/bg-19-1675-2022, 2022
Short summary
Short summary
The largest share of terrestrial carbon is stored in soils, making them highly relevant as regards global change. Yet, the mechanisms governing soil carbon stabilization are not well understood. The present study contributes to a better understanding of these processes. We show that qualitative changes in soil organic matter (SOM) co-vary with alterations of the soil matrix following soil weathering. Hence, the type of SOM that is stabilized in soils might change as soils develop.
Jasmin Fetzer, Emmanuel Frossard, Klaus Kaiser, and Frank Hagedorn
Biogeosciences, 19, 1527–1546, https://doi.org/10.5194/bg-19-1527-2022, https://doi.org/10.5194/bg-19-1527-2022, 2022
Short summary
Short summary
As leaching is a major pathway of nitrogen and phosphorus loss in forest soils, we investigated several potential drivers in two contrasting beech forests. The composition of leachates, obtained by zero-tension lysimeters, varied by season, and climatic extremes influenced the magnitude of leaching. Effects of nitrogen and phosphorus fertilization varied with soil nutrient status and sorption properties, and leaching from the low-nutrient soil was more sensitive to environmental factors.
Karis J. McFarlane, Heather M. Throckmorton, Jeffrey M. Heikoop, Brent D. Newman, Alexandra L. Hedgpeth, Marisa N. Repasch, Thomas P. Guilderson, and Cathy J. Wilson
Biogeosciences, 19, 1211–1223, https://doi.org/10.5194/bg-19-1211-2022, https://doi.org/10.5194/bg-19-1211-2022, 2022
Short summary
Short summary
Planetary warming is increasing seasonal thaw of permafrost, making this extensive old carbon stock vulnerable. In northern Alaska, we found more and older dissolved organic carbon in small drainages later in summer as more permafrost was exposed by deepening thaw. Younger and older carbon did not differ in chemical indicators related to biological lability suggesting this carbon can cycle through aquatic systems and contribute to greenhouse gas emissions as warming increases permafrost thaw.
Pengzhi Zhao, Daniel Joseph Fallu, Sara Cucchiaro, Paolo Tarolli, Clive Waddington, David Cockcroft, Lisa Snape, Andreas Lang, Sebastian Doetterl, Antony G. Brown, and Kristof Van Oost
Biogeosciences, 18, 6301–6312, https://doi.org/10.5194/bg-18-6301-2021, https://doi.org/10.5194/bg-18-6301-2021, 2021
Short summary
Short summary
We investigate the factors controlling the soil organic carbon (SOC) stability and temperature sensitivity of abandoned prehistoric agricultural terrace soils. Results suggest that the burial of former topsoil due to terracing provided an SOC stabilization mechanism. Both the soil C : N ratio and SOC mineral protection regulate soil SOC temperature sensitivity. However, which mechanism predominantly controls SOC temperature sensitivity depends on the age of the buried terrace soils.
Heleen Deroo, Masuda Akter, Samuel Bodé, Orly Mendoza, Haichao Li, Pascal Boeckx, and Steven Sleutel
Biogeosciences, 18, 5035–5051, https://doi.org/10.5194/bg-18-5035-2021, https://doi.org/10.5194/bg-18-5035-2021, 2021
Short summary
Short summary
We assessed if and how incorporation of exogenous organic carbon (OC) such as straw could affect decomposition of native soil organic carbon (SOC) under different irrigation regimes. Addition of exogenous OC promoted dissolution of native SOC, partly because of increased Fe reduction, leading to more net release of Fe-bound SOC. Yet, there was no proportionate priming of SOC-derived DOC mineralisation. Water-saving irrigation can retard both priming of SOC dissolution and mineralisation.
Frances A. Podrebarac, Sharon A. Billings, Kate A. Edwards, Jérôme Laganière, Matthew J. Norwood, and Susan E. Ziegler
Biogeosciences, 18, 4755–4772, https://doi.org/10.5194/bg-18-4755-2021, https://doi.org/10.5194/bg-18-4755-2021, 2021
Short summary
Short summary
Soil respiration is a large and temperature-responsive flux in the global carbon cycle. We found increases in microbial use of easy to degrade substrates enhanced the temperature response of respiration in soils layered as they are in situ. This enhanced response is consistent with soil composition differences in warm relative to cold climate forests. These results highlight the importance of the intact nature of soils rarely studied in regulating responses of CO2 fluxes to changing temperature.
Elisa Bruni, Bertrand Guenet, Yuanyuan Huang, Hugues Clivot, Iñigo Virto, Roberta Farina, Thomas Kätterer, Philippe Ciais, Manuel Martin, and Claire Chenu
Biogeosciences, 18, 3981–4004, https://doi.org/10.5194/bg-18-3981-2021, https://doi.org/10.5194/bg-18-3981-2021, 2021
Short summary
Short summary
Increasing soil organic carbon (SOC) stocks is beneficial for climate change mitigation and food security. One way to enhance SOC stocks is to increase carbon input to the soil. We estimate the amount of carbon input required to reach a 4 % annual increase in SOC stocks in 14 long-term agricultural experiments around Europe. We found that annual carbon input should increase by 43 % under current temperature conditions, by 54 % for a 1 °C warming scenario and by 120 % for a 5 °C warming scenario.
