Articles | Volume 11, issue 20
Biogeosciences, 11, 5675–5686, 2014
https://doi.org/10.5194/bg-11-5675-2014
© Author(s) 2014. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
Special issue: Integrated Land Ecosystem-Atmosphere Processes Study (iLEAPS)...
Biogeosciences, 11, 5675–5686, 2014
https://doi.org/10.5194/bg-11-5675-2014
© Author(s) 2014. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
Research article 16 Oct 2014
Research article | 16 Oct 2014
Soil–atmosphere exchange of ammonia in a non-fertilized grassland: measured emission potentials and inferred fluxes
G. R. Wentworth et al.
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Travis W. Tokarek, Charles A. Odame-Ankrah, Jennifer A. Huo, Robert McLaren, Alex K. Y. Lee, Max G. Adam, Megan D. Willis, Jonathan P. D. Abbatt, Cristian Mihele, Andrea Darlington, Richard L. Mittermeier, Kevin Strawbridge, Katherine L. Hayden, Jason S. Olfert, Elijah G. Schnitzler, Duncan K. Brownsey, Faisal V. Assad, Gregory R. Wentworth, Alex G. Tevlin, Douglas E. J. Worthy, Shao-Meng Li, John Liggio, Jeffrey R. Brook, and Hans D. Osthoff
Atmos. Chem. Phys., 18, 17819–17841, https://doi.org/10.5194/acp-18-17819-2018, https://doi.org/10.5194/acp-18-17819-2018, 2018
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Measurements of air pollutants at a ground site near Fort McKay in the Athabasca oil sands region in the summer of 2013 are presented. A large number of intermediate-volatility organic compounds (IVOCs) were observed; these molecules were shown previously to generate atmospheric particles downwind of the region. A principal component analysis was performed to identify major pollution source types, including which source(s) is(are) associated with IVOC emissions (e.g., freshly mined bitumen).
Cynthia H. Whaley, Paul A. Makar, Mark W. Shephard, Leiming Zhang, Junhua Zhang, Qiong Zheng, Ayodeji Akingunola, Gregory R. Wentworth, Jennifer G. Murphy, Shailesh K. Kharol, and Karen E. Cady-Pereira
Atmos. Chem. Phys., 18, 2011–2034, https://doi.org/10.5194/acp-18-2011-2018, https://doi.org/10.5194/acp-18-2011-2018, 2018
Short summary
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Using a modified air quality forecasting model, we have found that a significant fraction (> 50 %) of ambient ammonia comes from re-emission from plants and soils in the broader Athabasca Oil Sands region and much of Alberta and Saskatchewan. We also found that about 20 % of ambient ammonia in Alberta and Saskatchewan came from forest fires in the summer of 2013. The addition of these two processes improved modelled ammonia, which was a motivating factor in undertaking this research.
Gregory R. Wentworth, Jennifer G. Murphy, Katherine B. Benedict, Evelyn J. Bangs, and Jeffrey L. Collett Jr.
Atmos. Chem. Phys., 16, 7435–7449, https://doi.org/10.5194/acp-16-7435-2016, https://doi.org/10.5194/acp-16-7435-2016, 2016
Short summary
Short summary
The influence of dew on atmospheric composition is poorly understood. Results from this work show that dew can uptake a significant fraction (roughly two-thirds) of boundary layer gas-phase ammonia. Furthermore, an average of 95 % of the ammonia sequestered in dew is released back to the atmosphere the following morning during dew evaporation. Dew has the ability to affect air quality and N-deposition and should be considered when modelling ammonia concentrations, as well as other soluble gases.
Gregory R. Wentworth, Jennifer G. Murphy, Betty Croft, Randall V. Martin, Jeffrey R. Pierce, Jean-Sébastien Côté, Isabelle Courchesne, Jean-Éric Tremblay, Jonathan Gagnon, Jennie L. Thomas, Sangeeta Sharma, Desiree Toom-Sauntry, Alina Chivulescu, Maurice Levasseur, and Jonathan P. D. Abbatt
Atmos. Chem. Phys., 16, 1937–1953, https://doi.org/10.5194/acp-16-1937-2016, https://doi.org/10.5194/acp-16-1937-2016, 2016
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Air near the surface in the summertime Arctic is extremely clean and typically has very low concentrations of both gases and particles. However, atmospheric measurements taken throughout the Canadian Arctic in the summer of 2014 revealed higher-than-expected amounts of gaseous ammonia. It is likely the majority of this ammonia is coming from migratory seabird colonies throughout the Arctic. Seabird guano (dung) releases ammonia which could impact climate and sensitive Arctic ecosystems.
N. Borduas, B. Place, G. R. Wentworth, J. P. D. Abbatt, and J. G. Murphy
Atmos. Chem. Phys., 16, 703–714, https://doi.org/10.5194/acp-16-703-2016, https://doi.org/10.5194/acp-16-703-2016, 2016
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HNCO is a toxic molecule and can cause cardiovascular and cataract problems through protein carbamylation once inhaled. Recently reported ambient measurements of HNCO in North America raise concerns for human exposure. To better understand HNCO's loss processes and behaviour in the atmosphere, we provide thermochemical data on HNCO. The parameters allow for more accurate predictions of its lifetime in the atmosphere and consequently help define exposure of this toxic molecule.
Dandan Wei, Hariprasad D. Alwe, Dylan B. Millet, Brandon Bottorff, Michelle Lew, Philip S. Stevens, Joshua D. Shutter, Joshua L. Cox, Frank N. Keutsch, Qianwen Shi, Sarah C. Kavassalis, Jennifer G. Murphy, Krystal T. Vasquez, Hannah M. Allen, Eric Praske, John D. Crounse, Paul O. Wennberg, Paul B. Shepson, Alexander A. T. Bui, Henry W. Wallace, Robert J. Griffin, Nathaniel W. May, Megan Connor, Jonathan H. Slade, Kerri A. Pratt, Ezra C. Wood, Mathew Rollings, Benjamin L. Deming, Daniel C. Anderson, and Allison L. Steiner
Geosci. Model Dev., 14, 6309–6329, https://doi.org/10.5194/gmd-14-6309-2021, https://doi.org/10.5194/gmd-14-6309-2021, 2021
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Over the past decade, understanding of isoprene oxidation has improved, and proper representation of isoprene oxidation and isoprene-derived SOA (iSOA) formation in canopy–chemistry models is now recognized to be important for an accurate understanding of forest–atmosphere exchange. The updated FORCAsT version 2.0 improves the estimation of some isoprene oxidation products and is one of the few canopy models currently capable of simulating SOA formation from monoterpenes and isoprene.
Amy Hrdina, Jennifer G. Murphy, Anna Gannet Hallar, John C. Lin, Alexander Moravek, Ryan Bares, Ross C. Petersen, Alessandro Franchin, Ann M. Middlebrook, Lexie Goldberger, Ben H. Lee, Munkh Baasandorj, and Steven S. Brown
Atmos. Chem. Phys., 21, 8111–8126, https://doi.org/10.5194/acp-21-8111-2021, https://doi.org/10.5194/acp-21-8111-2021, 2021
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Wintertime air pollution in the Salt Lake Valley is primarily composed of ammonium nitrate, which is formed when gas-phase ammonia and nitric acid react. The major point in this work is that the chemical composition of snow tells a very different story to what we measured in the atmosphere. With the dust–sea salt cations observed in PM2.5 and particle sizing data, we can estimate how much nitric acid may be lost to dust–sea salt that is not accounted for and how much more PM2.5 this could form.
Alexander Moravek, Jennifer G. Murphy, Amy Hrdina, John C. Lin, Christopher Pennell, Alessandro Franchin, Ann M. Middlebrook, Dorothy L. Fibiger, Caroline C. Womack, Erin E. McDuffie, Randal Martin, Kori Moore, Munkhbayar Baasandorj, and Steven S. Brown
Atmos. Chem. Phys., 19, 15691–15709, https://doi.org/10.5194/acp-19-15691-2019, https://doi.org/10.5194/acp-19-15691-2019, 2019
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Ammonium nitrate is a major component of fine particulate matter of wintertime air pollution in the Great Salt Lake Region (UT, USA). We investigate the sources of ammonia in the region by using aircraft observations and comparing them to modelled ammonia mixing ratios based on emission inventory estimates. The results suggest that ammonia emissions are underestimated, specifically in regions with high agricultural activity, while ammonia in Salt Lake City is mainly of local origin.
