Articles | Volume 12, issue 6
https://doi.org/10.5194/bg-12-1865-2015
© Author(s) 2015. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
https://doi.org/10.5194/bg-12-1865-2015
© Author(s) 2015. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
Research article
| 
20 Mar 2015
Research article |
| 20 Mar 2015
Multi-isotope labelling of organic matter by diffusion of 2H/18O-H2O vapour and 13C-CO2 into the leaves and its distribution within the plant
M. S. Studer
Department of Geography, University of Zurich, Winterthurerstr. 190, 8057 Zurich, Switzerland
Laboratory of Atmospheric Chemistry, Paul Scherrer Institute, 5232 Villigen PSI, Switzerland
R. T. W. Siegwolf
Laboratory of Atmospheric Chemistry, Paul Scherrer Institute, 5232 Villigen PSI, Switzerland
M. Leuenberger
Climate and Environmental Physics, Physics Institute and Oeschger Centre for Climate Change Research, University of Bern, Sidlerstr. 5, 3012 Bern, Switzerland
Department of Geography, University of Zurich, Winterthurerstr. 190, 8057 Zurich, Switzerland
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Amicie A. Delahaie, Lauric Cécillon, Marija Stojanova, Samuel Abiven, Pierre Arbelet, Dominique Arrouays, François Baudin, Antonio Bispo, Line Boulonne, Claire Chenu, Jussi Heinonsalo, Claudy Jolivet, Kristiina Karhu, Manuel Martin, Lorenza Pacini, Christopher Poeplau, Céline Ratié, Pierre Roudier, Nicolas P. A. Saby, Florence Savignac, and Pierre Barré
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Greenhouse gases emissions are contributing to global warming and it is essential to better understand where they originate from and how they are transported. In this study we analyze greenhouse gas observations at a Swiss tall tower where measurements are taken more than 200 m above ground and investigate their origin by looking at the condition of the atmosphere at the time of the observations. We find that most pollution at this site is caused from emissions transported from further away.
Haoyu Diao, Philipp Schuler, Gregory R. Goldsmith, Rolf T. W. Siegwolf, Matthias Saurer, and Marco M. Lehmann
Hydrol. Earth Syst. Sci., 26, 5835–5847, https://doi.org/10.5194/hess-26-5835-2022, https://doi.org/10.5194/hess-26-5835-2022, 2022
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Ece Satar, Peter Nyfeler, Bernhard Bereiter, Céline Pascale, Bernhard Niederhauser, and Markus Leuenberger
Atmos. Meas. Tech., 13, 101–117, https://doi.org/10.5194/amt-13-101-2020, https://doi.org/10.5194/amt-13-101-2020, 2020
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Good-quality measurements of atmospheric trace gases are only possible with regular calibrations and stable measurements from the standard cylinders. This study investigates instabilities due to surface effects on newly built aluminum and steel cylinders. We present measurements over a set of temperature and pressure ranges for the amount fractions of CO2, CO, CH4 and H2O using a commercial and a novel laser spectroscopic analyzer.
Tesfaye A. Berhanu, John Hoffnagle, Chris Rella, David Kimhak, Peter Nyfeler, and Markus Leuenberger
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Accurate measurement of variations in atmospheric O2 can provide useful information about atmospheric, biospheric, and oceanic processes, which is a challenge for existing measurement techniques. Here, we introduce a newly built high-precision, stable CRDS analyzer (Picarro G2207) that can measure O2 mixing ratios with a short-term precision of < 1 ppm and only requires calibration every 12 h. Measurements from tower and mountain sites are also presented.
Michael Döring and Markus Christian Leuenberger
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We analyse Holocen temperatures reconstructed from gas-stable-isotope species measured on ancient air extracted from a Greenland ice core. Also, we compare two state of the art firn-models which are needed for the inversion of the gas-isotope data to paleo-temperature and provide detailed uncertainty estimations for the reconstructed temperature estimates. Finally, we compare our reconstructed temperatures to two recent reconstructions based on the same gas-isotope data as used here.
Olga V. Churakova (Sidorova), Marina V. Fonti, Matthias Saurer, Sébastien Guillet, Christophe Corona, Patrick Fonti, Vladimir S. Myglan, Alexander V. Kirdyanov, Oksana V. Naumova, Dmitriy V. Ovchinnikov, Alexander V. Shashkin, Irina P. Panyushkina, Ulf Büntgen, Malcolm K. Hughes, Eugene A. Vaganov, Rolf T. W. Siegwolf, and Markus Stoffel
Clim. Past, 15, 685–700, https://doi.org/10.5194/cp-15-685-2019, https://doi.org/10.5194/cp-15-685-2019, 2019
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We present a unique dataset of multiple tree-ring and stable isotope parameters, representing temperature-sensitive Siberian ecotones, to assess climatic impacts after six large stratospheric volcanic eruptions at 535, 540, 1257, 1640, 1815, and 1991 CE. Besides the well-documented effects of temperature derived from tree-ring width and latewood density, stable carbon and oxygen isotopes in tree-ring cellulose provide information about moisture and sunshine duration changes after the events.
Scott T. Allen, James W. Kirchner, Sabine Braun, Rolf T. W. Siegwolf, and Gregory R. Goldsmith
Hydrol. Earth Syst. Sci., 23, 1199–1210, https://doi.org/10.5194/hess-23-1199-2019, https://doi.org/10.5194/hess-23-1199-2019, 2019
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We used stable isotopes of xylem water to study differences in the seasonal origin of water in more than 900 individual trees from three dominant species in 182 Swiss forested sites. We discovered that midsummer transpiration was mostly supplied by winter precipitation across diverse humid climates. Our findings provide new insights into tree vulnerability to droughts, transport of water (and thus solutes) in soils, and the climatic information conveyed by plant-tissue isotopes.
Daniele Penna, Luisa Hopp, Francesca Scandellari, Scott T. Allen, Paolo Benettin, Matthias Beyer, Josie Geris, Julian Klaus, John D. Marshall, Luitgard Schwendenmann, Till H. M. Volkmann, Jana von Freyberg, Anam Amin, Natalie Ceperley, Michael Engel, Jay Frentress, Yamuna Giambastiani, Jeff J. McDonnell, Giulia Zuecco, Pilar Llorens, Rolf T. W. Siegwolf, Todd E. Dawson, and James W. Kirchner
Biogeosciences, 15, 6399–6415, https://doi.org/10.5194/bg-15-6399-2018, https://doi.org/10.5194/bg-15-6399-2018, 2018
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Understanding how water flows through ecosystems is needed to provide society and policymakers with the scientific background to manage water resources sustainably. Stable isotopes of hydrogen and oxygen in water are a powerful tool for tracking water fluxes, although the heterogeneity of natural systems and practical methodological issues still limit their full application. Here, we examine the challenges in this research field and highlight new perspectives based on interdisciplinary research.
Natalie Orlowski, Lutz Breuer, Nicolas Angeli, Pascal Boeckx, Christophe Brumbt, Craig S. Cook, Maren Dubbert, Jens Dyckmans, Barbora Gallagher, Benjamin Gralher, Barbara Herbstritt, Pedro Hervé-Fernández, Christophe Hissler, Paul Koeniger, Arnaud Legout, Chandelle Joan Macdonald, Carlos Oyarzún, Regine Redelstein, Christof Seidler, Rolf Siegwolf, Christine Stumpp, Simon Thomsen, Markus Weiler, Christiane Werner, and Jeffrey J. McDonnell
Hydrol. Earth Syst. Sci., 22, 3619–3637, https://doi.org/10.5194/hess-22-3619-2018, https://doi.org/10.5194/hess-22-3619-2018, 2018
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To extract water from soils for isotopic analysis, cryogenic water extraction is the most widely used removal technique. This work presents results from a worldwide laboratory intercomparison test of cryogenic extraction systems. Our results showed large differences in retrieved isotopic signatures among participating laboratories linked to interactions between soil type and properties, system setup, extraction efficiency, extraction system leaks, and each lab’s internal accuracy.
