Articles | Volume 10, issue 5
https://doi.org/10.5194/bg-10-3241-2013
© Author(s) 2013. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
Special issue:
https://doi.org/10.5194/bg-10-3241-2013
© Author(s) 2013. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
Reviews and syntheses
| 
14 May 2013
Reviews and syntheses |
| 14 May 2013
An overview of chemosynthetic symbioses in bivalves from the North Atlantic and Mediterranean Sea
S. Duperron
Université Pierre et Marie Curie, UMR7138 (UPMC CNRS IRD MNHN), Systématique, Adaptation, Evolution, 7, quai St. Bernard, bâtiment A, 75005 Paris, France
S. M. Gaudron
Université Pierre et Marie Curie, UMR7138 (UPMC CNRS IRD MNHN), Systématique, Adaptation, Evolution, 7, quai St. Bernard, bâtiment A, 75005 Paris, France
C. F. Rodrigues
Université Pierre et Marie Curie, UMR7138 (UPMC CNRS IRD MNHN), Systématique, Adaptation, Evolution, 7, quai St. Bernard, bâtiment A, 75005 Paris, France
Departamento de Biologia and CESAM, Universidade de Aveiro, Campus Universitário de Santiago, 3810-193 Aveiro, Portugal
M. R. Cunha
Departamento de Biologia and CESAM, Universidade de Aveiro, Campus Universitário de Santiago, 3810-193 Aveiro, Portugal
C. Decker
Laboratoire Environnement Profond, Département Etudes des Ecosystèmes Profonds, Centre Ifremer de Brest, BP 71, 29280 Plouzané, France
K. Olu
Laboratoire Environnement Profond, Département Etudes des Ecosystèmes Profonds, Centre Ifremer de Brest, BP 71, 29280 Plouzané, France
Related authors
No articles found.
Magdalini Christodoulou, Timothy O'Hara, Andrew F. Hugall, Sahar Khodami, Clara F. Rodrigues, Ana Hilario, Annemiek Vink, and Pedro Martinez Arbizu
Biogeosciences, 17, 1845–1876, https://doi.org/10.5194/bg-17-1845-2020, https://doi.org/10.5194/bg-17-1845-2020, 2020
Short summary
Short summary
Unexpectedly high diversity was revealed in areas licenced for polymetallic nodule mining exploration in the Pacific Ocean. For the first time, a comprehensive reference library including 287 novel ophiuroid sequences allocated to 43 species was produced. Differences in food availability along the nodule province of CCZ were reflected in the biodiversity patterns observed. The APEI3's dissimilarity with the exploration contract areas questions its ability to serve as a biodiversity reservoir.
Tanja Stratmann, Lidia Lins, Autun Purser, Yann Marcon, Clara F. Rodrigues, Ascensão Ravara, Marina R. Cunha, Erik Simon-Lledó, Daniel O. B. Jones, Andrew K. Sweetman, Kevin Köser, and Dick van Oevelen
Biogeosciences, 15, 4131–4145, https://doi.org/10.5194/bg-15-4131-2018, https://doi.org/10.5194/bg-15-4131-2018, 2018
Short summary
Short summary
Extraction of polymetallic nodules will have negative impacts on the deep-sea ecosystem, but it is not known whether the ecosystem is able to recover from them. Therefore, in 1989 a sediment disturbance experiment was conducted in the Peru Basin to mimic deep-sea mining. Subsequently, the experimental site was re-visited 5 times to monitor the recovery of fauna. We developed food-web models for all 5 time steps and found that, even after 26 years, carbon flow in the system differs significantly.
M. Portail, K. Olu, E. Escobar-Briones, J. C. Caprais, L. Menot, M. Waeles, P. Cruaud, P. M. Sarradin, A. Godfroy, and J. Sarrazin
Biogeosciences, 12, 5455–5479, https://doi.org/10.5194/bg-12-5455-2015, https://doi.org/10.5194/bg-12-5455-2015, 2015
Short summary
Short summary
The absence of biogeographic barrier between seep and vent ecosystems in the Guaymas Basin offers the opportunity to assess the role of environmental conditions in the distribution of macrofaunal communities. Our results showed that community structure was primarily shaped by common abiotic factors. In addition, a high number of common species were shared, suggesting frequent connections between the two ecosystems. Overall, this study supports the hypothesis of a continuum among vents and seeps.
L. Génio, A. Warén, F. L. Matos, and M. R. Cunha
Biogeosciences, 10, 5159–5170, https://doi.org/10.5194/bg-10-5159-2013, https://doi.org/10.5194/bg-10-5159-2013, 2013
M. R. Cunha, C. F. Rodrigues, L. Génio, A. Hilário, A. Ravara, and O. Pfannkuche
Biogeosciences, 10, 2553–2568, https://doi.org/10.5194/bg-10-2553-2013, https://doi.org/10.5194/bg-10-2553-2013, 2013
C. F. Rodrigues, A. Hilário, and M. R. Cunha
Biogeosciences, 10, 2569–2581, https://doi.org/10.5194/bg-10-2569-2013, https://doi.org/10.5194/bg-10-2569-2013, 2013
Related subject area
Biodiversity and Ecosystem Function: Marine
Multifactorial effects of warming, low irradiance, and low salinity on Arctic kelps
Early life stages of fish under ocean alkalinity enhancement in coastal plankton communities
Planktonic foraminifera assemblage composition and flux dynamics inferred from an annual sediment trap record in the central Mediterranean Sea
Reefal ostracod assemblages from the Zanzibar Archipelago (Tanzania)
Composite calcite and opal test in Foraminifera (Rhizaria)
Influence of oxygen minimum zone on macrobenthic community structure in the northern Benguela Upwelling System: a macro-nematode perspective
Phytoplankton adaptation to steady or changing environments affects marine ecosystem functioning
Simulated terrestrial runoff shifts the metabolic balance of a coastal Mediterranean plankton community towards heterotrophy
Contrasting carbon cycling in the benthic food webs between a river-fed, high-energy canyon and an upper continental slope
A critical trade-off between nitrogen quota and growth allows Coccolithus braarudii life cycle phases to exploit varying environment
Structural complexity and benthic metabolism: resolving the links between carbon cycling and biodiversity in restored seagrass meadows
Building your own mountain: the effects, limits, and drawbacks of cold-water coral ecosystem engineering
Phytoplankton response to increased nickel in the context of ocean alkalinity enhancement
Year-long benthic measurements of environmental conditions indicate high sponge biomass is related to strong bottom currents over the Northern Labrador shelf
Diversity and density relationships between lebensspuren and tracemaking organisms: a study case from abyssal northwest Pacific
Technical note: An autonomous flow-through salinity and temperature perturbation mesocosm system for multi-stressor experiments
Reviews and syntheses: The clam before the storm – a meta-analysis showing the effect of combined climate change stressors on bivalves
A step towards measuring connectivity in the deep sea: elemental fingerprints of mollusk larval shells discriminate hydrothermal vent sites
Seasonal foraging behavior of Weddell seals relation to oceanographic environmental conditions in the Ross Sea, Antarctica
Spawner weight and ocean temperature drive Allee effect dynamics in Atlantic cod, Gadus morhua: inherent and emergent density regulation
Bacterioplankton dark CO2 fixation in oligotrophic waters
The bottom mixed layer depth as an indicator of subsurface Chlorophyll a distribution
Ideas and perspectives: The fluctuating nature of oxygen shapes the ecology of aquatic habitats and their biogeochemical cycles – the aquatic oxyscape
Impact of deoxygenation and warming on global marine species in the 21st century
Ecological divergence of a mesocosm in an eastern boundary upwelling system assessed with multi-marker environmental DNA metabarcoding
Unique benthic foraminiferal communities (stained) in diverse environments of sub-Antarctic fjords, South Georgia
Upwelled plankton community modulates surface bloom succession and nutrient availability in a natural plankton assemblage
First phytoplankton community assessment of the Kong Håkon VII Hav, Southern Ocean, during austral autumn
Early life stages of a Mediterranean coral are vulnerable to ocean warming and acidification
Mediterranean seagrasses as carbon sinks: methodological and regional differences
Contrasting vertical distributions of recent planktic foraminifera off Indonesia during the southeast monsoon: implications for paleoceanographic reconstructions
The onset of the spring phytoplankton bloom in the coastal North Sea supports the Disturbance Recovery Hypothesis
Species richness and functional attributes of fish assemblages across a large-scale salinity gradient in shallow coastal areas
Modeling the growth and sporulation dynamics of the macroalga Ulva in mixed-age populations in cultivation and the formation of green tides
Spatial changes in community composition and food web structure of mesozooplankton across the Adriatic basin (Mediterranean Sea)
Predicting mangrove forest dynamics across a soil salinity gradient using an individual-based vegetation model linked with plant hydraulics
Will daytime community calcification reflect reef accretion on future, degraded coral reefs?
Modeling polar marine ecosystem functions guided by bacterial physiological and taxonomic traits
Quantifying functional consequences of habitat degradation on a Caribbean coral reef
Enhanced chlorophyll-a concentration in the wake of Sable Island, eastern Canada, revealed by two decades of satellite observations: a response to grey seal population dynamics?
Population dynamics and reproduction strategies of planktonic foraminifera in the open ocean
The Bouraké semi-enclosed lagoon (New Caledonia) – a natural laboratory to study the lifelong adaptation of a coral reef ecosystem to extreme environmental conditions
Atypical, high-diversity assemblages of foraminifera in a mangrove estuary in northern Brazil
Permanent ectoplasmic structures in deep-sea Cibicides and Cibicidoides taxa – long-term observations at in situ pressure
Ideas and perspectives: Ushering the Indian Ocean into the UN Decade of Ocean Science for Sustainable Development (UNDOSSD) through marine ecosystem research and operational services – an early career's take
Persistent effects of sand extraction on habitats and associated benthic communities in the German Bight
Spatial patterns of ectoenzymatic kinetics in relation to biogeochemical properties in the Mediterranean Sea and the concentration of the fluorogenic substrate used
A 2-decade (1988–2009) record of diatom fluxes in the Mauritanian coastal upwelling: impact of low-frequency forcing and a two-step shift in the species composition
Review and syntheses: Impacts of turbidity flows on deep-sea benthic communities
Ideas and perspectives: When ocean acidification experiments are not the same, repeatability is not tested
Anaïs Lebrun, Cale A. Miller, Marc Meynadier, Steeve Comeau, Pierre Urrutti, Samir Alliouane, Robert Schlegel, Jean-Pierre Gattuso, and Frédéric Gazeau
Biogeosciences, 21, 4605–4620, https://doi.org/10.5194/bg-21-4605-2024, https://doi.org/10.5194/bg-21-4605-2024, 2024
Short summary
Short summary
We tested the effects of warming, low salinity, and low irradiance on Arctic kelps. We show that growth rates were similar across species and treatments. Alaria esculenta is adapted to low-light conditions. Saccharina latissima exhibited nitrogen limitation, suggesting coastal erosion and permafrost thawing could be beneficial. Laminaria digitata did not respond to the treatments. Gene expression of Hedophyllum nigripes and S. latissima indicated acclimation to the experimental treatments.
Silvan Urs Goldenberg, Ulf Riebesell, Daniel Brüggemann, Gregor Börner, Michael Sswat, Arild Folkvord, Maria Couret, Synne Spjelkavik, Nicolás Sánchez, Cornelia Jaspers, and Marta Moyano
Biogeosciences, 21, 4521–4532, https://doi.org/10.5194/bg-21-4521-2024, https://doi.org/10.5194/bg-21-4521-2024, 2024
Short summary
Short summary
Ocean alkalinity enhancement (OAE) is being evaluated as a carbon dioxide removal technology for climate change mitigation. With an experiment on species communities, we show that larval and juvenile fish can be resilient to the resulting perturbation of seawater. Fish may hence recruit successfully and continue to support fisheries' production in regions of OAE. Our findings help to establish an environmentally safe operating space for this ocean-based solution.
Thibauld M. Béjard, Andrés S. Rigual-Hernández, Javier P. Tarruella, José-Abel Flores, Anna Sanchez-Vidal, Irene Llamas-Cano, and Francisco J. Sierro
Biogeosciences, 21, 4051–4076, https://doi.org/10.5194/bg-21-4051-2024, https://doi.org/10.5194/bg-21-4051-2024, 2024
Short summary
Short summary
The Mediterranean Sea is regarded as a climate change hotspot. Documenting the population of planktonic foraminifera is crucial. In the Sicily Channel, fluxes are higher during winter and positively linked with chlorophyll a concentration and cool temperatures. A comparison with other Mediterranean sites shows the transitional aspect of the studied zone. Finally, modern populations significantly differ from those in the sediment, highlighting a possible effect of environmental change.
Skye Yunshu Tian, Martin Langer, Moriaki Yasuhara, and Chih-Lin Wei
Biogeosciences, 21, 3523–3536, https://doi.org/10.5194/bg-21-3523-2024, https://doi.org/10.5194/bg-21-3523-2024, 2024
Short summary
Short summary
Through the first large-scale study of meiobenthic ostracods from the diverse and productive reef ecosystem in the Zanzibar Archipelago, Tanzania, we found that the diversity and composition of ostracod assemblages as controlled by benthic habitats and human impacts were indicative of overall reef health, and we highlighted the usefulness of ostracods as a model proxy to monitor and understand the degradation of reef ecosystems from the coral-dominated phase to the algae-dominated phase.