Alexander Moravek, Saumya Singh, Elizabeth Pattey, Luc Pelletier, and Jennifer G. Murphy
Atmos. Meas. Tech., 12, 6059–6078, https://doi.org/10.5194/amt-12-6059-2019, https://doi.org/10.5194/amt-12-6059-2019, 2019
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Determination of ecosystem exchange fluxes using the eddy covariance technique requires measurements with a fast time response. For ammonia, the time response is limited by adsorption and desorption processes on instrument surfaces, generally leading to a substantial underestimation of fluxes. Based on a 5-month flux dataset, we propose a new method to correct for the ammonia flux loss that is better suited to account for factors like surface aging and contamination than other approaches.
Betty Croft, Randall V. Martin, W. Richard Leaitch, Julia Burkart, Rachel Y.-W. Chang, Douglas B. Collins, Patrick L. Hayes, Anna L. Hodshire, Lin Huang, John K. Kodros, Alexander Moravek, Emma L. Mungall, Jennifer G. Murphy, Sangeeta Sharma, Samantha Tremblay, Gregory R. Wentworth, Megan D. Willis, Jonathan P. D. Abbatt, and Jeffrey R. Pierce
Atmos. Chem. Phys., 19, 2787–2812, https://doi.org/10.5194/acp-19-2787-2019, https://doi.org/10.5194/acp-19-2787-2019, 2019
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Summertime Arctic atmospheric aerosols are strongly controlled by processes related to natural regional sources. We use a chemical transport model with size-resolved aerosol microphysics to interpret measurements made during summertime 2016 in the Canadian Arctic Archipelago. Our results explore the processes that control summertime aerosol size distributions and support a climate-relevant role for Arctic marine secondary organic aerosol formed from precursor vapors with Arctic marine sources.
Victoria E. Irish, Sarah J. Hanna, Megan D. Willis, Swarup China, Jennie L. Thomas, Jeremy J. B. Wentzell, Ana Cirisan, Meng Si, W. Richard Leaitch, Jennifer G. Murphy, Jonathan P. D. Abbatt, Alexander Laskin, Eric Girard, and Allan K. Bertram
Atmos. Chem. Phys., 19, 1027–1039, https://doi.org/10.5194/acp-19-1027-2019, https://doi.org/10.5194/acp-19-1027-2019, 2019
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Ice nucleating particles (INPs) are atmospheric particles that catalyse the formation of ice crystals in clouds. INPs influence the Earth's radiative balance and hydrological cycle. In this study we measured the concentrations of INPs in the Canadian Arctic marine boundary layer. Average INP concentrations fell within the range measured in other marine boundary layer locations. We also found that mineral dust is a more important contributor to the INP population than sea spray aerosol.
Travis W. Tokarek, Charles A. Odame-Ankrah, Jennifer A. Huo, Robert McLaren, Alex K. Y. Lee, Max G. Adam, Megan D. Willis, Jonathan P. D. Abbatt, Cristian Mihele, Andrea Darlington, Richard L. Mittermeier, Kevin Strawbridge, Katherine L. Hayden, Jason S. Olfert, Elijah G. Schnitzler, Duncan K. Brownsey, Faisal V. Assad, Gregory R. Wentworth, Alex G. Tevlin, Douglas E. J. Worthy, Shao-Meng Li, John Liggio, Jeffrey R. Brook, and Hans D. Osthoff
Atmos. Chem. Phys., 18, 17819–17841, https://doi.org/10.5194/acp-18-17819-2018, https://doi.org/10.5194/acp-18-17819-2018, 2018
Short summary
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Measurements of air pollutants at a ground site near Fort McKay in the Athabasca oil sands region in the summer of 2013 are presented. A large number of intermediate-volatility organic compounds (IVOCs) were observed; these molecules were shown previously to generate atmospheric particles downwind of the region. A principal component analysis was performed to identify major pollution source types, including which source(s) is(are) associated with IVOC emissions (e.g., freshly mined bitumen).
Alessandro Franchin, Dorothy L. Fibiger, Lexie Goldberger, Erin E. McDuffie, Alexander Moravek, Caroline C. Womack, Erik T. Crosman, Kenneth S. Docherty, William P. Dube, Sebastian W. Hoch, Ben H. Lee, Russell Long, Jennifer G. Murphy, Joel A. Thornton, Steven S. Brown, Munkhbayar Baasandorj, and Ann M. Middlebrook
Atmos. Chem. Phys., 18, 17259–17276, https://doi.org/10.5194/acp-18-17259-2018, https://doi.org/10.5194/acp-18-17259-2018, 2018
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We present the results of aerosol and trace gas measurements from airborne and ground-based platforms. The measurements took place in January–February 2017 in northern Utah as part of the Utah Winter Fine Particulate Study (UWFPS). We characterized the chemical composition of PM1 on a regional scale, also probing the vertical dimension. We used a thermodynamic model to study the effectiveness of limiting total ammonium or total nitrate as a strategy to control aerosol concentrations.
Emma L. Mungall, Jonathan P. D. Abbatt, Jeremy J. B. Wentzell, Gregory R. Wentworth, Jennifer G. Murphy, Daniel Kunkel, Ellen Gute, David W. Tarasick, Sangeeta Sharma, Christopher J. Cox, Taneil Uttal, and John Liggio
Atmos. Chem. Phys., 18, 10237–10254, https://doi.org/10.5194/acp-18-10237-2018, https://doi.org/10.5194/acp-18-10237-2018, 2018
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We measured gas-phase formic and acetic acid at Alert, Nunavut. These acids play an important role in cloud water acidity in remote environments, yet they are not well represented in chemical transport models, particularly in the Arctic. We observed high levels of formic and acetic acid under both cold, wet, and cloudy and warm, sunny, and dry conditions, suggesting that multiple sources significantly contribute to gas-phase concentrations of these species in the summer Arctic.
Stephanie C. Pugliese, Jennifer G. Murphy, Felix R. Vogel, Michael D. Moran, Junhua Zhang, Qiong Zheng, Craig A. Stroud, Shuzhan Ren, Douglas Worthy, and Gregoire Broquet
Atmos. Chem. Phys., 18, 3387–3401, https://doi.org/10.5194/acp-18-3387-2018, https://doi.org/10.5194/acp-18-3387-2018, 2018
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We developed the Southern Ontario CO2 Emissions (SOCE) inventory, which identifies the spatial and temporal distribution (2.5 km and hourly, respectively) of CO2 emissions from seven source sectors. When the SOCE inventory was used with a chemistry transport model, we found strong agreement between modelled and measured mixing ratios. We were able to quantify that natural gas combustion contributes > 80 % of CO2 emissions at nighttime while on-road emissions contribute > 70 % during the day.
Cynthia H. Whaley, Paul A. Makar, Mark W. Shephard, Leiming Zhang, Junhua Zhang, Qiong Zheng, Ayodeji Akingunola, Gregory R. Wentworth, Jennifer G. Murphy, Shailesh K. Kharol, and Karen E. Cady-Pereira
Atmos. Chem. Phys., 18, 2011–2034, https://doi.org/10.5194/acp-18-2011-2018, https://doi.org/10.5194/acp-18-2011-2018, 2018
Short summary
Short summary
Using a modified air quality forecasting model, we have found that a significant fraction (> 50 %) of ambient ammonia comes from re-emission from plants and soils in the broader Athabasca Oil Sands region and much of Alberta and Saskatchewan. We also found that about 20 % of ambient ammonia in Alberta and Saskatchewan came from forest fires in the summer of 2013. The addition of these two processes improved modelled ammonia, which was a motivating factor in undertaking this research.