Rainer Brumme, Bernd Ahrends, Joachim Block, Christoph Schulz, Henning Meesenburg, Uwe Klinck, Markus Wagner, and Partap K. Khanna
Biogeosciences, 18, 3763–3779, https://doi.org/10.5194/bg-18-3763-2021, https://doi.org/10.5194/bg-18-3763-2021, 2021
Short summary
Short summary
In order to study the fate of litter nitrogen in forest soils, we combined a leaf litterfall exchange experiment using 15N-labeled leaf litter with long-term element budgets at seven European beech sites in Germany. It appears that fructification intensity, which has increased in recent decades, has a distinct impact on N retention in forest soils. Despite reduced nitrogen deposition, about 6 and 10 kg ha−1 of nitrogen were retained annually in the soils and in the forest stands, respectively.
Lorenz Gfeller, Andrea Weber, Isabelle Worms, Vera I. Slaveykova, and Adrien Mestrot
Biogeosciences, 18, 3445–3465, https://doi.org/10.5194/bg-18-3445-2021, https://doi.org/10.5194/bg-18-3445-2021, 2021
Short summary
Short summary
Our incubation experiment shows that flooding of polluted floodplain soils may induce pulses of both mercury (Hg) and methylmercury to the soil solution and threaten downstream ecosystems. We demonstrate that mobilization of Hg bound to manganese oxides is a relevant process in organic-matter-poor soils. Addition of organic amendments accelerates this mobilization but also facilitates the formation of nanoparticulate Hg and the subsequent fixation of Hg from soil solution to the soil.
Yao Zhang, Jocelyn M. Lavallee, Andy D. Robertson, Rebecca Even, Stephen M. Ogle, Keith Paustian, and M. Francesca Cotrufo
Biogeosciences, 18, 3147–3171, https://doi.org/10.5194/bg-18-3147-2021, https://doi.org/10.5194/bg-18-3147-2021, 2021
Short summary
Short summary
Soil organic matter (SOM) is essential for the health of soils, and the accumulation of SOM helps removal of CO2 from the atmosphere. Here we present the result of the continued development of a mathematical model that simulates SOM and its measurable fractions. In this study, we simulated several grassland sites in the US, and the model generally captured the carbon and nitrogen amounts in SOM and their distribution between the measurable fractions throughout the entire soil profile.
Zhongkui Luo, Raphael A. Viscarra-Rossel, and Tian Qian
Biogeosciences, 18, 2063–2073, https://doi.org/10.5194/bg-18-2063-2021, https://doi.org/10.5194/bg-18-2063-2021, 2021
Short summary
Short summary
Using the data from 141 584 whole-soil profiles across the globe, we disentangled the relative importance of biotic, climatic and edaphic variables in controlling global SOC stocks. The results suggested that soil properties and climate contributed similarly to the explained global variance of SOC in four sequential soil layers down to 2 m. However, the most important individual controls are consistently soil-related, challenging current climate-driven framework of SOC dynamics.
Debjani Sihi, Xiaofeng Xu, Mónica Salazar Ortiz, Christine S. O'Connell, Whendee L. Silver, Carla López-Lloreda, Julia M. Brenner, Ryan K. Quinn, Jana R. Phillips, Brent D. Newman, and Melanie A. Mayes
Biogeosciences, 18, 1769–1786, https://doi.org/10.5194/bg-18-1769-2021, https://doi.org/10.5194/bg-18-1769-2021, 2021
Short summary
Short summary
Humid tropical soils are important sources and sinks of methane. We used model simulation to understand how different kinds of microbes and observed soil moisture and oxygen dynamics contribute to production and consumption of methane along a wet tropical hillslope during normal and drought conditions. Drought alters the diffusion of oxygen and microbial substrates into and out of soil microsites, resulting in enhanced methane release from the entire hillslope during drought recovery.
Mathieu Chassé, Suzanne Lutfalla, Lauric Cécillon, François Baudin, Samuel Abiven, Claire Chenu, and Pierre Barré
Biogeosciences, 18, 1703–1718, https://doi.org/10.5194/bg-18-1703-2021, https://doi.org/10.5194/bg-18-1703-2021, 2021
Short summary
Short summary
Evolution of organic carbon content in soils could be a major driver of atmospheric greenhouse gas concentrations over the next century. Understanding factors controlling carbon persistence in soil is a challenge. Our study of unique long-term bare-fallow samples, depleted in labile organic carbon, helps improve the separation, evaluation and characterization of carbon pools with distinct residence time in soils and gives insight into the mechanisms explaining soil organic carbon persistence.