Julien Richirt, Satoshi Okada, Yoshiyuki Ishitani, Katsuyuki Uematsu, Akihiro Tame, Kaya Oda, Noriyuki Isobe, Toyoho Ishimura, Masashi Tsuchiya, and Hidetaka Nomaki
Biogeosciences, 21, 3271–3288, https://doi.org/10.5194/bg-21-3271-2024, https://doi.org/10.5194/bg-21-3271-2024, 2024
Short summary
Short summary
We report the first benthic foraminifera with a composite test (i.e. shell) made of opal, which coats the inner part of the calcitic layer. Using comprehensive techniques, we describe the morphology and the composition of this novel opal layer and provide evidence that the opal is precipitated by the foraminifera itself. We explore the potential precipitation process and function(s) of this composite test and further discuss the possible implications for palaeoceanographic reconstructions.
Said Mohamed Hashim, Beth Wangui Waweru, and Agnes Muthumbi
Biogeosciences, 21, 2995–3006, https://doi.org/10.5194/bg-21-2995-2024, https://doi.org/10.5194/bg-21-2995-2024, 2024
Short summary
Short summary
The study investigates the impact of decreasing oxygen in the ocean on macrofaunal communities using the BUS as an example. It identifies distinct shifts in community composition and feeding guilds across oxygen zones, with nematodes dominating dysoxic areas. These findings underscore the complex responses of benthic organisms to oxygen gradients, crucial for understanding ecosystem dynamics in hypoxic environments and their implications for marine biodiversity and sustainability.
Isabell Hochfeld and Jana Hinners
EGUsphere, https://doi.org/10.5194/egusphere-2024-1246, https://doi.org/10.5194/egusphere-2024-1246, 2024
Short summary
Short summary
Ecosystem models disagree on future changes in marine ecosystem functioning. We suspect that the lack of phytoplankton adaptation represents a major uncertainty factor, given the key role that phytoplankton play in marine ecosystems. Using an evolutionary ecosystem model, we found that phytoplankton adaptation can notably change simulated ecosystem dynamics. Future models should include phytoplankton adaptation, otherwise they can systematically overestimate future ecosystem-level changes.
Tanguy Soulié, Francesca Vidussi, Justine Courboulès, Marie Heydon, Sébastien Mas, Florian Voron, Carolina Cantoni, Fabien Joux, and Behzad Mostajir
Biogeosciences, 21, 1887–1902, https://doi.org/10.5194/bg-21-1887-2024, https://doi.org/10.5194/bg-21-1887-2024, 2024
Short summary
Short summary
Due to climate change, it is projected that extreme rainfall events, which bring terrestrial matter into coastal seas, will occur more frequently in the Mediterranean region. To test the effects of runoffs of terrestrial matter on plankton communities from Mediterranean coastal waters, an in situ mesocosm experiment was conducted. The simulated runoff affected key processes mediated by plankton, such as primary production and respiration, suggesting major consequences of such events.
Chueh-Chen Tung, Yu-Shih Lin, Jian-Xiang Liao, Tzu-Hsuan Tu, James T. Liu, Li-Hung Lin, Pei-Ling Wang, and Chih-Lin Wei
Biogeosciences, 21, 1729–1756, https://doi.org/10.5194/bg-21-1729-2024, https://doi.org/10.5194/bg-21-1729-2024, 2024
Short summary
Short summary
This study contrasts seabed food webs between a river-fed, high-energy canyon and the nearby slope. We show higher organic carbon (OC) flows through the canyon than the slope. Bacteria dominated the canyon, while seabed fauna contributed more to the slope food web. Due to frequent perturbation, the canyon had a lower faunal stock and OC recycling. Only 4 % of the seabed OC flux enters the canyon food web, suggesting a significant role of the river-fed canyon in transporting OC to the deep sea.
Joost de Vries, Fanny Monteiro, Gerald Langer, Colin Brownlee, and Glen Wheeler
Biogeosciences, 21, 1707–1727, https://doi.org/10.5194/bg-21-1707-2024, https://doi.org/10.5194/bg-21-1707-2024, 2024
Short summary
Short summary
Calcifying phytoplankton (coccolithophores) utilize a life cycle in which they can grow and divide into two different phases. These two phases (HET and HOL) vary in terms of their physiology and distributions, with many unknowns about what the key differences are. Using a combination of lab experiments and model simulations, we find that nutrient storage is a critical difference between the two phases and that this difference allows them to inhabit different nitrogen input regimes.
Theodor Kindeberg, Karl Michael Attard, Jana Hüller, Julia Müller, Cintia Organo Quintana, and Eduardo Infantes
Biogeosciences, 21, 1685–1705, https://doi.org/10.5194/bg-21-1685-2024, https://doi.org/10.5194/bg-21-1685-2024, 2024
Short summary
Short summary
Seagrass meadows are hotspots for biodiversity and productivity, and planting seagrass is proposed as a tool for mitigating biodiversity loss and climate change. We assessed seagrass planted in different years and found that benthic oxygen and carbon fluxes increased as the seabed developed from bare sediments to a mature seagrass meadow. This increase was partly linked to the diversity of colonizing algae which increased the light-use efficiency of the seagrass meadow community.
Anna-Selma van der Kaaden, Sandra R. Maier, Siluo Chen, Laurence H. De Clippele, Evert de Froe, Theo Gerkema, Johan van de Koppel, Furu Mienis, Christian Mohn, Max Rietkerk, Karline Soetaert, and Dick van Oevelen
Biogeosciences, 21, 973–992, https://doi.org/10.5194/bg-21-973-2024, https://doi.org/10.5194/bg-21-973-2024, 2024
Short summary
Short summary
Combining hydrodynamic simulations and annotated videos, we separated which hydrodynamic variables that determine reef cover are engineered by cold-water corals and which are not. Around coral mounds, hydrodynamic zones seem to create a typical reef zonation, restricting corals from moving deeper (the expected response to climate warming). But non-engineered downward velocities in winter (e.g. deep winter mixing) seem more important for coral reef growth than coral engineering.
Xiaoke Xin, Giulia Faucher, and Ulf Riebesell
Biogeosciences, 21, 761–772, https://doi.org/10.5194/bg-21-761-2024, https://doi.org/10.5194/bg-21-761-2024, 2024
Short summary
Short summary
Ocean alkalinity enhancement (OAE) is a promising approach to remove CO2 by accelerating natural rock weathering. However, some of the alkaline substances contain trace metals which could be toxic to marine life. By exposing three representative phytoplankton species to Ni released from alkaline materials, we observed varying responses of phytoplankton to nickel concentrations, suggesting caution should be taken and toxic thresholds should be avoided in OAE with Ni-rich materials.
Evert de Froe, Igor Yashayaev, Christian Mohn, Johanne Vad, Furu Mienis, Gerard Duineveld, Ellen Kenchington, Erica Head, Steve Ross, Sabena Blackbird, George Wolff, Murray Roberts, Barry MacDonald, Graham Tulloch, and Dick van Oevelen
EGUsphere, https://doi.org/10.31223/X58968, https://doi.org/10.31223/X58968, 2024
Short summary
Short summary
Deep-sea sponge grounds are distributed globally and are considered hotspots of biological diversity and biogeochemical cycling. To date, little is known about the environmental constraints that control where deep-sea sponge grounds occur and what conditions favor high sponge biomass. Here, we characterize oceanographic conditions at two contrasting sponge grounds. Our results imply that sponges and associated fauna benefit from strong tidal currents and favorable regional ocean currents.
Olmo Miguez-Salas, Angelika Brandt, Henry Knauber, and Torben Riehl
Biogeosciences, 21, 641–655, https://doi.org/10.5194/bg-21-641-2024, https://doi.org/10.5194/bg-21-641-2024, 2024
Short summary
Short summary
In the deep sea, the interaction between benthic fauna (tracemakers) and substrate can be preserved as traces (i.e. lebensspuren), which are common features of seafloor landscapes, rendering them promising proxies for inferring biodiversity from marine images. No general correlation was observed between traces and benthic fauna. However, a local correlation was observed between specific stations depending on unknown tracemakers, tracemaker behaviour, and lebensspuren morphotypes.
Cale A. Miller, Pierre Urrutti, Jean-Pierre Gattuso, Steeve Comeau, Anaïs Lebrun, Samir Alliouane, Robert W. Schlegel, and Frédéric Gazeau
Biogeosciences, 21, 315–333, https://doi.org/10.5194/bg-21-315-2024, https://doi.org/10.5194/bg-21-315-2024, 2024
Short summary
Short summary
This work describes an experimental system that can replicate and manipulate environmental conditions in marine or aquatic systems. Here, we show how the temperature and salinity of seawater delivered from a fjord is manipulated to experimental tanks on land. By constantly monitoring temperature and salinity in each tank via a computer program, the system continuously adjusts automated flow valves to ensure the seawater in each tank matches the targeted experimental conditions.
Rachel A. Kruft Welton, George Hoppit, Daniela N. Schmidt, James D. Witts, and Benjamin C. Moon
Biogeosciences, 21, 223–239, https://doi.org/10.5194/bg-21-223-2024, https://doi.org/10.5194/bg-21-223-2024, 2024
Short summary
Short summary
We conducted a meta-analysis of known experimental literature examining how marine bivalve growth rates respond to climate change. Growth is usually negatively impacted by climate change. Bivalve eggs/larva are generally more vulnerable than either juveniles or adults. Available data on the bivalve response to climate stressors are biased towards early growth stages (commercially important in the Global North), and many families have only single experiments examining climate change impacts.
Vincent Mouchi, Christophe Pecheyran, Fanny Claverie, Cécile Cathalot, Marjolaine Matabos, Yoan Germain, Olivier Rouxel, Didier Jollivet, Thomas Broquet, and Thierry Comtet
Biogeosciences, 21, 145–160, https://doi.org/10.5194/bg-21-145-2024, https://doi.org/10.5194/bg-21-145-2024, 2024
Short summary
Short summary
The impact of deep-sea mining will depend critically on the ability of larval dispersal of hydrothermal mollusks to connect and replenish natural populations. However, assessing connectivity is extremely challenging, especially in the deep sea. Here, we investigate the potential of using the chemical composition of larval shells to discriminate larval origins between multiple hydrothermal sites in the southwest Pacific. Our results confirm that this method can be applied with high accuracy.
Hyunjae Chung, Jikang Park, Mijin Park, Yejin Kim, Unyoung Chun, Sukyoung Yun, Won Sang Lee, Seung-Tae Yoon, and Won Young Lee
EGUsphere, https://doi.org/10.5194/egusphere-2023-2757, https://doi.org/10.5194/egusphere-2023-2757, 2024
Short summary
Short summary
Understanding how marine animals adapt to spatial and temporal shifts in oceanographic conditions is of utmost importance. In this paper, we investigated the influence of changes in seawater properties on the seasonal behavior of Weddell seals in the Ross Sea, Antarctica. Our findings could serve as a baseline and establish a foundational understanding for future research, particularly concerning the impact of marine environmental changes on the ecosystem of the Ross Sea Marine Protected Area.
Anna-Marie Winter, Nadezda Vasilyeva, and Artem Vladimirov
Biogeosciences, 20, 3683–3716, https://doi.org/10.5194/bg-20-3683-2023, https://doi.org/10.5194/bg-20-3683-2023, 2023
Short summary
Short summary
There is an increasing number of fish in poor state, and many do not recover, even when fishing pressure is ceased. An Allee effect can hinder population recovery because it suppresses the fish's productivity at low abundance. With a model fitted to 17 Atlantic cod stocks, we find that ocean warming and fishing can cause an Allee effect. If present, the Allee effect hinders fish recovery. This shows that Allee effects are dynamic, not uncommon, and calls for precautionary management measures.
Afrah Alothman, Daffne López-Sandoval, Carlos M. Duarte, and Susana Agustí
Biogeosciences, 20, 3613–3624, https://doi.org/10.5194/bg-20-3613-2023, https://doi.org/10.5194/bg-20-3613-2023, 2023
Short summary
Short summary
This study investigates bacterial dissolved inorganic carbon (DIC) fixation in the Red Sea, an oligotrophic ecosystem, using stable-isotope labeling and spectroscopy. The research reveals that bacterial DIC fixation significantly contributes to total DIC fixation, in the surface and deep water. The study demonstrates that as primary production decreases, the role of bacterial DIC fixation increases, emphasizing its importance with photosynthesis in estimating oceanic carbon dioxide production.