Michael Döring and Markus C. Leuenberger
Clim. Past, 14, 763–788, https://doi.org/10.5194/cp-14-763-2018, https://doi.org/10.5194/cp-14-763-2018, 2018
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We present a novel approach for ice-core-based temperature reconstructions, which is based on gas-isotope data measured on enclosed air bubbles in ice cores. The processes of air movement and enclosure are highly temperature dependent due to heat diffusion in and densification of the snow and ice. Our method inverts a model, which describes these processes, to desired temperature histories. This paper examines the performance of our novel approach on different synthetic isotope-data scenarios.
Ye Yuan, Ludwig Ries, Hannes Petermeier, Martin Steinbacher, Angel J. Gómez-Peláez, Markus C. Leuenberger, Marcus Schumacher, Thomas Trickl, Cedric Couret, Frank Meinhardt, and Annette Menzel
Atmos. Meas. Tech., 11, 1501–1514, https://doi.org/10.5194/amt-11-1501-2018, https://doi.org/10.5194/amt-11-1501-2018, 2018
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This paper presents a novel statistical method, ADVS, for baseline selection of representative CO2 data at elevated mountain measurement stations. It provides insights on how data processing techniques are critical for measurements and data analyses. Compared with other statistical methods, our method appears to be a good option as a generalized approach with improved comparability, which is important for research on measurement site characteristics and comparisons between stations.
Malin M. Ziehmer, Kurt Nicolussi, Christian Schlüchter, and Markus Leuenberger
Biogeosciences, 15, 1047–1064, https://doi.org/10.5194/bg-15-1047-2018, https://doi.org/10.5194/bg-15-1047-2018, 2018
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Cellulose content (CC (%)) series from two high-Alpine species, Larix decidua Mill. (European larch, LADE) and Pinus cembra L. (Swiss stone pine, PICE) are investigated in modern wood samples and Holocene wood remains from the Early and mid-Holocene. Trends in modern and Holocene time series as well as climate–cellulose relationships for modern trees in the Alps show high potential for CC (%) to be established as novel supplementary proxy in dendroclimatology.
Tesfaye A. Berhanu, Sönke Szidat, Dominik Brunner, Ece Satar, Rüdiger Schanda, Peter Nyfeler, Michael Battaglia, Martin Steinbacher, Samuel Hammer, and Markus Leuenberger
Atmos. Chem. Phys., 17, 10753–10766, https://doi.org/10.5194/acp-17-10753-2017, https://doi.org/10.5194/acp-17-10753-2017, 2017
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Fossil fuel CO2 is the major contributor of anthropogenic CO2 in the atmosphere, and accurate quantification is essential to better understand the carbon cycle. Such accurate quantification can be conducted based on radiocarbon measurements. In this study, we present radiocarbon measurements from a tall tower site in Switzerland. From these measurements, we have observed seasonally varying fossil fuel CO2 contributions and a biospheric CO2 component that varies diurnally and seasonally.
Kathrin M. Keller, Sebastian Lienert, Anil Bozbiyik, Thomas F. Stocker, Olga V. Churakova (Sidorova), David C. Frank, Stefan Klesse, Charles D. Koven, Markus Leuenberger, William J. Riley, Matthias Saurer, Rolf Siegwolf, Rosemarie B. Weigt, and Fortunat Joos
Biogeosciences, 14, 2641–2673, https://doi.org/10.5194/bg-14-2641-2017, https://doi.org/10.5194/bg-14-2641-2017, 2017
Arndt Piayda, Maren Dubbert, Rolf Siegwolf, Matthias Cuntz, and Christiane Werner
Biogeosciences, 14, 2293–2306, https://doi.org/10.5194/bg-14-2293-2017, https://doi.org/10.5194/bg-14-2293-2017, 2017
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Complex plant–soil interactions in the hydrological cycle of a Mediterranean cork oak ecosystem are investigated with stable water isotopes. Trees largely foster infiltration due to altered microclimatic conditions below crowns but compete with understorey plants for the same water source in deeper soil layers. The presence of understorey plants does not alter water losses compared to bare soil, but water utilization for carbon sequestration and nitrogen fixation is largely increased.
Michael F. Schibig, Emmanuel Mahieu, Stephan Henne, Bernard Lejeune, and Markus C. Leuenberger
Atmos. Chem. Phys., 16, 9935–9949, https://doi.org/10.5194/acp-16-9935-2016, https://doi.org/10.5194/acp-16-9935-2016, 2016
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Two CO2 time series measured at the High Alpine Research Station Jungfraujoch, Switzerland (3580 m a.s.l.), in the period from 2005 to 2013 were compared. One data set was measured in situ whereas the other data set was measured in the column above Jungfraujoch. The trends of the column integrated and the in situ data set are in good agreement, the amplitude of the in situ data set is ca. two times the amplitude of the column integrated data set, because it is closer to the sources and sinks.
Tesfaye Ayalneh Berhanu, Ece Satar, Rudiger Schanda, Peter Nyfeler, Hanspeter Moret, Dominik Brunner, Brian Oney, and Markus Leuenberger
Atmos. Meas. Tech., 9, 2603–2614, https://doi.org/10.5194/amt-9-2603-2016, https://doi.org/10.5194/amt-9-2603-2016, 2016
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In this manuscript, we have presented Co, CO2 and CH4 measurement data from an old radio tower tower (217.5 m) at Beromunster, Switzerland. From about 2 years of continuous CO, CO2 and CH4 measurement at five different heights, we have determined a long-term reproducibility of 2.79 ppb, 0.05 ppm and 0.29 ppb for CO, CO2 and CH4, respectively, compliant with the GAW requirements. We have also observed seasonal and diurnal variation of these species.
Ece Satar, Tesfaye A. Berhanu, Dominik Brunner, Stephan Henne, and Markus Leuenberger
Biogeosciences, 13, 2623–2635, https://doi.org/10.5194/bg-13-2623-2016, https://doi.org/10.5194/bg-13-2623-2016, 2016
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Beromünster tall tower is the flagship of the densely placed Swiss greenhouse gas observation network (CarboCount CH). In this research article we report the first 2 years of the continuous greenhouse gas measurements using cavity ring down spectroscopy analyzer from this tall tower. We have adopted a purely observation based, multi-species and multi-level approach to characterize the site with respect to sources and sinks of natural and anthropogenic origin at diurnal to annual timescales.
Lucie Bazin, Amaelle Landais, Emilie Capron, Valérie Masson-Delmotte, Catherine Ritz, Ghislain Picard, Jean Jouzel, Marie Dumont, Markus Leuenberger, and Frédéric Prié
Clim. Past, 12, 729–748, https://doi.org/10.5194/cp-12-729-2016, https://doi.org/10.5194/cp-12-729-2016, 2016
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We present new measurements of δO2⁄N2 and δ18Oatm performed on well-conserved ice from EDC covering MIS5 and between 380 and 800 ka. The combination of the observation of a 100 ka periodicity in the new δO2⁄N2 record with a MIS5 multi-site multi-proxy study has revealed a potential influence of local climatic parameters on δO2⁄N2. Moreover, we propose that the varying delay between d18Oatm and precession for the last 800 ka is affected by the occurrence of ice sheet discharge events.
Stephan Henne, Dominik Brunner, Brian Oney, Markus Leuenberger, Werner Eugster, Ines Bamberger, Frank Meinhardt, Martin Steinbacher, and Lukas Emmenegger
Atmos. Chem. Phys., 16, 3683–3710, https://doi.org/10.5194/acp-16-3683-2016, https://doi.org/10.5194/acp-16-3683-2016, 2016
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Greenhouse gas emissions can be assessed by "top-down" methods that combine atmospheric observations, a transport model and a mathematical optimisation framework. Here, we apply such a top-down method to the methane emissions of Switzerland, utilising observations from the recently installed CarboCount-CH network. Our Swiss total emissions largely agree with those of the national "bottom-up" inventory, whereas regional differences suggest lower than reported emissions from manure handling.
M. C. Leuenberger, M. F. Schibig, and P. Nyfeler
Atmos. Meas. Tech., 8, 5289–5299, https://doi.org/10.5194/amt-8-5289-2015, https://doi.org/10.5194/amt-8-5289-2015, 2015
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Adsorption/desorption effects of trace gases in gas cylinders were investigated. Our measurements indicate a rather strong effect on steel cylinders for CO2 that becomes easily visible through enhanced concentrations for low (<20 bars) gas pressure. Much smaller effects are observed for CO and CH4. Significantly smaller effects are measured for all gas species investigated on aluminium cylinders. Careful selection of gas cylinders for high-precision calibration purposes is recommended.