Melisa A. Diaz, Christopher B. Gardner, Susan A. Welch, W. Andrew Jackson, Byron J. Adams, Diana H. Wall, Ian D. Hogg, Noah Fierer, and W. Berry Lyons
Biogeosciences, 18, 1629–1644, https://doi.org/10.5194/bg-18-1629-2021, https://doi.org/10.5194/bg-18-1629-2021, 2021
Short summary
Short summary
Water-soluble salt and nutrient concentrations of soils collected along the Shackleton Glacier, Antarctica, show distinct geochemical gradients related to latitude, longitude, elevation, soil moisture, and distance from coast and glacier. Machine learning algorithms were used to estimate geochemical gradients for the region given the relationship with geography. Geography and surface exposure age drive salt and nutrient abundances, influencing invertebrate habitat suitability and biogeography.
Marion Schrumpf, Klaus Kaiser, Allegra Mayer, Günter Hempel, and Susan Trumbore
Biogeosciences, 18, 1241–1257, https://doi.org/10.5194/bg-18-1241-2021, https://doi.org/10.5194/bg-18-1241-2021, 2021
Short summary
Short summary
A large amount of organic carbon (OC) in soil is protected against decay by bonding to minerals. We studied the release of mineral-bonded OC by NaF–NaOH extraction and H2O2 oxidation. Unexpectedly, extraction and oxidation removed mineral-bonded OC at roughly constant portions and of similar age distributions, irrespective of mineral composition, land use, and soil depth. The results suggest uniform modes of interactions between OC and minerals across soils in quasi-steady state with inputs.
Lena Rohe, Bernd Apelt, Hans-Jörg Vogel, Reinhard Well, Gi-Mick Wu, and Steffen Schlüter
Biogeosciences, 18, 1185–1201, https://doi.org/10.5194/bg-18-1185-2021, https://doi.org/10.5194/bg-18-1185-2021, 2021
Short summary
Short summary
Total denitrification, i.e. N2O and (N2O + N2) fluxes, of repacked soil cores were analysed for different combinations of soils and water contents. Prediction accuracy of (N2O + N2) fluxes was highest with combined proxies for oxygen demand (CO2 flux) and oxygen supply (anaerobic soil volume fraction). Knowledge of denitrification completeness (product ratio) improved N2O predictions. Substitutions with cheaper proxies (soil organic matter, empirical diffusivity) reduced prediction accuracy.
Severin-Luca Bellè, Asmeret Asefaw Berhe, Frank Hagedorn, Cristina Santin, Marcus Schiedung, Ilja van Meerveld, and Samuel Abiven
Biogeosciences, 18, 1105–1126, https://doi.org/10.5194/bg-18-1105-2021, https://doi.org/10.5194/bg-18-1105-2021, 2021
Short summary
Short summary
Controls of pyrogenic carbon (PyC) redistribution under rainfall are largely unknown. However, PyC mobility can be substantial after initial rain in post-fire landscapes. We conducted a controlled simulation experiment on plots where PyC was applied on the soil surface. We identified redistribution of PyC by runoff and splash and vertical movement in the soil depending on soil texture and PyC characteristics (material and size). PyC also induced changes in exports of native soil organic carbon.
Cited articles
Aanderud, Z. T., Jones, S. E., Fierer, N., and Lennon, J. T.: Resuscitation
of the rare biosphere contributes to pulses of ecosystem activity, Front.
Microbiol., 6, 1–11, 2015.
Angel, R., Claus, P., and Conrad, R.: Methanogenic archaea are globally
ubiquitous in aerated soils and become active under wet anoxic conditions,
ISME J., 6, 847–862, 2012.
Awe, G. O., Reichert, J. M., and Wendroth, O. O.: Temporal variability and
covariance structures of soil temperature in a sugarcane field under
different management practices in southern Brazil, Soil Till. Res., 150,
93–106, 2015.
Ayari, A., Yang, H., and Xie, S.: Flooding impact on the distribution of
microbial tetraether lipids in paddy rice soil in China, Front. Earth Sci.,
7, 384–394, 2013.
Bannert, A., Mueller-Niggemann, C., Kleineidam, K., Wissing, L., Cao, Z. H.,
Schwark, L., and Schloter, M.: Comparison of lipid biomarker and gene
abundance characterizing the archaeal ammonia-oxidizing community in flooded
soils, Biol. Fert. Soils, 47, 839–843, 2011.
Bauersachs, T., Weidenbach, K., Schmitz, R. A., and Schwark, L.: Distribution of
glycerol ether lipids in halophilic, methanogenic and hyperthermophilic
archaea, Org. Geochem., 83–84, 101–108, 2015.
Bischoff, J., Mangelsdorf, K., Schwamborn, G., and Wagner, D.: Impact of
lake-level and climate changes on microbial communities in a terrestrial
permafrost sequence of the El'gygytgyn crater, Far East Russian Arctic,
Permafrost Periglac., 25, 107–116, 2014.
Blaga, C. I., Reichart, G. J., Heiri, O., and Sinninghe Damsté, J. S.:
Tetraether membrane lipid distributions in water-column particulate matter
and sediments: a study of 47 European lakes along a north-south transect, J.
Paleolimnol., 41, 523–540, 2009.