Arianna Zampollo, Thomas Cornulier, Rory O'Hara Murray, Jacqueline Fiona Tweddle, James Dunning, and Beth E. Scott
Biogeosciences, 20, 3593–3611, https://doi.org/10.5194/bg-20-3593-2023, https://doi.org/10.5194/bg-20-3593-2023, 2023
Short summary
Short summary
This paper highlights the use of the bottom mixed layer depth (BMLD: depth between the end of the pycnocline and the mixed layer below) to investigate subsurface Chlorophyll a (a proxy of primary production) in temperate stratified shelf waters. The strict correlation between subsurface Chl a and BMLD becomes relevant in shelf-productive waters where multiple stressors (e.g. offshore infrastructure) will change the stratification--mixing balance and related carbon fluxes.
Marco Fusi, Sylvain Rigaud, Giovanna Guadagnin, Alberto Barausse, Ramona Marasco, Daniele Daffonchio, Julie Régis, Louison Huchet, Capucine Camin, Laura Pettit, Cristina Vina-Herbon, and Folco Giomi
Biogeosciences, 20, 3509–3521, https://doi.org/10.5194/bg-20-3509-2023, https://doi.org/10.5194/bg-20-3509-2023, 2023
Short summary
Short summary
Oxygen availability in marine water and freshwater is very variable at daily and seasonal scales. The dynamic nature of oxygen fluctuations has important consequences for animal and microbe physiology and ecology, yet it is not fully understood. In this paper, we showed the heterogeneous nature of the aquatic oxygen landscape, which we defined here as the
oxyscape, and we addressed the importance of considering the oxyscape in the modelling and managing of aquatic ecosystems.
Anne L. Morée, Tayler M. Clarke, William W. L. Cheung, and Thomas L. Frölicher
Biogeosciences, 20, 2425–2454, https://doi.org/10.5194/bg-20-2425-2023, https://doi.org/10.5194/bg-20-2425-2023, 2023
Short summary
Short summary
Ocean temperature and oxygen shape marine habitats together with species’ characteristics. We calculated the impacts of projected 21st-century warming and oxygen loss on the contemporary habitat volume of 47 marine species and described the drivers of these impacts. Most species lose less than 5 % of their habitat at 2 °C of global warming, but some species incur losses 2–3 times greater than that. We also calculate which species may be most vulnerable to climate change and why this is the case.
Markus A. Min, David M. Needham, Sebastian Sudek, Nathan Kobun Truelove, Kathleen J. Pitz, Gabriela M. Chavez, Camille Poirier, Bente Gardeler, Elisabeth von der Esch, Andrea Ludwig, Ulf Riebesell, Alexandra Z. Worden, and Francisco P. Chavez
Biogeosciences, 20, 1277–1298, https://doi.org/10.5194/bg-20-1277-2023, https://doi.org/10.5194/bg-20-1277-2023, 2023
Short summary
Short summary
Emerging molecular methods provide new ways of understanding how marine communities respond to changes in ocean conditions. Here, environmental DNA was used to track the temporal evolution of biological communities in the Peruvian coastal upwelling system and in an adjacent enclosure where upwelling was simulated. We found that the two communities quickly diverged, with the open ocean being one found during upwelling and the enclosure evolving to one found under stratified conditions.
Wojciech Majewski, Witold Szczuciński, and Andrew J. Gooday
Biogeosciences, 20, 523–544, https://doi.org/10.5194/bg-20-523-2023, https://doi.org/10.5194/bg-20-523-2023, 2023
Short summary
Short summary
We studied foraminifera living in the fjords of South Georgia, a sub-Antarctic island sensitive to climate change. As conditions in water and on the seafloor vary, different associations of these microorganisms dominate far inside, in the middle, and near fjord openings. Assemblages in inner and middle parts of fjords are specific to South Georgia, but they may become widespread with anticipated warming. These results are important for interpretating fossil records and monitoring future change.
Allanah Joy Paul, Lennart Thomas Bach, Javier Arístegui, Elisabeth von der Esch, Nauzet Hernández-Hernández, Jonna Piiparinen, Laura Ramajo, Kristian Spilling, and Ulf Riebesell
Biogeosciences, 19, 5911–5926, https://doi.org/10.5194/bg-19-5911-2022, https://doi.org/10.5194/bg-19-5911-2022, 2022
Short summary
Short summary
We investigated how different deep water chemistry and biology modulate the response of surface phytoplankton communities to upwelling in the Peruvian coastal zone. Our results show that the most influential drivers were the ratio of inorganic nutrients (N : P) and the microbial community present in upwelling source water. These led to unexpected and variable development in the phytoplankton assemblage that could not be predicted by the amount of inorganic nutrients alone.
Hanna M. Kauko, Philipp Assmy, Ilka Peeken, Magdalena Różańska-Pluta, Józef M. Wiktor, Gunnar Bratbak, Asmita Singh, Thomas J. Ryan-Keogh, and Sebastien Moreau
Biogeosciences, 19, 5449–5482, https://doi.org/10.5194/bg-19-5449-2022, https://doi.org/10.5194/bg-19-5449-2022, 2022
Short summary
Short summary
This article studies phytoplankton (microscopic
plantsin the ocean capable of photosynthesis) in Kong Håkon VII Hav in the Southern Ocean. Different species play different roles in the ecosystem, and it is therefore important to assess the species composition. We observed that phytoplankton blooms in this area are formed by large diatoms with strong silica armors, which can lead to high silica (and sometimes carbon) export to depth and be important prey for krill.
Chloe Carbonne, Steeve Comeau, Phoebe T. W. Chan, Keyla Plichon, Jean-Pierre Gattuso, and Núria Teixidó
Biogeosciences, 19, 4767–4777, https://doi.org/10.5194/bg-19-4767-2022, https://doi.org/10.5194/bg-19-4767-2022, 2022
Short summary
Short summary
For the first time, our study highlights the synergistic effects of a 9-month warming and acidification combined stress on the early life stages of a Mediterranean azooxanthellate coral, Astroides calycularis. Our results predict a decrease in dispersion, settlement, post-settlement linear extention, budding and survival under future global change and that larvae and recruits of A. calycularis are stages of interest for this Mediterranean coral resistance, resilience and conservation.
Iris E. Hendriks, Anna Escolano-Moltó, Susana Flecha, Raquel Vaquer-Sunyer, Marlene Wesselmann, and Núria Marbà
Biogeosciences, 19, 4619–4637, https://doi.org/10.5194/bg-19-4619-2022, https://doi.org/10.5194/bg-19-4619-2022, 2022
Short summary
Short summary
Seagrasses are marine plants with the capacity to act as carbon sinks due to their high primary productivity, using carbon for growth. This capacity can play a key role in climate change mitigation. We compiled and published data showing that two Mediterranean seagrass species have different metabolic rates, while the study method influences the rates of the measurements. Most communities act as carbon sinks, while the western basin might be more productive than the eastern Mediterranean.
Raúl Tapia, Sze Ling Ho, Hui-Yu Wang, Jeroen Groeneveld, and Mahyar Mohtadi
Biogeosciences, 19, 3185–3208, https://doi.org/10.5194/bg-19-3185-2022, https://doi.org/10.5194/bg-19-3185-2022, 2022
Short summary
Short summary
We report census counts of planktic foraminifera in depth-stratified plankton net samples off Indonesia. Our results show that the vertical distribution of foraminifera species routinely used in paleoceanographic reconstructions varies in hydrographically distinct regions, likely in response to food availability. Consequently, the thermal gradient based on mixed layer and thermocline dwellers also differs for these regions, suggesting potential implications for paleoceanographic reconstructions.
Ricardo González-Gil, Neil S. Banas, Eileen Bresnan, and Michael R. Heath
Biogeosciences, 19, 2417–2426, https://doi.org/10.5194/bg-19-2417-2022, https://doi.org/10.5194/bg-19-2417-2022, 2022
Short summary
Short summary
In oceanic waters, the accumulation of phytoplankton biomass in winter, when light still limits growth, is attributed to a decrease in grazing as the mixed layer deepens. However, in coastal areas, it is not clear whether winter biomass can accumulate without this deepening. Using 21 years of weekly data, we found that in the Scottish coastal North Sea, the seasonal increase in light availability triggers the accumulation of phytoplankton biomass in winter, when light limitation is strongest.
Birgit Koehler, Mårten Erlandsson, Martin Karlsson, and Lena Bergström
Biogeosciences, 19, 2295–2312, https://doi.org/10.5194/bg-19-2295-2022, https://doi.org/10.5194/bg-19-2295-2022, 2022
Short summary
Short summary
Understanding species richness patterns remains a challenge for biodiversity management. We estimated fish species richness over a coastal salinity gradient (3–32) with a method that allowed comparing data from various sources. Species richness was 3-fold higher at high vs. low salinity, and salinity influenced species’ habitat preference, mobility and feeding type. If climate change causes upper-layer freshening of the Baltic Sea, further shifts along the identified patterns may be expected.
Uri Obolski, Thomas Wichard, Alvaro Israel, Alexander Golberg, and Alexander Liberzon
Biogeosciences, 19, 2263–2271, https://doi.org/10.5194/bg-19-2263-2022, https://doi.org/10.5194/bg-19-2263-2022, 2022
Short summary
Short summary
The algal genus Ulva plays a major role in coastal ecosystems worldwide and is a promising prospect as an seagriculture crop. A substantial hindrance to cultivating Ulva arises from sudden sporulation, leading to biomass loss. This process is not yet well understood. Here, we characterize the dynamics of Ulva growth, considering the potential impact of sporulation inhibitors, using a mathematical model. Our findings are an essential step towards understanding the dynamics of Ulva growth.
Emanuela Fanelli, Samuele Menicucci, Sara Malavolti, Andrea De Felice, and Iole Leonori
Biogeosciences, 19, 1833–1851, https://doi.org/10.5194/bg-19-1833-2022, https://doi.org/10.5194/bg-19-1833-2022, 2022
Short summary
Short summary
Zooplankton play a key role in marine ecosystems, forming the base of the marine food web and a link between primary producers and higher-order consumers, such as fish. This aspect is crucial in the Adriatic basin, one of the most productive and overexploited areas of the Mediterranean Sea. A better understanding of community and food web structure and their response to water mass changes is essential under a global warming scenario, as zooplankton are sensitive to climate change.
Masaya Yoshikai, Takashi Nakamura, Rempei Suwa, Sahadev Sharma, Rene Rollon, Jun Yasuoka, Ryohei Egawa, and Kazuo Nadaoka
Biogeosciences, 19, 1813–1832, https://doi.org/10.5194/bg-19-1813-2022, https://doi.org/10.5194/bg-19-1813-2022, 2022
Short summary
Short summary
This study presents a new individual-based vegetation model to investigate salinity control on mangrove productivity. The model incorporates plant hydraulics and tree competition and predicts unique and complex patterns of mangrove forest structures that vary across soil salinity gradients. The presented model does not hold an empirical expression of salinity influence on productivity and thus may provide a better understanding of mangrove forest dynamics in future climate change.
Coulson A. Lantz, William Leggat, Jessica L. Bergman, Alexander Fordyce, Charlotte Page, Thomas Mesaglio, and Tracy D. Ainsworth
Biogeosciences, 19, 891–906, https://doi.org/10.5194/bg-19-891-2022, https://doi.org/10.5194/bg-19-891-2022, 2022
Short summary
Short summary
Coral bleaching events continue to drive the degradation of coral reefs worldwide. In this study we measured rates of daytime coral reef community calcification and photosynthesis during a reef-wide bleaching event. Despite a measured decline in coral health across several taxa, there was no change in overall daytime community calcification and photosynthesis. These findings highlight potential limitations of these community-level metrics to reflect actual changes in coral health.
Hyewon Heather Kim, Jeff S. Bowman, Ya-Wei Luo, Hugh W. Ducklow, Oscar M. Schofield, Deborah K. Steinberg, and Scott C. Doney
Biogeosciences, 19, 117–136, https://doi.org/10.5194/bg-19-117-2022, https://doi.org/10.5194/bg-19-117-2022, 2022
Short summary
Short summary
Heterotrophic marine bacteria are tiny organisms responsible for taking up organic matter in the ocean. Using a modeling approach, this study shows that characteristics (taxonomy and physiology) of bacteria are associated with a subset of ecological processes in the coastal West Antarctic Peninsula region, a system susceptible to global climate change. This study also suggests that bacteria will become more active, in particular large-sized cells, in response to changing climates in the region.
Alice E. Webb, Didier M. de Bakker, Karline Soetaert, Tamara da Costa, Steven M. A. C. van Heuven, Fleur C. van Duyl, Gert-Jan Reichart, and Lennart J. de Nooijer
Biogeosciences, 18, 6501–6516, https://doi.org/10.5194/bg-18-6501-2021, https://doi.org/10.5194/bg-18-6501-2021, 2021
Short summary
Short summary
The biogeochemical behaviour of shallow reef communities is quantified to better understand the impact of habitat degradation and species composition shifts on reef functioning. The reef communities investigated barely support reef functions that are usually ascribed to conventional coral reefs, and the overall biogeochemical behaviour is found to be similar regardless of substrate type. This suggests a decrease in functional diversity which may therefore limit services provided by this reef.