Chantelle R. Lonsdale, Jennifer D. Hegarty, Karen E. Cady-Pereira, Matthew J. Alvarado, Daven K. Henze, Matthew D. Turner, Shannon L. Capps, John B. Nowak, J. Andy Neuman, Ann M. Middlebrook, Roya Bahreini, Jennifer G. Murphy, Milos Z. Markovic, Trevor C. VandenBoer, Lynn M. Russell, and Amy Jo Scarino
Atmos. Chem. Phys., 17, 2721–2739, https://doi.org/10.5194/acp-17-2721-2017, https://doi.org/10.5194/acp-17-2721-2017, 2017
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This study takes advantage of the high-resolution observations of NH3(g) made by the TES satellite instrument over Bakersfield during the CalNex campaign, along with campaign measurements, to compare CMAQ model results in the San Joaquin Valley, California. Additionally we evaluate the CMAQ bi-directional ammonia flux results using the CARB emissions inventory against these satellite and campaign measurements, not previously explored in combination.
Gregory R. Wentworth, Jennifer G. Murphy, Katherine B. Benedict, Evelyn J. Bangs, and Jeffrey L. Collett Jr.
Atmos. Chem. Phys., 16, 7435–7449, https://doi.org/10.5194/acp-16-7435-2016, https://doi.org/10.5194/acp-16-7435-2016, 2016
Short summary
Short summary
The influence of dew on atmospheric composition is poorly understood. Results from this work show that dew can uptake a significant fraction (roughly two-thirds) of boundary layer gas-phase ammonia. Furthermore, an average of 95 % of the ammonia sequestered in dew is released back to the atmosphere the following morning during dew evaporation. Dew has the ability to affect air quality and N-deposition and should be considered when modelling ammonia concentrations, as well as other soluble gases.
Emma L. Mungall, Betty Croft, Martine Lizotte, Jennie L. Thomas, Jennifer G. Murphy, Maurice Levasseur, Randall V. Martin, Jeremy J. B. Wentzell, John Liggio, and Jonathan P. D. Abbatt
Atmos. Chem. Phys., 16, 6665–6680, https://doi.org/10.5194/acp-16-6665-2016, https://doi.org/10.5194/acp-16-6665-2016, 2016
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Previous work has suggested that marine emissions of dimethyl sulfide (DMS) could impact the Arctic climate through interactions with clouds. We made the first high-time-resolution measurements of summertime atmospheric DMS in the Canadian Arctic, and performed source sensitivity simulations. We found that regional marine sources dominated, but do not appear to be sufficient to explain our observations. Understanding DMS sources in the Arctic is necessary to model future climate in the region.
Gregory R. Wentworth, Jennifer G. Murphy, Betty Croft, Randall V. Martin, Jeffrey R. Pierce, Jean-Sébastien Côté, Isabelle Courchesne, Jean-Éric Tremblay, Jonathan Gagnon, Jennie L. Thomas, Sangeeta Sharma, Desiree Toom-Sauntry, Alina Chivulescu, Maurice Levasseur, and Jonathan P. D. Abbatt
Atmos. Chem. Phys., 16, 1937–1953, https://doi.org/10.5194/acp-16-1937-2016, https://doi.org/10.5194/acp-16-1937-2016, 2016
Short summary
Short summary
Air near the surface in the summertime Arctic is extremely clean and typically has very low concentrations of both gases and particles. However, atmospheric measurements taken throughout the Canadian Arctic in the summer of 2014 revealed higher-than-expected amounts of gaseous ammonia. It is likely the majority of this ammonia is coming from migratory seabird colonies throughout the Arctic. Seabird guano (dung) releases ammonia which could impact climate and sensitive Arctic ecosystems.
N. Borduas, B. Place, G. R. Wentworth, J. P. D. Abbatt, and J. G. Murphy
Atmos. Chem. Phys., 16, 703–714, https://doi.org/10.5194/acp-16-703-2016, https://doi.org/10.5194/acp-16-703-2016, 2016
Short summary
Short summary
HNCO is a toxic molecule and can cause cardiovascular and cataract problems through protein carbamylation once inhaled. Recently reported ambient measurements of HNCO in North America raise concerns for human exposure. To better understand HNCO's loss processes and behaviour in the atmosphere, we provide thermochemical data on HNCO. The parameters allow for more accurate predictions of its lifetime in the atmosphere and consequently help define exposure of this toxic molecule.
S. C. Pugliese, J. G. Murphy, J. A. Geddes, and J. M. Wang
Atmos. Chem. Phys., 14, 8197–8207, https://doi.org/10.5194/acp-14-8197-2014, https://doi.org/10.5194/acp-14-8197-2014, 2014
E. A. Marais, D. J. Jacob, A. Guenther, K. Chance, T. P. Kurosu, J. G. Murphy, C. E. Reeves, and H. O. T. Pye
Atmos. Chem. Phys., 14, 7693–7703, https://doi.org/10.5194/acp-14-7693-2014, https://doi.org/10.5194/acp-14-7693-2014, 2014
D. R. Gentner, T. B. Ford, A. Guha, K. Boulanger, J. Brioude, W. M. Angevine, J. A. de Gouw, C. Warneke, J. B. Gilman, T. B. Ryerson, J. Peischl, S. Meinardi, D. R. Blake, E. Atlas, W. A. Lonneman, T. E. Kleindienst, M. R. Beaver, J. M. St. Clair, P. O. Wennberg, T. C. VandenBoer, M. Z. Markovic, J. G. Murphy, R. A. Harley, and A. H. Goldstein
Atmos. Chem. Phys., 14, 4955–4978, https://doi.org/10.5194/acp-14-4955-2014, https://doi.org/10.5194/acp-14-4955-2014, 2014
J. A. Geddes and J. G. Murphy
Atmos. Chem. Phys., 14, 2939–2957, https://doi.org/10.5194/acp-14-2939-2014, https://doi.org/10.5194/acp-14-2939-2014, 2014
J. M. Wang, J. G. Murphy, J. A. Geddes, C. L. Winsborough, N. Basiliko, and S. C. Thomas
Biogeosciences, 10, 4371–4382, https://doi.org/10.5194/bg-10-4371-2013, https://doi.org/10.5194/bg-10-4371-2013, 2013
Related subject area
Biogeochemistry: Air - Land Exchange
Choosing an optimal β factor for relaxed eddy accumulation applications across vegetated and non-vegetated surfaces
Bioaerosols in the Amazon rain forest: temporal variations and vertical profiles of Eukarya, Bacteria, and Archaea
Ice nucleation by viruses and their potential for cloud glaciation
Carbon dioxide fluxes and carbon balance of an agricultural grassland in southern Finland
Mercury accumulation in leaves of different plant types – the significance of tissue age and specific leaf area
Sun-induced fluorescence and near-infrared reflectance of vegetation track the seasonal dynamics of gross primary production over Africa
Measurement and modelling of the dynamics of NH3 surface–atmosphere exchange over the Amazonian rainforest
Isoprene and monoterpene emissions from alder, aspen and spruce short-rotation forest plantations in the United Kingdom
Winter atmospheric nutrient and pollutant deposition on Western Sayan Mountain lakes (Siberia)
Subpollen particles (SPP) of birch as carriers of ice nucleating macromolecules
Methane efflux from an American bison herd
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A climate-dependent global model of ammonia emissions from chicken farming
Calculating canopy stomatal conductance from eddy covariance measurements, in light of the energy budget closure problem
Decoupling of a Douglas fir canopy: a look into the subcanopy with continuous vertical temperature profiles
Variations in diurnal and seasonal net ecosystem carbon dioxide exchange in a semiarid sandy grassland ecosystem in China's Horqin Sandy Land
Biogenic volatile organic compound ambient mixing ratios and emission rates in the Alaskan Arctic tundra
Surfaces of silver birch (Betula pendula) are sources of biological ice nuclei: in vivo and in situ investigations
Ideas and perspectives: enhancing the impact of the FLUXNET network of eddy covariance sites
Evapotranspiration over agroforestry sites in Germany
OH reactivity from the emissions of different tree species: investigating the missing reactivity in a boreal forest
Vegetation influence and environmental controls on greenhouse gas fluxes from a drained thermokarst lake in the western Canadian Arctic
Examining the link between vegetation leaf area and land–atmosphere exchange of water, energy, and carbon fluxes using FLUXNET data
CloudRoots: integration of advanced instrumental techniques and process modelling of sub-hourly and sub-kilometre land–atmosphere interactions