T. Kobashi, T. Ikeda-Fukazawa, M. Suwa, J. Schwander, T. Kameda, J. Lundin, A. Hori, H. Motoyama, M. Döring, and M. Leuenberger
Atmos. Chem. Phys., 15, 13895–13914, https://doi.org/10.5194/acp-15-13895-2015, https://doi.org/10.5194/acp-15-13895-2015, 2015
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We find that argon/nitrogen ratios of trapped air in the GISP2 ice core on “gas ages” are significantly negatively correlated with accumulation rate changes over the past 6000 years. Lines of evidence indicate that changes in overloading pressure at bubble closeoff depths induced the gas fractionation in closed bubbles. Further understanding of the fractionation processes may lead to a new proxy for the past temperature and accumulation rate.
B. Oney, S. Henne, N. Gruber, M. Leuenberger, I. Bamberger, W. Eugster, and D. Brunner
Atmos. Chem. Phys., 15, 11147–11164, https://doi.org/10.5194/acp-15-11147-2015, https://doi.org/10.5194/acp-15-11147-2015, 2015
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We present a detailed analysis of a new greenhouse gas measurement network
in the Swiss Plateau, situated between the Jura mountains and the Alps. We
find the network's measurements to be information rich and suitable
for studying surface carbon fluxes of the study region. However, we are
limited by the high-resolution (2km) atmospheric transport model's ability
to simulate meteorology at the individual measurement stations, especially
at those situated in rough terrain.
M. F. Schibig, M. Steinbacher, B. Buchmann, I. T. van der Laan-Luijkx, S. van der Laan, S. Ranjan, and M. C. Leuenberger
Atmos. Meas. Tech., 8, 57–68, https://doi.org/10.5194/amt-8-57-2015, https://doi.org/10.5194/amt-8-57-2015, 2015
B. Maestrini, S. Abiven, N. Singh, J. Bird, M. S. Torn, and M. W. I. Schmidt
Biogeosciences, 11, 5199–5213, https://doi.org/10.5194/bg-11-5199-2014, https://doi.org/10.5194/bg-11-5199-2014, 2014
M. C. Leuenberger, M. F. Schibig, and P. Nyfeler
Atmos. Chem. Phys. Discuss., https://doi.org/10.5194/acpd-14-19293-2014, https://doi.org/10.5194/acpd-14-19293-2014, 2014
Revised manuscript not accepted
S. Affolter, D. Fleitmann, and M. Leuenberger
Clim. Past, 10, 1291–1304, https://doi.org/10.5194/cp-10-1291-2014, https://doi.org/10.5194/cp-10-1291-2014, 2014
I. Mariani, A. Eichler, T. M. Jenk, S. Brönnimann, R. Auchmann, M. C. Leuenberger, and M. Schwikowski
Clim. Past, 10, 1093–1108, https://doi.org/10.5194/cp-10-1093-2014, https://doi.org/10.5194/cp-10-1093-2014, 2014
P. Kindler, M. Guillevic, M. Baumgartner, J. Schwander, A. Landais, and M. Leuenberger
Clim. Past, 10, 887–902, https://doi.org/10.5194/cp-10-887-2014, https://doi.org/10.5194/cp-10-887-2014, 2014
M. Baumgartner, P. Kindler, O. Eicher, G. Floch, A. Schilt, J. Schwander, R. Spahni, E. Capron, J. Chappellaz, M. Leuenberger, H. Fischer, and T. F. Stocker
Clim. Past, 10, 903–920, https://doi.org/10.5194/cp-10-903-2014, https://doi.org/10.5194/cp-10-903-2014, 2014
M. S. Studer, R. T. W. Siegwolf, and S. Abiven
Biogeosciences, 11, 1637–1648, https://doi.org/10.5194/bg-11-1637-2014, https://doi.org/10.5194/bg-11-1637-2014, 2014
Z. Kern, B. Kohán, and M. Leuenberger
Atmos. Chem. Phys., 14, 1897–1907, https://doi.org/10.5194/acp-14-1897-2014, https://doi.org/10.5194/acp-14-1897-2014, 2014
L. Bazin, A. Landais, B. Lemieux-Dudon, H. Toyé Mahamadou Kele, D. Veres, F. Parrenin, P. Martinerie, C. Ritz, E. Capron, V. Lipenkov, M.-F. Loutre, D. Raynaud, B. Vinther, A. Svensson, S. O. Rasmussen, M. Severi, T. Blunier, M. Leuenberger, H. Fischer, V. Masson-Delmotte, J. Chappellaz, and E. Wolff
Clim. Past, 9, 1715–1731, https://doi.org/10.5194/cp-9-1715-2013, https://doi.org/10.5194/cp-9-1715-2013, 2013
I. T. van der Laan-Luijkx, S. van der Laan, C. Uglietti, M. F. Schibig, R. E. M. Neubert, H. A. J. Meijer, W. A. Brand, A. Jordan, J. M. Richter, M. Rothe, and M. C. Leuenberger
Atmos. Meas. Tech., 6, 1805–1815, https://doi.org/10.5194/amt-6-1805-2013, https://doi.org/10.5194/amt-6-1805-2013, 2013
M. Guillevic, L. Bazin, A. Landais, P. Kindler, A. Orsi, V. Masson-Delmotte, T. Blunier, S. L. Buchardt, E. Capron, M. Leuenberger, P. Martinerie, F. Prié, and B. M. Vinther
Clim. Past, 9, 1029–1051, https://doi.org/10.5194/cp-9-1029-2013, https://doi.org/10.5194/cp-9-1029-2013, 2013
E. Capron, A. Landais, D. Buiron, A. Cauquoin, J. Chappellaz, M. Debret, J. Jouzel, M. Leuenberger, P. Martinerie, V. Masson-Delmotte, R. Mulvaney, F. Parrenin, and F. Prié
Clim. Past, 9, 983–999, https://doi.org/10.5194/cp-9-983-2013, https://doi.org/10.5194/cp-9-983-2013, 2013
Related subject area
Biogeochemistry: Stable Isotopes & Other Tracers
Sea ice and mixed layer depth influence on nitrate depletion and associated isotopic effects in the Drake Passage–Weddell Sea region, Southern Ocean
Stable iron isotope signals indicate a “pseudo-abiotic” process driving deep iron release in methanic sediments
Triple oxygen isotope evidence for the pathway of nitrous oxide production in a forested soil with increased emission on rainy days
Previous integrated or organic farming affects productivity and ecosystem N balance rather than fertilizer 15N allocation to plants and soil, leaching, or gaseous emissions (NH3, N2O, and N2)
How long does carbon stay in a near-pristine central Amazon forest? An empirical estimate with radiocarbon
No increase is detected and modeled for the seasonal cycle amplitude of δ13C of atmospheric carbon dioxide
Fungi present distinguishable isotopic signals when grown on glycolytic versus tricarboxylic acid cycle intermediates
Bias in calculating gross nitrification rates in forested catchments using the triple oxygen isotopic composition (Δ17O) of stream nitrate
Position-specific kinetic isotope effects for nitrous oxide: a new expansion of the Rayleigh model
Technical note: A Bayesian mixing model to unravel isotopic data and quantify trace gas production and consumption pathways for time series data – Time-resolved FRactionation And Mixing Evaluation (TimeFRAME)
Separating above-canopy CO2 and O2 measurements into their atmospheric and biospheric signatures
Climatic controls on leaf wax hydrogen isotope ratios in terrestrial and marine sediments along a hyperarid-to-humid gradient
Fractionation of stable carbon isotopes during microbial propionate consumption in anoxic rice paddy soils
Sources and sinks of carbonyl sulfide inferred from tower and mobile atmospheric observations in the Netherlands
Downpour dynamics: outsized impacts of storm events on unprocessed atmospheric nitrate export in an urban watershed
The hidden role of dissolved organic carbon in the biogeochemical cycle of carbon in modern redox-stratified lakes
Biogeochemical processes captured by carbon isotopes in redox-stratified water columns: a comparative study of four modern stratified lakes along an alkalinity gradient
Partitioning of carbon export in the euphotic zone of the oligotrophic South China Sea
Determination of respiration and photosynthesis fractionation factors for atmospheric dioxygen inferred from a vegetation–soil–atmosphere analogue of the terrestrial biosphere in closed chambers
Permafrost degradation and nitrogen cycling in Arctic rivers: insights from stable nitrogen isotope studies
Neodymium budget in the Mediterranean Sea: evaluating the role of atmospheric dusts using a high-resolution dynamical-biogeochemical model
Nitrate isotope investigations reveal future impacts of climate change on nitrogen inputs and cycling in Arctic fjords: Kongsfjorden and Rijpfjorden (Svalbard)
Mineralization of autochthonous particulate organic carbon is a fast channel of organic matter turnover in Germany's largest drinking water reservoir
Carbon isotopic ratios of modern C3 and C4 vegetation on the Indian peninsula and changes along the plant–soil–river continuum – implications for vegetation reconstructions
Controls on nitrite oxidation in the upper Southern Ocean: insights from winter kinetics experiments in the Indian sector
Tracing the source of nitrate in a forested stream showing elevated concentrations during storm events