Blumenberg, M., Seifert, R., Reitner, J., Pape, T., and Michaelis, W.: Membrane
lipid patterns typify distinct anaerobic methanotrophic consortia,
P. Natl. Acad. Sci. USA, 101, 11111–11116, 2004.
Boetius, A., Ravenschlag, K., Schubert, C. J., Rickert, D.,
Widdel, F., Gleseke, A., Amann, R., Jørgensen, B. B.,
Witte, U., and Pfannkuche, O.: A marine
microbial consortium apparently mediating anaerobic oxidation methane,
Nature, 407, 623–626, 2000.
Cheng, Y. Q., Yang, L. Z., Cao, Z. H., Ci, E., and Yin, S.: Chronosequential
changes of selected pedogenic properties in paddy soils as compared with
non-paddy soils, Geoderma, 151, 31–41, 2009.
Coffinet, S., Huguet, A., Williamson, D., Fosse, C., and Derenne, S.: Potential
of GDGTs as a temperature proxy along an altitudinal transect at Mount
Rungwe (Tanzania), Org. Geochem., 68, 82–89, 2014.
Conrad, R.: Microbial ecology of methanogens and methanotrophs, Adv. Agron.,
96, 1–63, 2007.
De Jonge, C., Hopmans, E. C., Stadnitskaia, A., Rijpstra, W. I. C., Hofland, R.,
Tegelaar, E., and Sinninghe Damsté, J. S.: Identification of novel penta-
and hexamethylated branched glycerol dialkyl glycerol tetraethers in peat
using HPLC-MS2, GC-MS and GC-SMB-MS, Org. Geochem., 54, 78–82, 2013.
De Jonge, C., Hopmans, E. C., Zell, C. I., Kim, J. H., Schouten, S., and
Sinninghe Damsté, J. S.: Occurrence and abundance of 6-methyl branched
glycerol dialkyl glycerol tetraethers in soils: Implications for
palaeoclimate reconstruction, Geochim. Cosmochim. Ac., 141, 97–112, 2014.
Elling, F. J., Könneke, M., Mußmann, M., Greve, A., and Hinrichs,
K.-U.: Influence of temperature, pH, and salinity on membrane lipid
composition and TEX86 of marine planktonic thaumarchaeal isolates, Geochim.
Cosmochim. Ac., 171, 238–255, https://doi.org/10.1016/j.gca.2015.09.004,
2015.
Edit Committee of Chorography of Cixi County: Chorography of Cixi County,
Zhejiang, Peoples Express House, Hangzhou, 1992.
FAO: World agriculture: towards 2015/2030, An FAO perspective, edited by:
Bruinsma, J., Earthscan Publications Ltd, London, 2003.
Feng, L. H. and Bao, Y. X.: Impact of human activity on the estuary of the
Qiantang River and the reclamation of tidal flats and river regulation,
Environ. Geol., 49, 76–81, 2005.
Frostegård, Å., Bååth, E., and Tunlid, A.: Shifts in the
structure of soil microbial communities in limed forests as revealed by
phospholipid fatty acid analysis, Soil Biol. Biochem., 25, 723–730, 1993.
Heyng, A. M., Mayr, C., Lücke, A., Moschen, R., Wissel, H., Striewski, B., and
Bauersachs, T.: Middle and Late Holocene paleotemperatures reconstructed from
oxygen isotopes and GDGTs of sediments from Lake Pupuke, New Zealand, Quatern.
Int., 374, 3–14, 2015.
Hopmans, E. C., Schouten, S., Pancost, R. D., van der Meer, M. T. J., and
Sinninghe Damsté, J. S.: Analysis of intact tetraether lipids in archaeal
cell material and sediments by high performance liquid
chromatography/atmospheric pressure chemical ionization mass spectrometry,
Rapid Commun. Mass Sp.., 14, 585–589, 2000.
Hopmans, E. C., Weijers, J. W. H., Schefuß, E., Herfort, L., Sinninghe
Damsté, J. S., and Schouten S.: A novel proxy for terrestrial organic
matter in sediments based on branched and isoprenoid tetraether lipids,
Earth Planet. Sc. Lett., 224, 107–116, 2004.
Huguet, A., Fosse, C., Metzger, P., Fritsch, E., and Derenne, S.: Occurrence and
distribution of extractable glycerol dialkyl glycerol tetraethers in
podzols, Org. Geochem., 41, 291–301, 2010.
Huguet, A., Wiesenberg, G. L. B., Gocke, M., Fosse, C., and Derenne, S.: Branched
tetraether membrane lipids associated with rhizoliths in loess:
Rhizomicrobial overprinting of initial biomarker record, Org. Geochem., 43,
12–19, 2012.
Huguet, A., Grossi, V., Belmahdi, I., Fosse, C., and Derenne, S.: Archaeal and
bacterial tetraether lipids in tropical ponds with contrasted salinity
(Guadeloupe, French West Indies): Implications for tetraether-based
environmental proxies, Org. Geochem., 83–84, 158–169, 2015.
Husson, O.: Redox potential (Eh) and pH as drivers of
soil/plant/microorganism systems: a transdisciplinary overview pointing to
integrative opportunities for agronomy, Plant Soil, 362, 389–417, 2013.