Environmental controls on ecosystem-scale cold-season methane and carbon dioxide fluxes in an Arctic tundra ecosystem
Distinguishing between early- and late-covering crops in the land surface model Noah-MP: impact on simulated surface energy fluxes and temperature
A robust data cleaning procedure for eddy covariance flux measurements
Scaling carbon fluxes from eddy covariance sites to globe: synthesis and evaluation of the FLUXCOM approach
Leveraging the signature of heterotrophic respiration on atmospheric CO2 for model benchmarking
Estimating causal networks in biosphere–atmosphere interaction with the PCMCI approach
A double peak in the seasonality of California's photosynthesis as observed from space
Nitrogen use efficiency and N2O and NH3 losses attributed to three fertiliser types applied to an intensively managed silage crop
Biogenic isoprenoid emissions under drought stress: different responses for isoprene and terpenes
Insights from mercury stable isotopes on terrestrial–atmosphere exchange of Hg(0) in the Arctic tundra
Reviews and syntheses: Turning the challenges of partitioning ecosystem evaporation and transpiration into opportunities
El Niño–Southern Oscillation (ENSO) event reduces CO2 uptake of an Indonesian oil palm plantation
Carbon–water flux coupling under progressive drought
Reviews and syntheses: influences of landscape structure and land uses on local to regional climate and air quality
Identification of secondary fatty alcohols in atmospheric aerosols in temperate forests
Modelling land–atmosphere daily exchanges of NO, NH3, and CO2 in a semi-arid grazed ecosystem in Senegal
Simulating the atmospheric CO2 concentration across the heterogeneous landscape of Denmark using a coupled atmosphere–biosphere mesoscale model system
Evaluating multi-year, multi-site data on the energy balance closure of eddy-covariance flux measurements at cropland sites in southwestern Germany
Interpreting eddy covariance data from heterogeneous Siberian tundra: land-cover-specific methane fluxes and spatial representativeness
Global atmospheric CO2 inverse models converging on neutral tropical land exchange, but disagreeing on fossil fuel and atmospheric growth rate
Assessing biotic contributions to CO2 fluxes in northern China using the Vegetation, Photosynthesis and Respiration Model (VPRM-CHINA) and observations from 2005 to 2009
Assessing the dynamics of vegetation productivity in circumpolar regions with different satellite indicators of greenness and photosynthesis
Reviews and syntheses: Carbon use efficiency from organisms to ecosystems – definitions, theories, and empirical evidence
Eddy covariance flux errors due to random and systematic timing errors during data acquisition
Synthetic ozone deposition and stomatal uptake at flux tower sites
Integrated management of a Swiss cropland is not sufficient to preserve its soil carbon pool in the long term
Teresa Vogl, Amy Hrdina, and Christoph K. Thomas
Biogeosciences, 18, 5097–5115, https://doi.org/10.5194/bg-18-5097-2021, https://doi.org/10.5194/bg-18-5097-2021, 2021
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The relaxed eddy accumulation technique is a method used for measuring fluxes of chemical species in the atmosphere. It relies on a proportionality factor, β, which can be determined using different methods. Also, different techniques for sampling can be used by only drawing air into the measurement system when vertical wind velocity exceeds a certain threshold. We compare different ways to obtain β and different threshold techniques to direct flux measurements for three different sites.
Maria Prass, Meinrat O. Andreae, Alessandro C. de Araùjo, Paulo Artaxo, Florian Ditas, Wolfgang Elbert, Jan-David Förster, Marco Aurélio Franco, Isabella Hrabe de Angelis, Jürgen Kesselmeier, Thomas Klimach, Leslie Ann Kremper, Eckhard Thines, David Walter, Jens Weber, Bettina Weber, Bernhard M. Fuchs, Ulrich Pöschl, and Christopher Pöhlker
Biogeosciences, 18, 4873–4887, https://doi.org/10.5194/bg-18-4873-2021, https://doi.org/10.5194/bg-18-4873-2021, 2021
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Bioaerosols in the atmosphere over the Amazon rain forest were analyzed by molecular biological staining and microscopy. Eukaryotic, bacterial, and archaeal aerosols were quantified in time series and altitude profiles which exhibited clear differences in number concentrations and vertical distributions. Our results provide insights into the sources and dispersion of different Amazonian bioaerosol types as a basis for a better understanding of biosphere–atmosphere interactions.
Michael P. Adams, Nina S. Atanasova, Svetlana Sofieva, Janne Ravantti, Aino Heikkinen, Zoé Brasseur, Jonathan Duplissy, Dennis H. Bamford, and Benjamin J. Murray
Biogeosciences, 18, 4431–4444, https://doi.org/10.5194/bg-18-4431-2021, https://doi.org/10.5194/bg-18-4431-2021, 2021
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The formation of ice in clouds is critically important for the planet's climate. Hence, we need to know which aerosol types nucleate ice and how effectively they do so. Here we show that virus particles, with a range of architectures, nucleate ice when immersed in supercooled water. However, we also show that they only make a minor contribution to the ice-nucleating particle population in the terrestrial atmosphere, but we cannot rule them out as being important in the marine environment.
Laura Heimsch, Annalea Lohila, Juha-Pekka Tuovinen, Henriikka Vekuri, Jussi Heinonsalo, Olli Nevalainen, Mika Korkiakoski, Jari Liski, Tuomas Laurila, and Liisa Kulmala
Biogeosciences, 18, 3467–3483, https://doi.org/10.5194/bg-18-3467-2021, https://doi.org/10.5194/bg-18-3467-2021, 2021
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CO2 and H2O fluxes were measured at a newly established eddy covariance site in southern Finland for 2 years from 2018 to 2020. This agricultural grassland site focuses on the conversion from intensive towards more sustainable agricultural management. The first summer experienced prolonged dry periods, and notably larger fluxes were observed in the second summer. The field acted as a net carbon sink during both study years.
Håkan Pleijel, Jenny Klingberg, Michelle Nerentorp, Malin C. Broberg, Brigitte Nyirambangutse, John Munthe, and Göran Wallin
Biogeosciences Discuss., https://doi.org/10.5194/bg-2021-117, https://doi.org/10.5194/bg-2021-117, 2021
Revised manuscript accepted for BG
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Mercury is a problematic metal in the environment. It is crucial to understand the Hg circulation in ecosystems. We explored the mercury concentration in foliage from a diverse set of plants, locations and sampling periods to study the accumulation of Hg in leaves/needles over time. Mercury was always higher in older tissue: in broadleaved trees, conifers and wheat. Specific leaf area, the leaf area per unit leaf mass, turned out to be critical for Hg accumulation in leaves/needles.
Anteneh Getachew Mengistu, Gizaw Mengistu Tsidu, Gerbrand Koren, Maurits L. Kooreman, K. Folkert Boersma, Torbern Tagesson, Jonas Ardö, Yann Nouvellon, and Wouter Peters
Biogeosciences, 18, 2843–2857, https://doi.org/10.5194/bg-18-2843-2021, https://doi.org/10.5194/bg-18-2843-2021, 2021
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In this study, we assess the usefulness of Sun-Induced Fluorescence of Terrestrial Ecosystems Retrieval (SIFTER) data from the GOME-2A instrument and near-infrared reflectance of vegetation (NIRv) from MODIS to capture the seasonality and magnitudes of gross primary production (GPP) derived from six eddy-covariance flux towers in Africa in the overlap years between 2007–2014. We also test the robustness of sun-induced fluoresence and NIRv to compare the seasonality of GPP for the major biomes.