Intra-skeletal variability in phosphate oxygen isotope composition reveals regional heterothermies in marine vertebrates
Isotopic differences in soil–plant–atmosphere continuum composition and control factors of different vegetation zones on the northern slope of the Qilian Mountains
An analysis of the variability in δ13C in macroalgae from the Gulf of California: indicative of carbon concentration mechanisms and isotope discrimination during carbon assimilation
Summertime productivity and carbon export potential in the Weddell Sea, with a focus on the waters adjacent to Larsen C Ice Shelf
Particulate biogenic barium tracer of mesopelagic carbon remineralization in the Mediterranean Sea (PEACETIME project)
Hydrogen and carbon isotope fractionation factors of aerobic methane oxidation in deep-sea water
Host-influenced geochemical signature in the parasitic foraminifera Hyrrokkin sarcophaga
Comparing modified substrate-induced respiration with selective inhibition (SIRIN) and N2O isotope approaches to estimate fungal contribution to denitrification in three arable soils under anoxic conditions
How are oxygen budgets influenced by dissolved iron and growth of oxygenic phototrophs in an iron-rich spring system? Initial results from the Espan Spring in Fürth, Germany
Stable isotope ratios in seawater nitrate reflect the influence of Pacific water along the northwest Atlantic margin
High-resolution 14C bomb peak dating and climate response analyses of subseasonal stable isotope signals in wood of the African baobab – a case study from Oman
Geographic variability in freshwater methane hydrogen isotope ratios and its implications for global isotopic source signatures
Seasonality of nitrogen sources, cycling, and loading in a New England river discerned from nitrate isotope ratios
Evaluating the response of δ13C in Haloxylon ammodendron, a dominant C4 species in Asian desert ecosystems, to water and nitrogen addition as well as the availability of its δ13C as an indicator of water use efficiency
Modern silicon dynamics of a small high-latitude subarctic lake
Radium-228-derived ocean mixing and trace element inputs in the South Atlantic
Nitrogen isotopic fractionations during nitric oxide production in an agricultural soil
Silicon uptake and isotope fractionation dynamics by crop species
Barium stable isotopes as a fingerprint of biological cycling in the Amazon River basin
Bottomland hardwood forest growth and stress response to hydroclimatic variation: evidence from dendrochronology and tree ring Δ13C values
N2O isotope approaches for source partitioning of N2O production and estimation of N2O reduction – validation with the 15N gas-flux method in laboratory and field studies
Technical note: Single-shell δ11B analysis of Cibicidoides wuellerstorfi using femtosecond laser ablation MC-ICPMS and secondary ion mass spectrometry
Biogeochemical evidence of anaerobic methane oxidation and anaerobic ammonium oxidation in a stratified lake using stable isotopes
Effects of 238U variability and physical transport on water column 234Th downward fluxes in the coastal upwelling system off Peru
Aymeric P. M. Servettaz, Yuta Isaji, Chisato Yoshikawa, Yanghee Jang, Boo-Keun Khim, Yeongjun Ryu, Daniel M. Sigman, Nanako O. Ogawa, Francisco J. Jiménez-Espejo, and Naohiko Ohkouchi
Biogeosciences, 22, 2239–2260, https://doi.org/10.5194/bg-22-2239-2025, https://doi.org/10.5194/bg-22-2239-2025, 2025
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Phytoplankton blooms occur after sea ice retreats in the Southern Ocean. In this study we investigate the influence of seasonal cycle of sea ice concentration on nitrate depletion, testing the hypothesis that meltwater release stabilizes the water column and favors nutrient utilization. We find that, at a regional scale, nitrate depletion and vertical mixing are weakly correlated with sea ice cycle. Nitrate depletion is rather linked to other oceanographic processes controlling mixing depth.
Susann Henkel, Bo Liu, Michael Staubwasser, Simone A. Kasemann, Anette Meixner, David A. Aromokeye, Michael W. Friedrich, and Sabine Kasten
Biogeosciences, 22, 1673–1696, https://doi.org/10.5194/bg-22-1673-2025, https://doi.org/10.5194/bg-22-1673-2025, 2025
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We intend to unravel iron (Fe) reduction pathways in high-deposition methanic sediments because pools of Fe minerals could stimulate methane oxidation and also generation. Our data from the North Sea show that Fe release takes place mechanistically differently to Fe reduction in shallow sediments, which typically fractionates Fe isotopes. We conclude that fermentation of organic matter involving interspecies electron transfer, partly through conductive Fe oxides, could play an important role.
Weitian Ding, Urumu Tsunogai, Tianzheng Huang, Takashi Sambuichi, Wenhua Ruan, Masanori Ito, Hao Xu, Yongwon Kim, and Fumiko Nakagawa
EGUsphere, https://doi.org/10.21203/rs.3.rs-4264720/v2, https://doi.org/10.21203/rs.3.rs-4264720/v2, 2025
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Identifying the pathways of N2O produced through nitrification and denitrification in soil is crucial for effective mitigation. Thus, we monitored a new natural isotopic signature (Δ17O) of N2O in forested soil for identifying the pathways, which is almost stable during various biogeochemical processes. Our results suggest Δ17O is a promising signature for identifying pathways of N2O production, revealing that increased denitrification drives the high emission of N2O in soil on rainy days.
Fawad Khan, Samuel Franco Luesma, Frederik Hartmann, Michael Dannenmann, Rainer Gasche, Clemens Scheer, Andreas Gattinger, Wiebke Niether, Elizabeth Gachibu Wangari, Ricky Mwangada Mwanake, Ralf Kiese, and Benjamin Wolf
EGUsphere, https://doi.org/10.5194/egusphere-2025-292, https://doi.org/10.5194/egusphere-2025-292, 2025
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Crop rotations with legumes and use of organic and mineral fertilizers show potential to reduce agricultural N losses. This study examined N losses, including direct N2 flux, on two adjacent sites with different management history: organic farming (OF) with legume cultivation and integrated farming (IF) using synthetic and organic N inputs. IF increased soil organic carbon and nitrogen content, 15N recovery and showed a balanced N budget, i.e., more efficient N cycling compared to OF.
Ingrid Chanca, Ingeborg Levin, Susan Trumbore, Kita Macario, Jost Lavric, Carlos Alberto Quesada, Alessandro Carioca de Araújo, Cléo Quaresma Dias Júnior, Hella van Asperen, Samuel Hammer, and Carlos A. Sierra
Biogeosciences, 22, 455–472, https://doi.org/10.5194/bg-22-455-2025, https://doi.org/10.5194/bg-22-455-2025, 2025
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Assessing the net carbon (C) budget of the Amazon entails considering the magnitude and timing of C absorption and losses through respiration (transit time of C). Radiocarbon-based estimates of the transit time of C in the Amazon Tall Tower Observatory (ATTO) suggest a change in the transit time from 6 ± 2 years and 18 ± 4 years within 2 years (October 2019 and December 2021, respectively). This variability indicates that only a fraction of newly fixed C can be stored for decades or longer.
Fortunat Joos, Sebastian Lienert, and Sönke Zaehle
Biogeosciences, 22, 19–39, https://doi.org/10.5194/bg-22-19-2025, https://doi.org/10.5194/bg-22-19-2025, 2025
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How plants regulate their exchange of CO2 and water with the atmosphere under global warming is critical for their carbon uptake and their cooling influence. We analyze the isotope ratio of atmospheric CO2 and detect no significant decadal trends in the seasonal cycle amplitude. The data are consistent with the regulation towards leaf CO2 and intrinsic water use efficiency growing proportionally to atmospheric CO2, in contrast to recent suggestions of downregulation of CO2 and water fluxes.