Jiang, X., Hou, X., Zhou, X., Xin, X., Wright, A., and Jia, Z.: pH regulates key
players of nitrification in paddy soils, Soil Biol. Biochem., 81, 9–16,
2015.
Koga, Y. and Morii, H.: Recent advances in structural research on ether
lipids from archaea including comparative and physiological aspects,
Biosci. Biotech. Bioch., 69, 2019–2034, 2005.
Koga, Y., Morii, H., Akagawa-Matsushita, M., and Ohga, M.: Correlation of polar
lipid composition with 16S rRNA phylogeny in methanogens. Further analysis
of lipid component parts, Biosci. Biotech. Bioch., 62,
230–236, 1998.
Kögel-Knabner, I., Amelung, W., Cao, Z. H., Fiedler, S., Frenzel, P.,
Jahn, R., Kalbitz, K., Kölbl, A., and Schloter, M.: Biogeochemistry of paddy
soils, Geoderma, 157, 1–14, 2010.
Kölbl, A., Schad, P., Jahn, R., Amelung, W., Bannert, A., Cao, Z. H.,
Fiedler, S., Kalbitz, K., Lehndorff, E., Müller-Niggemann, C., Schloter, M.,
Schwark, L., Vogelsang, V., Wissing, L., and Kögel-Knabner, I.: Accelerated soil
formation due to paddy management on marshlands (Zhejiang Province, China),
Geoderma, 228–229, 67–89, 2014.
Klotzbücher, T., Marxen, A., Vetterlein, D., Schneiker, J., Türke,
M., van Sinh, N., Manh, N. H., van Chien, H., Marquez, L., Villareal, S.,
Bustamante, J. V., and Jahn, R.: Plant-available silicon in paddy soils as a
key factor for sustainable rice production in Southeast Asia, Basic Appl.
Ecol., https://doi.org/10.1016/j.baae.2014.08.002, in press, 2014.
Krüger, M., Meyerdierks, A., Glöckner, F. O., Amann, R., Widdel, F.,
Kube, M., Reinhardt, R., Kahnt, J., Böcher, R., Thauer, R. K., and Shima, S.: A
conspicuous nickel protein in microbial mats that oxidize methane
anaerobically, Nature, 426, 878–881, 2003.
Lal, R.: Soil carbon sequestration in China through agricultural
intensification, and restoration of degraded and desertified ecosystems,
Land Degrad. Dev., 13, 469–478, 2002.
Leininger, S., Urich, T., Schloter, M., Schwark, L., Qi, J., Nicol, G. W.,
Prosser, J. I., Schuster, S. C., and Schleper, C.: Archaea predominate among
ammonia-oxidizing prokaryotes in soils, Nature, 442, 806–809, 2006.
Liesack, W., Schnell, S., and Revsbech, N. P.: Microbiology of flooded rice
paddies, FEMS Microbiol. Rev., 24, 625–645, 2000.
Liu, W., Wang, H., Zhang, C. L., Liu, Z., and He, Y.: Distribution of glycerol
dialkyl glycerol tetraether lipids along an altitudinal transect on Mt.
Xiangpi, NE Qinghai-Tibetan Plateau, China, Org. Geochem., 57, 76–83, 2013.
Liu, Y., Wang, J., Liu, D., Li, Z., Zhang, G., Tao, Y., Xie, J., Pan, J., and
Chen, F.: Straw mulching reduces the harmful effects of extreme hydrological and
temperature conditions in citrus orchards, PLoS One, 9, e87094,
https://doi.org/10.1371/journal.pone.0087094, 2014.
Loomis, S. E., Russell, J. M., Heureux, A. M., D'Andrea, W. J., and Sinninghe
Damsté, J. S.: Seasonal variability of branched glycerol dialkyl glycerol
tetraethers (brGDGTs) in a temperate lake system, Geochim. Cosmochim. Ac.,
144, 173–187, 2014.
Mueller-Niggemann, C. and Schwark, L.: Chemotaxonomy and diagenesis of
aliphatic hydrocarbons in rice plants and soils from land reclamation areas
in the Zhejiang Province, China, Org. Geochem., 83–84, 215–226, 2015.
Mueller-Niggemann, C., Bannert, A., Schloter, M., Lehndorff, E., and Schwark,
L.: Intra- versus inter-site macroscale variation in biogeochemical
properties along a paddy soil chronosequence, Biogeosciences, 9, 1237–1251,
https://doi.org/10.5194/bg-9-1237-2012, 2012.
Naeher, S., Peterse, F., Smittenberg, R. H., Niemann, H., Zigah, P. K., and
Schubert, C. J.: Sources of glycerol dialkyl glycerol tetraethers (GDGTs) in
catchment soils, water column and sediments of Lake Rotsee (Switzerland) –
Implications for the application of GDGT-based proxies for lakes, Org.
Geochem., 66, 164–173, 2014.
Offre, P., Spang, A., and Schleper, C.: Archaea in Biogeochemical Cycles,
Annu. Rev. Microbiol., 67, 437–457, 2013.