Emmanuel Devred, Andrea Hilborn, and Cornelia Elizabeth den Heyer
Biogeosciences, 18, 6115–6132, https://doi.org/10.5194/bg-18-6115-2021, https://doi.org/10.5194/bg-18-6115-2021, 2021
Short summary
Short summary
A theoretical model of grey seal seasonal abundance on Sable Island (SI) coupled with chlorophyll-a concentration [chl-a] measured by satellite revealed the impact of seal nitrogen fertilization on the surrounding waters of SI, Canada. The increase in seals from about 100 000 in 2003 to about 360 000 in 2018 during the breeding season is consistent with an increase in [chl-a] leeward of SI. The increase in seal abundance explains 8 % of the [chl-a] increase.
Julie Meilland, Michael Siccha, Maike Kaffenberger, Jelle Bijma, and Michal Kucera
Biogeosciences, 18, 5789–5809, https://doi.org/10.5194/bg-18-5789-2021, https://doi.org/10.5194/bg-18-5789-2021, 2021
Short summary
Short summary
Planktonic foraminifera population dynamics has long been assumed to be controlled by synchronous reproduction and ontogenetic vertical migration (OVM). Due to contradictory observations, this concept became controversial. We here test it in the Atlantic ocean for four species of foraminifera representing the main clades. Our observations support the existence of synchronised reproduction and OVM but show that more than half of the population does not follow the canonical trajectory.
Federica Maggioni, Mireille Pujo-Pay, Jérome Aucan, Carlo Cerrano, Barbara Calcinai, Claude Payri, Francesca Benzoni, Yves Letourneur, and Riccardo Rodolfo-Metalpa
Biogeosciences, 18, 5117–5140, https://doi.org/10.5194/bg-18-5117-2021, https://doi.org/10.5194/bg-18-5117-2021, 2021
Short summary
Short summary
Based on current experimental evidence, climate change will affect up to 90 % of coral reefs worldwide. The originality of this study arises from our recent discovery of an exceptional study site where environmental conditions (temperature, pH, and oxygen) are even worse than those forecasted for the future.
While these conditions are generally recognized as unfavorable for marine life, we found a rich and abundant coral reef thriving under such extreme environmental conditions.
Nisan Sariaslan and Martin R. Langer
Biogeosciences, 18, 4073–4090, https://doi.org/10.5194/bg-18-4073-2021, https://doi.org/10.5194/bg-18-4073-2021, 2021
Short summary
Short summary
Analyses of foraminiferal assemblages from the Mamanguape mangrove estuary (northern Brazil) revealed highly diverse, species-rich, and structurally complex biotas. The atypical fauna resembles shallow-water offshore assemblages and are interpreted to be the result of highly saline ocean waters penetrating deep into the estuary. The findings contrast with previous studies, have implications for the fossil record, and provide novel perspectives for reconstructing mangrove environments.
Jutta E. Wollenburg, Jelle Bijma, Charlotte Cremer, Ulf Bickmeyer, and Zora Mila Colomba Zittier
Biogeosciences, 18, 3903–3915, https://doi.org/10.5194/bg-18-3903-2021, https://doi.org/10.5194/bg-18-3903-2021, 2021
Short summary
Short summary
Cultured at in situ high-pressure conditions Cibicides and Cibicidoides taxa develop lasting ectoplasmic structures that cannot be retracted or resorbed. An ectoplasmic envelope surrounds their test and may protect the shell, e.g. versus carbonate aggressive bottom water conditions. Ectoplasmic roots likely anchor the specimens in areas of strong bottom water currents, trees enable them to elevate themselves above ground, and twigs stabilize and guide the retractable pseudopodial network.
Kumar Nimit
Biogeosciences, 18, 3631–3635, https://doi.org/10.5194/bg-18-3631-2021, https://doi.org/10.5194/bg-18-3631-2021, 2021
Short summary
Short summary
The Indian Ocean Rim hosts many of the underdeveloped and emerging economies that depend on ocean resources for the livelihood of millions. Operational ocean information services cater to the requirements of resource managers and end-users to efficiently harness resources, mitigate threats and ensure safety. This paper outlines existing tools and explores the ongoing research that has the potential to convert the findings into operational services in the near- to midterm.
Finn Mielck, Rune Michaelis, H. Christian Hass, Sarah Hertel, Caroline Ganal, and Werner Armonies
Biogeosciences, 18, 3565–3577, https://doi.org/10.5194/bg-18-3565-2021, https://doi.org/10.5194/bg-18-3565-2021, 2021
Short summary
Short summary
Marine sand mining is becoming more and more important to nourish fragile coastlines that face global change. We investigated the largest sand extraction site in the German Bight. The study reveals that after more than 35 years of mining, the excavation pits are still detectable on the seafloor while the sediment composition has largely changed. The organic communities living in and on the seafloor were strongly decimated, and no recovery is observable towards previous conditions.
France Van Wambeke, Elvira Pulido, Philippe Catala, Julie Dinasquet, Kahina Djaoudi, Anja Engel, Marc Garel, Sophie Guasco, Barbara Marie, Sandra Nunige, Vincent Taillandier, Birthe Zäncker, and Christian Tamburini
Biogeosciences, 18, 2301–2323, https://doi.org/10.5194/bg-18-2301-2021, https://doi.org/10.5194/bg-18-2301-2021, 2021
Short summary
Short summary
Michaelis–Menten kinetics were determined for alkaline phosphatase, aminopeptidase and β-glucosidase in the Mediterranean Sea. Although the ectoenzymatic-hydrolysis contribution to heterotrophic prokaryotic needs was high in terms of N, it was low in terms of C. This study points out the biases in interpretation of the relative differences in activities among the three tested enzymes in regard to the choice of added concentrations of fluorogenic substrates.
Oscar E. Romero, Simon Ramondenc, and Gerhard Fischer
Biogeosciences, 18, 1873–1891, https://doi.org/10.5194/bg-18-1873-2021, https://doi.org/10.5194/bg-18-1873-2021, 2021
Short summary
Short summary
Upwelling intensity along NW Africa varies on the interannual to decadal timescale. Understanding its changes is key for the prediction of future changes of CO2 sequestration in the northeastern Atlantic. Based on a multiyear (1988–2009) sediment trap experiment at the site CBmeso, fluxes and the species composition of the diatom assemblage are presented. Our data help in establishing the scientific basis for forecasting and modeling future states of this ecosystem and its decadal changes.
Katharine T. Bigham, Ashley A. Rowden, Daniel Leduc, and David A. Bowden
Biogeosciences, 18, 1893–1908, https://doi.org/10.5194/bg-18-1893-2021, https://doi.org/10.5194/bg-18-1893-2021, 2021
Short summary
Short summary
Turbidity flows – underwater avalanches – are large-scale physical disturbances believed to have profound impacts on productivity and diversity of benthic communities in the deep sea. We reviewed published studies and found that current evidence for changes in productivity is ambiguous at best, but the influence on regional and local diversity is clearer. We suggest study design criteria that may lead to a better understanding of large-scale disturbance effects on deep-sea benthos.
Phillip Williamson, Hans-Otto Pörtner, Steve Widdicombe, and Jean-Pierre Gattuso
Biogeosciences, 18, 1787–1792, https://doi.org/10.5194/bg-18-1787-2021, https://doi.org/10.5194/bg-18-1787-2021, 2021
Short summary
Short summary
The reliability of ocean acidification research was challenged in early 2020 when a high-profile paper failed to corroborate previously observed impacts of high CO2 on the behaviour of coral reef fish. We now know the reason why: the
replicatedstudies differed in many ways. Open-minded and collaborative assessment of all research results, both negative and positive, remains the best way to develop process-based understanding of the impacts of ocean acidification on marine organisms.
Cited articles
Arellano, S. M. and Young, C. M.: Spawning, development, and the duration of larval life in a deep-sea cold-seep mussel, Biol. Bull., 216, 149–162, 2009.
Arellano, S. M. and Young, C. M.: Temperature and salinity tolerances of embryos and larvae of the deep-sea mytilid mussel "Bathymodiolus" childressi, Mar. Biol., 158, 2481–2493, 2011.
Audzijonyte, A., Krylova, E. M., Sahling, H., and Vrijenhoek, R. C.: Molecular taxonomy reveals broad trans-oceanic distributions and high species diversity of deep-sea clam (Bivalvia: Vesicomyidae: Pliocardiinae) in chemosynthetic environmanets, Syst. Biodiv., 10, 403–415, 2012.
Baco, A. R., Smith, C. R., Peek, A. S., Roderick, G. K., and Vrijenhoek, R. C.: The phylogenetic relationships of whale-fall vesicomyid clams based on mitochondrial COI DNA sequences, Mar. Ecol.-Prog. Ser., 182, 137–147, 1999.
Bayon, G., Loncke, L., Dupré, S., Caprais, J. C., Ducassou, E., Duperron, S., Etoubleau, J., Foucher, J. P., Fouquet, Y., Gontharet, S., Henderson, G. M., Huguen, C., Klaucke, I., Mascle, J., Migeon, S., Olu, K., Ondréas, H., Pierre, C., Sibuet, M., Stadnitskaia, A., and Woodside, J.: Multi-disciplinary investigation of fluid seepage on an unstable margin: The case of the Central Nile deep sea fan, Mar. Geol., 261, 92–104, 2009.
Beninger, P. G. and Le Pennec, M.: Reproductive characteristics of a primitive bivalve from a deep-sea reducing environment: giant gametes and their significance in Acharax alinae (Cryptodonta: Solemyidae), Mar. Ecol.-Prog. Ser., 157, 195–206, https://doi.org/10.3354/meps157195, 1997.
Blacknell, W. M.: Aspects of the biology of Thyasira gouldi (Philippi) and its copepod parasite Axinophilus thyasirae (Bresciani & Ockelmann), Ph.D. thesis, University of Sterling, 1973.
Blacknell, W. M. and Ansell, A. D.: The direct development of the bivalve Thyasira gouldi, Thalassia Jugoslavia, 10, 23–43, 1974.
Boss, K. J.: Fimbria and its lucinoid affinities (Mollusca; Bivalvia), Breviora, 350, 1–16, 1970.
Brissac, T., Gros, O., and Merçot, H.: Lack of endosymbiont release by two Lucinidae (Bivalvia) of the genus Codakia: consequences for symbiotic relationships, FEMS Microbiol. Ecol., 67, 261–267, 2009.
Brissac, T., Rodrigues, C. F., Gros, O., and Duperron, S.: Characterization of bacterial symbioses in Myrtea sp. (Bivalvia: Lucinidae) and Thyasira sp. (Bivalvia: Thyasiridae) from a cold seep in the eastern Mediterranean, Mar. Ecol., 32, 198–210, 2011.
Brooks, J. M., Kennicutt, M. C., Fisher, C. R., Macko, S. A., Cole, K., Childress, J. J., Bidigare, R. R., and Vetter, R. D.: Deep sea hydrocarbon seep communities: evidence for energy and nutritional carbon sources, Science, 238, 1138–1142, 1987.
Carney, S. L., Formica, M. I., Divatia, H., Nelson, K., Fisher, C. R., and Schaeffer, S. W.: Population structure of the mussel "Bathymodiolus" childressi from gulf of Mexico hydrocarbon seeps, Deep-Sea Res. I, 53, 1061–1072, 2006.
Caro, A., Gros, O., Got, P., De Wit, R., and Trousselier, M.: Characterization of the population of the sulfur-oxidizing symbiont of Codakia orbicularis (Bivalvia, Lucinidae) by single-cell analyses, Appl. Env. Microbiol., 73, 2102–2109, 2007.
Cary, S. C.: Vertical transmission of a chemoautotrophic symbiont in the protobranch bivalve, Solemya reidi, Mol. Mar. Biol. Biotechn., 3, 121–130, 1994.
Cary, S. C., Fisher, C. R., and Felbeck, H.: Mussel growth supported by methane as sole carbon and energy source, Science, 240, 78–80, 1988.
Cavanaugh, C. M.: Symbiotic chemoautotrophic bacteria in marine invertebrates from sulphide-rich habitats, Nature, 302, 58–61, 1983.
Cavanaugh, C. M., Levering, P. R., Maki, J. S., Mitchell, R., and Lidstrom, M. E.: Symbiosis of methylotrophic bacteria and deep-sea mussels, Nature, 325, 346–347, 1987.
Cavanaugh, C. M., Abbott, M. S., and Veenhuis, M.: Immunochemical localization of ribulose-1,5-bisphosphate carboxylase in the symbiont-containing gills of Solemya velum (Bivalvia: Mollusca), P. Natl. Acad. Sci. USA, 85, 7786–7789, 1988.
Cavanaugh, C. M., McKiness, Z. P., Newton, I. L. G., and Stewart, F. J.: Marine chemosynthetic symbioses, in: The Prokaryotes: an evolving electronic resource for the microbiological community, edited by: Dworkin, M., Springer-Verlag, New York, 2005.
Childress, J. J. and Mickel, T. L.: Oxygen and sulfide consumtion rates of the vent clam Calyptogena magnifica, Mar. Biol. Lett., 3, 73–79, 1982.