Stanislav Jabinski, Vítězslav Kučera, Marek Kopáček, Jan Jansa, and Travis B. Meador
EGUsphere, https://doi.org/10.5194/egusphere-2024-3153, https://doi.org/10.5194/egusphere-2024-3153, 2024
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Microbial production is a key parameter in estimations of organic matter cycling in environmental systems, and fungi play a major role as decomposers. In order to investigate fungal production and turnover times in soils, we incubated fungal pure cultures with isotopically labelled water and bicarbonate to investigate growth signals encoded into lipid biomarkers, which can be applied to improve flux estimates in environmental studies.
Weitian Ding, Urumu Tsunogai, and Fumiko Nakagawa
Biogeosciences, 21, 4717–4722, https://doi.org/10.5194/bg-21-4717-2024, https://doi.org/10.5194/bg-21-4717-2024, 2024
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Past studies have used the Δ17O of stream nitrate to estimate the gross nitrification rates (GNRs) in each forested catchment by approximating the Δ17O value of soil nitrate to be equal to that of stream nitrate. Based on inference and calculation of measured data, we found that this approximation resulted in an overestimated GNR. Therefore, it is essential to clarify and verify the Δ17O NO3− values in forested soils and streams before applying the Δ17O values of stream NO3− to GNR estimation.
Elise D. Rivett, Wenjuan Ma, Nathaniel E. Ostrom, and Eric L. Hegg
Biogeosciences, 21, 4549–4567, https://doi.org/10.5194/bg-21-4549-2024, https://doi.org/10.5194/bg-21-4549-2024, 2024
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Many different processes produce nitrous oxide (N2O), a potent greenhouse gas. Measuring the ratio of heavy and light nitrogen isotopes (15N/14N) for the non-exchangeable central and outer N atoms of N2O helps to distinguish sources of N2O. To accurately calculate the position-specific isotopic preference, we developed an expansion of the widely used Rayleigh model. Application of our new model to simulated and experimental data demonstrates its improved accuracy for analyzing N2O synthesis.
Eliza Harris, Philipp Fischer, Maciej P. Lewicki, Dominika Lewicka-Szczebak, Stephen J. Harris, and Fernando Perez-Cruz
Biogeosciences, 21, 3641–3663, https://doi.org/10.5194/bg-21-3641-2024, https://doi.org/10.5194/bg-21-3641-2024, 2024
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Greenhouse gases are produced and consumed via a number of pathways. Quantifying these pathways helps reduce the climate and environmental footprint of anthropogenic activities. The contribution of the pathways can be estimated from the isotopic composition, which acts as a fingerprint for these pathways. We have developed the Time-resolved FRactionation And Mixing Evaluation (TimeFRAME) model to simplify interpretation and estimate the contribution of different pathways and their uncertainty.
Kim A. P. Faassen, Jordi Vilà-Guerau de Arellano, Raquel González-Armas, Bert G. Heusinkveld, Ivan Mammarella, Wouter Peters, and Ingrid T. Luijkx
Biogeosciences, 21, 3015–3039, https://doi.org/10.5194/bg-21-3015-2024, https://doi.org/10.5194/bg-21-3015-2024, 2024
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The ratio between atmospheric O2 and CO2 can be used to characterize the carbon balance at the surface. By combining a model and observations from the Hyytiälä forest (Finland), we show that using atmospheric O2 and CO2 measurements from a single height provides a weak constraint on the surface CO2 exchange because large-scale processes such as entrainment confound this signal. We therefore recommend always using multiple heights of O2 and CO2 measurements to study surface CO2 exchange.
Nestor Gaviria-Lugo, Charlotte Läuchli, Hella Wittmann, Anne Bernhardt, Patrick Frings, Mahyar Mohtadi, Oliver Rach, and Dirk Sachse
Biogeosciences, 20, 4433–4453, https://doi.org/10.5194/bg-20-4433-2023, https://doi.org/10.5194/bg-20-4433-2023, 2023
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We analyzed how leaf wax hydrogen isotopes in continental and marine sediments respond to climate along one of the strongest aridity gradients in the world, from hyperarid to humid, along Chile. We found that under extreme aridity, the relationship between hydrogen isotopes in waxes and climate is non-linear, suggesting that we should be careful when reconstructing past hydrological changes using leaf wax hydrogen isotopes so as to avoid overestimating how much the climate has changed.
Ralf Conrad and Peter Claus
Biogeosciences, 20, 3625–3635, https://doi.org/10.5194/bg-20-3625-2023, https://doi.org/10.5194/bg-20-3625-2023, 2023
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Knowledge of carbon isotope fractionation is important for the assessment of the pathways involved in the degradation of organic matter. Propionate is an important intermediate. In the presence of sulfate, it was degraded by Syntrophobacter species via acetate to CO2. In the absence of sulfate, it was mainly consumed by Smithella and methanogenic archaeal species via butyrate and acetate to CH4. However, stable carbon isotope fractionation during the degradation process was quite small.
Alessandro Zanchetta, Linda M. J. Kooijmans, Steven van Heuven, Andrea Scifo, Hubertus A. Scheeren, Ivan Mammarella, Ute Karstens, Jin Ma, Maarten Krol, and Huilin Chen
Biogeosciences, 20, 3539–3553, https://doi.org/10.5194/bg-20-3539-2023, https://doi.org/10.5194/bg-20-3539-2023, 2023
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Carbonyl sulfide (COS) has been suggested as a tool to estimate carbon dioxide (CO2) uptake by plants during photosynthesis. However, understanding its sources and sinks is critical to preventing biases in this estimate. Combining observations and models, this study proves that regional sources occasionally influence the measurements at the 60 m tall Lutjewad tower (1 m a.s.l.; 53°24′ N, 6°21′ E) in the Netherlands. Moreover, it estimates nighttime COS fluxes to be −3.0 ± 2.6 pmol m−2 s−1.
Joel T. Bostic, David M. Nelson, and Keith N. Eshleman
Biogeosciences, 20, 2485–2498, https://doi.org/10.5194/bg-20-2485-2023, https://doi.org/10.5194/bg-20-2485-2023, 2023
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Land-use changes can affect water quality. We used tracers of pollution sources and water flow paths to show that an urban watershed exports variable sources during storm events relative to a less developed watershed. Our results imply that changing precipitation patterns combined with increasing urbanization may alter sources of pollution in the future.
Robin Havas, Christophe Thomazo, Miguel Iniesto, Didier Jézéquel, David Moreira, Rosaluz Tavera, Jeanne Caumartin, Elodie Muller, Purificación López-García, and Karim Benzerara
Biogeosciences, 20, 2405–2424, https://doi.org/10.5194/bg-20-2405-2023, https://doi.org/10.5194/bg-20-2405-2023, 2023
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Dissolved organic carbon (DOC) is a reservoir of prime importance in the C cycle of both continental and marine systems. It has also been suggested to influence the past Earth climate but is still poorly characterized in ancient-Earth-like environments. In this paper we show how DOC analyses from modern redox-stratified lakes can evidence specific metabolic reactions and environmental factors and how these can help us to interpret the C cycle of specific periods in the Earth's past.
Robin Havas, Christophe Thomazo, Miguel Iniesto, Didier Jézéquel, David Moreira, Rosaluz Tavera, Jeanne Caumartin, Elodie Muller, Purificación López-García, and Karim Benzerara
Biogeosciences, 20, 2347–2367, https://doi.org/10.5194/bg-20-2347-2023, https://doi.org/10.5194/bg-20-2347-2023, 2023
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We describe the C cycle of four modern stratified water bodies from Mexico, a necessary step to better understand the C cycle of primitive-Earth-like environments, which were dominated by these kinds of conditions. We highlight the importance of local external factors on the C cycle of these systems. Notably, they influence the sensitivity of the carbonate record to environmental changes. We also show the strong C-cycle variability among these lakes and their organic C sediment record.