Oppermann, B. I., Michaelis, W., Blumenberg, M., Frerichs, J., Schulz, H. M.,
Schippers, A., Beaubien, S. E., and Krüger, M.: Soil microbial community
changes as a result of long-term exposure to a natural CO2 vent,
Geochim. Cosmochim. Ac., 74, 2697–2716, 2010.
Oton, E. V., Quince, C., Nicol, G. W., Prosser, J. I., and Gubry-Rangin, C.:
Phylogenetic congruence and ecological coherence in terrestrial
Thaumarchaeota, ISME J., 10, 85–96, 2016.
Pancost, R. D., Hopmans, E. C., and Sinninghe Damsté, J. S.: Archaeal
lipids in mediterranean cold seeps: Molecular proxies for anaerobic methane
oxidation, Geochim. Cosmochim. Ac., 65, 1611–1627, 2001.
Pearson, A. and Ingalls, A. E.: Assessing the Use of Archaeal Lipids as
Marine Environmental Proxies, Annu. Rev. Earth Pl. Sc., 41, 359–384, 2013.
Pearson, A., Huang, Z., Ingalls, A. E., Romanek, C. S., Wiegel, J., Freeman,
K. H., Smittenberg, R. H., and Zhang, C. L.: Nonmarine crenarchaeol in Nevada
hot springs, Appl. Environ. Microb., 70, 5229–5237, 2004.
Pester, M., Rattei, T., Flechl, S., Gröngröft, A., Richter, A.,
Overmann, J., Reinhold-Hurek, B., Loy, A., and Wagner, M.: AmoA-based
consensus phylogeny of ammonia-oxidizing archaea and deep sequencing of amoA
genes from soils of four different geographic regions, Environ. Microbiol.,
14, 525–539, 2012.
Peterse, F., Schouten, S., van der Meer, J., van der Meer, M. T. J., and
Sinninghe Damsté, J. S.: Distribution of branched tetraether lipids in
geothermally heated soils: Implications for the MBT/CBT temperature proxy,
Org. Geochem., 40, 201–205, 2009a.
Peterse, F., Kim, J. H., Schouten, S., Kristensen, D. K., Koç, N., and
Sinninghe Damsté, J. S.: Constraints on the application of the MBT/CBT
palaeothermometer at high latitude environments (Svalbard, Norway), Org.
Geochem., 40, 692–699, 2009b.
Peterse, F., van der Meer, M. T. J., Schouten, S., Jia, G., Ossebaar, J.,
Blokker, J., and Sinninghe Damsté, J. S.: Assessment of soil n-alkane
δD and branched tetraether membrane lipid distributions as tools for
paleoelevation reconstruction, Biogeosciences, 6, 2799–2807,
https://doi.org/10.5194/bg-6-2799-2009, 2009c.
Peterse, F., van der Meer, J., Schouten, S., Weijers, J. W. H., Fierer, N.,
Jackson, R. B., Kim, J. H., and Sinninghe Damsté, J. S.: Revised
calibration of the MBT-CBT paleotemperature proxy based on branched
tetraether membrane lipids in surface soils, Geochim. Cosmochim. Ac., 96,
215–229, 2012.
Peterse, F., Moy, C. M., and Eglinton, T. I.: A laboratory experiment on the
behaviour of soil-derived core and intact polar GDGTs in aquatic
environments, Biogeosciences, 12, 933–943, https://doi.org/10.5194/bg-12-933-2015, 2015.
Pitcher, A., Schouten, S., and Sinninghe Damsté, J. S.: In situ
production of crenarchaeol in two California hot springs, Appl. Environ.
Microb., 75, 4443–4451, 2009.
Pitcher, A., Rychlik, N., Hopmans, E. C., Spieck, E., Rijpstra, W. I. C.,
Ossebaar, J., Schouten, S., Wagner, M., and Sinninghe Damsté, J. S.:
Crenarchaeol dominates the membrane lipids of Candidatus Nitrososphaera
gargensis, a thermophilic group I.1b Archaeon, ISME J., 4, 542–552, 2010.
Pitcher, A., Hopmans, E. C., Mosier, A. C., Park, S. J., Rhee, S. K.,
Francis, C. A., Schouten, S., and Sinninghe Damsté, J. S.: Core and
intact polar glycerol dibiphytanyl glycerol tetraether lipids of
ammonia-oxidizing Archaea enriched from marine and estuarine sediments, Appl.
Environ. Microb., 77, 3468–3477, 2011.
Reigstad, L. J., Richter, A., Daims, H., Urich, T., Schwark, L., and
Schleper, C.: Nitrification in terrestrial hot springs of Iceland and
Kamchatka, FEMS Microbiol. Ecol., 64, 167–174, 2008.
Sahrawat, K. L.: Fertility and organic matter in submerged rice soils, Curr.
Sci., 88, 735–739, 2005.
Schouten, S., Hopmans, E. C., Schefuß, E., and Sinninghe Damsté, J.
S.: Distributional variations in marine crenarchaeotal membrane lipids: A new
tool for reconstructing ancient sea water temperatures?, Earth Planet. Sc.