Childress, J. J., Fisher, C. R., Brooks, J. M., Kennicutt II, M. C., Bidigare, R., and Anderson, A. E.: A methanotrophic marine molluscan (Bivalvia, Mytilidae) symbiosis: Mussels fueled by gas, Science, 233, 1306–1308, 1986.
Childress, J. J., Fisher, C. R., Favuzzi, J. A., Arp, A. J., and Oros, D. R.: The role of a zinc-based, serum bomed sulphide-binding component in the uptake and transport of dissolved sulphide by the chemuautotrophic symbiont-containing clam Calyptogena elongata, J. Exp. Biol., 179, 131–158, 1993.
Comtet, T., Jollivet, D., Khripounoff, A., and Segonzac, M.: Molecular and morphological identification of settlement-stage vent mussel larvae, Bathymodiolus azoricus (Bivalvia Mytilidae), preserved in situ at active vent fields on the Mid-Atlantic Ridge, Limnol. Oceanogr., 45, 1655–1661, 2000.
Connelly, D. P., Copley, J. T., Murton, B. J., Stansfield, K., Tyler, P. A., German, C. R., Van Dover, C. L., Amon, D., Furlong, M., Grindlay, N., Hayman, N., Hühnerbach, V., Judge, M., Le Bas, T., McPhail, S., Meier, A., Nakamura, K., Nye, V., Pebody, M., and Pedersen, R. B.: Hydrothermal vent fields and chemosynthetic biota on the world's deepest seafloor spreading centre, Nat. Commun., 3, 620, https://doi.org/10.1038/ncomms1636, 2012.
Conway, N., McDowell Capuzzo, J., and Fry, B.: The role of endosymbiotic bacteria in the nutrition of Solemya velum: evidence for a stable isotope analysis of endosymbionts and host, Limnol. Oceanogr., 34, 249–255, 1989.
Conway, N., Howes, B., Capuzzo, J., Turner, R., and Cavanaugh, C.: Characterization and site description of Solemya borealis (bivalvia, Solemyidae), another bivalve-bacteria symbiosis, Mar. Biol., 112, 601–613, 1992.
Cordes, E. E., Carney, S. L., Hourdez, S., Carney, R., Brooks, J. M., and Fisher, C. R.: Cold seeps of the deep Gulf of Mexico: community structure and biogeographic comparisons to Atlantic equatorial belt seep communities, Deep-Sea Res. I, 54, 637–653, 2007.
Cordes, E. E., Becker, E. L., Hourdez, S., and Fisher, C. R.: Influence of foundation species, depth, and location on diversity and community composition at Gulf of Mexico lower-slope cold seeps, Deep-Sea Res. II, 57, 1870–1881, 2010.
Cosel, R. V.: A new species of bathymodioline mussel (Mollusca, Bivalvia, Mytilidae) from Mauritania (West Africa), with comments on the genus Bathymodiolus Kenk & Wilson, 1985, Zoosystema, 24, 259–271, 2002.
Cosel, R. V. and Olu, K.: Gigantism in Mytilidae. A new Bathymodiolus from cold seep areas on the Barbados accretionary Prism, C. R. Biol., 321, 655–663, 1998.
Cosel, R. V. and Olu, K.: A new genus and new species of Vesicomyidae (Mollusca, Bivalvia) from cold seeps on the Barbados accretionary prism, with comments on other species, Zoosystema, 30, 929–944, 2008.
Cosel, R. V. and Olu, K.: Large Vesicomyidae (Mollusca: Bivalvia) from cold seeps in the Gulf of Guinea off the coasts of Gabon, Congo and northern Angola, Deep-Sea Res. II, 56, 2350–2379, 2009.
Cosel, R. V. and Salas, C.: Vesicomyidae (Mollusca?: Bivalvia) of the genera Vesicomya, Waisiuconcha, Isorropodon and Callogonia in the eastern Atlantic and the Mediterranean, Sarsia, 86, 333–366, 2001.
Cowen, R. K. and Sponaugle, S.: Larval Dispersal and Marine Population Connectivity, Annu. Rev. Mar. Sci., 1, 443–466, 2009.
Craddock, C., Hoeh, W. R., Gustafson, R. G., Lutz, R. A., Hashimoto, J., and Vrijenhoek, R. J.: Evolutionary relationships among deep-sea mytilids (Bivalvia?: Mytilidae) from hydrothermal vents and cold water methane/sulfide seeps, Mar. Biol., 121, 477–485, 1995.
Crépeau, V., Cambon-Bonavita, M. A., Lesongeur, F., Randrianavelo, H., Sarradin, P. M., Sarrazin, J., and Godfroy, A.: Diversity and function in microbial mats from the Lucky Strike hydrothermal vent field, FEMS Microbiol. Ecol., 76, 524–540, 2011.
Cunha, M. R, Patterson, G. L. J., Amaro, T., Blackbird, S., de Stitger, H. C., Ferreira, C., Glover, A., Hilario, A., Kiriakoulakis, K., Neal, L., Ravara, A., Rodrigues, C. F., Tiago, A., and Billett, D. S. M.: Biodiversity of macrofaunal assemblages from three Portuguese submarine canyons (NE Atlantic), Deep-Sea Res. II, 58, 2433–2447, 2011.
Cunha, M. R., Rodrigues, C. F., Génio, L., Hilário, A., Ravara, A., and Pfannkuche, O.: Macrofaunal assemblages from mud volcanoes in the Gulf of Cadiz: abundance, biodiversity and diversity partitioning across spatial scales, Biogeosciences, 10, 2553–2568, https://doi.org/10.5194/bg-10-2553-2013, 2013.
Dando, P. R. and Spiro, B.: Varying nutritional dependence of the thyasirid bivalves Thyasira sarsi and T. equalis on chemoautotrophic symbiotic bacteria, demonstrated by isotope ratios of tissue carbon and shell carbonate, Mar. Ecol.-Prog. Ser., 92, 151–158, 1993.
Dando, P. R., Southward, A. J., Southward, E. C., Terwilliger, N. B., and Terwilliger, R. C.: Sulphur-oxidizing bacteria and haemoglobin in gills of the bivalve mollusc Myrtea spinifera, Mar. Ecol.-Prog. Ser., 23, 85–98, 1985.
Dando, P. R., Southward, A. J., and Southward, E. C.: Chemoautotrophic symbionts in the gills of the bivalve mollusc Lucinoma borealis and the sediments chemistry of its habitat, P. Roy. Soc. Lond. B, 227, 227–247, 1986.
Dando, P. R., Dixon, D. R., Southward, A. J., Southward, E. C., Crawford, A., and Crawford, M.: Shipwrecked tube worms, Nature 356, p. 667, 1992.
Dando, P., Bussmann, I., Niven, S., Ohara, S., Schmaljohann, R., and Taylor, L.: A methane seep area in the Skagerrak, the habitat of the pogonophore Siboglinum poseidoni and the bivalve mollusk Thyasira sarsi, Mar. Ecol.-Prog. Ser., 107, 157–167, 1994.
De Beer, D., Sauter, E., Niemann, H., Kaul, N., Foucher, J. P., Witte, U., Schluter, M., and Boetius, A.: In situ fluxes and zonation of microbial activity in surface sediments of the Hakon Mosby Mud Volcano, Limnol. Oceanogr., 51, 1315–1331, 2006.
DeChaine, E. G., Bates, A. E., Shank, T., and Cavanaugh, C. M.: Off-axis symbiosis found: characterization and biogeography of bacterial symbionts of Bathymodiolus mussels from Lost City hydrothermal fields, Environ. Microbiol., 8, 1902–1912, 2006.
Decker, C. and Olu, K.: Habitat heterogeneity influences cold-seep macrofaunal communities within and among seeps along the Norwegian margin – Part 2: contribution of chemosynthesis and nutritional patterns, Mar. Ecol.-Evol. Persp., 33, 231–245, 2012.
Decker, C., Olu, K., Cunha, R. L., and Arnaud-Haond, S.: Phylogeny and diversification patterns among vesicomyid bivalves, PLoS One, 7, e33359, https://doi.org/10.1371/journal.pone.0033359, 2012.
Decker C, Olu, K., Arnaud-Haond, S., and Duperrons, S.: Physical proximity may promote lateral acquisition bacterial symbionts in vesicomyid clams, PLoS One, in press, 2013.
Desbruyères, D., Almeida, A., Biscoito, M., Comtet, T., Khripounoff, A., Le Bris, N., Sarradin, P. M., and Segonzac, M.: A review of the distribution of hydrothermal vent communities along the northern Mid-Atlantic Ridge: dispersal vs. environmental controls, Hydrobiologia, 440, 201–216, 2000.
Distel, D. L. and Felbeck, H.: Endosymbiosis in the lucinid clams Lucinoma aequizonata, Lucinoma annulata and Lucina floridana – a reexamination of the functional morphology of the gills as bacteria-bearing organs, Mar. Biol., 96, 79–86, 1987.
Distel, D. L. and Wood, A. P.: Characterization of the gill symbiont of Thyasira flexuosa (Thyasiridae: Bivalvia) by use of the polymerase chain reaction and 16S rRNA sequence analysis, J. Bacteriol., 174, 6317–6320, 1992.
Distel, D. L., Lane, D., Olsen, G., Giovannoni, S., Pace, B., Pace, N., Stahl, D., and Felbeck, H.: Sulfur-oxidizing bacterial endosymbionts – Analysis of phylogeny and specificity by 16S ribosomal RNA sequences, J. Bacteriol., 170, 2506–2510, 1988.
Distel, D. L., Felbeck, H., and Cavanaugh, C.: Evidence for phylogenetic congruence among sulfur-oxidizing chemoautotrophic bacterial endosymbionts and their bivalve host, J. Mol. Evol., 38, 533–542, 1994.
Distel, D. L., Lee, H. K. W., and Cavanaugh, C. M.: Intracellular coexistence of methano- and thioautotrophic bacteria in a hydrothermal vent mussel, P. Natl. Acad. Sci. USA, 92, 9598–9602, 1995.
Distel, D. L., Baco, A., Chuang, E., Morrill, W., Cavanaugh, C., and Smith, C.: Do mussels take wooden steps to deep-sea vents?, Nature, 403, 725–726, 2000.
Douglas, A. E.: Symbiotic interactions, Oxford University Press, Oxford, 1994.
Dubilier, N., Windoffer, R., and Giere, O.: Ultrastructure and stable carbon isotope composition of the hydrothermal vent mussel Bathymodiolus brevior and $B.$ sp. affinis brevior from the North Fiji Basin, western Pacific, Mar. Ecol.-Prog. Ser., 165, 187–193, 1998.
Dubilier, N., Bergin, C., and Lott, C.: Symbiotic diversity in marine animals: the art of harnessing chemosynthesis, Nat. Rev. Microbiol., 6, 725–740, 2008.
Dufour, S. C.: Gill anatomy and the evolution of symbiosis in the bivalve family Thyasiridae, Biol. Bull., 208, 200–212, 2005.
Dufour, S. C. and Felbeck, H.: Sulphide mining by the superextensile foot of symbiotic thyasirid bivalves, Nature, 426, 65–67, 2003.
Dufour, S. C. and Felbeck, H.: Symbiont abundance in thyasirids (Bivalvia) is related to particulate food and sulphide availability, Mar. Ecol.-Prog. Ser., 320, 185–194, 2006.
Duggen, S., Hoernle, K., van den Bogaard, P., Rupke, L., and Morgan, J. P.: Deep roots of the Messinian salinity crisis, Nature, 422, 602–606, 2003.
Duperron, S.: The diversity of deep-sea mussels and their bacterial symbioses, in: The Vent and Seep biota, edited by: Kiel, S., 137–167, Springer, 2010.
Duperron, S., Nadalig, T., Caprais, J. C., Sibuet, M., Fiala-Médioni, A., Amann, R., and Dubilier, N.: Dual symbiosis in a Bathymodiolus mussel from a methane seep on the Gabon continental margin (South East Atlantic): 16S rRNA phylogeny and distribution of the symbionts in the gills, Appl. Environ. Microbiol., 71, 1694–1700, 2005.
Duperron, S., Fiala-Médioni, A., Caprais, J. C., Olu, K., and Sibuet, M.: Evidence for chemoautotrophic symbiosis in a Mediterranean cold seep clam (Bivalvia: Lucinidae): comparative sequence analysis of bacterial 16S rRNA, APS reductase and RubisCO genes, FEMS Microbiol. Ecol., 59, 64–70, 2007a.
Duperron, S., Sibuet, M., MacGregor, B. J., Kuypers, M. M., Fisher, C. R., and Dubilier, N.: Diversity, relative abundance, and metabolic potential of bacterial endosymbionts in three Bathymodiolus mussels (Bivalvia: Mytilidae) from cold seeps in the Gulf of Mexico, Environ. Microbiol., 9, 1423–1438, 2007b.
Duperron, S., Halary, S., Lorion, J., Sibuet, M., and Gaill, F.: Unexpected co occurence of 6 bacterial symbionts in the gill of the cold seep mussel Idas sp. (Bivalvia: Mytilidae), Environ. Microbiol., 10, 433–445, 2008a.