Robbie Ramsay, Chiara F. Di Marco, Mathew R. Heal, Matthias Sörgel, Paulo Artaxo, Meinrat O. Andreae, and Eiko Nemitz
Biogeosciences, 18, 2809–2825, https://doi.org/10.5194/bg-18-2809-2021, https://doi.org/10.5194/bg-18-2809-2021, 2021
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The exchange of the gas ammonia between the atmosphere and the surface is an important biogeochemical process, but little is known of this exchange for certain ecosystems, such as the Amazon rainforest. This study took measurements of ammonia exchange over an Amazon rainforest site and subsequently modelled the observed deposition and emission patterns. We observed emissions of ammonia from the rainforest, which can be simulated accurately by using a canopy resistance modelling approach.
Gemma Purser, Julia Drewer, Mathew R. Heal, Robert A. S. Sircus, Lara K. Dunn, and James I. L. Morison
Biogeosciences, 18, 2487–2510, https://doi.org/10.5194/bg-18-2487-2021, https://doi.org/10.5194/bg-18-2487-2021, 2021
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Short-rotation forest plantations could help reduce greenhouse gases but can emit biogenic volatile organic compounds. Emissions were measured at a plantation trial in Scotland. Standardised emissions of isoprene from foliage were higher from hybrid aspen than from Sitka spruce and low from Italian alder. Emissions of total monoterpene were lower. The forest floor was only a small source. Model estimates suggest an SRF expansion of 0.7 Mha could increase total UK emissions between < 1 %–35 %.
Daniel Diaz-de-Quijano, Aleksander Vladimirovich Ageev, Elena Anatolevna Ivanova, and Olesia Valerevna Anishchenko
Biogeosciences, 18, 1601–1618, https://doi.org/10.5194/bg-18-1601-2021, https://doi.org/10.5194/bg-18-1601-2021, 2021
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Winter atmospheric nitrogen (N) and phosphorus (P) depositions were measured for the first time in the Western Sayan Mountains (Siberia). The low and very low atmospheric N and P depositions could be responsible for the observed lake phytoplankton N–P colimitation. We hypothesize that slight imbalances in the nutrient deposition, as expected in the context of global change (climate, forest fires and anthropogenic nitrogen emissions), could have important effects on the ecology of these lakes.
Julia Burkart, Jürgen Gratzl, Teresa M. Seifried, Paul Bieber, and Hinrich Grothe
Biogeosciences Discuss., https://doi.org/10.5194/bg-2021-8, https://doi.org/10.5194/bg-2021-8, 2021
Revised manuscript accepted for BG
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Extracts of birch pollen grains are known to be ice nucleation active and thus impact cloud formation and climate. In this study we develop an extraction method to separate subpollen particles from ice nucleating macromolecules. For the first time we show that pure subpollen particles are not ice nucleation active. Our results illustrate that the ice nucleating macromolecules can be washed off the subpollen particles and that the ice activity is linked to the presence of proteins.
Paul C. Stoy, Adam A. Cook, John E. Dore, Natascha Kljun, William Kleindl, E. N. Jack Brookshire, and Tobias Gerken
Biogeosciences, 18, 961–975, https://doi.org/10.5194/bg-18-961-2021, https://doi.org/10.5194/bg-18-961-2021, 2021
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The reintroduction of American bison creates multiple environmental benefits. Ruminants like bison also emit methane – a potent greenhouse gas – to the atmosphere, which has not been measured to date in a field setting. We measured methane efflux from an American bison herd during winter using eddy covariance. Automated cameras were used to approximate their location to calculate per-animal flux. From the measurements, bison do not emit more methane than the cattle they often replace.
Philipp A. Nauer, Eleonora Chiri, Thanavit Jirapanjawat, Chris Greening, and Perran L. M. Cook
Biogeosciences, 18, 729–737, https://doi.org/10.5194/bg-18-729-2021, https://doi.org/10.5194/bg-18-729-2021, 2021
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Hydrogen (H2) and carbon monoxide (CO) are atmospheric trace gases cycled via microbial metabolisms. We observed strong H2 and CO contamination from rubber septa used to seal common gas sample storage vials. Here we propose a simple and inexpensive modification of such vials to allow reliable storage of H2, CO and methane trace-gas samples for timescales of weeks to months, thus enabling extensive field campaigns to investigate H2 and CO biogeochemistry in remote areas.
Jize Jiang, David S. Stevenson, Aimable Uwizeye, Giuseppe Tempio, and Mark A. Sutton
Biogeosciences, 18, 135–158, https://doi.org/10.5194/bg-18-135-2021, https://doi.org/10.5194/bg-18-135-2021, 2021
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Ammonia is a key water and air pollutant and impacts human health and climate change. Ammonia emissions mainly originate from agriculture. We find that chicken agriculture contributes to large ammonia emissions, especially in hot and wet regions. These emissions can be greatly affected by the local environment, i.e. temperature and humidity, and also by human management. We develop a model that suggests ammonia emissions from chicken farming are likely to increase under a warming climate.
Richard Wehr and Scott R. Saleska
Biogeosciences, 18, 13–24, https://doi.org/10.5194/bg-18-13-2021, https://doi.org/10.5194/bg-18-13-2021, 2021
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Water and carbon exchange between plants and the atmosphere is governed by stomata: adjustable pores in the surfaces of leaves. The combined gas conductance of all the stomata in a canopy has long been estimated using an equation that is shown here to be systematically incorrect because it relies on measurements that are generally inadequate. An alternative approach is shown to be more accurate in all probable scenarios and to imply different responses of stomatal conductance to the environment.
Bart Schilperoort, Miriam Coenders-Gerrits, César Jiménez Rodríguez, Christiaan van der Tol, Bas van de Wiel, and Hubert Savenije
Biogeosciences, 17, 6423–6439, https://doi.org/10.5194/bg-17-6423-2020, https://doi.org/10.5194/bg-17-6423-2020, 2020
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With distributed temperature sensing (DTS) we measured a vertical temperature profile in a forest, from the forest floor to above the treetops. Using this temperature profile we can see which parts of the forest canopy are colder (thus more dense) or warmer (and less dense) and study the effect this has on the suppression of turbulent mixing. This can be used to improve our knowledge of the interaction between the atmosphere and forests and improve carbon dioxide flux measurements over forests.
Yayi Niu, Yuqiang Li, Hanbo Yun, Xuyang Wang, Xiangwen Gong, Yulong Duan, and Jing Liu
Biogeosciences, 17, 6309–6326, https://doi.org/10.5194/bg-17-6309-2020, https://doi.org/10.5194/bg-17-6309-2020, 2020
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We report the results from continuous year-round CO2 observations from a sandy grassland in the Horqin Sandy Land using the eddy covariance technique. To quantify the diurnal, seasonal, and annual variation in net ecosystem CO2 exchange, gross primary productivity, and ecosystem respiration and to identify the different scales of environmental factors and the underlying mechanisms, we also explored how the annual precipitation affects the net ecosystem CO2 exchange and its components.
Hélène Angot, Katelyn McErlean, Lu Hu, Dylan B. Millet, Jacques Hueber, Kaixin Cui, Jacob Moss, Catherine Wielgasz, Tyler Milligan, Damien Ketcherside, M. Syndonia Bret-Harte, and Detlev Helmig
Biogeosciences, 17, 6219–6236, https://doi.org/10.5194/bg-17-6219-2020, https://doi.org/10.5194/bg-17-6219-2020, 2020
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We report biogenic volatile organic compounds (BVOCs) ambient levels and emission rates from key vegetation species in the Alaskan arctic tundra, providing a new data set to further constrain isoprene chemistry under low NOx conditions in models. We add to the growing body of evidence that climate-induced changes in the vegetation composition will significantly affect the BVOC emission potential of the tundra, with implications for atmospheric oxidation processes and climate feedbacks.