Lett., 204, 265–274, 2002.
Schouten, S., Huguet, C., Hopmans, E. C., Kienhuis, M. V. M., and Sinninghe
Damsté, J. S.: Analytical methodology for TEX86 paleothermometry by
high-performance liquid chromatography/atmospheric pressure chemical
ionization-mass spectrometry, Anal. Chem., 79, 2940–2944, 2007.
Schouten, S., Rijpstra, W. I. C., Durisch-Kaiser, E., Schubert, C. J., and
Sinninghe Damsté, J. S.: Distribution of glycerol dialkyl glycerol
tetraether lipids in the water column of Lake Tanganyika, Org. Geochem., 53,
34–37, 2012.
Schouten, S., Hopmans, E. C., and Sinninghe Damsté, J. S.: The organic
geochemistry of glycerol dialkyl glycerol tetraether lipids: A review, Org.
Geochem., 54, 19–61, 2013.
Seneviratne, S. I., Corti, T., Davin, E. L., Hirschi, M., Jaeger, E. B.,
Lehner, I., Orlowsky, B., and Teuling, A. J.: Investigating soil
moisture-climate interactions in a changing climate: A review, Earth-Sci.
Rev., 99, 125–161, 2010.
Serrano-Silva, N., Sarria-Guzmán, Y., Dendooven, L., and Luna-Guido, M.:
Methanogenesis and methanotrophy in soil: A review, Pedosphere, 24, 291–307,
2014.
Shima, S., Krueger, M., Weinert, T., Demmer, U., Kahnt, J., Thauer, R. K.,
and Ermler, U.: Structure of a methyl-coenzyme M reductase from Black Sea
mats that oxidize methane anaerobically, Nature, 481, 98–101, 2012.
Sinninghe Damsté, J. S., Hopmans, E. C., Pancost, R. D., Schouten, S.,
and Geenevasen, J. A. J.: Newly discovered non-isoprenoid glycerol dialkyl
glycerol tetraether lipids in sediments, Chem. Commun., 17, 1683–1684, 2000.
Sinninghe Damsté, J. S., Schouten, S., Hopmans, E. C., van Duien, A. C.
T., and Geenevasen, J. A. J.: Crenarchaeol: the characteristic core glycerol
dibiphytanyl glycerol tetraether membrane lipid of cosmopolitan pelagic
crenarchaeota, J. Lipid Res., 43, 1641–1651, 2002.
Sinninghe Damsté, J. S., Ossebaar, J., Schouten, S., and Verschuren, D.:
Altitudinal shifts in the branched tetraether lipid distribution in soil from
Mt. Kilimanjaro (Tanzania): Implications for the MBT/CBT continental
palaeothermometer, Org. Geochem., 39, 1072–1076, 2008.
Sinninghe Damsté, J. S., Rijpstra, W. I. C., Hopmans, E. C., Weijers, J.
W. H., Foesel, B. U., Overmann, J., and Dedysh, S. N.: 13,16-Dimethyl
octacosanedioic acid (iso-Diabolic Acid), a common membrane-spanning lipid of
Acidobacteria subdivisions 1 and 3, Appl. Environ. Microb., 77, 4147–4154,
2011.
Sinninghe Damsté, J. S., Rijpstra, W. I. C., Hopmans, E. C., Jung, M. Y.,
Kim, J. G., Rhee, S. K., Stieglmeier, M., and Schleper, C.: Intact polar and
core glycerol dibiphytanyl glycerol tetraether lipids of group I.1a and I.1b
Thaumarchaeota in soil, Appl. Environ. Microb., 78, 6866–6874, 2012.
Sinninghe Damsté, J. S., Rijpstra, W. I. C., Hopmans, E. C., Foesel, B.
U., Wüst, P. K., Overmann, J., Tank, M., Bryant, D. A., Dunfield, P. F.,
Houghton, K., and Stott, M. B.: Ether- and ester-bound iso-diabolic acid and
other lipids in members of Acidobacteria subdivision 4, Appl. Environ.
Microb., 80, 5207–5218, 2014.
Stahl, D. A. and de la Torre, J. R.: Physiology and diversity of
ammonia-oxidizing archaea, Annu. Rev. Microbiol., 66, 83–101, 2012.
Thauer, R. K., Kaster, A.-K., Seedorf, H., Buckel, W., and Hedderich, R.:
Methanogenic archaea: ecologically relevant differences in energy
conservation, Nat. Rev. Microbiol., 6, 579–591, 2008.
Tierney, J. E. and Russell, J. M.: Distributions of branched GDGTs in a
tropical lake system: Implications for lacustrine application of the MBT/CBT
paleoproxy, Org. Geochem., 40, 1032–1036, 2009.
Tierney, J. E., Schouten, S., Pitcher, A., Hopmans, E. C., and Sinninghe
Damsté, J. S.: Core and intact polar glycerol dialkyl glycerol
tetraethers (GDGTs) in Sand Pond, Warwick, Rhode Island (USA): Insights into
the origin of lacustrine GDGTs, Geochim. Cosmochim. Ac., 77, 561–581, 2012.