Duperron, S., Laurent, M. C. Z., Gaill, F., and Gros, O.: Sulphur-oxidizing extracellular bacteria in the gills of Mytilidae associated with wood falls, FEMS Microbiol. Ecol., 63, 338–349, 2008b.
Duperron, S., Lorion, J., Samadi, S., Gros, O., and Gaill, F.: Symbioses between deep-sea mussels (Mytilidae: Bathymodiolinae) and chemosynthetic bacteria: diversity, function and evolution, C. R. Biol., 332, 298–310, 2009.
Duperron, S., Guezi, H., Gaudron, S. M., Pop Ristova, P., Wenzhöfer, F., and Boetius, A.: Relative abundances of methane- and sulphur-oxidizing symbionts in the gills of a cold seep mussel and link to their potential energy sources, Geobiology, 9, 481–491, 2011.
Duperron, S., Rodrigues, C. F., Léger, N., Szafranski, K. M., Decker, C., Olu, K., and Gaudron, S. M.: Diversity of symbioses between chemosynthetic bacteria and metazoans at the Guiness cold seep site (Gulf of Guinea, West Africa), Microbiol. Open, 1, 467-480, 2012.
Duplessis, M. R., Ziebis, W., Gros, O., Caro, A., Robidart, J., and Felbeck, H.: Respiration strategies utilized by the gill endosymbiont from the host lucinid Codakia orbicularis (Bivalvia: Lucinidae), Appl. Environ. Microbiol., 70, 4144–4150, 2004.
Durand, P. and Gros, O.: Bacterial host specificity of Lucinacea endosymbionts: interspecific variation in 16S rRNA sequences, FEMS Microbiol. Lett., 140, 193–198, 1996.
Durand, P., Gros, O., Frenkiel, L., and Prieur, D.: Phylogenetic characterization of sulfur-oxidizing bacterial endosymbionts in three tropical Lucinidae by 16S rDNA sequence analysis, Mol. Mar. Biol. Biotechnol., 5, 37–42, 1996.
Eisen, J. A., Smith, S. W., and Cavanaugh, C. M.: Phylogenetic relationships of chemoautotrophic bacterial symbionts of Solemya velum Say (Mollusca: Bivalvia) determined by 16S rRNA gene sequence analysis, J. Bacteriol., 174, 3416–3421, 1992.
Elsaied, H. E., Kaneko, R., and Naganuma, T.: Molecular characterization of a deep-sea methanotrophic mussel symbiont that carries a RuBisCO gene, Mar. Biotechnol., 8, 511–520, 2006.
Endow, K. and Ohta, S.: Occurence of bacteria in the primary oocytes of vesicomyid clam Calyptogena soyoae, Mar. Ecol.-Prog. Ser., 64, 309–317, 1990.
Felbeck, H., Childress, J. J., and Somero, G. N.: Calvin-Benson cycle and sulphide oxidation enzymes in animals from suplhide-rich habitats, Nature, 293, 291–293, 1981.
Fiala-Médioni, A. and Le Pennec, M.: Trophic structural adaptations in relation with the bacterial association of Bivalve molluscs from hydrothermal vents and subduction zones, Symbiosis, 4, 63–74, 1987.
Fiala-Médioni, A., McKiness, Z. P., Dando, P., Boulegue, J., Mariotti, A., Alayse-Danet, A. M., Robinson, J. J., and Cavanaugh, C. M.: Ultrastructural, biochemical and immunological characterisation of two populations of he Mytilid mussel Bathymodiolus azoricus from the Mid Atlantic Ridge: evidence for a dual symbiosis, Mar. Biol., 141, 1035–1043, 2002.
Fisher, C. R.: Chemoautotrophic and methanotrophic symbioses in marine invertebrates, Rev. Aquat. Sci., 2, 399–436, 1990.
Fisher, C. R.: Oxidation of methane by deep-sea Mytilids in the Gulf of Mexico, in: Biochemistry of global change: Radiatively active trace gases, edited by: Oremland, R. S., Chapman & Hall, New York, 606–618, 1993.
Fisher, C. R., Childress, J. J., Arp, A. J., Brooks, J. M., Distel, D. L., Favuzzi, J. A., Felbeck, H., Hessler, R., Johnson, K. S., Kennicutt, M. C., Macko, S. A., Newton, A., Powell, M. A., Somero, G. N., and Soto, T.: Microhabitat variation in the hydrothermal vent mussel, Bathymodiolus thermophilus, at the Rose Garden vent on the Galapagos Rift, Deep-Sea Res., 35, 1769–1791, 1988.
Fisher, C. R., Brooks, J. M., Vodenichar, J. S., Zande, J. M., Childress, J. J., and Burke Jr., R. A.: The co-occurence of methanotrophic and chemoautotrophic sulfur oxidizing bacterial symbionts in a deep-sea mussel, Mar. Ecol., 14, 277–289, 1993.
Frenkiel, L. and Moueza, M.: Gill ultrastructure and symbiotic Bacteria in Codakia orbicularis (bivalvia, Lucinidae), Zoomorphology, 115, 51–61, 1995.
Frenkiel, L., Gros, O., and Moueza, M.: Gill structure in Lucina pectinata (Bivalvia: Lucinidae) with reference to hemoglobin in bivalves with symbiotic sulphur-oxidizing bacteria, Mar. Biol., 125, 511–524, 1996.
Fujiwara, Y., Kato, C., Masui, N., Fujikura, K., and Kojima, S.: Dual symbiosis in the cold-seep thyasirid clam Maorithyas hadalis from the hadal zone in the Japan Trench, western Pacific, Mar. Ecol.-Prog. Ser., 214, 151–159, 2001.
Gaudron, S. M., Pradillon, F., Pailleret, M., Duperron, S., Le Bris, N., and Gaill, F.: Colonization of organic substrates deployed in deep-sea reducing habitats by symbiotic species and associated fauna, Mar. Environ. Res., 70, 1–12, 2010.
Gaudron, S. M., Demoyencourt, E., and Duperron, S.: Reproductive traits of the cold seep mussel Idas modiolaeformis: from gametogenesis to larval dispersal, Biol. Bull., 222, 6–16, 2012.
Gebruk, A. V., Krylova, E. M., Lein, A. Y., Vinogradov, G. M., Anderson, E., Pimenov, N. V., Cherkashev, G. A., and Crane, K.: Methane seep community of the Hakon Mosby mud volcano (the Norwegian Sea): composition and trophic aspects, Sarsia, 88, 394–403, 2003.
Gebruk, A. V., Fabri, M. C., Briand, P., and Desbruyères, D.: Community dynamics over a decadal scale at Logatchev, 14°45´ N, Mid-Atlantic Ridge, Cah. Biol. Mar., 51, 383–388, 2010.
Génio, L., Johnson, S. B., Vrijenhoek, R. C., Cunha, M. R., Tyler, P. A., Kiel, S., and Little, C. T. S.: New record of "Bathymodiolus" mauritanicus Cosel 2002 from the Gulf of Cadiz (NE Atlantic) mud volcanoes, J. Shellfish Res., 27, 53–61, 2008.
German, C. R., Ramirez-Llodra, E., Baker, M. C., Tyler, P. A., and the Chess Scientific Steering Committee: deep-water chemosynthetic ecosystem research during the Census of Marine Life decade and beyond: a proposed deep-ocean road map, PLoS ONE, 6, e23259, https://doi.org/10.1371/journal.pone.0023259, 2011.
Gil, R., Latorre, A., and Moya, A.: Bacterial endosymbionts of insects: insights from comparative genomics, Environ. Microbiol., 6, 1109–1122, 2004.
Goffredi, S. K. and Barry, J. P.: Species-specific variation in sulfide physiology between closely related Vesicomyid clams, Mar. Ecol. Prog. Ser., 225, 227–238, 2002.
Gracia, A., Rangel-Buitrago, N., and Sellanes, J.: Methane seep molluscs from the Sinu-San Jacinto fold belt in the Caribbean Sea of Colombia, J. Mar. Biol. Assoc. UK, 92, 1367–1377, 2012.
Gros, O. and Gaill, F.: Extracellular bacterial association in gills of "wood mussels," Cah. Biol. Mar., 48, 103–109, 2007.
Gros, O., Darrasse, A., Durand, P., Frenkiel, L., and Mouëza, M.: Environmental transmission of a sulfur-oxidizing bacterial gill endosymbiont in the tropical lucinid bivalve Codakia orbicularis, Appl. Environ. Microbiol., 62, 2324–2330, 1996.
Gros, O., Frenkiel, L., and Moueza, M.: Embryonic, larval, and post-larval development in the symbiotic clam Codakia orbicularis (Bivalvia: Lucinidae), Invertebr. Biol., 116, 86–101, 1997.
Gros, O., Duplessis, M. R., and Felbeck, H.: Embryonic development and endosymbiont transmission mode in the symbiotic clam Lucinoma aequizonata (Bivalvia: Lucinidae), Invertebr. Reprod. Dev., 36, 93–103, 1999.
Gros, O., Liberge, M., and Felbeck, H.: Interspecific infection of aposymbiotic juveniles of Codakia orbicularis by various tropical lucinid gill-endosymbionts, Mar. Biol., 142, 57–66, 2003a.
Gros, O., Liberge, M., Heddi, A., Kherchadourian, C., and Felbeck, H.: Detection of the free-living forms of sulfide-oxidizing gill endosymbionts in the lucinid habitat (Thalassia testudinum environment), Appl. Environ. Microbiol., 69, 6254–6257, 2003b.
Gros, O., Elisabeth, N. H., Gustave, S. D. D., Caro, A., and Dubilier, N.: Plasticity of symbiont acquisition throughout the life cycle of the shallow-water tropical lucinid Codakia orbiculata (Mollusca: Bivalvia), Environ. Microbiol., 14, 1584–1595, 2012.
Gustafson, R. and Lutz, R.: Larval and early postlarval development of the protobranch bivalve Solemya velum (mollusca, Bivalvia), J. Mar. Biol. Assoc. UK, 72, 383–402, 1992.
Gustafson, R., Turner, R., Lutz, R., and Vrijenhoek, R.: A new genus and five new species of mussels (Bivavlia, Mytilidae) from deep-sea sulfide/hydrocarbon seeps in the Gulf of Mexico, Malacologia, 40, 63–112, 1998.
Gustafson, R. G. and Reid, R. G. B.: Association of bacteria with larvae of the gutless protobranch bivalve Solemya reidi (Cryptodonta: Solemyidae), Mar. Biol., 97, 389–401, 1988.
Halary, S., Riou, V., Gaill, F., Boudier, T., and Duperron, S.: 3D FISH for the quantification of methane- and sulphur-oxidising endosymbionts in bacteriocytes of the hydrothermal vent mussel Bathymodiolus azoricus, ISME J., 2, 284–292, 2008.
Herry, A., Diouris, M., and Lepennec, M.: Chemoautotrophic symbionts and translocation of fixed carbon from bacteria to host tissues in the littoral bivalve Loripes lucinalis (lucinidae), Mar. Biol., 101, 305–312, 1989.
Imhoff, J. F., Sahling, H., Süling, J., and Kath, T.: 16S rDNA-based phylogeny of sulphur-oxidizing bacterial endosymbionts in marine bivalves from cold-seep habitats, Mar. Ecol.-Prog. Ser., 249, 39–51, 2003.
Ivanov, M., Mazzini, A., Blinova, V., Kozlova, E., Laberg, J.-S., Matveeva, T., Taviani, M., and Kaskov, N.: Seep mounds on the Southern Vøring Plateau (offshore Norway), Mar. Petrol. Geol., 27, 1235–1261, 2010.
Johnson, M. A. and Fernandez, C.: Bacterial symbiosis in Loripes lucinalis (Mollusca: Bivalvia) with comments on reproductive strategy, J. Mar. Biol. Assoc. UK, 81, 251–257, 2001.
Johnson, M. A., Fernandez, C., and Pergent, G.: The ecological importance of an invertebrate chemoautotrophic symbiosis to phanerogam seagrass beds, Bull. Mar. Sci., 71, 1343–1351, 2002.
Jollivet, D., Faugeres, J., Griboulard, R., Desbruyeres, D., and Blanc, G.: Composition and spatial organization of a cold seep community on the South Barbados Accretionary Prism – tectonic, geochemical and sedimentary context, Prog. Oceanogr., 24, 25–45, 1990.
Jones, W. J., Won, Y. J., Maas, P. A. Y., Smith, P. J., Lutz, R. A., and Vrijenhoek, R. C.: Evolution of habitat use by deep-sea mussels, Mar. Biol., 148, 841–851, 2006.
Kadar, E., Bettencourt, R., Costa, V., Serrão Santos, R., Lodo-da-Cunha, A., and Dando, P. R.: Experimentally induced endosymbiont loss and re-acquirement in the hydrothermal vent bivalve Bathymodiolus azoricus, J. Exp. Mar. Biol. Ecol., 318, 99–110, 2005.
Kegwin, L. D.: Pliocene closing of the Isthmus of Panama, based on biostratigraphic evidence from nearby Pacific Ocean and Caribbean Sea cores, Geology, 6, 630–634, 1978.