Teresa M. Seifried, Paul Bieber, Laura Felgitsch, Julian Vlasich, Florian Reyzek, David G. Schmale III, and Hinrich Grothe
Biogeosciences, 17, 5655–5667, https://doi.org/10.5194/bg-17-5655-2020, https://doi.org/10.5194/bg-17-5655-2020, 2020
Dario Papale
Biogeosciences, 17, 5587–5598, https://doi.org/10.5194/bg-17-5587-2020, https://doi.org/10.5194/bg-17-5587-2020, 2020
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FLUXNET is a large, bottom-up, self-coordinated network of sites. It provided ecosystem–atmosphere greenhouse gas fluxes from stations around the world that were used as bases for a large number of publications and studies. Today many applications require recent updates on the data to track more closely the ecosystem responses to climate change and link ground data with satellite programs. For this reason, a new organization of FLUXNET is needed, keeping as its target the FAIR principles.
Christian Markwitz, Alexander Knohl, and Lukas Siebicke
Biogeosciences, 17, 5183–5208, https://doi.org/10.5194/bg-17-5183-2020, https://doi.org/10.5194/bg-17-5183-2020, 2020
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Agroforestry has been shown to alter the microclimate and to lead to higher carbon sequestration above ground and in the soil. In this study, we investigated the impact of agroforestry systems on system-scale evapotranspiration (ET) due to concerns about increased water losses to the atmosphere. Results showed small differences in annual sums of ET over agroforestry relative to monoculture systems, indicating that agroforestry in Germany can be a land use alternative to monoculture agriculture.
Arnaud P. Praplan, Toni Tykkä, Simon Schallhart, Virpi Tarvainen, Jaana Bäck, and Heidi Hellén
Biogeosciences, 17, 4681–4705, https://doi.org/10.5194/bg-17-4681-2020, https://doi.org/10.5194/bg-17-4681-2020, 2020
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In this paper, we study emissions of volatile organic compounds (VOCs) from three boreal tree species. Individual compounds are quantified with on-line separation analytical techniques, while the total reactivity of the emissions is measured using a custom-built instrument. On some occasions, in particular when the trees suffer from stress, the total reactivity measured is higher than the sum of the reactivity of individual compounds. This indicates that the threes emit VOCs that remain unknown.
June Skeeter, Andreas Christen, Andrée-Anne Laforce, Elyn Humphreys, and Greg Henry
Biogeosciences, 17, 4421–4441, https://doi.org/10.5194/bg-17-4421-2020, https://doi.org/10.5194/bg-17-4421-2020, 2020
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This study investigates carbon fluxes at Illisarvik, an artificial drained thermokarst lake basin (DTLB) in Canada's Northwest Territories. This is the first carbon balance study in a DTLB outside of Alaska. We used neural networks to identify the factors controlling fluxes and to model the effects of the controlling factors. We discuss the role of vegetation heterogeneity in fluxes, especially of methane, and we show how the carbon fluxes differ from Alaskan DTLBs.
Anne J. Hoek van Dijke, Kaniska Mallick, Martin Schlerf, Miriam Machwitz, Martin Herold, and Adriaan J. Teuling
Biogeosciences, 17, 4443–4457, https://doi.org/10.5194/bg-17-4443-2020, https://doi.org/10.5194/bg-17-4443-2020, 2020
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We investigated the link between the vegetation leaf area index (LAI) and the land–atmosphere exchange of water, energy, and carbon fluxes. We show that the correlation between the LAI and water and energy fluxes depends on the vegetation type and aridity. For carbon fluxes, however, the correlation with the LAI was strong and independent of vegetation and aridity. This study provides insight into when the vegetation LAI can be used to model or extrapolate land–atmosphere fluxes.
Jordi Vilà-Guerau de Arellano, Patrizia Ney, Oscar Hartogensis, Hugo de Boer, Kevin van Diepen, Dzhaner Emin, Geiske de Groot, Anne Klosterhalfen, Matthias Langensiepen, Maria Matveeva, Gabriela Miranda-García, Arnold F. Moene, Uwe Rascher, Thomas Röckmann, Getachew Adnew, Nicolas Brüggemann, Youri Rothfuss, and Alexander Graf
Biogeosciences, 17, 4375–4404, https://doi.org/10.5194/bg-17-4375-2020, https://doi.org/10.5194/bg-17-4375-2020, 2020
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The CloudRoots field experiment has obtained an open comprehensive observational data set that includes soil, plant, and atmospheric variables to investigate the interactions between a heterogeneous land surface and its overlying atmospheric boundary layer, including the rapid perturbations of clouds in evapotranspiration. Our findings demonstrate that in order to understand and represent diurnal variability, we need to measure and model processes from the leaf to the landscape scales.
Dean Howard, Yannick Agnan, Detlev Helmig, Yu Yang, and Daniel Obrist
Biogeosciences, 17, 4025–4042, https://doi.org/10.5194/bg-17-4025-2020, https://doi.org/10.5194/bg-17-4025-2020, 2020
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The Arctic tundra represents a vast store of carbon that may be broken down by microbial activity into greenhouse gases such as CO2 and CH4. Though microbes are less active in winter, the long duration of the cold season makes this period very important for carbon cycling. We show that, under conditions of warmer winter air temperatures and greater snowfall, deeper soils can remain warm enough to sustain significantly enhanced CH4 emission. This could have large implications for future climates.
Kristina Bohm, Joachim Ingwersen, Josipa Milovac, and Thilo Streck
Biogeosciences, 17, 2791–2805, https://doi.org/10.5194/bg-17-2791-2020, https://doi.org/10.5194/bg-17-2791-2020, 2020
Domenico Vitale, Gerardo Fratini, Massimo Bilancia, Giacomo Nicolini, Simone Sabbatini, and Dario Papale
Biogeosciences, 17, 1367–1391, https://doi.org/10.5194/bg-17-1367-2020, https://doi.org/10.5194/bg-17-1367-2020, 2020
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This work describes a data cleaning procedure for the detection of eddy covariance fluxes affected by systematic errors. We believe that the proposed procedure can serve as a basis toward a unified quality control strategy suitable for the centralized data processing pipelines, where the use of completely data-driven and scalable procedures that guarantee high-quality standards and reproducibility of the released products constitutes an essential prerequisite.
Martin Jung, Christopher Schwalm, Mirco Migliavacca, Sophia Walther, Gustau Camps-Valls, Sujan Koirala, Peter Anthoni, Simon Besnard, Paul Bodesheim, Nuno Carvalhais, Frédéric Chevallier, Fabian Gans, Daniel S. Goll, Vanessa Haverd, Philipp Köhler, Kazuhito Ichii, Atul K. Jain, Junzhi Liu, Danica Lombardozzi, Julia E. M. S. Nabel, Jacob A. Nelson, Michael O'Sullivan, Martijn Pallandt, Dario Papale, Wouter Peters, Julia Pongratz, Christian Rödenbeck, Stephen Sitch, Gianluca Tramontana, Anthony Walker, Ulrich Weber, and Markus Reichstein
Biogeosciences, 17, 1343–1365, https://doi.org/10.5194/bg-17-1343-2020, https://doi.org/10.5194/bg-17-1343-2020, 2020
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We test the approach of producing global gridded carbon fluxes based on combining machine learning with local measurements, remote sensing and climate data. We show that we can reproduce seasonal variations in carbon assimilated by plants via photosynthesis and in ecosystem net carbon balance. The ecosystem’s mean carbon balance and carbon flux trends require cautious interpretation. The analysis paves the way for future improvements of the data-driven assessment of carbon fluxes.
Samantha J. Basile, Xin Lin, William R. Wieder, Melannie D. Hartman, and Gretchen Keppel-Aleks
Biogeosciences, 17, 1293–1308, https://doi.org/10.5194/bg-17-1293-2020, https://doi.org/10.5194/bg-17-1293-2020, 2020
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Soil heterotrophic respiration (HR) is an important component of land–atmosphere carbon exchange but is difficult to observe globally. We analyzed the imprint that this flux leaves on atmospheric CO2 using a set of simulations from HR models with common inputs. Models that represent microbial processes are more variable and have stronger temperature sensitivity than those that do not. Our results show that we can use atmospheric CO2 observations to evaluate and improve models of HR.