Yifan Ma, Kuanbo Zhou, Weifang Chen, Junhui Chen, Jin-Yu Terence Yang, and Minhan Dai
Biogeosciences, 20, 2013–2030, https://doi.org/10.5194/bg-20-2013-2023, https://doi.org/10.5194/bg-20-2013-2023, 2023
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We distinguished particulate organic carbon (POC) export fluxes out of the nutrient-depleted layer (NDL) and the euphotic zone. The amount of POC export flux at the NDL base suggests that the NDL could be a hotspot of particle export. The substantial POC export flux at the NDL base challenges traditional concepts that the NDL was limited in terms of POC export. The dominant nutrient source for POC export fluxes should be subsurface nutrients, which was determined by 15N isotopic mass balance.
Clémence Paul, Clément Piel, Joana Sauze, Nicolas Pasquier, Frédéric Prié, Sébastien Devidal, Roxanne Jacob, Arnaud Dapoigny, Olivier Jossoud, Alexandru Milcu, and Amaëlle Landais
Biogeosciences, 20, 1047–1062, https://doi.org/10.5194/bg-20-1047-2023, https://doi.org/10.5194/bg-20-1047-2023, 2023
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To improve the interpretation of the δ18Oatm and Δ17O of O2 in air bubbles in ice cores, we need to better quantify the oxygen fractionation coefficients associated with biological processes. We performed a simplified analogue of the terrestrial biosphere in a closed chamber. We found a respiration fractionation in agreement with the previous estimates at the microorganism scale, and a terrestrial photosynthetic fractionation was found. This has an impact on the estimation of the Dole effect.
Adam Francis, Raja S. Ganeshram, Robyn E. Tuerena, Robert G. M. Spencer, Robert M. Holmes, Jennifer A. Rogers, and Claire Mahaffey
Biogeosciences, 20, 365–382, https://doi.org/10.5194/bg-20-365-2023, https://doi.org/10.5194/bg-20-365-2023, 2023
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Climate change is causing extensive permafrost degradation and nutrient releases into rivers with great ecological impacts on the Arctic Ocean. We focused on nitrogen (N) release from this degradation and associated cycling using N isotopes, an understudied area. Many N species are released at degradation sites with exchanges between species. N inputs from permafrost degradation and seasonal river N trends were identified using isotopes, helping to predict climate change impacts.
Mohamed Ayache, Jean-Claude Dutay, Kazuyo Tachikawa, Thomas Arsouze, and Catherine Jeandel
Biogeosciences, 20, 205–227, https://doi.org/10.5194/bg-20-205-2023, https://doi.org/10.5194/bg-20-205-2023, 2023
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The neodymium (Nd) is one of the most useful tracers to fingerprint water mass provenance. However, the use of Nd is hampered by the lack of adequate quantification of the external sources. Here, we present the first simulation of dissolved Nd concentration and Nd isotopic composition in the Mediterranean Sea using a high-resolution model. We aim to better understand how the various external sources affect the Nd cycle and particularly assess how it is impacted by atmospheric inputs.
Marta Santos-Garcia, Raja S. Ganeshram, Robyn E. Tuerena, Margot C. F. Debyser, Katrine Husum, Philipp Assmy, and Haakon Hop
Biogeosciences, 19, 5973–6002, https://doi.org/10.5194/bg-19-5973-2022, https://doi.org/10.5194/bg-19-5973-2022, 2022
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Terrestrial sources of nitrate are important contributors to the nutrient pool in the fjords of Kongsfjorden and Rijpfjorden in Svalbard during the summer, and they sustain most of the fjord primary productivity. Ongoing tidewater glacier retreat is postulated to favour light limitation and less dynamic circulation in fjords. This is suggested to encourage the export of nutrients to the middle and outer part of the fjord system, which may enhance primary production within and in offshore areas.
Marlene Dordoni, Michael Seewald, Karsten Rinke, Kurt Friese, Robert van Geldern, Jakob Schmidmeier, and Johannes A. C. Barth
Biogeosciences, 19, 5343–5355, https://doi.org/10.5194/bg-19-5343-2022, https://doi.org/10.5194/bg-19-5343-2022, 2022
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Organic matter (OM) turnover into dissolved inorganic carbon (DIC) was investigated by means of carbon isotope mass balances in Germany's largest water reservoir. This includes a metalimnetic oxygen minimum (MOM). Autochthonous particulate organic carbon (POC) was the main contributor to DIC, with rates that were highest for the MOM. Generally low turnover rates outline the environmental fragility of this water body in the case that OM loads increase due to storm events or land use changes.
Frédérique M. S. A. Kirkels, Hugo J. de Boer, Paulina Concha Hernández, Chris R. T. Martes, Marcel T. J. van der Meer, Sayak Basu, Muhammed O. Usman, and Francien Peterse
Biogeosciences, 19, 4107–4127, https://doi.org/10.5194/bg-19-4107-2022, https://doi.org/10.5194/bg-19-4107-2022, 2022
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The distinct carbon isotopic values of C3 and C4 plants are widely used to reconstruct past hydroclimate, where more C3 plants reflect wetter and C4 plants drier conditions. Here we examine the impact of regional hydroclimatic conditions on plant isotopic values in the Godavari River basin, India. We find that it is crucial to identify regional plant isotopic values and consider drought stress, which introduces a bias in C3 / C4 plant estimates and associated hydroclimate reconstructions.
Mhlangabezi Mdutyana, Tanya Marshall, Xin Sun, Jessica M. Burger, Sandy J. Thomalla, Bess B. Ward, and Sarah E. Fawcett
Biogeosciences, 19, 3425–3444, https://doi.org/10.5194/bg-19-3425-2022, https://doi.org/10.5194/bg-19-3425-2022, 2022
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Nitrite-oxidizing bacteria in the winter Southern Ocean show a high affinity for nitrite but require a minimum (i.e., "threshold") concentration before they increase their rates of nitrite oxidation significantly. The classic Michaelis–Menten model thus cannot be used to derive the kinetic parameters, so a modified equation was employed that also yields the threshold nitrite concentration. Dissolved iron availability may play an important role in limiting nitrite oxidation.
Weitian Ding, Urumu Tsunogai, Fumiko Nakagawa, Takashi Sambuichi, Hiroyuki Sase, Masayuki Morohashi, and Hiroki Yotsuyanagi
Biogeosciences, 19, 3247–3261, https://doi.org/10.5194/bg-19-3247-2022, https://doi.org/10.5194/bg-19-3247-2022, 2022
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Excessive leaching of nitrate from forested catchments during storm events degrades water quality and causes eutrophication in downstream areas. Thus, tracing the source of nitrate increase during storm events in forested streams is important for sustainable forest management. Based on the isotopic compositions of stream nitrate, including Δ17O, this study clarifies that the source of stream nitrate increase during storm events was soil nitrate in the riparian zone.
Nicolas Séon, Romain Amiot, Guillaume Suan, Christophe Lécuyer, François Fourel, Fabien Demaret, Arnauld Vinçon-Laugier, Sylvain Charbonnier, and Peggy Vincent
Biogeosciences, 19, 2671–2681, https://doi.org/10.5194/bg-19-2671-2022, https://doi.org/10.5194/bg-19-2671-2022, 2022
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We analysed the oxygen isotope composition of bones and teeth of four marine species possessing regional heterothermies. We observed a consistent link between oxygen isotope composition and temperature heterogeneities recorded by classical methods. This opens up new perspectives on the determination of the thermoregulatory strategies of extant marine vertebrates where conventional methods are difficult to apply, but also allows us to investigate thermophysiologies of extinct vertebrates.
Yuwei Liu, Guofeng Zhu, Zhuanxia Zhang, Zhigang Sun, Leilei Yong, Liyuan Sang, Lei Wang, and Kailiang Zhao
Biogeosciences, 19, 877–889, https://doi.org/10.5194/bg-19-877-2022, https://doi.org/10.5194/bg-19-877-2022, 2022
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We took the water cycle process of soil–plant–atmospheric precipitation as the research objective. In the water cycle of soil–plant–atmospheric precipitation, precipitation plays the main controlling role. The main source of replenishment for alpine meadow plants is precipitation and alpine meltwater; the main source of replenishment for forest plants is soil water; and the plants in the arid foothills mainly use groundwater.