Villanueva, L., Damsté, J. S. S., and Schouten, S.: A re-evaluation of
the archaeal membrane lipid biosynthetic pathway, Nat. Rev. Microbiol., 12,
438–448, 2014.
Wang, H., Liu, W., Zhang, C. L., Liu, Z., and He, Y.: Branched and isoprenoid
tetraether (BIT) index traces water content along two marsh-soil transects
surrounding Lake Qinghai: Implications for paleo-humidity variation, Org.
Geochem., 59, 75–81, 2013.
Wang, H., Liu, W., and Zhang, C. L.: Dependence of the cyclization of
branched tetraethers on soil moisture in alkaline soils from arid-subhumid
China: implications for palaeorainfall reconstructions on the Chinese Loess
Plateau, Biogeosciences, 11, 6755–6768, https://doi.org/10.5194/bg-11-6755-2014, 2014.
Watanabe, T., Kimura, M., and Asakawa, S.: Community structure of
methanogenic archaea in paddy field soil under double cropping (rice-wheat),
Soil Biol. Biochem., 38, 1264–1274, 2006.
Watanabe, T., Kimura, M., and Asakawa, S.: Distinct members of a stable
methanogenic archaeal community transcribe mcrA genes under flooded and
drained conditions in Japanese paddy field soil, Soil Biol. Biochem., 41,
276–285, 2009.
Watanabe, T., Hosen, Y., Agbisit, R., Llorca, L., Katayanagi, N., Asakawa,
S., and Kimura, M.: Changes in community structure of methanogenic archaea
brought about by water-saving practice in paddy field soil, Soil Biol.
Biochem., 58, 235–243, 2013.
Weijers, J. W. H., Schouten, S., Hopmans, E. C., Geenevasen, J. A. J., David,
O. R. P., Coleman, J. M., Pancost, R. D., and Sinninghe Damsté, J. S.:
Membrane lipids of mesophilic anaerobic bacteria thriving in peats have
typical archaeal traits, Environ. Microbiol., 8, 648–657, 2006a.
Weijers, J. W. H., Schouten, S., Spaargaren, O. C., and Sinninghe Damsté,
J. S.: Occurrence and distribution of tetraether membrane lipids in soils:
Implications for the use of the TEX86 proxy and the BIT index, Org.
Geochem., 37, 1680–1693, 2006b.
Weijers, J. W. H., Schouten, S., van den Donker, J. C., Hopmans, E. C., and
Sinninghe Damsté, J. S.: Environmental controls on bacterial tetraether
membrane lipid distribution in soils, Geochim. Cosmochim. Ac., 71, 703–713,
2007.
Weijers, J. W. H., Panoto, E., van Bleijswijk, J., Schouten, S., Rijpstra, W.
I. C., Balk, M., Stams, A. J. M., and Sinninghe Damsté, J. S.:
Constraints on the biological source(s) of the orphan branched tetraether
membrane lipids, Geomicrobiol. J., 26, 402–414, 2009.
Weijers, J. W. H., Wiesenberg, G. L. B., Bol, R., Hopmans, E. C., and
Pancost, R. D.: Carbon isotopic composition of branched tetraether membrane
lipids in soils suggest a rapid turnover and a heterotrophic life style of
their source organism(s), Biogeosciences, 7, 2959–2973,
https://doi.org/10.5194/bg-7-2959-2010, 2010.
Wu, J.: Carbon accumulation in paddy ecosystems in subtropical China:
Evidence from landscape studies, Eur. J. Soil Sci., 62, 29–34, 2011.
Wuchter, C., Schouten, S., Coolen, M. J. L., and Sinninghe Damsté, J. S.:
Temperature-dependent variation in the distribution of tetraether membrane
lipids of marine Crenarchaeota: Implications for TEX 86 paleothermometry,
Paleoceanography, 19, PA4028, https://doi.org/10.1029/2004PA001041, 2004.
Xie, W., Zhang, C., and Ma, C.: Temporal variation in community structure and
lipid composition of Thaumarchaeota from subtropical soil: Insight into
proposing a new soil pH proxy, Org. Geochem., 83–84, 54–64,
https://doi.org/10.1016/j.orggeochem.2015.02.009, 2015.
Xiong, Z. Q., Xing, G. X., and Zhu, Z. L.: Nitrous oxide and methane
emissions as affected by water, soil and nitrogen, Pedosphere, 17, 146–155,
2007.
Yang, H., Pancost, R. D., Jia, C., and Xie, S.: The Response of Archaeal
Tetraether Membrane Lipids in Surface Soils to Temperature: A Potential
Paleothermometer in Paleosols, Geomicrobiol. J., 33, 98–109, 2016.
Zink, K.-G., Vandergoes, M. J., Mangelsdorf, K., Dieffenbacher-Krall, A. C.,
and Schwark, L.: Application of bacterial glycerol dialkyl glycerol
tetraethers (GDGTs) to develop modern and past temperature estimates from New
Zealand lakes, Org. Geochem., 41, 1060–1066, 2010.
Altmetrics
Final-revised paper
Preprint