Christopher Krich, Jakob Runge, Diego G. Miralles, Mirco Migliavacca, Oscar Perez-Priego, Tarek El-Madany, Arnaud Carrara, and Miguel D. Mahecha
Biogeosciences, 17, 1033–1061, https://doi.org/10.5194/bg-17-1033-2020, https://doi.org/10.5194/bg-17-1033-2020, 2020
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Causal inference promises new insight into biosphere–atmosphere interactions using time series only. To understand the behaviour of a specific method on such data, we used artificial and observation-based data. The observed structures are very interpretable and reveal certain ecosystem-specific behaviour, as only a few relevant links remain, in contrast to pure correlation techniques. Thus, causal inference allows to us gain well-constrained insights into processes and interactions.
Alexander J. Turner, Philipp Köhler, Troy S. Magney, Christian Frankenberg, Inez Fung, and Ronald C. Cohen
Biogeosciences, 17, 405–422, https://doi.org/10.5194/bg-17-405-2020, https://doi.org/10.5194/bg-17-405-2020, 2020
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We present the highest resolution solar-induced chlorophyll fluorescence (SIF) dataset from satellite measurements, providing previously unobservable phenomena related to plant photosynthesis. We find a strong correspondence between TROPOMI SIF and AmeriFlux GPP. We then observe a double peak in the seasonality of California's photosynthesis, not seen by traditional vegetation indices (e.g., MODIS). This is further corroborated by EOF/PC analysis.
Nicholas Cowan, Peter Levy, Andrea Moring, Ivan Simmons, Colin Bache, Amy Stephens, Joana Marinheiro, Jocelyn Brichet, Ling Song, Amy Pickard, Connie McNeill, Roseanne McDonald, Juliette Maire, Benjamin Loubet, Polina Voylokov, Mark Sutton, and Ute Skiba
Biogeosciences, 16, 4731–4745, https://doi.org/10.5194/bg-16-4731-2019, https://doi.org/10.5194/bg-16-4731-2019, 2019
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Commonly used nitrogen fertilisers, ammonium nitrate, urea and urea coated with a urease inhibitor, were applied to experimental plots. Fertilisation with ammonium nitrate supported the largest yields but also resulted in the largest nitrous oxide emissions. Urea was the largest emitter of ammonia. The coated urea did not significantly increase yields; however, ammonia emissions were substantially smaller than urea. The coated urea was the best environmentally but is economically unattractive.
Boris Bonn, Ruth-Kristina Magh, Joseph Rombach, and Jürgen Kreuzwieser
Biogeosciences, 16, 4627–4645, https://doi.org/10.5194/bg-16-4627-2019, https://doi.org/10.5194/bg-16-4627-2019, 2019
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The effect of soil water availability (SWA) on emissions of isoprenoids by trees was studied by setting up a parameterization from published data. SWA impact on isoprene emissions can be described by a growth type curve, while monoterpene emissions display a pattern reflecting plants’ stomata opening. Sesquiterpene fluxes tend to increase at the start of severe drought until resources decline. Feedbacks on atmospheric processes such as ozone and aerosol particles are further studied.
Martin Jiskra, Jeroen E. Sonke, Yannick Agnan, Detlev Helmig, and Daniel Obrist
Biogeosciences, 16, 4051–4064, https://doi.org/10.5194/bg-16-4051-2019, https://doi.org/10.5194/bg-16-4051-2019, 2019
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The tundra plays a pivotal role in Arctic mercury cycling by storing atmospheric mercury deposition and shuttling it to the Arctic Ocean. We used the isotopic fingerprint of mercury to investigate the processes controlling atmospheric mercury deposition. We found that the uptake of atmospheric mercury by vegetation was the major deposition source. Direct deposition to snow or soils only played a minor role. These results improve our understanding of Arctic mercury cycling.
Paul C. Stoy, Tarek S. El-Madany, Joshua B. Fisher, Pierre Gentine, Tobias Gerken, Stephen P. Good, Anne Klosterhalfen, Shuguang Liu, Diego G. Miralles, Oscar Perez-Priego, Angela J. Rigden, Todd H. Skaggs, Georg Wohlfahrt, Ray G. Anderson, A. Miriam J. Coenders-Gerrits, Martin Jung, Wouter H. Maes, Ivan Mammarella, Matthias Mauder, Mirco Migliavacca, Jacob A. Nelson, Rafael Poyatos, Markus Reichstein, Russell L. Scott, and Sebastian Wolf
Biogeosciences, 16, 3747–3775, https://doi.org/10.5194/bg-16-3747-2019, https://doi.org/10.5194/bg-16-3747-2019, 2019
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Key findings are the nearly optimal response of T to atmospheric water vapor pressure deficits across methods and scales. Additionally, the notion that T / ET intermittently approaches 1, which is a basis for many partitioning methods, does not hold for certain methods and ecosystems. To better constrain estimates of E and T from combined ET measurements, we propose a combination of independent measurement techniques to better constrain E and T at the ecosystem scale.
Christian Stiegler, Ana Meijide, Yuanchao Fan, Ashehad Ashween Ali, Tania June, and Alexander Knohl
Biogeosciences, 16, 2873–2890, https://doi.org/10.5194/bg-16-2873-2019, https://doi.org/10.5194/bg-16-2873-2019, 2019
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We show the response of a commercial oil palm plantation in Indonesia to the extreme El Niño–Southern Oscillation (ENSO) event in 2015. Our measurements and model suggest that without human-induced forest fires and related smoke emissions, the observed negative impact on oil palm carbon dioxide greenhouse gas fluxes, carbon accumulation and yield due to ENSO-related drought would have been less pronounced. With respect to climate change we highlight the importance of fire prevention in the area.
Sven Boese, Martin Jung, Nuno Carvalhais, Adriaan J. Teuling, and Markus Reichstein
Biogeosciences, 16, 2557–2572, https://doi.org/10.5194/bg-16-2557-2019, https://doi.org/10.5194/bg-16-2557-2019, 2019
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This study examines how limited water availability during droughts affects water-use efficiency. This metric describes how much carbon an ecosystem can assimilate for each unit of water lost by transpiration. We test how well different water-use efficiency models can capture the dynamics of transpiration decrease due to increased soil-water limitation. Accounting for the interacting effects of radiation and water limitation is necessary to accurately predict transpiration during these periods.
Raia Silvia Massad, Juliette Lathière, Susanna Strada, Mathieu Perrin, Erwan Personne, Marc Stéfanon, Patrick Stella, Sophie Szopa, and Nathalie de Noblet-Ducoudré
Biogeosciences, 16, 2369–2408, https://doi.org/10.5194/bg-16-2369-2019, https://doi.org/10.5194/bg-16-2369-2019, 2019
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Human activities strongly interfere in the land–atmosphere interactions through changes in land use and land cover changes and land management. The objectives of this review are to synthesize the existing experimental and modelling works that investigate physical, chemical, and biogeochemical interactions between land surface and the atmosphere. Greater consideration of atmospheric chemistry, through land–atmosphere interactions, as a decision parameter for land management is essential.
Yuzo Miyazaki, Divyavani Gowda, Eri Tachibana, Yoshiyuki Takahashi, and Tsutom Hiura
Biogeosciences, 16, 2181–2188, https://doi.org/10.5194/bg-16-2181-2019, https://doi.org/10.5194/bg-16-2181-2019, 2019
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Fatty alcohols (FAs) are major components of surface lipids and can act as surface-active atmospheric organic aerosols, influencing the cloud formation. We identified five secondary FAs in atmospheric aerosols at two temperate forest sites and revealed their distinct seasonal variation for the first time. Our results suggest that they originated mostly from plant wax and could be used as useful tracers for primary biological aerosol particles.
Claire Delon, Corinne Galy-Lacaux, Dominique Serça, Erwan Personne, Eric Mougin, Marcellin Adon, Valérie Le Dantec, Benjamin Loubet, Rasmus Fensholt, and Torbern Tagesson
Biogeosciences, 16, 2049–2077, https://doi.org/10.5194/bg-16-2049-2019, https://doi.org/10.5194/bg-16-2049-2019, 2019
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In the Sahel region during the wet season, CO2 and NO are released to the atmosphere, and NH3 is deposited on the soil. During the dry season, processes are strongly reduced. This paper shows the temporal variation in these soil–atmosphere exchanges of trace gases for 2 years, their sharp increase when the first rains fall onto dry soils, and how microbial processes are involved. We use a modelling approach, which is necessary when continuous measurements are not possible in remote regions.