Roberto Velázquez-Ochoa, María Julia Ochoa-Izaguirre, and Martín Federico Soto-Jiménez
Biogeosciences, 19, 1–27, https://doi.org/10.5194/bg-19-1-2022, https://doi.org/10.5194/bg-19-1-2022, 2022
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Our research is the first approximation to understand the δ13C macroalgal variability in one of the most diverse marine ecosystems in the world, the Gulf of California. The life-form is the principal cause of δ13C macroalgal variability, mainly taxonomy. However, changes in habitat characteristics and environmental conditions also influence the δ13C macroalgal variability. The δ13C macroalgae is indicative of carbon concentration mechanisms and isotope discrimination during carbon assimilation.
Raquel F. Flynn, Thomas G. Bornman, Jessica M. Burger, Shantelle Smith, Kurt A. M. Spence, and Sarah E. Fawcett
Biogeosciences, 18, 6031–6059, https://doi.org/10.5194/bg-18-6031-2021, https://doi.org/10.5194/bg-18-6031-2021, 2021
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Biological activity in the shallow Weddell Sea affects the biogeochemistry of recently formed deep waters. To investigate the drivers of carbon and nutrient export, we measured rates of primary production and nitrogen uptake, characterized the phytoplankton community, and estimated nutrient depletion ratios across the under-sampled western Weddell Sea in mid-summer. Carbon export was highest at the ice shelves and was determined by a combination of physical, chemical, and biological factors.
Stéphanie H. M. Jacquet, Christian Tamburini, Marc Garel, Aurélie Dufour, France Van Vambeke, Frédéric A. C. Le Moigne, Nagib Bhairy, and Sophie Guasco
Biogeosciences, 18, 5891–5902, https://doi.org/10.5194/bg-18-5891-2021, https://doi.org/10.5194/bg-18-5891-2021, 2021
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We compared carbon remineralization rates (MRs) in the western and central Mediterranean Sea in late spring during the PEACETIME cruise, as assessed using the barium tracer. We reported higher and deeper (up to 1000 m depth) MRs in the western basin, potentially sustained by an additional particle export event driven by deep convection. The central basin is the site of a mosaic of blooming and non-blooming water masses and showed lower MRs that were restricted to the upper mesopelagic layer.
Shinsuke Kawagucci, Yohei Matsui, Akiko Makabe, Tatsuhiro Fukuba, Yuji Onishi, Takuro Nunoura, and Taichi Yokokawa
Biogeosciences, 18, 5351–5362, https://doi.org/10.5194/bg-18-5351-2021, https://doi.org/10.5194/bg-18-5351-2021, 2021
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Hydrogen and carbon isotope ratios of methane as well as the relevant biogeochemical parameters and microbial community compositions in hydrothermal plumes in the Okinawa Trough were observed. We succeeded in simultaneously determining hydrogen and carbon isotope fractionation factors associated with aerobic oxidation of methane in seawater (εH = 49.4 ± 5.0 ‰, εC = 5.2 ± 0.4 ‰) – the former being the first of its kind ever reported.
Nicolai Schleinkofer, David Evans, Max Wisshak, Janina Vanessa Büscher, Jens Fiebig, André Freiwald, Sven Härter, Horst R. Marschall, Silke Voigt, and Jacek Raddatz
Biogeosciences, 18, 4733–4753, https://doi.org/10.5194/bg-18-4733-2021, https://doi.org/10.5194/bg-18-4733-2021, 2021
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We have measured the chemical composition of the carbonate shells of the parasitic foraminifera Hyrrokkin sarcophaga in order to test if it is influenced by the host organism (bivalve or coral). We find that both the chemical and isotopic composition is influenced by the host organism. For example strontium is enriched in foraminifera that grew on corals, whose skeleton is built from aragonite, which is naturally enriched in strontium compared to the bivalves' calcite shell.
Lena Rohe, Traute-Heidi Anderson, Heinz Flessa, Anette Goeske, Dominika Lewicka-Szczebak, Nicole Wrage-Mönnig, and Reinhard Well
Biogeosciences, 18, 4629–4650, https://doi.org/10.5194/bg-18-4629-2021, https://doi.org/10.5194/bg-18-4629-2021, 2021
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This is the first experimental setup combining a complex set of methods (microbial inhibitors and isotopic approaches) to differentiate between N2O produced by fungi or bacteria during denitrification in three soils. Quantifying the fungal fraction with inhibitors was not successful due to large amounts of uninhibited N2O production. All successful methods suggested a small or missing fungal contribution. Artefacts occurring with microbial inhibition to determine N2O fluxes are discussed.
Inga Köhler, Raul E. Martinez, David Piatka, Achim J. Herrmann, Arianna Gallo, Michelle M. Gehringer, and Johannes A. C. Barth
Biogeosciences, 18, 4535–4548, https://doi.org/10.5194/bg-18-4535-2021, https://doi.org/10.5194/bg-18-4535-2021, 2021
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We investigated how high Fe(II) levels influence the O2 budget of a circum-neutral Fe(II)-rich spring and if a combined study of dissolved O (DO) and its isotopic composition can help assess this effect. We showed that dissolved Fe(II) can exert strong effects on the δ18ODO even though a constant supply of atmospheric O2 occurs. In the presence of photosynthesis, direct effects of Fe oxidation become masked. Critical Fe(II) concentrations indirectly control the DO by enhancing photosynthesis.
Owen A. Sherwood, Samuel H. Davin, Nadine Lehmann, Carolyn Buchwald, Evan N. Edinger, Moritz F. Lehmann, and Markus Kienast
Biogeosciences, 18, 4491–4510, https://doi.org/10.5194/bg-18-4491-2021, https://doi.org/10.5194/bg-18-4491-2021, 2021
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Pacific water flowing eastward through the Canadian Arctic plays an important role in redistributing nutrients to the northwest Atlantic Ocean. Using samples collected from northern Baffin Bay to the southern Labrador Shelf, we show that stable isotopic ratios in seawater nitrate reflect the fraction of Pacific to Atlantic water. These results provide a new framework for interpreting patterns of nitrogen isotopic variability recorded in modern and archival organic materials in the region.
Franziska Slotta, Lukas Wacker, Frank Riedel, Karl-Uwe Heußner, Kai Hartmann, and Gerhard Helle
Biogeosciences, 18, 3539–3564, https://doi.org/10.5194/bg-18-3539-2021, https://doi.org/10.5194/bg-18-3539-2021, 2021
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The African baobab is a challenging climate and environmental archive for its semi-arid habitat due to dating uncertainties and parenchyma-rich wood anatomy. Annually resolved F14C data of tree-ring cellulose (1941–2005) from a tree in Oman show the annual character of the baobab’s growth rings but were up to 8.8 % lower than expected for 1964–1967. Subseasonal δ13C and δ18O patterns reveal years with low average monsoon rain as well as heavy rainfall events from pre-monsoonal cyclones.
Peter M. J. Douglas, Emerald Stratigopoulos, Sanga Park, and Dawson Phan
Biogeosciences, 18, 3505–3527, https://doi.org/10.5194/bg-18-3505-2021, https://doi.org/10.5194/bg-18-3505-2021, 2021
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Hydrogen isotopes could be a useful tool to help resolve the geographic distribution of methane emissions from freshwater environments. We analyzed an expanded global dataset of freshwater methane hydrogen isotope ratios and found significant geographic variation linked to water isotopic composition. This geographic variability could be used to resolve changing methane fluxes from freshwater environments and provide more accurate estimates of the relative balance of global methane sources.
Veronica R. Rollinson, Julie Granger, Sydney C. Clark, Mackenzie L. Blanusa, Claudia P. Koerting, Jamie M. P. Vaudrey, Lija A. Treibergs, Holly C. Westbrook, Catherine M. Matassa, Meredith G. Hastings, and Craig R. Tobias
Biogeosciences, 18, 3421–3444, https://doi.org/10.5194/bg-18-3421-2021, https://doi.org/10.5194/bg-18-3421-2021, 2021
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We measured nutrients and the naturally occurring nitrogen (N) and oxygen (O) stable isotope ratios of nitrate discharged from a New England river over an annual cycle, to monitor N loading and identify dominant sources from the watershed. We uncovered a seasonality to loading and sources of N from the watershed. Seasonality in the nitrate isotope ratios also informed on N cycling, conforming to theoretical expectations of riverine nutrient cycling.