Kenk, V. C. and Wilson, B. R.: A new mussel (Bivlavia: Mytilidae) from hydrothermal vents in the Galapagos Rift zone, Malacologia, 26, 253–271, 1985.
Kleiner, M., Petersen, J. M., and Dubilier, N.: Convergent and divergent evolution of metabolism in sulfur-oxidizing symbionts and the role of horizontal gene transfer, Curr. Opin. Microbiol., 15, 621–631, 2012.
Krueger, D. M. and Cavanaugh, C. M.: Phylogenetic diversity of bacterial symbionts of Solemya hosts based on comparative sequence analysis of 16S rRNA genes, Appl. Environ. Microbiol., 63, 91–98, 1997.
Krueger, D. M., Gallager, S., and Cavanaugh, C. M.: Suspension feeding on phytoplankton by Solemya velum, a symbiont-containing clam, Mar. Ecol.-Prog. Ser., 86, 145–151, 1992.
Krueger, D. M., Dubilier, N., and Cavanaugh, C. M.: Chemoautotrophic symbiosis in the tropical clam Solemya occidentalis (Bivalvia: Protobranchia): Ultrastructural and phylogenetic analysis, Mar. Biol., 126, 55–64, 1996a.
Krueger, D. M., Gustafson, R. G., and Cavanaugh, C. M.: Vertical transmission of chemoautotrophic symbionts in the bivalve Solemya velum (Bivalvia: Protobranchia), Biol. Bull., 190, 195–202, 1996b.
Krylova, E. and Cosel, R. V.: A new genus of large Vesicomyidae (Mollusca, Bivalvia, Vesicomyidae, Pliocardiinae) from the Congo margin, with the first record of the subfamily Pliocardiinae in the Bay of Biscay (northeastern Atlantic), Zoosystema, 33, 83–99, 2011
Krylova, E. M. and Sahling, H.: Vesicomyidae (Bivalvia): Current taxonomy and distribution, PLoS One, 5, e9957, https://doi.org/10.1371/journal.pone.0009957, 2010.
Krylova, E. M., Sahling, H., and Janssen, R.: Abyssogena: a new genus of the family Vesicomyidae (Bivalvia) from deep-water vents and seeps, J. Molluscan Stud., 76, 107–132, 2010.
Kuwahara, H., Yoshida, T., Takaki, Y., Shimamura, S., Nishi, S., Harada, M., Matsuyama, K., Takishita, K., Kawato, M., Uematsu, K., Fujiwara, Y., Sato, M., Kato, C., Kitagawa, M., Kato, I., and Maruyama, A.: Reduced genome of the thioautotrophic intracellular symbiont in a deep-sea clam, Calyptogena okutanii, Curr. Biol., 17, 881–886, 2007.
Le Bris, N. and Duperron, S.: Chemosynthetic communities and biogeochemical energy pathways along the MAR: the case of Bathymodiolus azoricus, in: Diversity of hydrothermal systems on slow spreading ocean ridges, edited by: Rona, P. A., Devey, C. W., Dyment, J., and Murton, B. J., American Geophysical Union, 409–429, 2010.
Le Goff-Vitry, M. C., Chipman, A. D., and Comtet, T.: In situ hybridization on whole larvae: a novel method for monitoring bivalve larvae, Mar. Ecol.-Prog. Ser., 343, 161–172, 2007.
Le Pennec, M. and Beninger, P. G.: Reproductive characteristics and strategies of reducing-system bivalves, Comp. Bioch. Physiol. A, 126, 1–16, 2000.
Le Pennec, M., Herry, A., Lutz, R. A., and Fiala-Médioni, A.: First ultrastructural observations of the gill of a deep-sea hydrothermal Pectinid Bivalve, C. R. Acad. Sci., 307, 627–633, 1988.
Lee, R. W., Robinson, J. J., and Cavanaugh, C. M.: Pathways of inorganic nitrogen assimilation in chemoautotrophic bacteria-marine invertebrate symbioses: expression of host and symbiont glutamine synthetase, J. Exp. Biol., 202, 289–300, 1999.
Lisin, S. E., Hannan, E. E., Kochevar, R. E., Harrold, C., and Barry, J. P.: Temporal variation in gametogenic cycles of vesicomyid clams, Invertebr. Reprod. Dev., 31, 307–318, 1997.
Little, C. T. S. and Vrijenhoek, R. C.: Are hydrothermal vent animals living fossils?, Trends Ecol. Evol., 18, 582–588, 2003.
Lonsdale, P.: Clustering of suspension-feeding macrobenthos near abyssal hydrothermal vents at oceanic spreading centers, Deep-Sea Res., 24, 857–863, 1977.
Lorion, J. and Samadi, S.: Species richness, sampling bias and phylogenetics in deep-sea mussels, Cah. Biol. Mar., 51, 435–439, 2010.
Lorion, J., Duperron, S., Gros, O., Cruaud, C., Couloux, A., and Samadi, S.: Several deep-sea mussels and their associated symbionts are able to live both on wood and on whale falls, P. Roy. Soc. Lond. B, 276, 177–185, 2009.
Lorion, J., Buge, B., Cruaud, C., and Samadi, S.: New insights into diversity and evolution of deep-sea Mytilidae (Mollusca: Bivalvia), Mol. Phyl. Evol., 57, 71–83, 2010.
Lorion, J., Halary, S., do Nascimento, J., Samadi, S., Couloux, A., and Duperron, S.: Evolutionary history of Idas sp. Med, (Bivalvia: Mytilidae), a cold seep mussel bearing multiple symbionts, Cah. Biol. Mar., 53, 77–87, 2012.
Lutz, R. A., Jablonski, D., Rhoads, D. C., and Turner, R.: Larval dispersal of a deep-sea hydrothermal vent bivalve from the Galapagos rift, Mar. Biol., 57, 127–133, 1980.
Martins, I., Colaço, A., Dando, P. R., Martins, I., Desbruyères, D., Sarradin, P. M., Marques, J. C., and Serrão Santos, R.: Size-dependant variations on the nutritional pathway of Bathymodiolus azoricus demonstrated by a C-flux model, Ecol. Modelling, 217, 59–71, 2008.
Miyazaki, J. I., De Oliveira Martins, L., Fujita, Y., Matsumoto, H., and Fujiwara, Y.: Evolutionary process of deep-sea Bathymodiolus mussels, PLoS one, 5, e10363, https://doi.org/10.1371/journal.pone.0010363, 2010.
Nelson, D. C., Hagen, K. D., and Edwards, D. B.: The gill symbiont of the hydrothermal vent mussel Bathymodiolus thermophilus is a psychrophilic, chemoautotrophic, sulfur bacterium, Mar. Biol., 121, 487–495, 1995.
Newton, I. L. G., Woyke, T., Auchtung, T. A., Dilly, G. F., Dutton, R. J., Fisher, M. C., Fontanez, K. M., Lau, E., Steward, F. J., Richardson, P. M., Barry, K. W., Saunders, E., Detter, J. C., Wu, D., Eisen, J. A., and Cavanaugh, C. M.: The Calyptogena magnifica chemoautotrophic symbiont genome, Science, 315, 998–1000, 2007.
Ockelmann, K.: Developmental types in marine Bivalves and their distribution along the Atlantic coast of Europe, in Proceedings of the first European Malacology Congress 1962, Malacological Society of London, London, 25–35, 1965.
Ockelmann, K. W. and Dinesen, G. E.: Life on wood – the carnivorous deep-sea mussel Idas argenteus (Bathymodiolinae, Mytilidae, Bivalvia), Mar. Biol. Res., 7, 71–84, 2011.
Oliver, P. G. and Holmes, A. M.: New species of Thyasiridae (Bivalvia) from chemosynthetic communities in the Atlantic Ocean, J. Conchol., 39, 175–183, 2006.
Oliver, P. G. and Taylor, J. D.: Bacterial Symbiosis in the Nucinellidae (bivalvia: Solemyida) with Descriptions of Two New Species, J. Molluscan Stud., 78, 81–91, 2012.
Oliver, P. G., Rodrigues, C. F., and Cunha, M. R.: Chemosymbiotic bivalves from the mud volcanoes of the Gulf of Cadiz, NE Atlantic, with descriptions of new species of Solemyidae, Lucinidae and Vesicomyidae, ZooKeys, 113, 1–38, 2011.
Oliver, P. G., Southward, E. C., and Dando, P. R.: Bacterial symbiosis in Syssitomya pourtalesiana Oliver, 2012 (Galeommatoidea: Montacutidae), a bivalve commensal with the deep-sea echinoid Pourtalesia, J. Molluscan Stud., 79, 30–41, 2013.
Olu, K., SIbuet, M., Hermeignies, F., Foucher, J.-P., and Fiala-Médioni, A.: Spatial distribution of diverse cold seep communities living on various diapiric structures of the southern Barbados prism, Prog. Oceanog., 38, 347–376, 1996.
Olu, K., Cordes, E. E., Fisher, C. R., Brooks, J. M., Sibuet, M., and Desbruyères, D.: Biogeography and potential exchanges among the Atlantic Equatorial Belt cold-seep faunas, PLoS one, 5, e11967, https://doi.org/10.1371/journal.pone.0011967, 2010.
Olu-LeRoy, K., Sibuet, M., Fiala-Médioni, A., Gofas, S., Salas, C., Mariotti, A., Foucher, J. P., and Woodside, J.: Cold seep communities in the deep eastern Mediterranean Sea: composition, symbiosis, and spatial distribution on mud volcanoes, Deep-Sea Res. I, 51, 1915–1936, 2004.
Olu-LeRoy, K., Caprais, J. C., Fifis, A., Fabri, M. C., Galéron, J., Budzinski, H., Le Ménach, K., Khripounoff, A., Ondréas, H., and Sibuet, M.: Coll seep assemblages on a giant pockmark off west Africa: spatial patterns and environmental control, Mar. Ecol., 28, 1–16, 2007a.
Olu-LeRoy, K., Cosel, R. V., Hourdez, S., and Jollivet, D.: Amphi-Atlantic cold-seep Bathymodiolus species complexes across the equatorial belt, Deep-Sea Res., 54, 1890–1911, 2007b.
Pailleret, M., Haga, T., Petit, P., Privé-Gill, C., Saedlou, N., Gaill, F., and Zbinden, M.: Sunken woods from the Vanuatu islands: identification of wood substrates and preliminary description of associated fauna, Mar. Ecol., 27, 1–9, 2007.
Parra, M., Sellanes, J., Dupre, E., and Krylova, E.: Reproductive characteristics of Calyptogena gallardoi (Bivalvia: Vesicomyidae) from a methane seep area off Concepcion, Chile, J. Mar. Biol. Assoc. UK, 89, 161–169, 2009.
Pastorelli, A. M., Rositani, L., De Zio, V., and Marano, G.: Rinvenimento di Adula simpsoni (Marshall, 1900) e Xylophaga dorsalis (Turton, 1819) – Mollusca Bivalvia – sul relitto della Kater I Rhades, Biologia Marina Mediterranea, 6, 418–420, 1999.
Paull, C., Hecker, B., Commeau, R., Freemanlynde, R., Neumann, C., Corso, W., Golubic, S., Hook, J., Sikes, E., and Curray, J.: Biological commnities at the Florida escarpment resemble hydrothermal vent taxa, Science, 226, 965–967, 1984.
Peek, A. S., Feldman, R. A., Lutz, R. A., and Vrijenhoek, R. C.: Cospeciation of chemoautotrophic bacteria and deep sea clams, P. Natl. Acad. Sci. USA, 95, 9962–9966, 1998a.
Peek, A. S., Vrijenhoek, R. C., and Gaut, B. S.: Accelerated evolutionary rate in sulfur oxidizing endosymbiotic Bacteria associated with the mode of symbiont transmission, Mol. Biol. Evol., 15, 1514–1523, 1998b.
Pelorce J. and Poutiers J.-M.: Une nouvelle espèce de Bathymodiolinae (Mollusca, Bivalvia, Mytilidae) associée à des os de baleine coulés en Méditerranée, Zoosystema, 31, 975–985, 2009.
Pernthaler, A. and Amann, R.: Simultaneous fluorescence in situ hybridization of mRNA and rRNA in environmental bacteria, Appl. Environ. Microbiol., 70, 5426–5433, 2004.
Petersen, J. M., Zielinski, F. U., Pape, T., Seifert, R., Moraru, C., Amann, R., Hourdez, S., Girguis, P. R., Wankel, S. D., Barbe, V., Pelletier, E., Fink, D., Borowski, C., Bach, W., and Dubilier, N.: Hydrogen is an energy source for hydrothermal vent symbioses, Nature, 476, 176–180, 2011.
Petersen, J. M., Wentrup, C., Verna, C., Knittel, K., and Dubilier, N.: Origins and evolutionary flexibility of chemosynthetic symbionts from deep-sea animals, Biol. Bull., 223, 123–137, 2012.