Anne Sofie Lansø, Thomas Luke Smallman, Jesper Heile Christensen, Mathew Williams, Kim Pilegaard, Lise-Lotte Sørensen, and Camilla Geels
Biogeosciences, 16, 1505–1524, https://doi.org/10.5194/bg-16-1505-2019, https://doi.org/10.5194/bg-16-1505-2019, 2019
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Although coastal regions only amount to 7 % of the global oceans, their contribution to the global oceanic surface exchange of CO2 is much greater. In this study, we gain detailed insight into how these coastal marine fluxes compare to CO2 exchange from coastal land regions. Annually, the coastal marine exchanges are smaller than the total uptake of CO2 from the land surfaces within the study area but comparable in size to terrestrial fluxes from individual land cover classes of the region.
Ravshan Eshonkulov, Arne Poyda, Joachim Ingwersen, Hans-Dieter Wizemann, Tobias K. D. Weber, Pascal Kremer, Petra Högy, Alim Pulatov, and Thilo Streck
Biogeosciences, 16, 521–540, https://doi.org/10.5194/bg-16-521-2019, https://doi.org/10.5194/bg-16-521-2019, 2019
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We compared the energy balance closure (EBC) under varying environmental conditions and investigated a wide range of possible reasons for the energy imbalance. As measures for the imbalance, we used ordinary linear regression, the energy balance ratio (EBR), and the energy residual. The EBR was also investigated as a function of buoyancy, friction velocity, and atmospheric stability. Moreover, the relationship between the EBC and flux source area or footprint was also investigated.
Juha-Pekka Tuovinen, Mika Aurela, Juha Hatakka, Aleksi Räsänen, Tarmo Virtanen, Juha Mikola, Viktor Ivakhov, Vladimir Kondratyev, and Tuomas Laurila
Biogeosciences, 16, 255–274, https://doi.org/10.5194/bg-16-255-2019, https://doi.org/10.5194/bg-16-255-2019, 2019
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We analysed ecosystem-scale measurements of methane exchange between Arctic tundra and the atmosphere, taking into account the large variations in vegetation and soil properties. The measurements are spatial averages, but using meteorological and statistical modelling techniques we could estimate methane emissions for different land cover types and quantify how well the measurements correspond to the spatial variability. This provides a more accurate estimate of the regional methane emission.
Benjamin Gaubert, Britton B. Stephens, Sourish Basu, Frédéric Chevallier, Feng Deng, Eric A. Kort, Prabir K. Patra, Wouter Peters, Christian Rödenbeck, Tazu Saeki, David Schimel, Ingrid Van der Laan-Luijkx, Steven Wofsy, and Yi Yin
Biogeosciences, 16, 117–134, https://doi.org/10.5194/bg-16-117-2019, https://doi.org/10.5194/bg-16-117-2019, 2019
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We have compared global carbon budgets calculated from numerical inverse models and CO2 observations, and evaluated how these systems reproduce vertical gradients in atmospheric CO2 from aircraft measurements. We found that available models have converged on near-neutral tropical total fluxes for several decades, implying consistent sinks in intact tropical forests, and that assumed fossil fuel emissions and predicted atmospheric growth rates are now the dominant axes of disagreement.
Archana Dayalu, J. William Munger, Steven C. Wofsy, Yuxuan Wang, Thomas Nehrkorn, Yu Zhao, Michael B. McElroy, Chris P. Nielsen, and Kristina Luus
Biogeosciences, 15, 6713–6729, https://doi.org/10.5194/bg-15-6713-2018, https://doi.org/10.5194/bg-15-6713-2018, 2018
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Accounting for the vegetation signal is critical for comprehensive CO2 budget assessment in China. We model and evaluate hourly vegetation carbon dioxide (CO2) exchange (mass per unit area per unit time) in northern China from 2005 to 2009. The model is driven by satellite and meteorological data, is linked to ground-level ecosystem observations, and is applicable to other time periods. We find vegetation uptake of CO2 in summer is comparable to emissions from fossil fuels in northern China.
Sophia Walther, Luis Guanter, Birgit Heim, Martin Jung, Gregory Duveiller, Aleksandra Wolanin, and Torsten Sachs
Biogeosciences, 15, 6221–6256, https://doi.org/10.5194/bg-15-6221-2018, https://doi.org/10.5194/bg-15-6221-2018, 2018
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We explored the timing of the peak of the short annual growing season in tundra ecosystems as indicated by an extensive suite of satellite indicators of vegetation productivity. Delayed peak greenness compared to peak photosynthesis is consistently found across years and land-cover classes. Plants also experience growth after optimal conditions for assimilation regarding light and temperature have passed. Our results have implications for the modelling of the circumpolar carbon balance.
Stefano Manzoni, Petr Čapek, Philipp Porada, Martin Thurner, Mattias Winterdahl, Christian Beer, Volker Brüchert, Jan Frouz, Anke M. Herrmann, Björn D. Lindahl, Steve W. Lyon, Hana Šantrůčková, Giulia Vico, and Danielle Way
Biogeosciences, 15, 5929–5949, https://doi.org/10.5194/bg-15-5929-2018, https://doi.org/10.5194/bg-15-5929-2018, 2018
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Carbon fixed by plants and phytoplankton through photosynthesis is ultimately stored in soils and sediments or released to the atmosphere during decomposition of dead biomass. Carbon-use efficiency is a useful metric to quantify the fate of carbon – higher efficiency means higher storage and lower release to the atmosphere. Here we summarize many definitions of carbon-use efficiency and study how this metric changes from organisms to ecosystems and from terrestrial to aquatic environments.
Gerardo Fratini, Simone Sabbatini, Kevin Ediger, Brad Riensche, George Burba, Giacomo Nicolini, Domenico Vitale, and Dario Papale
Biogeosciences, 15, 5473–5487, https://doi.org/10.5194/bg-15-5473-2018, https://doi.org/10.5194/bg-15-5473-2018, 2018
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Using a simulation study and field data, we quantify the biases that can be introduced in fluxes measured by eddy covariance (EC) if the raw high-frequency data are affected by random and systematic timing misalignments. Our study was motivated by the increasingly widespread adoption of fully digital EC systems potentially subject to such timing errors. We found biases as large as 10 %. We further propose a test to evaluate EC data logging systems for their time synchronization capabilities.
Jason A. Ducker, Christopher D. Holmes, Trevor F. Keenan, Silvano Fares, Allen H. Goldstein, Ivan Mammarella, J. William Munger, and Jordan Schnell
Biogeosciences, 15, 5395–5413, https://doi.org/10.5194/bg-15-5395-2018, https://doi.org/10.5194/bg-15-5395-2018, 2018
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We have developed an accurate method (SynFlux) to estimate ozone deposition and stomatal uptake across 103 flux tower sites (43 US, 60 Europe), where ozone concentrations and fluxes have not been measured. In all, the SynFlux public dataset provides monthly values of ozone dry deposition for 926 site years across a wide array of ecosystems. The SynFlux dataset will promote further applications to ecosystem, air quality, or climate modeling across the geoscience community.
Carmen Emmel, Annina Winkler, Lukas Hörtnagl, Andrew Revill, Christof Ammann, Petra D'Odorico, Nina Buchmann, and Werner Eugster
Biogeosciences, 15, 5377–5393, https://doi.org/10.5194/bg-15-5377-2018, https://doi.org/10.5194/bg-15-5377-2018, 2018
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It is of great interest to know whether croplands act as a net source or sink of atmospheric CO2 and if soil carbon (C) stocks are preserved over long timescales due to the role of C in soil fertility. For a cropland in Switzerland it was found that managing the field under the Swiss framework of the Proof of Ecological Performance (PEP) resulted in soil C losses of 18.0 %. Additional efforts are needed to bring Swiss management practices closer to the goal of preserving soil C in the long term.
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