Zixun Chen, Xuejun Liu, Xiaoqing Cui, Yaowen Han, Guoan Wang, and Jiazhu Li
Biogeosciences, 18, 2859–2870, https://doi.org/10.5194/bg-18-2859-2021, https://doi.org/10.5194/bg-18-2859-2021, 2021
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δ13C in plants is a sensitive long-term indicator of physiological acclimatization. The present study suggests that precipitation change and increasing atmospheric N deposition have little impact on δ13C of H. ammodendron, a dominant plant in central Asian deserts, but affect its gas exchange. In addition, this study shows that δ13C of H. ammodendron could not indicate its water use efficiency (WUE), suggesting that whether δ13C of C4 plants indicates WUE is species-specific.
Petra Zahajská, Carolina Olid, Johanna Stadmark, Sherilyn C. Fritz, Sophie Opfergelt, and Daniel J. Conley
Biogeosciences, 18, 2325–2345, https://doi.org/10.5194/bg-18-2325-2021, https://doi.org/10.5194/bg-18-2325-2021, 2021
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The drivers of high accumulation of single-cell siliceous algae (diatoms) in a high-latitude lake have not been fully characterized before. We studied silicon cycling of the lake through water, radon, silicon, and stable silicon isotope balances. Results showed that groundwater brings 3 times more water and dissolved silica than the stream inlet. We demonstrate that groundwater discharge and low sediment deposition have driven the high diatom accumulation in the studied lake in the past century.
Yu-Te Hsieh, Walter Geibert, E. Malcolm S. Woodward, Neil J. Wyatt, Maeve C. Lohan, Eric P. Achterberg, and Gideon M. Henderson
Biogeosciences, 18, 1645–1671, https://doi.org/10.5194/bg-18-1645-2021, https://doi.org/10.5194/bg-18-1645-2021, 2021
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The South Atlantic near 40° S is one of the high-productivity and most dynamic nutrient regions in the oceans, but the sources and fluxes of trace elements (TEs) to this region remain unclear. This study investigates seawater Ra-228 and provides important constraints on ocean mixing and dissolved TE fluxes to this region. Vertical mixing is a more important source than aeolian or shelf inputs in this region, but particulate or winter deep-mixing inputs may be required to balance the TE budgets.
Zhongjie Yu and Emily M. Elliott
Biogeosciences, 18, 805–829, https://doi.org/10.5194/bg-18-805-2021, https://doi.org/10.5194/bg-18-805-2021, 2021
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In this study, we demonstrated distinct nitrogen isotope effects for nitric oxide (NO) production from major microbial and chemical NO sources in an agricultural soil. These results highlight characteristic bond-forming and breaking mechanisms associated with microbial and chemical NO production and implicate that simultaneous isotopic analyses of NO and nitrous oxide (N2O) can lead to unprecedented insights into the sources and processes controlling NO and N2O emissions from agricultural soils.
Daniel A. Frick, Rainer Remus, Michael Sommer, Jürgen Augustin, Danuta Kaczorek, and Friedhelm von Blanckenburg
Biogeosciences, 17, 6475–6490, https://doi.org/10.5194/bg-17-6475-2020, https://doi.org/10.5194/bg-17-6475-2020, 2020
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Silicon is taken up by some plants to increase structural stability and to develop stress resistance and is rejected by others. To explore the underlying mechanisms, we used the stable isotopes of silicon that shift in their relative abundance depending on the biochemical transformation involved. On species with a rejective (tomato, mustard) and active (wheat) uptake mechanism, grown in hydroculture, we found that the transport of silicic acid is controlled by the precipitation of biogenic opal.
Quentin Charbonnier, Julien Bouchez, Jérôme Gaillardet, and Éric Gayer
Biogeosciences, 17, 5989–6015, https://doi.org/10.5194/bg-17-5989-2020, https://doi.org/10.5194/bg-17-5989-2020, 2020
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The abundance and isotope composition of the trace metal barium (Ba) allows us to track and quantify nutrient cycling throughout the Amazon Basin. In particular, we show that the Ba biological fingerprint evolves from that of a strong net nutrient uptake in the mountainous area of the Andes towards efficient nutrient recycling on the plains of the Lower Amazon. Our study highlights the fact that the geochemical signature of rock-derived nutrients transported by the Amazon is scarred by life.
Ajinkya G. Deshpande, Thomas W. Boutton, Ayumi Hyodo, Charles W. Lafon, and Georgianne W. Moore
Biogeosciences, 17, 5639–5653, https://doi.org/10.5194/bg-17-5639-2020, https://doi.org/10.5194/bg-17-5639-2020, 2020
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Wetland forests in the southern USA are threatened by changing climate and human-induced pressures. We used tree ring widths and C isotopes as indicators of forest growth and physiological stress, respectively, and compared these to past climate data. We observed that vegetation growing in the drier patches is susceptible to stress, while vegetation growth and physiology in wetter patches is less sensitive to unfavorable environmental conditions, highlighting the importance of optimal wetness.
Dominika Lewicka-Szczebak, Maciej Piotr Lewicki, and Reinhard Well
Biogeosciences, 17, 5513–5537, https://doi.org/10.5194/bg-17-5513-2020, https://doi.org/10.5194/bg-17-5513-2020, 2020
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We present the first validation of N2O isotopic approaches for estimating N2O source pathways and N2O reduction. These approaches are widely used for tracing soil nitrogen cycling, but the results of these estimations are very uncertain. Here we report the results from parallel treatments allowing for precise validation of these approaches, and we propose the best strategies for results interpretation, including the new idea of an isotope model integrating three isotopic signatures of N2O.
Markus Raitzsch, Claire Rollion-Bard, Ingo Horn, Grit Steinhoefel, Albert Benthien, Klaus-Uwe Richter, Matthieu Buisson, Pascale Louvat, and Jelle Bijma
Biogeosciences, 17, 5365–5375, https://doi.org/10.5194/bg-17-5365-2020, https://doi.org/10.5194/bg-17-5365-2020, 2020
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The isotopic composition of boron in carbonate shells of marine unicellular organisms is a popular tool to estimate seawater pH. Usually, many shells need to be dissolved and measured for boron isotopes, but the information on their spatial distribution is lost. Here, we investigate two techniques that allow for measuring boron isotopes within single shells and show that they yield robust mean values but provide additional information on the heterogeneity within and between single shells.
Florian Einsiedl, Anja Wunderlich, Mathieu Sebilo, Ömer K. Coskun, William D. Orsi, and Bernhard Mayer
Biogeosciences, 17, 5149–5161, https://doi.org/10.5194/bg-17-5149-2020, https://doi.org/10.5194/bg-17-5149-2020, 2020
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Nitrate pollution of freshwaters and methane emissions into the atmosphere are crucial factors in deteriorating the quality of drinking water and in contributing to global climate change. Here, we report vertical concentration and stable isotope profiles of CH4, NO3-, NO2-, and NH4+ in the water column of Fohnsee (southern Bavaria, Germany) that may indicate linkages between nitrate-dependent anaerobic methane oxidation and the anaerobic oxidation of ammonium.
Ruifang C. Xie, Frédéric A. C. Le Moigne, Insa Rapp, Jan Lüdke, Beat Gasser, Marcus Dengler, Volker Liebetrau, and Eric P. Achterberg
Biogeosciences, 17, 4919–4936, https://doi.org/10.5194/bg-17-4919-2020, https://doi.org/10.5194/bg-17-4919-2020, 2020
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Thorium-234 (234Th) is widely used to study carbon fluxes from the surface ocean to depth. But few studies stress the relevance of oceanic advection and diffusion on the downward 234Th fluxes in nearshore environments. Our study in offshore Peru showed strong temporal variations in both the importance of physical processes on 234Th flux estimates and the oceanic residence time of 234Th, whereas salinity-derived seawater 238U activities accounted for up to 40 % errors in 234Th flux estimates.
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Short summary
We present a new technique to label organic matter (OM) at its place of formation by the application of 13C, 18O and 2H through the gaseous phase. The label diffused into leaves was incorporated into assimilates and was detected in plant tissues. This technique can be applied in soil sciences, e.g. to trace the decomposition pathways of soil OM inputs, or in plant physiology and palaeoclimatic reconstruction, e.g. to further investigate the origin of the 18O and 2H signal in tree ring cellulose.
We present a new technique to label organic matter (OM) at its place of formation by the...
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