Pimenov, N. V., Kalyuzhnaya, M. G., Khmelenina, V. N., Mityushina, L. L., and Trotsenko, Y. A.: Utilization of methane and carbon dioxide by symbiotrophic bacteria in gills of Mytilidae (Bathymodiolus) from the Rainbow and Logatchev hydrothermal dields on the Mid-Atlantic Ridge, Microbiology, 71, 587–594, 2002.
Pradillon, F., Schmidt, A., Peplies, J., and Dubilier, N.: Species identification of marine invertebrate early stages by whole-larvae in situ hybridisation of 18S ribosomal RNA, Mar. Ecol.-Prog. Ser., 333, 103–116, 2007.
Raggi, L., Schubotz, F., Hinrichs, K.-U., Dubilier, N., and Petersen J. M.: Bacterial symbionts of Bathymodiolus mussels and Escarpia tubeworms from Chapopote, an asphalt seep in the southern Gulf of Mexico, Environ. Microbiol., https://doi.org/10.1111/1462-2920.12051, 2012.
Rau, G. and Hedges, J.: C-13 depletion in a hydrothermal vent mussel – Suggestion of a chemo-synthetic food source, Science, 203, 648–649, 1979.
Riou, V., Halary, S., Duperron, S., Bouillon, S., Elskens, M., Bettencourt, R., Santos, R. S., Dehairs, F., and Colaço, A.: Influence of CH4 and H2S availability on symbiont distribution, carbon assimilation and transfer in the dual symbiotic vent mussel Bathymodiolus azoricus, Biogeosciences, 5, 1681–1691, https://doi.org/10.5194/bg-5-1681-2008, 2008.
Riou, V., Colaco, A., Bouillon, S., Khripounoff, A., Dando, P., Mangion, P., Chevalier, E., Korntheuer, M., Santos, R. S., and Dehairs, F.: Mixotrophy in the deep sea: a dual endosymbiotic hydrothermal mytilid assimilates dissolved and particulate organic matter, Mar. Ecol.-Prog. Ser., 405, 187–201, 2010.
Ritt, B., Sarrazin, J., Caprais, J.-C., Noël, P., Gauthier, O., Pierre, C., Henry, P., and Desbruyères, D.: First insights into the structure and environmental setting of cold-seep communities in the Marmara Sea, Deep Sea Res. I, 57, 1120–1136, 2010.
Ritt, B., Duperron, S., Lorion, J., Sara Lazar, C., and Sarrazin, J.: Integrative study of a new cold-seep mussel (Mollusca: Bivalvia) associated with chemosynthetic symbionts in the Marmara Sea, Deep Sea Res. I, 67, 121–132, 2012.
Robinson, J. J. and Cavanaugh, C. M.: Expression of form I and form II Rubisco in chemoautotrophic symbioses: Implications for the interpretation of stable carbon isotope values, Limnol. Oceanogr., 40, 1496–1502, 1995.
Rodrigues, C. F. and Duperron, S.: Distinct symbiont lineages in three thyasirid species (Bivalvia: Thyasiridae) form the eastern Atlantic and Mediterranean Sea, Naturwissenschaften, 98, 281–287, 2011.
Rodrigues, C. F., Webster, G., Cunha, M. R., Duperron, S., and Weightman, A. J.: Chemosynthetic bacteria found in bivalve species from mud volcanoes of the Gulf of Cadiz, FEMS Microbiol. Ecol., 73, 486–499, 2010.
Rodrigues, C. F., Duperron, S., and Gaudron, S. M.: First documented record of a living solemyid in a pockmark of the Nile deep-sea fan (eastern Mediterranean Sea), Mar. Biodiv. Rec., 4, e10, https://doi.org/10.1017/S175526721100008X, 2011.
Rodrigues, C., Cunha, M., Olu, K., and Duperron, S.: The smaller vesicomyid bivalves in the genus Isorropodon (Bivalvia, Vesicomyidae, Pliocardiinae) also harbour chemoautotrophic symbionts, Symbiosis, 56, 129–137, 2012.
Rodrigues, C. F., Cunha, M. R., Génio, L., and Duperron, S.: A complex picture of associations between two host mussels and symbiotic bacteria in the Northeast Atlantic, Naturwissenschaften, 100, 12–31, 2013.
Sahling, H., Bohrmann, G., Spiess, V., Bialas, J., Breitzke, M., Ivanov, M. V., Kasten, S., Krastel, S., and Schneider, R.: Pockmarks in the northern Congo fan area, SW Africa: complex seafloor features shaped by fluid flow, Mar. Geol., 249, 206–225, 2008.
Salas, C. and Gofas, S.: Brooding and non-brooding Dacrydium (Bivalvia: Mytilidae): A review of the Atlantic species, J. Molluscan Stud., 63, 261–283, 1997.
Salas, C. and Woodside, J.: Lucinoma kazani n. sp. (Mollusca: Bivalvia): evidence of a living benthic community associated with a cold seep in the Eastern Mediterranean Sea, Deep-Sea Res. I, 49, 991–1005, 2002.
Salerno, J. L., Macko, S. A., Hallam, S. J., Bright, M., Won, Y., McKiness, Z. P., and Van Dover, C. L.: Characterization of symbiont populations in life-history stages of mussels from chemosynthetic environments, Biol. Bull., 208, 145–155, 2005.
Samadi, S., Quéméré, E., Lorion, J., Tillier, A., Cosel, R. V., Lopez, P., Cruaud, C., Couloux, A., and Boisselier-Dubayle, M. C.: Molecular phylogeny in mytilids supports the wooden steps to deep-sea vents hypothesis, C. R. Acad. Sci., 330, 446–456, 2007.
Scheltema, R. S.: Larval dispersal as a means of genetic exchange between geographically separated populations of shallow-water benthic marine gastropods, Biol. Bull., 140, 284–322, 1971.
Schwedock, J., Hermer, T. L., Scott, K. M., Hektor, H. J., Seitz, A. P., Fontana, M. C., Distel, D. L., and Cavanaugh, C. M.: Characterization and expression of genes from the RubisCO gene cluster of the chemoautotrophic symbiont of Solemya velum: cbbLSQO, Arch. Microbiol., 182, 18–29, 2004.
Scott, K. M.: Allometry of gill weights, gill surface areas, and foot biomass d13C values of the chemoautotroph-bivalve symbiosis Solemya velum, Mar. Biol., 147, 935–941, 2005.
Scott, K. M. and Fisher, C. R.: Physiological ecology of sulfide metabolism in hydrothermal vent and coold seep vesicomyid clams and vestimentiferan tubeworms, Amer. Zool., 35, 102–111, 1995.
Smith, C. R. and Baco, A. R.: Ecology of whale falls at the deep-sea floor, Oceanogr. Mar. Biol. Ann. Rev., 41, 311–354, 2003.
Southward, E.: Gill symbionts in Thyasirids and other bivalve mollusks, J. Mar. Biol. Assoc. UK, 66, 889–914, 1986.
Southward, E. C.: The morphology of bacterial symbioses in the gills of mussels of the genera Adipicola and Idas (Bivalvia?: Mytilidae), J. Shellfish Res., 27, 139–146, 2008.
Southward, E. C. and Southward, A. J.: Virus-like particles in bacteria symbiotic in Bivalve gills, J. Mar. Biol. Assoc. UK, 71, 37–45, 1991.
Stewart, F. J. and Cavanaugh, C. M.: Bacterial endosymbioses in Solemya (Mollusca: Bivalvia) – model systems for studies of symbion-host adaptation, A. van Leeuwenhoek, 90, 343–360, 2006.
Stewart, F. J., Young, C. R., and Cavanaugh, C. M.: Lateral symbiont acquisition in a maternally transmitted chemosynthetic clam endosymbiosis, Mol. Biol. Evol., 25, 673–683, 2008.
Stewart, F. J., Baik, A. H. Y., and Cavanaugh, C. M.: Genetic subdivision of chemosynthetic endosymbionts of Solemya velum along the Southern New England Coast, Appl. Environ. Microbiol., 75, 6005–6007, 2009a.
Stewart, F. J., Young, C. R., and Cavanaugh, C. M.: Evidence for homologous recombination in intracellular chemosynthetic clam symbionts, Mol. Biol. Evol., 26, 1391–1404, 2009b.
Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M., and Kumar, S. MEGA5: Molecular Evolutionary Genetics Analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods, Mol. Biol. Evol., 28, 2731–2739, 2011.
Taylor, J. D. and Glover, E.: Functional anatomy, chemosymbiosis and evolution of the Lucinidae, in: The evolutionary biology of the bivalvia, edited by: Harper, E. M., Taylor, J. D., and Crame, J. A., 207–225, Geological Society, London., 2000.
Taylor, J. D. and Glover, E.: Licinidae (Bivalvia) – the most diverse group of chemosymbioic molluscs, Zool. J. Linn. Soc., 148, 421–438, 2006.
Taylor, J. D., Williams, S. T., and Glover, E. A.: Evolutionary relationships of the bivalve family Thyasiridae (Mollusca?: Bivalvia), monophyly and superfamily status, J. Mar. Biol. Assoc. UK, 87, 565–574, 2007.
Taylor, J. D., Glover, E. A., Smith, L., Dyal, P., and Williams, S. T.: Molecular phylogeny and classification of the chemosymbiotic bivalve family Lucinidae (Mollusca: Bivalvia), Zool. J. Linn. Soc., 163, 15–49, 2011.
Terwilliger, R. C., Terwilliger, M. B., and Arp, A.: Thermal vent clam (Calyptogena magnifica) hemoglobin, Science, 219, 981–983, 1983.
Thorson, G.: Reproductive and larval ecology of marine bottom invertebrates, Biol. Rev. Cambridge Philos. Soc., 25, 1–45, 1950.
Tyler, P. A. and Young, C. M.: Reproduction and dispersal at vents and cold seeps, J. Mar. Biol. Assoc. UK, 79, 193–208, 1999.
Tyler, P. A., Young, C. M., Dolan, E., Arellano, S. M., Brooke, S. D., and Baker, M.: Gametogenic periodicity in the chemosynthetic cold-seep mussel "Bathymodiolus" childressi, Mar. Biol., 150, 829–840, 2007.
Van Der Heijden, K., Petersen, J. M., Dubilier, N., and Borowski, C.: Genetic connectivity between North and South Mid-Atlantic Ridge chemosynthetic bivalves and their symbionts, PLoS One, 7, e39994, https://doi.org/10.1371/journal.pone.0039994, 2012.
Van Dover, C. L., Aharon, P., Bernhard, J. M., Caylor, E., Doerris, M., Flickinger, W., Gilhooly, W., Goffredi, S. K., Kniwk, K. E., Macko, S. A., Rapoport, S., Raulfs, E. C., Ruppel, C., Salerno, S. L., Seitz, R. D., Sen Gupta, B. K., Shank, T., Turnipseed, M., and Vrijenhoek, R. C.: Blake Ridge methane seeps: characterization of a soft-sediment, chemosynthetically based ecosystem, Deep-Sea Res. I, 50, 281–300, 2003.
Ward, M. E., Shields, J. D., and Van Dover, C. L.: Parasitism in species of Bathymodiolus (Bivalvia: Mytilidae) mussels from deep-sea seep and hydrothermal vents, Dis. Aquat. Org., 62, 1–16, 2004.
Wenzhofer, F. and Glud, R. N.: Benthic carbon mineralization in the Atlantic: a synthesis based on in situ data from the last decade, Deep-Sea Res. I, 49, 1255–1279, 2002.
Wernegreen, J. J., Degnan, P. H., Lazarus, A. B., Palacios, C., and Bordenstein, S. R.: Genome evolution in insect cells: distinct features of an ant-bacterial relationship, Biol. Bull., 204, 221–231, 2003.
Williams, S. T., Taylor, J. D., and Glover, E.: Molecular phylogeny of the Lucinoidea (Bivalvia): nonmonophyly and separate acquisition of bacterial chemosymbiosis, J. Moll. Stud., 70, 187–202, 2004.
Won, Y., Young, C. R., Lutz, R. A., and Vrijenhoek, R. C.: Dispersal barriers and isolation among deep-sea mussel populations (Mytilidae: Bathymodiolus) from Eastern Pacific hydrothermal vents, Mar. Ecol., 12, 169–184, 2003.
Won, Y. J., Jones, W. J., and Vrijenhoek, R. C.: Absence of cospeciation between deep-sea mytilids and their thiotrophic symbionts, J. Shellfish Res., 27, 129–138, 2008.
Young, C. M., He, R., Emlet, R. B., Li, Y., Qian, H., Arellano, S. M., Van Gaest, A., Bennett, K. C., Wolf, M., Smart, T. I., and Rice, M. E.: Dispersal of deep-sea larvae from the intra-American seas: simulations of trajectories using Ocean models, Integr. Comp. Biol., 52, 483–496, 2012.
Zielinski, F. U., Pernthaler, A., Duperron, S., Raggi, L., Giere, O., Borowski, C., and Dubilier, N.: Widespread occurrence of an intranuclear bacterial parasite in vent and seep bathymodiolin mussels, Environ. Microbiol., 11, 1150–1167, 2009.
Special issue
Altmetrics
Final-revised paper
Preprint